Prupe.3G292800_v2.0.a1

Glucose-6-phosphate 1-epimerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000789
Physical Location & Seq
Forward (+)
26197307 .. 26200145
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G292800.1

Sequence Viewer

Length: 921 bp
ATGCCGTTGAATTTAGTACATGATGGTAATGGATTTTCCCGAATCATACTCACGGAGCCAACTGGGTCTTCAGCAGAGGTGCTTCTGTACGGTGGGCAGGTTGTTTCGTGGAAGAACGAAAGACGAGAAGAACTGCTCTTTATGAGTAGCAAGGCTATTTGGAAACCAACTAAAGCCATCAGGGGAGGCATACCTGTCTGCTTTCCACAGTTTGGAAATCTTGGTTCACTGGAGCAGCACGGATTCGCAAGGAACAGATTGTGGTCACTAGATAATGACCCCTCACCTTTGCCTCCAACTAACAATCAGTCATCAGTGGATTTGATCTTGAAGTCTGCTGAAGAGGATCTGAAGACCTGGCCACGTAGCTTTGAGTTGCGGCTTCGTATTTCTCTCAGTGCTGGCAAGCTCACTTTGATTCCCCGTGTTAGAAATACGGATAGCAAGGCGTTCTCCTTTACCTTTGCCCTGAGTAACTACTTGTCTGTATCAGATATCAGTGAAGTGCGTGTTGAGGGCTTGGAGACACTTGATTATTTCGACAATCTGGCGCGTAGAGAAAGGTTCACGGAGCAGGCAGATGCTATTACCTTTGATGGCGAGGTCAACAGAGTGTATTTGGACACCCCAACTAAGATAGCCATGATAGACCATGAGAAGAAGAGAACGTTTGTTCTGCGGAAGGATGGCATGCCAGATGCAGTTGTCTGGAACCCTTGGGACAAAAAGACCAAGACTGTCCCTGATTTGGGGGTTGAGGACTACAAAACCATGTTATGTGTAGATTCTGCAGCCATCGAAACCCCAATTGTGTTGAAGCCTTTCGAAGAGTGGAAAGGCCGTCAAGAACTCTCTACTGTTTCATCAAGCTATTGCAGTGGGCAGTTGGATCCTCGCAAGGTGCTTCATGGCTTTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

307

Amino Acids

34.62

Weight (kDa)

