Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016171

Physical Location & Seq

Genomic Coordinates Forward (+)

21311020 .. 21314180

Gene Structure 3161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G52520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGTGTCGTCGTCTCTGAGACTCCCTTCACTCACTTCGCTTCTATTTCCCGCCACCACTCGTTATCCAGCCACTCTCCGGCGAACCGTATGTCTACGGAACAGACCTCTTTCCGGATTCGCGACGGCGCCGAGTGGTACTGCTTCGCCGGAGACTAAGTCGTCGGAGGTTGACCGGCTTAGGTCAGACCGAGCCGTTACGCCTCGCTCACAGGACTTTAATGCTTGGTATCTTGATGTTATAGCTAGTGCTGAACTCGCGGATTATGGTCCGGTTCGTGGTACTATGGTCATTCGTCCTTATGGTTACGCGATCTGGGAAGCGATTCAGGATTATTTGAATGTGAAGTTCAAAGAGACTGGTCATAGCAACATGTACTTCCCACAGTTTATACCATACTCGTTTATTGAGAAAGAAGCTTCACACGTTGAGGGATTTAGTCCTGAACTAGCTCTTGTTACTGTTGGAGGAGGAAAAGAACTTGAGGAGAAACTTGTGGTTCGGCCTACTAGTGAAACCATAGTGAATCATATGTTTACCCAGTGGATTCACAGCTATCGTGATCTTCCTCTCATGATTAATCAGTGGGCCAATGTCACTAGATGGGAAATGCGGACGAAACCATTTATTAGGACTCTTGAATTTCTATGGCAAGAGGGTCATACTGCTCATGCCACTCCTGAGGAGGCAGAAAAGGAGGCGAAACAGATGATCGAGATCTACACCAGATTTGCTTTTGAGCAAACTGCAATTCCTGTTATTCCAGGTCGAAAATCAAAGTTAGAGACTTTTGCTGGTGCTGATATAACCTATACTATTGAGGCTATGATGGGAGATCGGAAGGCTTTGCAGGCTGGTACTAGCCACAATTTAGGCCAGAACTTTTCTCGTGCCTTTGGAACTCAGTTTGCAGATGAGAATGGAGAAAGGCAACATGTGTGGCAGACATCATGGGCAGTCAGTACACGTTTTGTTGGTGGCATTATCATGACTCACGGAGATGACACTGGTCTCATGCTTCCTCCCAAGATAGCTCCAATACAGGTAGTAATTGTACCTATTTGGAAAAAGGACACTGAGAAAACAGGAGTTCTCAGTGCTGCATCATCAGTGAAAGAAGCTCTCCAAACTGCTGGTGTTAGAGTTAAACTTGATGACACAGATCAAAGAACCCCAGGATGGAAGTTCAATTTCTGGGAAATGAAGGGAATCCCTCTAAGGATTGAAATTGGTCCACGCGATGTATCTAGTAACAGTGTCGTAGTCTCGAGGAGGGATGTACCAGGAAAGGCAGGAAAAGTTTTTGGAATATCAATGGAGCCATCAACATTAGTGGCGTATGTAAAAGAGAAGTTGGATGAGATCCAAACATCTCTTCTAGAGAAGGCGTTATCATTCAGAGACAGTAACATTGTGGATGTAAACTCATACGCTGAGCTCAAAGACGCAATTTCATCAGGGAAATGGGCAAGAGGTCCTTGGTCAGCCAGTGACGCAGATGAGCAAAGAGTAAAAGAAGAAACCGGAGCAACCATTCGTTGTTTCCCGTTTGAACAAACTCAAGGGACCAAAACATGCCTAATGACTGGAAATCCAGCAGAAGAAGTTGCAATCTTTGCCAAGTCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004827 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006433 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010109 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon ProRS-C_1 tRNA-synt_2b

Protein Analysis

543

Amino Acids

