No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G21910 |
| fragaria_vesca | FvH4_2g30960 |
| malus_domestica | MD08G1071600.v1.1 MD15G1049600.v1.1 |
| prunus_persica | Prupe.1G403900_v2.0.a1 |
| pyrus_communis | pycom08g05950 |
| rosa_chinensis | RchiOBHm_Chr6g0311901 |
| rosa_laevigata | RLG00000010370 |
| rosa_multiflora | Rmu_sc0002888.1_g000054 |
| rosa_roxburghii | Rroxscaffold_7G00157240 |
| rosa_rugosa | Rorug06G0391300 |
| rosa_samantha | Rh6AG507600 Rh6BG518800 Rh6CG524500 Rh6DG510100 |
| rosa_wichuraiana | Rw6G044180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 19, 236 |
| AcoI | YGGCCR | 1 cut(s) | 60 |
| AcuI | CTGAAG | 1 cut(s) | 133 |
| AfaI | GTAC | 2 cut(s) | 78, 215 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 28, 29 |
| AjnI | CCWGG | 2 cut(s) | 47, 233 |
| AluBI | AGCT | 4 cut(s) | 55, 69, 153, 228 |
| AluI | AGCT | 4 cut(s) | 55, 69, 153, 228 |
| Alw21I | GWGCWC | 1 cut(s) | 90 |
| AlwI | GGATC | 2 cut(s) | 19, 236 |
| Ama87I | CYCGRG | 1 cut(s) | 223 |
| AoxI | GGCC | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 1 cut(s) | 84 |
| AvaI | CYCGRG | 1 cut(s) | 223 |
| BalI | TGGCCA | 1 cut(s) | 62 |
| Bbv12I | GWGCWC | 1 cut(s) | 90 |
| BccI | CCATC | 1 cut(s) | 22 |
| BceAI | ACGGC | 1 cut(s) | 68 |
| BciT130I | CCWGG | 2 cut(s) | 49, 235 |
| BfaI | CTAG | 2 cut(s) | 80, 128 |
| BglII | AGATCT | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 2 cut(s) | 49, 235 |
| BmeT110I | CYCGRG | 1 cut(s) | 223 |
| BmrFI | CCNGG | 2 cut(s) | 49, 235 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 28, 29 |
| Bse1I | ACTGG | 1 cut(s) | 254 |
| BseBI | CCWGG | 2 cut(s) | 49, 235 |
| BseGI | GGATG | 3 cut(s) | 14, 291, 297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 28, 29 |
| BseNI | ACTGG | 1 cut(s) | 254 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BshFI | GGCC | 1 cut(s) | 62 |
| BsiHKAI | GWGCWC | 1 cut(s) | 90 |
| BsiHKCI | CYCGRG | 1 cut(s) | 223 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 28, 29 |
| BsnI | GGCC | 1 cut(s) | 62 |
| BsoBI | CYCGRG | 1 cut(s) | 223 |
| Bsp1286I | GDGCHC | 1 cut(s) | 90 |
| Bsp1407I | TGTACA | 1 cut(s) | 213 |
| Bsp143I | GATC | 3 cut(s) | 11, 124, 241 |
| BspANI | GGCC | 1 cut(s) | 62 |
| BspPI | GGATC | 2 cut(s) | 19, 236 |
| BsrGI | TGTACA | 1 cut(s) | 213 |
| BsrI | ACTGG | 1 cut(s) | 254 |
| BssMI | GATC | 3 cut(s) | 11, 124, 241 |
| Bst2UI | CCWGG | 2 cut(s) | 49, 235 |
| Bst4CI | ACNGT | 1 cut(s) | 218 |
| Bst6I | CTCTTC | 2 cut(s) | 126, 152 |
| BstAUI | TGTACA | 1 cut(s) | 213 |
| BstF5I | GGATG | 3 cut(s) | 14, 291, 297 |
| BstKTI | GATC | 3 cut(s) | 14, 127, 244 |
| BstMBI | GATC | 3 cut(s) | 11, 124, 241 |
| BstNI | CCWGG | 2 cut(s) | 49, 235 |
| BstSCI | CCNGG | 2 cut(s) | 47, 233 |
| BstX2I | RGATCY | 1 cut(s) | 124 |
| BstYI | RGATCY | 1 cut(s) | 124 |