6.26

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 88
AccB7I CCANNNNNTGG 1 cut(s) 212
AccII CGCG 1 cut(s) 553
AciI CCGC 2 cut(s) 379, 679
AclI AACGTT 1 cut(s) 668
AclWI GGATC 3 cut(s) 354, 884, 897
AcoI YGGCCR 1 cut(s) 359
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 3 cut(s) 54, 360, 371
AfaI GTAC 2 cut(s) 18, 89
AfiI CCNNNNNNNGG 3 cut(s) 212, 748, 749
AgsI TTSAA 3 cut(s) 10, 331, 817
AjnI CCWGG 1 cut(s) 356
AjuI GAANNNNNNNTTGG 2 cut(s) 52, 84
AluBI AGCT 3 cut(s) 369, 409, 870
AluI AGCT 3 cut(s) 369, 409, 870
Alw26I GTCTC 1 cut(s) 518
AlwI GGATC 3 cut(s) 354, 884, 897
AoxI GGCC 2 cut(s) 359, 838
ApeKI GCWGC 2 cut(s) 235, 791
ApoI RAATTY 1 cut(s) 10
Asp700I GAANNNNTTC 1 cut(s) 821
AspLEI GCGC 1 cut(s) 553
AsuHPI GGTGA 1 cut(s) 276
AsuII TTCGAA 1 cut(s) 825
BalI TGGCCA 1 cut(s) 361
BamHI GGATCC 1 cut(s) 889
BbsI GAAGAC 2 cut(s) 60, 359
BbvI GCAGC 2 cut(s) 247, 803
BccI CCATC 5 cut(s) 17, 185, 590, 680, 803
BceAI ACGGC 1 cut(s) 825
BciT130I CCWGG 1 cut(s) 358
BcoDI GTCTC 1 cut(s) 518
BfaI CTAG 1 cut(s) 269
BfmI CTRYAG 1 cut(s) 789
BfuAI ACCTGC 1 cut(s) 88
BisI GCNGC 3 cut(s) 236, 380, 792
BlsI GCNGC 3 cut(s) 237, 381, 793
Bme1390I CCNGG 1 cut(s) 358
BmiI GGNNCC 3 cut(s) 57, 713, 891
BmrFI CCNGG 1 cut(s) 358
BmrI ACTGGG 1 cut(s) 72
BmsI GCATC 2 cut(s) 571, 688
BmuI ACTGGG 1 cut(s) 72
BpiI GAAGAC 2 cut(s) 60, 359
BpmI CTGGAG 1 cut(s) 251
Bpu14I TTCGAA 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 365
BsaJI CCNNGG 1 cut(s) 716
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 748, 749
Bse1I ACTGG 2 cut(s) 67, 234
BseBI CCWGG 1 cut(s) 358
BseDI CCNNGG 1 cut(s) 716
BseGI GGATG 1 cut(s) 691
BseLI CCNNNNNNNGG 3 cut(s) 212, 748, 749
BseMII CTCAG 2 cut(s) 409, 461
BseNI ACTGG 2 cut(s) 67, 234
BseXI GCAGC 2 cut(s) 247, 803
Bsh1236I CGCG 1 cut(s) 553
BshFI GGCC 2 cut(s) 361, 840
BslFI GGGAC 2 cut(s) 725, 734
BslI CCNNNNNNNGG 3 cut(s) 212, 748, 749
BsmAI GTCTC 1 cut(s) 518
BsmFI GGGAC 2 cut(s) 725, 734
BsnI GGCC 2 cut(s) 361, 840
Bsp119I TTCGAA 1 cut(s) 825
Bsp143I GATC 3 cut(s) 324, 346, 889
BspACI CCGC 2 cut(s) 379, 679
BspANI GGCC 2 cut(s) 361, 840
BspCNI CTCAG 2 cut(s) 408, 462
BspFNI CGCG 1 cut(s) 553
BspLI GGNNCC 3 cut(s) 57, 713, 891
BspMAI CTGCAG 1 cut(s) 793
BspMI ACCTGC 1 cut(s) 88
BspPI GGATC 3 cut(s) 354, 884, 897
BspT104I TTCGAA 1 cut(s) 825
BsrI ACTGG 2 cut(s) 67, 234
BssECI CCNNGG 1 cut(s) 716
BssMI GATC 3 cut(s) 324, 346, 889