60.75

Weight (kDa)

6.55

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	160 - 329	1.7e-22	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	348 - 450	1.2e-17	Anticodon binding domain
ProRS-C_1	PF09180	477 - 543	8.5e-20	Prolyl-tRNA synthetase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52520
fragaria_vesca	FvH4_5g00340 FvH4_5g00340
prunus_persica	Prupe.5G076000_v2.0.a1
pyrus_communis	pycom04g07460
rosa_chinensis	RchiOBHm_Chr7g0202211
rosa_laevigata	RLG00000003616
rosa_multiflora	Rmu_sc0005017.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254740
rosa_rugosa	Rorug07G0069000
rosa_samantha	Rh7AG196400 Rh7BG197600 Rh7CG207500 Rh7DG203000
rosa_wichuraiana	Rw7G017190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	127
AccI	GTMKAC	1 cut(s)	94
AccII	CGCG	4 cut(s)	122, 260, 311, 1239
AccIII	TCCGGA	1 cut(s)	113
AciI	CCGC	3 cut(s)	51, 260, 613
AclWI	GGATC	1 cut(s)	1357
AcsI	RAATTY	1 cut(s)	641
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	7 cut(s)	139, 283, 377, 859, 964, 1056, 1281
AfiI	CCNNNNNNNGG	4 cut(s)	78, 113, 278, 1179
AflIII	ACRYGT	4 cut(s)	372, 424, 934, 965
AgsI	TTSAA	6 cut(s)	340, 352, 641, 1189, 1226, 1553
AhlI	ACTAGT	1 cut(s)	509
AjnI	CCWGG	3 cut(s)	763, 1174, 1282
AjuI	GAANNNNNNNTTGG	2 cut(s)	1359, 1391
AluBI	AGCT	7 cut(s)	245, 419, 452, 555, 1034, 1121, 1438
AluI	AGCT	7 cut(s)	245, 419, 452, 555, 1034, 1121, 1438
Alw21I	GWGCWC	1 cut(s)	1440
Alw26I	GTCTC	8 cut(s)	13, 18, 146, 350, 779, 1016, 1270, 1395
AlwI	GGATC	1 cut(s)	1357
Ama87I	CYCGRG	1 cut(s)	1267
Aor13HI	TCCGGA	1 cut(s)	113
AoxI	GGCC	3 cut(s)	503, 588, 874
ApeKI	GCWGC	1 cut(s)	1100
ApoI	RAATTY	1 cut(s)	641
ArsI	GACNNNNNNTTYG	2 cut(s)	76, 108
AseI	ATTAAT	1 cut(s)	579
Asp700I	GAANNNNTTC	1 cut(s)	324
AspLEI	GCGC	1 cut(s)	130
AspS9I	GGNCC	5 cut(s)	269, 588, 1232, 1475, 1566
AvaI	CYCGRG	1 cut(s)	1267
AvaII	GGWCC	4 cut(s)	269, 1232, 1475, 1566
AxyI	CCTNAGG	1 cut(s)	681
BaeI	ACNNNNGTAYC	2 cut(s)	273, 306
BanI	GGYRCC	1 cut(s)	127
BanII	GRGCYC	1 cut(s)	1440
BauI	CACGAG	1 cut(s)	888
Bbv12I	GWGCWC	1 cut(s)	1440
BbvI	GCAGC	1 cut(s)	1087
BccI	CCATC	4 cut(s)	597, 823, 1173, 1330
BceAI	ACGGC	2 cut(s)	141, 179
BciT130I	CCWGG	3 cut(s)	765, 1176, 1284
