Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0016171

Physical Location & Seq

Genomic Coordinates Reverse (-)

235729 .. 239624

Gene Structure 3896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g00340.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGCCGTCTCTCTGAGACTCCCATCTCTGAGCTCGCTCTTCTCCCCCTCCATCTCCCGCCGTTACCCCTCGGTTCTCCGCCGTCGTCACCACCTCCGAACTCCTTCTTTCACCGCCAGATTCTCAGCTCAGAGCACGGTGCCGGCGACTGAAAAAGTCCAGGAAGGCGGCGTCACTCCTCGCTCACAGGACTTCAACGCTTGGTACCTCGACGTCATTGCGAATGCGGAGCTTGCAGATTACGGTCCCGTTCGCGGAACCATGGTGATTCGTCCCTACGGCTATGCTATCTGGGAAGCCATTCAGGATTATCTGAATGTCAAGTTCAAAGAGACCGGTCACAGTAACATGTATTTCCCACAGCTTATACCCTACTCGTTTATAGAGAAAGAGGCTAGTCACGTTGAAGGTTTTAGTCCTGAATTAGCTCTTGTGACTATTGGAGGAGGGAAGGAGCTTGAAGAAAAGCTTGTGGTTCGACCCACAAGTGAAACCATAGTGAATCACATGTTCACTCAGTGGATTCATAGTTACCGTGATCTTCCGCTTATGGTGAACCAGTGGGCAAATGTCACAAGATGGGAGATGCGGACGAAACCTTTTGTGAGGACGCTTGAGTTTCTCTGGCAGGAAGGCCATACTGCTCACGCCACTCCAGAGGAGGCAGAGAAAGAGGCTATACAGATGATTGACGTATATACAAAATTTGCTTATGAGGAAGCTGCAATACCTGTCATTGCAGGTCGAAAATCAAAAGTGGAAACATTTGCTGGTGCTGTTAGGACCTACACAATAGAGGCTATGATGGGTGATCGGAAGGCACTGCAGGCTGGAACCAGCCACAATCTTGGGCAGAACTTCTCTCGTGCCTTTGGAACACTGTTTACTGATGAAAGTGGACAGAGGCAACATGTATGGCAGACTTCCTGGGCTGTGAGTACCCGTTTTGTTGGTGGCATTATAATGACCCATGGAGACGACACTGGTTTAATGCTTCCCCCAAAGATTGCTCCAATACAGGTGGTGATCGTTCCCATTTGGAAGAAGGAAGATGATAAAGCAGCAGTTCTCAATGCTGCATCATCTGTAAAGGATGCACTGCACACTGCGGGGATTAAAGTTAAACTTGATGACACTGATCAAAGAACACCAGGATGGAAATTCAATTTCTGGGAGATGAAGGGAGTCCCTTTAAGGATTGAAATCGGTCCTCGTGACGTATCAAGCCAGAGTGTGGTTGTATGTAGAAGAGATGTTCCTGGAAAGCAAGGGAAGGTTTTTGGAATATCCATGGAGCCTTTGATTTTGGAGGCTTATATCAAGGACAAGTTGGATGAGATCCAGTCATCTCTTTTGGGACAAGCAAAATCATTTCGTGATAGCAATATTGTGGATGTGAGCTCATATGATGAACTCAAAGTTGCGATCTCCCAGGGAAAATGGGCAAGAGGTCCTTGGTCAGCTAGTGACAAAGATGAGTTGAAGGTGAAAGAAGAAACAGGGGCAACCATAAGGTGTTTTCCTTTTGACCAGCCGCATGGGATTAAAACATGTTTGATGACTGGCAATCCTGCTGAGGAAGTTGCCATTTTCGCGAAGTCATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004827 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006433 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010109 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon ProRS-C_1 tRNA-synt_2b

Protein Analysis

536

Amino Acids

60.05

Weight (kDa)

