Prupe.1G081500_v2.0.a1

Belongs to the glucose-6-phosphate 1-epimerase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000789
Physical Location & Seq
Forward (+)
5985880 .. 5992195
6316 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G081500.2

Sequence Viewer

Length: 1056 bp
ATGAGTAGCGATAAGGCTCCCATTGCTGCTGCTTCTGCTTCTGCTGCTGTAGCCACCAATGCGTTGAGTGGTAGTAGCGGCAGTGGCGGTGTTGCTGCTGCTAATGCCAATGCGAAGCTTCTTCATCCTGGCGCTGAATTCAGCAAGGGCATCAATGGCCTCGACAAGGTCGTCCTCCGTGATCCGCGCGGCAGTGTCGCCGAGGTGTATTTGTATGGGGGTCATGTAACATCATGGAAGAATGATCATGGAGAGGAATTGCTATTTGTTAGCAGCAAGGCTATATTTAAGCCTCCAAAAGCTATTCGTGGGGGAATCCCAATATGCTTTCCTCAGTTTTCAAATCTTGGTTCTCTTGATGCACATGGATTTGCTAGAAACAGATTTTGGAGCATTGACTCTGATCCATCTCCTTTTCCAACAAATACCTCCAATAAGGTTGCTGTTGATTTGATCCTTAGGCCTAATGAAGAAGATATGAAGACCTGGCCTCACAGTTATGAGTACCGACTACGGGTAGCTTTGGGACCTGGAGGAGATCTGACGTTGATATCTCGCATCAGGAATACTAACTCTGATGGAAAGCCATTCTCGTTCACATTTGCATATCACACTTATTTCTCTGTTTCAGATATCAGTGAAGTTCGTGTAGAAGGATTGGAGACCTTGGATTATCTTGACAACTTGCAGAACAGGAAACGTTGCACTGAACAAGGTGATGCTATAACATTTGAATCAGAGGTTGACAAAATATATCTCAGCACTCCTACAAAGATTGCAATTTTGGATCATGAGAAGAAGAGAACATTTGTAATACGCAAAGATGGTCTTCCAGATGCTGTGGTGTGGAATCCCTGGGATAAGAAGTCGAAAGCTATGGCTGATTTTGGAGATGATGAGTACAAGCATATGCTGTGTGTGGAGACTGCTGCTATTGAGAAACCTATCACACTGAAACCTGGAGAGGAGTGGAGAGGAAGGCAGGAGCTTTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAACTTGATCCTCGAAAGGTTCTCCAGGGCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko01100 ko01110 ko01120 ko01130 map00010 map01100 map01110 map01120 map01130
Pfam Domains
Protein Families
Aldose_epim

Protein Analysis

352

Amino Acids

38.47

Weight (kDa)

6.47

Isoelectric Point (pI)