BcoDI	GTCTC	8 cut(s)	13, 18, 146, 350, 779, 1016, 1270, 1395
BcuI	ACTAGT	1 cut(s)	509
BfaI	CTAG	7 cut(s)	246, 449, 510, 600, 861, 1248, 1379
BfoI	RGCGCY	1 cut(s)	131
BglII	AGATCT	1 cut(s)	717
BisI	GCNGC	1 cut(s)	1101
BlpI	GCTNAGC	1 cut(s)	1434
BlsI	GCNGC	1 cut(s)	1102
Bme1390I	CCNGG	3 cut(s)	765, 1176, 1284
Bme18I	GGWCC	4 cut(s)	269, 1232, 1475, 1566
BmeT110I	CYCGRG	1 cut(s)	1267
BmgT120I	GGNCC	5 cut(s)	269, 588, 1232, 1475, 1566
BmiI	GGNNCC	3 cut(s)	129, 1320, 1567
BmrFI	CCNGG	3 cut(s)	765, 1176, 1284
BmrI	ACTGGG	1 cut(s)	535
BmsI	GCATC	1 cut(s)	1112
BmuI	ACTGGG	1 cut(s)	535
BoxI	GACNNNNGTC	1 cut(s)	1008
Bpu10I	CCTNAGC	1 cut(s)	179
Bpu1102I	GCTNAGC	1 cut(s)	1434
BpuEI	CTTGAG	2 cut(s)	503, 1545
BsaBI	GATNNNNATC	1 cut(s)	716
BsaHI	GRCGYC	1 cut(s)	128
BsaI	GGTCTC	1 cut(s)	1016
BsaJI	CCNNGG	2 cut(s)	1174, 1478
BsaWI	WCCGGW	3 cut(s)	113, 271, 1523
BsaXI	ACNNNNNCTCC	2 cut(s)	143, 173
Bsc4I	CCNNNNNNNGG	4 cut(s)	78, 113, 278, 1179
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	5 cut(s)	364, 541, 1012, 1488, 1591
Bse21I	CCTNAGG	1 cut(s)	681
Bse8I	GATNNNNATC	1 cut(s)	716
BseAI	TCCGGA	1 cut(s)	113
BseBI	CCWGG	3 cut(s)	765, 1176, 1284
BseDI	CCNNGG	2 cut(s)	1174, 1478
BseGI	GGATG	4 cut(s)	1184, 1282, 1363, 1423
BseJI	GATNNNNATC	1 cut(s)	716
BseLI	CCNNNNNNNGG	4 cut(s)	78, 113, 278, 1179
BseMII	CTCAG	6 cut(s)	8, 672, 917, 1068, 1108, 1425
BseNI	ACTGG	5 cut(s)	364, 541, 1012, 1488, 1591
BseRI	GAGGAG	4 cut(s)	483, 500, 698, 1285
BseXI	GCAGC	1 cut(s)	1087
Bsh1236I	CGCG	4 cut(s)	122, 260, 311, 1239
BshFI	GGCC	3 cut(s)	505, 590, 876
BshNI	GGYRCC	1 cut(s)	127
BsiHKAI	GWGCWC	1 cut(s)	1440
BsiHKCI	CYCGRG	1 cut(s)	1267
BsiSI	CCGG	6 cut(s)	79, 114, 149, 175, 272, 1524
BslFI	GGGAC	1 cut(s)	1579
BslI	CCNNNNNNNGG	4 cut(s)	78, 113, 278, 1179
BsmAI	GTCTC	8 cut(s)	13, 18, 146, 350, 779, 1016, 1270, 1395
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	1 cut(s)	1579
BsnI	GGCC	3 cut(s)	505, 590, 876
Bso31I	GGTCTC	1 cut(s)	1016
BsoBI	CYCGRG	1 cut(s)	1267
Bsp1286I	GDGCHC	1 cut(s)	1440
Bsp13I	TCCGGA	1 cut(s)	113
Bsp143I	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
Bsp1720I	GCTNAGC	1 cut(s)	1434
Bsp68I	TCGCGA	1 cut(s)	122
BspACI	CCGC	3 cut(s)	51, 260, 613
BspANI	GGCC	3 cut(s)	505, 590, 876