BssT1I CCWWGG 1 cut(s) 716
Bst2UI CCWGG 1 cut(s) 358
Bst4CI ACNGT 4 cut(s) 92, 210, 739, 859
Bst6I CTCTTC 3 cut(s) 336, 656, 822
BstBAI YACGTR 1 cut(s) 365
BstBI TTCGAA 1 cut(s) 825
BstC8I GCNNGC 4 cut(s) 403, 407, 576, 692
BstDEI CTNAG 3 cut(s) 395, 470, 633
BstF5I GGATG 1 cut(s) 691
BstFNI CGCG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 553
BstKTI GATC 3 cut(s) 327, 349, 892
BstMAI GTCTC 1 cut(s) 518
BstMBI GATC 3 cut(s) 324, 346, 889
BstNI CCWGG 1 cut(s) 358
BstNSI RCATGY 1 cut(s) 694
BstSCI CCNGG 1 cut(s) 356
BstSFI CTRYAG 1 cut(s) 789
BstUI CGCG 1 cut(s) 553
BstV1I GCAGC 2 cut(s) 247, 803
BstV2I GAAGAC 2 cut(s) 60, 359
BstX2I RGATCY 2 cut(s) 346, 889
BstYI RGATCY 2 cut(s) 346, 889
BsuRI GGCC 2 cut(s) 361, 840
BtsCI GGATG 1 cut(s) 691
BtsI GCAGTG 1 cut(s) 883
BtsIMutI CAGTG 5 cut(s) 227, 321, 403, 505, 883
BveI ACCTGC 1 cut(s) 88
Cac8I GCNNGC 4 cut(s) 403, 407, 576, 692
CfoI GCGC 1 cut(s) 553
Csp6I GTAC 2 cut(s) 17, 88
CviAII CATG 6 cut(s) 20, 643, 653, 691, 772, 908
CviQI GTAC 2 cut(s) 17, 88
DdeI CTNAG 3 cut(s) 395, 470, 633
DpnI GATC 3 cut(s) 326, 348, 891
DpnII GATC 3 cut(s) 324, 346, 889
EaeI YGGCCR 1 cut(s) 359
Eam1104I CTCTTC 3 cut(s) 336, 656, 822
EarI CTCTTC 3 cut(s) 336, 656, 822
Eco130I CCWWGG 1 cut(s) 716
Eco32I GATATC 1 cut(s) 496
Eco57I CTGAAG 3 cut(s) 54, 360, 371
EcoRII CCWGG 1 cut(s) 356
EcoRV GATATC 1 cut(s) 496
EcoT14I CCWWGG 1 cut(s) 716
ErhI CCWWGG 1 cut(s) 716
FaeI CATG 6 cut(s) 23, 646, 656, 694, 775, 911
FaqI GGGAC 2 cut(s) 725, 734
FatI CATG 6 cut(s) 19, 642, 652, 690, 771, 907
Fnu4HI GCNGC 3 cut(s) 236, 380, 792
FokI GGATG 1 cut(s) 698
Fsp4HI GCNGC 3 cut(s) 236, 380, 792
FspBI CTAG 1 cut(s) 269
GlaI GCGC 1 cut(s) 552
GluI GCNGC 3 cut(s) 236, 380, 792
GsuI CTGGAG 1 cut(s) 251
HaeIII GGCC 2 cut(s) 361, 840
HhaI GCGC 1 cut(s) 553
Hin1II CATG 6 cut(s) 23, 646, 656, 694, 775, 911
Hin6I GCGC 1 cut(s) 551
HinP1I GCGC 1 cut(s) 551
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HinfI GANTC 4 cut(s) 42, 243, 418, 785
HphI GGTGA 1 cut(s) 276
Hpy166II GTNNAC 3 cut(s) 227, 567, 607
Hpy188I TCNGA 2 cut(s) 351, 493
Hpy188III TCNNGA 4 cut(s) 39, 328, 709, 845
Hpy8I GTNNAC 3 cut(s) 227, 567, 607
HpyAV CCTTC 1 cut(s) 676
HpyCH4III ACNGT 4 cut(s) 92, 210, 739, 859
HpyCH4IV ACGT 2 cut(s) 364, 668
HpyCH4V TGCA 3 cut(s) 701, 791, 876
HpyF3I CTNAG 3 cut(s) 395, 470, 633
HpySE526I ACGT 2 cut(s) 364, 668