28.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 170
AccII CGCG 2 cut(s) 187, 189
AciI CCGC 4 cut(s) 78, 87, 185, 189
AclI AACGTT 1 cut(s) 700
AclWI GGATC 5 cut(s) 176, 398, 448, 795, 1022
AcsI RAATTY 1 cut(s) 137
AfaI GTAC 2 cut(s) 506, 902
AfiI CCNNNNNNNGG 2 cut(s) 166, 514
AgsI TTSAA 2 cut(s) 342, 734
AjnI CCWGG 6 cut(s) 127, 485, 529, 854, 958, 1044
AjuI GAANNNNNNNTTGG 2 cut(s) 370, 402
AluBI AGCT 7 cut(s) 118, 302, 521, 875, 988, 995, 1053
AluI AGCT 7 cut(s) 118, 302, 521, 875, 988, 995, 1053
Alw26I GTCTC 2 cut(s) 656, 917
AlwI GGATC 5 cut(s) 176, 398, 448, 795, 1022
AlwNI CAGNNNCTG 2 cut(s) 839, 1011
AoxI GGCC 3 cut(s) 157, 461, 488
ApeKI GCWGC 8 cut(s) 26, 29, 44, 95, 98, 273, 929, 1050
ApoI RAATTY 1 cut(s) 137
AspLEI GCGC 2 cut(s) 134, 189
AspS9I GGNCC 1 cut(s) 527
AsuHPI GGTGA 1 cut(s) 728
AvaII GGWCC 1 cut(s) 527
AxyI CCTNAGG 1 cut(s) 458
BbsI GAAGAC 2 cut(s) 488, 821
BbvI GCAGC 7 cut(s) 13, 16, 31, 82, 85, 285, 916
BccI CCATC 3 cut(s) 415, 572, 818
BciT130I CCWGG 6 cut(s) 129, 487, 531, 856, 960, 1046
BclI TGATCA 1 cut(s) 244
BcoDI GTCTC 2 cut(s) 656, 917
BfaI CTAG 1 cut(s) 375
BfmI CTRYAG 2 cut(s) 48, 1012
BfoI RGCGCY 1 cut(s) 135
BglII AGATCT 1 cut(s) 538
Bme1390I CCNGG 6 cut(s) 129, 487, 531, 856, 960, 1046
Bme18I GGWCC 1 cut(s) 527
BmgT120I GGNCC 1 cut(s) 527
BmiI GGNNCC 2 cut(s) 18, 528
BmrFI CCNGG 6 cut(s) 129, 487, 531, 856, 960, 1046
BmsI GCATC 5 cut(s) 159, 349, 567, 709, 826
BpiI GAAGAC 2 cut(s) 488, 821
BpmI CTGGAG 3 cut(s) 552, 981, 1028
BsaI GGTCTC 1 cut(s) 656
BsaJI CCNNGG 5 cut(s) 201, 666, 854, 855, 1045
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 514
Bse1I ACTGG 1 cut(s) 1005
Bse21I CCTNAGG 1 cut(s) 458
Bse3DI GCAATG 1 cut(s) 21
BseBI CCWGG 6 cut(s) 129, 487, 531, 856, 960, 1046
BseDI CCNNGG 5 cut(s) 201, 666, 854, 855, 1045
BseGI GGATG 1 cut(s) 124
BseLI CCNNNNNNNGG 2 cut(s) 166, 514
BseMI GCAATG 1 cut(s) 21
BseMII CTCAG 2 cut(s) 347, 772
BseNI ACTGG 1 cut(s) 1005
BseRI GAGGAG 2 cut(s) 549, 980
BseXI GCAGC 7 cut(s) 13, 16, 31, 82, 85, 285, 916
Bsh1236I CGCG 2 cut(s) 187, 189
BshFI GGCC 3 cut(s) 159, 463, 490
BslFI GGGAC 1 cut(s) 540
BslI CCNNNNNNNGG 2 cut(s) 166, 514
BsmAI GTCTC 2 cut(s) 656, 917
BsmFI GGGAC 1 cut(s) 540
BsnI GGCC 3 cut(s) 159, 463, 490
Bso31I GGTCTC 1 cut(s) 656
Bsp143I GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
BspACI CCGC 4 cut(s) 78, 87, 185, 189
BspANI GGCC 3 cut(s) 159, 463, 490
BspCNI CTCAG 2 cut(s) 346, 771
BspFNI CGCG 2 cut(s) 187, 189
BspHI TCATGA 1 cut(s) 790
BspLI GGNNCC 2 cut(s) 18, 528
BspPI GGATC 5 cut(s) 176, 398, 448, 795, 1022
BspTNI GGTCTC 1 cut(s) 656
BsrDI GCAATG 1 cut(s) 21
BsrI ACTGG 1 cut(s) 1005
BssECI CCNNGG 5 cut(s) 201, 666, 854, 855, 1045
BssMI GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
BssT1I CCWWGG 1 cut(s) 666
Bst2UI CCWGG 6 cut(s) 129, 487, 531, 856, 960, 1046
Bst4CI ACNGT 2 cut(s) 497, 1013
Bst6I CTCTTC 1 cut(s) 794
BstDEI CTNAG 3 cut(s) 333, 458, 758