BspCNI	CTCAG	6 cut(s)	9, 673, 916, 1069, 1107, 1426
BspEI	TCCGGA	1 cut(s)	113
BspFNI	CGCG	4 cut(s)	122, 260, 311, 1239
BspHI	TCATGA	2 cut(s)	573, 987
BspLI	GGNNCC	3 cut(s)	129, 1320, 1567
BspPI	GGATC	1 cut(s)	1357
BspT107I	GGYRCC	1 cut(s)	127
BspTNI	GGTCTC	1 cut(s)	1016
BsrFI	RCCGGY	1 cut(s)	174
BsrI	ACTGG	5 cut(s)	364, 541, 1012, 1488, 1591
BssAI	RCCGGY	1 cut(s)	174
BssECI	CCNNGG	2 cut(s)	1174, 1478
BssMI	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
BssNI	GRCGYC	1 cut(s)	128
BssSI	CACGAG	1 cut(s)	888
BssT1I	CCWWGG	1 cut(s)	1478
Bst2BI	CACGAG	1 cut(s)	888
Bst2UI	CCWGG	3 cut(s)	765, 1176, 1284
Bst4CI	ACNGT	5 cut(s)	88, 387, 463, 1256, 1406
Bst6I	CTCTTC	1 cut(s)	1380
BstACI	GRCGYC	1 cut(s)	128
BstAPI	GCANNNNNTGC	1 cut(s)	1616
BstC8I	GCNNGC	1 cut(s)	852
BstDEI	CTNAG	9 cut(s)	17, 156, 179, 681, 903, 1077, 1094, 1217, 1434
BstF5I	GGATG	4 cut(s)	1184, 1282, 1363, 1423
BstFNI	CGCG	4 cut(s)	122, 260, 311, 1239
BstH2I	RGCGCY	1 cut(s)	131
BstHHI	GCGC	1 cut(s)	130
BstKTI	GATC	7 cut(s)	315, 565, 714, 720, 838, 1165, 1365
BstMAI	GTCTC	8 cut(s)	13, 18, 146, 350, 779, 1016, 1270, 1395
BstMBI	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
BstMWI	GCNNNNNNNGC	4 cut(s)	257, 851, 1493, 1616
BstNI	CCWGG	3 cut(s)	765, 1176, 1284
BstNSI	RCATGY	3 cut(s)	376, 938, 1578
BstPAI	GACNNNNGTC	1 cut(s)	1008
BstSCI	CCNGG	3 cut(s)	763, 1174, 1282
BstUI	CGCG	4 cut(s)	122, 260, 311, 1239
BstV1I	GCAGC	1 cut(s)	1087
BstX2I	RGATCY	2 cut(s)	717, 1362
BstXI	CCANNNNNNTGG	1 cut(s)	1133
BstYI	RGATCY	2 cut(s)	717, 1362
Bsu36I	CCTNAGG	1 cut(s)	681
BsuRI	GGCC	3 cut(s)	505, 590, 876
BtgZI	GCGATG	1 cut(s)	1254
BtsCI	GGATG	4 cut(s)	1184, 1282, 1363, 1423
BtsIMutI	CAGTG	8 cut(s)	548, 590, 1005, 1074, 1102, 1116, 1261, 1495
BtuMI	TCGCGA	1 cut(s)	122
Cac8I	GCNNGC	1 cut(s)	852
CciI	TCATGA	2 cut(s)	573, 987
CfoI	GCGC	1 cut(s)	130
Cfr10I	RCCGGY	1 cut(s)	174
Cfr13I	GGNCC	5 cut(s)	269, 588, 1232, 1475, 1566
CseI	GACGC	2 cut(s)	1454, 1502
Csp6I	GTAC	7 cut(s)	138, 282, 376, 858, 963, 1055, 1280
CspCI	CAANNNNNGTGG	4 cut(s)	920, 955, 1314, 1349
CviAII	CATG	8 cut(s)	373, 574, 671, 935, 951, 988, 1015, 1575
CviQI	GTAC	7 cut(s)	138, 282, 376, 858, 963, 1055, 1280