| BsuRI | GGCC | 1 cut(s) | 62 |
| BtsCI | GGATG | 3 cut(s) | 14, 291, 297 |
| BtsIMutI | CAGTG | 1 cut(s) | 223 |
| CsiI | ACCWGGT | 1 cut(s) | 233 |
| Csp6I | GTAC | 2 cut(s) | 77, 214 |
| CviQI | GTAC | 2 cut(s) | 77, 214 |
| DpnI | GATC | 3 cut(s) | 13, 126, 243 |
| DpnII | GATC | 3 cut(s) | 11, 124, 241 |
| EaeI | YGGCCR | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 2 cut(s) | 126, 152 |
| EarI | CTCTTC | 2 cut(s) | 126, 152 |
| Eco57I | CTGAAG | 1 cut(s) | 133 |
| Eco88I | CYCGRG | 1 cut(s) | 223 |
| EcoRII | CCWGG | 2 cut(s) | 47, 233 |
| FaiI | YATR | 5 cut(s) | 65, 158, 200, 265, 322 |
| FokI | GGATG | 2 cut(s) | 278, 284 |
| FspBI | CTAG | 2 cut(s) | 80, 128 |
| HaeIII | GGCC | 1 cut(s) | 62 |
| HindIII | AAGCTT | 2 cut(s) | 53, 67 |
| HinfI | GANTC | 1 cut(s) | 253 |
| HphI | GGTGA | 1 cut(s) | 84 |
| Hpy166II | GTNNAC | 1 cut(s) | 39 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 39 |
| HpyAV | CCTTC | 2 cut(s) | 175, 311 |
| HpyCH4III | ACNGT | 1 cut(s) | 218 |
| HpyCH4V | TGCA | 1 cut(s) | 324 |
| Kzo9I | GATC | 3 cut(s) | 11, 124, 241 |
| LpnPI | CCDG | 8 cut(s) | 31, 34, 61, 220, 235, 244, 247, 318 |
| MabI | ACCWGGT | 1 cut(s) | 233 |
| MaeI | CTAG | 2 cut(s) | 80, 128 |
| MaeIII | GTNAC | 1 cut(s) | 218 |
| MalI | GATC | 3 cut(s) | 13, 126, 243 |
| MboI | GATC | 3 cut(s) | 11, 124, 241 |
| MboII | GAAGA | 5 cut(s) | 134, 139, 143, 149, 152 |
| MflI | RGATCY | 1 cut(s) | 124 |
| MhlI | GDGCHC | 1 cut(s) | 90 |
| MlsI | TGGCCA | 1 cut(s) | 62 |
| MluNI | TGGCCA | 1 cut(s) | 62 |
| MnlI | CCTC | 5 cut(s) | 27, 112, 127, 191, 305 |
| Mox20I | TGGCCA | 1 cut(s) | 62 |
| MscI | TGGCCA | 1 cut(s) | 62 |
| Msp20I | TGGCCA | 1 cut(s) | 62 |
| MspR9I | CCNGG | 2 cut(s) | 49, 235 |
| MvaI | CCWGG | 2 cut(s) | 49, 235 |
| NdeII | GATC | 3 cut(s) | 11, 124, 241 |
| NmuCI | GTSAC | 1 cut(s) | 218 |
| PfeI | GAWTC | 1 cut(s) | 253 |
| PfoI | TCCNGGA | 1 cut(s) | 47 |
| Psp6I | CCWGG | 2 cut(s) | 47, 233 |
| PspGI | CCWGG | 2 cut(s) | 47, 233 |
| PsuI | RGATCY | 1 cut(s) | 124 |
| RsaI | GTAC | 2 cut(s) | 78, 215 |
| RsaNI | GTAC | 2 cut(s) | 77, 214 |
| Sau3AI | GATC | 3 cut(s) | 11, 124, 241 |
| ScrFI | CCNGG | 2 cut(s) | 49, 235 |
| SduI | GDGCHC | 1 cut(s) | 90 |
| SetI | ASST | 6 cut(s) | 38, 57, 71, 155, 230, 239 |
| SexAI | ACCWGGT | 1 cut(s) | 233 |
| SspMI | CTAG | 2 cut(s) | 80, 128 |
| StyD4I | CCNGG | 2 cut(s) | 47, 233 |
| TaaI | ACNGT | 1 cut(s) | 218 |
| TaqI | TCGA | 1 cut(s) | 105 |
| TatI | WGTACW | 1 cut(s) | 213 |
| TfiI | GAWTC | 1 cut(s) | 253 |
| TscAI | CASTG | 1 cut(s) | 223 |
| TseFI | GTSAC | 1 cut(s) | 218 |
| Tsp45I | GTSAC | 1 cut(s) | 218 |
| TspRI | CASTG | 1 cut(s) | 223 |
| XbaI | TCTAGA | 1 cut(s) | 127 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 25, 55 |
| XspI | CTAG | 2 cut(s) | 80, 128 |