BstENI CCTNNNNNAGG 1 cut(s) 164
BstF5I GGATG 1 cut(s) 124
BstFNI CGCG 2 cut(s) 187, 189
BstH2I RGCGCY 1 cut(s) 135
BstHHI GCGC 2 cut(s) 134, 189
BstKTI GATC 7 cut(s) 184, 247, 406, 456, 541, 790, 1030
BstMAI GTCTC 2 cut(s) 656, 917
BstMBI GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
BstMWI GCNNNNNNNGC 8 cut(s) 23, 35, 44, 50, 59, 84, 104, 156
BstNI CCWGG 6 cut(s) 129, 487, 531, 856, 960, 1046
BstSCI CCNGG 6 cut(s) 127, 485, 529, 854, 958, 1044
BstSFI CTRYAG 2 cut(s) 48, 1012
BstUI CGCG 2 cut(s) 187, 189
BstV1I GCAGC 7 cut(s) 13, 16, 31, 82, 85, 285, 916
BstV2I GAAGAC 2 cut(s) 488, 821
BstX2I RGATCY 1 cut(s) 538
BstYI RGATCY 1 cut(s) 538
Bsu36I CCTNAGG 1 cut(s) 458
BsuRI GGCC 3 cut(s) 159, 463, 490
BtsCI GGATG 1 cut(s) 124
BtsI GCAGTG 2 cut(s) 88, 199
BtsIMutI CAGTG 5 cut(s) 88, 199, 643, 705, 950
CaiI CAGNNNCTG 2 cut(s) 839, 1011
CciI TCATGA 1 cut(s) 790
CfoI GCGC 2 cut(s) 134, 189
Cfr13I GGNCC 1 cut(s) 527
Csp6I GTAC 2 cut(s) 505, 901
CviAII CATG 5 cut(s) 224, 234, 248, 365, 791
CviQI GTAC 2 cut(s) 505, 901
DdeI CTNAG 3 cut(s) 333, 458, 758
DpnI GATC 7 cut(s) 183, 246, 405, 455, 540, 789, 1029
DpnII GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
DrdI GACNNNNNNGTC 1 cut(s) 170
DseDI GACNNNNNNGTC 1 cut(s) 170
Eam1104I CTCTTC 1 cut(s) 794
EarI CTCTTC 1 cut(s) 794
Eco130I CCWWGG 1 cut(s) 666
Eco147I AGGCCT 1 cut(s) 463
Eco31I GGTCTC 1 cut(s) 656
Eco32I GATATC 2 cut(s) 552, 634
Eco47I GGWCC 1 cut(s) 527
Eco81I CCTNAGG 1 cut(s) 458
EcoNI CCTNNNNNAGG 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 527
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 6 cut(s) 127, 485, 529, 854, 958, 1044
EcoRV GATATC 2 cut(s) 552, 634
EcoT14I CCWWGG 1 cut(s) 666
ErhI CCWWGG 1 cut(s) 666
FaeI CATG 5 cut(s) 227, 237, 251, 368, 794
FalI AAGNNNNNCTT 2 cut(s) 813, 845
FaqI GGGAC 1 cut(s) 540
FatI CATG 5 cut(s) 223, 233, 247, 364, 790
FauNDI CATATG 1 cut(s) 909
FbaI TGATCA 1 cut(s) 244
FokI GGATG 1 cut(s) 111
FspBI CTAG 1 cut(s) 375
GlaI GCGC 2 cut(s) 133, 188
GsuI CTGGAG 3 cut(s) 552, 981, 1028
HaeII RGCGCY 1 cut(s) 135
HaeIII GGCC 3 cut(s) 159, 463, 490
HhaI GCGC 2 cut(s) 134, 189
Hin1II CATG 5 cut(s) 227, 237, 251, 368, 794
Hin6I GCGC 2 cut(s) 132, 187
HinP1I GCGC 2 cut(s) 132, 187
HincII GTYRAC 1 cut(s) 745
HindII GTYRAC 1 cut(s) 745
HindIII AAGCTT 1 cut(s) 116
HinfI GANTC 4 cut(s) 315, 398, 734, 850
HphI GGTGA 1 cut(s) 728
Hpy166II GTNNAC 2 cut(s) 597, 745
Hpy188I TCNGA 5 cut(s) 403, 543, 577, 631, 739
Hpy188III TCNNGA 5 cut(s) 356, 562, 677, 791, 833
Hpy8I GTNNAC 2 cut(s) 597, 745
HpyAV CCTTC 3 cut(s) 647, 972, 1011
HpyCH4III ACNGT 2 cut(s) 497, 1013
HpyCH4IV ACGT 2 cut(s) 545, 700
HpyCH4V TGCA 5 cut(s) 362, 605, 688, 705, 779
HpyF10VI GCNNNNNNNGC 8 cut(s) 23, 35, 44, 50, 59, 84, 104, 156
HpyF3I CTNAG 3 cut(s) 333, 458, 758
HpySE526I ACGT 2 cut(s) 545, 700
Hsp92II CATG 5 cut(s) 227, 237, 251, 368, 794
HspAI GCGC 2 cut(s) 132, 187
Ksp22I TGATCA 1 cut(s) 244