DdeI	CTNAG	9 cut(s)	17, 156, 179, 681, 903, 1077, 1094, 1217, 1434
DinI	GGCGCC	1 cut(s)	129
DpnI	GATC	7 cut(s)	314, 564, 713, 719, 837, 1164, 1364
DpnII	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
DrdI	GACNNNNNNGTC	1 cut(s)	160
DseDI	GACNNNNNNGTC	1 cut(s)	160
Eam1104I	CTCTTC	1 cut(s)	1380
EarI	CTCTTC	1 cut(s)	1380
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	1 cut(s)	1478
Eco24I	GRGCYC	1 cut(s)	1440
Eco31I	GGTCTC	1 cut(s)	1016
Eco47I	GGWCC	4 cut(s)	269, 1232, 1475, 1566
Eco53kI	GAGCTC	1 cut(s)	1438
Eco81I	CCTNAGG	1 cut(s)	681
Eco88I	CYCGRG	1 cut(s)	1267
EcoICRI	GAGCTC	1 cut(s)	1438
EcoO109I	RGGNCCY	1 cut(s)	1475
EcoRII	CCWGG	3 cut(s)	763, 1174, 1282
EcoT14I	CCWWGG	1 cut(s)	1478
EcoT38I	GRGCYC	1 cut(s)	1440
EgeI	GGCGCC	1 cut(s)	129
EheI	GGCGCC	1 cut(s)	129
ErhI	CCWWGG	1 cut(s)	1478
Esp3I	CGTCTC	1 cut(s)	18
FaeI	CATG	8 cut(s)	376, 577, 674, 938, 954, 991, 1018, 1578
FalI	AAGNNNNNCTT	2 cut(s)	1462, 1494
FaqI	GGGAC	1 cut(s)	1579
FatI	CATG	8 cut(s)	372, 573, 670, 934, 950, 987, 1014, 1574
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	531
FblI	GTMKAC	1 cut(s)	94
Fnu4HI	GCNGC	1 cut(s)	1101
FokI	GGATG	4 cut(s)	1191, 1289, 1370, 1430
FriOI	GRGCYC	1 cut(s)	1440
Fsp4HI	GCNGC	1 cut(s)	1101
FspBI	CTAG	7 cut(s)	246, 449, 510, 600, 861, 1248, 1379
GlaI	GCGC	1 cut(s)	129
GluI	GCNGC	1 cut(s)	1101
HaeII	RGCGCY	1 cut(s)	131
HaeIII	GGCC	3 cut(s)	505, 590, 876
HapII	CCGG	6 cut(s)	79, 114, 149, 175, 272, 1524
HgaI	GACGC	2 cut(s)	1454, 1502
HhaI	GCGC	1 cut(s)	130
Hin1I	GRCGYC	1 cut(s)	128
Hin1II	CATG	8 cut(s)	376, 577, 674, 938, 954, 991, 1018, 1578
Hin6I	GCGC	1 cut(s)	128
HinP1I	GCGC	1 cut(s)	128
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HindIII	AAGCTT	1 cut(s)	417
HinfI	GANTC	8 cut(s)	21, 117, 325, 526, 547, 634, 991, 1209
HpaII	CCGG	6 cut(s)	79, 114, 149, 175, 272, 1524
Hpy166II	GTNNAC	6 cut(s)	95, 172, 537, 965, 1235, 1423
Hpy188I	TCNGA	5 cut(s)	18, 166, 187, 840, 1400
Hpy8I	GTNNAC	6 cut(s)	95, 172, 537, 965, 1235, 1423
Hpy99I	CGWCG	3 cut(s)	13, 127, 166
HpyAV	CCTTC	4 cut(s)	36, 835, 1198, 1378
HpyCH4III	ACNGT	5 cut(s)	88, 387, 463, 1256, 1406
HpyCH4IV	ACGT	2 cut(s)	426, 967
HpyCH4V	TGCA	5 cut(s)	749, 850, 911, 1103, 1610
HpyF10VI	GCNNNNNNNGC	4 cut(s)	257, 851, 1493, 1616