Hsp92II CATG 6 cut(s) 23, 646, 656, 694, 775, 911
HspAI GCGC 1 cut(s) 551
Kzo9I GATC 3 cut(s) 324, 346, 889
LmnI GCTCC 3 cut(s) 55, 232, 571
Lsp1109I GCAGC 2 cut(s) 247, 803
LweI GCATC 2 cut(s) 571, 688
MaeI CTAG 1 cut(s) 269
MaeII ACGT 2 cut(s) 364, 668
MaeIII GTNAC 2 cut(s) 264, 473
MalI GATC 3 cut(s) 326, 348, 891
MboI GATC 3 cut(s) 324, 346, 889
MboII GAAGA 8 cut(s) 60, 124, 140, 353, 364, 670, 673, 839
MfeI CAATTG 1 cut(s) 807
MflI RGATCY 2 cut(s) 346, 889
MlsI TGGCCA 1 cut(s) 361
MluCI AATT 2 cut(s) 10, 807
MluNI TGGCCA 1 cut(s) 361
MmeI TCCRAC 2 cut(s) 320, 867
MnlI CCTC 9 cut(s) 70, 179, 292, 303, 337, 508, 595, 751, 903
Mox20I TGGCCA 1 cut(s) 361
MroXI GAANNNNTTC 1 cut(s) 821
MscI TGGCCA 1 cut(s) 361
Msp20I TGGCCA 1 cut(s) 361
MspR9I CCNGG 1 cut(s) 358
MunI CAATTG 1 cut(s) 807
MvaI CCWGG 1 cut(s) 358
MvnI CGCG 1 cut(s) 553
NdeII GATC 3 cut(s) 324, 346, 889
NlaIII CATG 6 cut(s) 23, 646, 656, 694, 775, 911
NlaIV GGNNCC 3 cut(s) 57, 713, 891
NmuCI GTSAC 1 cut(s) 264
NspI RCATGY 1 cut(s) 694
NspV TTCGAA 1 cut(s) 825
PaeI GCATGC 1 cut(s) 694
PdmI GAANNNNTTC 1 cut(s) 821
PfeI GAWTC 4 cut(s) 42, 243, 418, 785
PflMI CCANNNNNTGG 1 cut(s) 212
PkrI GCNGC 3 cut(s) 237, 381, 793
Ppu21I YACGTR 1 cut(s) 365
Psp1406I AACGTT 1 cut(s) 668
Psp6I CCWGG 1 cut(s) 356
PspGI CCWGG 1 cut(s) 356
PspN4I GGNNCC 3 cut(s) 57, 713, 891
PstI CTGCAG 1 cut(s) 793
PsuI RGATCY 2 cut(s) 346, 889
RsaI GTAC 2 cut(s) 18, 89
RsaNI GTAC 2 cut(s) 17, 88
SatI GCNGC 3 cut(s) 236, 380, 792
Sau3AI GATC 3 cut(s) 324, 346, 889
ScrFI CCNGG 1 cut(s) 358
SfaNI GCATC 2 cut(s) 571, 688
SfcI CTRYAG 1 cut(s) 789
SfuI TTCGAA 1 cut(s) 825
SphI GCATGC 1 cut(s) 694
Sse9I AATT 2 cut(s) 10, 807
SsiI CCGC 2 cut(s) 379, 679
SspMI CTAG 1 cut(s) 269
StyD4I CCNGG 1 cut(s) 356
StyI CCWWGG 1 cut(s) 716
TaaI ACNGT 4 cut(s) 92, 210, 739, 859
TaiI ACGT 2 cut(s) 367, 671
TaqI TCGA 3 cut(s) 540, 798, 825
TasI AATT 2 cut(s) 10, 807
TatI WGTACW 1 cut(s) 16
TauI GCSGC 1 cut(s) 382
TfiI GAWTC 4 cut(s) 42, 243, 418, 785
TscAI CASTG 5 cut(s) 234, 321, 403, 505, 883
TseFI GTSAC 1 cut(s) 264
TseI GCWGC 2 cut(s) 235, 791
Tsp45I GTSAC 1 cut(s) 264
TspDTI ATGAA 2 cut(s) 852, 896
TspGWI ACGGA 4 cut(s) 68, 255, 452, 584
TspRI CASTG 5 cut(s) 234, 321, 403, 505, 883
Van91I CCANNNNNTGG 1 cut(s) 212
XapI RAATTY 1 cut(s) 10
XceI RCATGY 1 cut(s) 694
XmnI GAANNNNTTC 1 cut(s) 821
XspI CTAG 1 cut(s) 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.