Kzo9I GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
LmnI GCTCC 3 cut(s) 22, 390, 985
Lsp1109I GCAGC 7 cut(s) 13, 16, 31, 82, 85, 285, 916
LweI GCATC 5 cut(s) 159, 349, 567, 709, 826
MaeI CTAG 1 cut(s) 375
MaeII ACGT 2 cut(s) 545, 700
MaeIII GTNAC 2 cut(s) 226, 1007
MalI GATC 7 cut(s) 183, 246, 405, 455, 540, 789, 1029
MboI GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
MboII GAAGA 8 cut(s) 113, 250, 482, 485, 493, 808, 811, 821
MflI RGATCY 1 cut(s) 538
MluCI AATT 3 cut(s) 137, 257, 780
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 1 cut(s) 443
MseI TTAA 1 cut(s) 288
MslI CAYNNNNRTG 1 cut(s) 498
MspA1I CMGCKG 2 cut(s) 995, 1053
MspR9I CCNGG 6 cut(s) 129, 487, 531, 856, 960, 1046
MvaI CCWGG 6 cut(s) 129, 487, 531, 856, 960, 1046
MvnI CGCG 2 cut(s) 187, 189
MwoI GCNNNNNNNGC 8 cut(s) 23, 35, 44, 50, 59, 84, 104, 156
NdeI CATATG 1 cut(s) 909
NdeII GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
NlaIII CATG 5 cut(s) 227, 237, 251, 368, 794
NlaIV GGNNCC 2 cut(s) 18, 528
NmeAIII GCCGAG 1 cut(s) 226
PagI TCATGA 1 cut(s) 790
PasI CCCWGGG 1 cut(s) 855
PceI AGGCCT 1 cut(s) 463
PcsI WCGNNNNNNNCGW 1 cut(s) 168
PfeI GAWTC 3 cut(s) 315, 734, 850
PflFI GACNNNGTC 1 cut(s) 167
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
PpuMI RGGWCCY 1 cut(s) 527
Psp1406I AACGTT 1 cut(s) 700
Psp5II RGGWCCY 1 cut(s) 527
Psp6I CCWGG 6 cut(s) 127, 485, 529, 854, 958, 1044
PspGI CCWGG 6 cut(s) 127, 485, 529, 854, 958, 1044
PspN4I GGNNCC 2 cut(s) 18, 528
PspPI GGNCC 1 cut(s) 527
PspPPI RGGWCCY 1 cut(s) 527
PstNI CAGNNNCTG 2 cut(s) 839, 1011
PsuI RGATCY 1 cut(s) 538
PsyI GACNNNGTC 1 cut(s) 167
PvuII CAGCTG 2 cut(s) 995, 1053
RsaI GTAC 2 cut(s) 506, 902
RsaNI GTAC 2 cut(s) 505, 901
RseI CAYNNNNRTG 1 cut(s) 498
SaqAI TTAA 1 cut(s) 288
Sau3AI GATC 7 cut(s) 181, 244, 403, 453, 538, 787, 1027
Sau96I GGNCC 1 cut(s) 527
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 6 cut(s) 129, 487, 531, 856, 960, 1046
SfaNI GCATC 5 cut(s) 159, 349, 567, 709, 826
SfcI CTRYAG 2 cut(s) 48, 1012
SinI GGWCC 1 cut(s) 527
SmiMI CAYNNNNRTG 1 cut(s) 498
Sse9I AATT 3 cut(s) 137, 257, 780
SseBI AGGCCT 1 cut(s) 463
SsiI CCGC 4 cut(s) 78, 87, 185, 189
SspMI CTAG 1 cut(s) 375
StuI AGGCCT 1 cut(s) 463
StyD4I CCNGG 6 cut(s) 127, 485, 529, 854, 958, 1044
StyI CCWWGG 1 cut(s) 666
TaaI ACNGT 2 cut(s) 497, 1013
TaiI ACGT 2 cut(s) 548, 703
TaqI TCGA 3 cut(s) 162, 869, 1033
TasI AATT 3 cut(s) 137, 257, 780
TatI WGTACW 1 cut(s) 900
TauI GCSGC 2 cut(s) 81, 192
TfiI GAWTC 3 cut(s) 315, 734, 850
Tru1I TTAA 1 cut(s) 288
Tru9I TTAA 1 cut(s) 288
TscAI CASTG 5 cut(s) 88, 199, 643, 712, 957
TseI GCWGC 8 cut(s) 26, 29, 44, 95, 98, 273, 929, 1050
TspDTI ATGAA 3 cut(s) 113, 483, 494
TspGWI ACGGA 1 cut(s) 167
TspRI CASTG 5 cut(s) 88, 199, 643, 712, 957
Tth111I GACNNNGTC 1 cut(s) 167
VpaK11BI GGWCC 1 cut(s) 527
XagI CCTNNNNNAGG 1 cut(s) 164
XapI RAATTY 1 cut(s) 137
XspI CTAG 1 cut(s) 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.