HpyF3I	CTNAG	9 cut(s)	17, 156, 179, 681, 903, 1077, 1094, 1217, 1434
HpySE526I	ACGT	2 cut(s)	426, 967
Hsp92I	GRCGYC	1 cut(s)	128
Hsp92II	CATG	8 cut(s)	376, 577, 674, 938, 954, 991, 1018, 1578
HspAI	GCGC	1 cut(s)	128
KasI	GGCGCC	1 cut(s)	127
Kpn2I	TCCGGA	1 cut(s)	113
Kzo9I	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
LmnI	GCTCC	3 cut(s)	1039, 1318, 1526
Lsp1109I	GCAGC	1 cut(s)	1087
LweI	GCATC	1 cut(s)	1112
MaeI	CTAG	7 cut(s)	246, 449, 510, 600, 861, 1248, 1379
MaeII	ACGT	2 cut(s)	426, 967
MaeIII	GTNAC	7 cut(s)	196, 305, 457, 595, 1250, 1406, 1490
MalI	GATC	7 cut(s)	314, 564, 713, 719, 837, 1164, 1364
MboI	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
MboII	GAAGA	4 cut(s)	557, 1367, 1529, 1613
MflI	RGATCY	2 cut(s)	717, 1362
MhlI	GDGCHC	1 cut(s)	1440
MluCI	AATT	7 cut(s)	641, 750, 868, 1050, 1189, 1227, 1449
Mly113I	GGCGCC	1 cut(s)	128
MlyI	GAGTC	3 cut(s)	15, 628, 985
MmeI	TCCRAC	3 cut(s)	144, 445, 1335
MroI	TCCGGA	1 cut(s)	113
MroXI	GAANNNNTTC	1 cut(s)	324
MseI	TTAA	4 cut(s)	219, 579, 1146, 1630
MslI	CAYNNNNRTG	2 cut(s)	986, 999
MspI	CCGG	6 cut(s)	79, 114, 149, 175, 272, 1524
MspR9I	CCNGG	3 cut(s)	765, 1176, 1284
MvaI	CCWGG	3 cut(s)	765, 1176, 1284
MvnI	CGCG	4 cut(s)	122, 260, 311, 1239
MwoI	GCNNNNNNNGC	4 cut(s)	257, 851, 1493, 1616
NarI	GGCGCC	1 cut(s)	128
NdeI	CATATG	1 cut(s)	531
NdeII	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
NlaIII	CATG	8 cut(s)	376, 577, 674, 938, 954, 991, 1018, 1578
NlaIV	GGNNCC	3 cut(s)	129, 1320, 1567
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	2 cut(s)	595, 1490
NruI	TCGCGA	1 cut(s)	122
NspI	RCATGY	3 cut(s)	376, 938, 1578
PaeR7I	CTCGAG	1 cut(s)	1267
PagI	TCATGA	2 cut(s)	573, 987
PciI	ACATGT	2 cut(s)	372, 934
PdmI	GAANNNNTTC	1 cut(s)	324
PfeI	GAWTC	5 cut(s)	117, 325, 526, 547, 1209
PflFI	GACNNNGTC	1 cut(s)	157
PkrI	GCNGC	1 cut(s)	1102
PleI	GAGTC	3 cut(s)	15, 628, 985
PluTI	GGCGCC	1 cut(s)	131
PpsI	GAGTC	3 cut(s)	15, 628, 985
PpuMI	RGGWCCY	1 cut(s)	1475
PscI	ACATGT	2 cut(s)	372, 934
PshAI	GACNNNNGTC	1 cut(s)	1008
PshBI	ATTAAT	1 cut(s)	579
Psp124BI	GAGCTC	1 cut(s)	1440
Psp5II	RGGWCCY	1 cut(s)	1475
Psp6I	CCWGG	3 cut(s)	763, 1174, 1282
PspGI	CCWGG	3 cut(s)	763, 1174, 1282
PspN4I	GGNNCC	3 cut(s)	129, 1320, 1567
PspPI	GGNCC	5 cut(s)	269, 588, 1232, 1475, 1566
PspPPI	RGGWCCY	1 cut(s)	1475
PsuI	RGATCY	2 cut(s)	717, 1362
PsyI	GACNNNGTC	1 cut(s)	157
RruI	TCGCGA	1 cut(s)	122
RsaI	GTAC	7 cut(s)	139, 283, 377, 859, 964, 1056, 1281
RsaNI	GTAC	7 cut(s)	138, 282, 376, 858, 963, 1055, 1280
RseI	CAYNNNNRTG	2 cut(s)	986, 999
SacI	GAGCTC	1 cut(s)	1440
SaqAI	TTAA	4 cut(s)	219, 579, 1146, 1630
SatI	GCNGC	1 cut(s)	1101
Sau3AI	GATC	7 cut(s)	312, 562, 711, 717, 835, 1162, 1362
Sau96I	GGNCC	5 cut(s)	269, 588, 1232, 1475, 1566
SchI	GAGTC	3 cut(s)	15, 628, 985
ScrFI	CCNGG	3 cut(s)	765, 1176, 1284
SduI	GDGCHC	1 cut(s)	1440
SfaNI	GCATC	1 cut(s)	1112
SfoI	GGCGCC	1 cut(s)	129
Sfr274I	CTCGAG	1 cut(s)	1267
SinI	GGWCC	4 cut(s)	269, 1232, 1475, 1566
SlaI	CTCGAG	1 cut(s)	1267
SmiMI	CAYNNNNRTG	2 cut(s)	986, 999
SmlI	CTYRAG	3 cut(s)	482, 1267, 1560
SmoI	CTYRAG	3 cut(s)	482, 1267, 1560
SpeI	ACTAGT	1 cut(s)	509
Sse9I	AATT	7 cut(s)	641, 750, 868, 1050, 1189, 1227, 1449
SsiI	CCGC	3 cut(s)	51, 260, 613
SspDI	GGCGCC	1 cut(s)	127
SspMI	CTAG	7 cut(s)	246, 449, 510, 600, 861, 1248, 1379
SstI	GAGCTC	1 cut(s)	1440
StyD4I	CCNGG	3 cut(s)	763, 1174, 1282
StyI	CCWWGG	1 cut(s)	1478
TaaI	ACNGT	5 cut(s)	88, 387, 463, 1256, 1406
TaiI	ACGT	2 cut(s)	429, 970
TaqI	TCGA	3 cut(s)	714, 769, 1268
TaqII	GACCGA	1 cut(s)	204
TasI	AATT	7 cut(s)	641, 750, 868, 1050, 1189, 1227, 1449
TatI	WGTACW	2 cut(s)	375, 962
TfiI	GAWTC	5 cut(s)	117, 325, 526, 547, 1209
Tru1I	TTAA	4 cut(s)	219, 579, 1146, 1630
Tru9I	TTAA	4 cut(s)	219, 579, 1146, 1630
TscAI	CASTG	8 cut(s)	548, 590, 1012, 1081, 1102, 1116, 1261, 1495
TseFI	GTSAC	2 cut(s)	595, 1490
TseI	GCWGC	1 cut(s)	1100
Tsp45I	GTSAC	2 cut(s)	595, 1490
TspDTI	ATGAA	2 cut(s)	1217, 1443
TspGWI	ACGGA	2 cut(s)	112, 1011
TspRI	CASTG	8 cut(s)	548, 590, 1012, 1081, 1102, 1116, 1261, 1495
Tth111I	GACNNNGTC	1 cut(s)	157
VpaK11BI	GGWCC	4 cut(s)	269, 1232, 1475, 1566
VspI	ATTAAT	1 cut(s)	579
XapI	RAATTY	1 cut(s)	641
XbaI	TCTAGA	1 cut(s)	1378
XceI	RCATGY	3 cut(s)	376, 938, 1578
XhoI	CTCGAG	1 cut(s)	1267
XmiI	GTMKAC	1 cut(s)	94
XmnI	GAANNNNTTC	1 cut(s)	324
XspI	CTAG	7 cut(s)	246, 449, 510, 600, 861, 1248, 1379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.