7.23

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	152 - 321	2.1e-20	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	340 - 420	1.5e-16	Anticodon binding domain
ProRS-C_1	PF09180	469 - 535	2.6e-19	Prolyl-tRNA synthetase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52520
fragaria_vesca	FvH4_5g00340 FvH4_5g00340
prunus_persica	Prupe.5G076000_v2.0.a1
pyrus_communis	pycom04g07460
rosa_chinensis	RchiOBHm_Chr7g0202211
rosa_laevigata	RLG00000003616
rosa_multiflora	Rmu_sc0005017.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254740
rosa_rugosa	Rorug07G0069000
rosa_samantha	Rh7AG196400 Rh7BG197600 Rh7CG207500 Rh7DG203000
rosa_wichuraiana	Rw7G017190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	962
AatII	GACGTC	1 cut(s)	216
Acc36I	ACCTGC	1 cut(s)	731
Acc65I	GGTACC	1 cut(s)	204
AccB1I	GGYRCC	2 cut(s)	139, 204
AccB7I	CCANNNNNTGG	1 cut(s)	1234
AccII	CGCG	2 cut(s)	255, 1595
AclWI	GGATC	1 cut(s)	1333
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	704, 1160
AcyI	GRCGYC	2 cut(s)	171, 213
AdeI	CACNNNGTG	1 cut(s)	519
AfaI	GTAC	2 cut(s)	206, 940
AfiI	CCNNNNNNNGG	2 cut(s)	254, 1234
AflIII	ACRYGT	4 cut(s)	348, 507, 910, 1550
AgeI	ACCGGT	1 cut(s)	335
AgsI	TTSAA	7 cut(s)	196, 328, 407, 461, 1165, 1202, 1483
AjnI	CCWGG	5 cut(s)	159, 926, 1150, 1258, 1431
Alw21I	GWGCWC	3 cut(s)	35, 137, 1403
Alw26I	GTCTC	4 cut(s)	10, 13, 326, 969
AlwI	GGATC	1 cut(s)	1333
AoxI	GGCC	2 cut(s)	3, 634
ApeKI	GCWGC	3 cut(s)	722, 1061, 1076
ApoI	RAATTY	2 cut(s)	704, 1160
AsiGI	ACCGGT	1 cut(s)	335
Asp700I	GAANNNNTTC	2 cut(s)	103, 300
Asp718I	GGTACC	1 cut(s)	204
AspS9I	GGNCC	4 cut(s)	245, 783, 1208, 1451
AsuHPI	GGTGA	7 cut(s)	80, 103, 277, 565, 821, 1036, 1498
AvaII	GGWCC	4 cut(s)	245, 783, 1208, 1451
BanI	GGYRCC	2 cut(s)	139, 204
BanII	GRGCYC	2 cut(s)	35, 1403
BarI	GAAGNNNNNNTAC	2 cut(s)	711, 743
BauI	CACGAG	2 cut(s)	864, 1212
Bbv12I	GWGCWC	3 cut(s)	35, 137, 1403
BbvCI	CCTCAGC	1 cut(s)	1575
BbvI	GCAGC	3 cut(s)	709, 1063, 1073
BccI	CCATC	5 cut(s)	31, 59, 573, 799, 1149
BceAI	ACGGC	3 cut(s)	45, 66, 295
BcgI	CGANNNNNNTGC	2 cut(s)	200, 234
BciT130I	CCWGG	5 cut(s)	161, 928, 1152, 1260, 1433
BclI	TGATCA	1 cut(s)	1138
BcoDI	GTCTC	4 cut(s)	10, 13, 326, 969
BfaI	CTAG	2 cut(s)	396, 1464
BfmI	CTRYAG	1 cut(s)	824
BfuAI	ACCTGC	1 cut(s)	731
BisI	GCNGC	5 cut(s)	169, 723, 1062, 1077, 1535
BlsI	GCNGC	5 cut(s)	170, 724, 1063, 1078, 1536
Bme1390I	CCNGG	5 cut(s)	161, 928, 1152, 1260, 1433
Bme18I	GGWCC	4 cut(s)	245, 783, 1208, 1451
BmgT120I	GGNCC	4 cut(s)	245, 783, 1208, 1451
BmiI	GGNNCC	6 cut(s)	141, 206, 247, 259, 835, 1296
BmrFI	CCNGG	5 cut(s)	161, 928, 1152, 1260, 1433
BmsI	GCATC	3 cut(s)	576, 1084, 1088
BpmI	CTGGAG	1 cut(s)	639
Bpu10I	CCTNAGC	1 cut(s)	1575
BpuEI	CTTGAG	1 cut(s)	635
BsaBI	GATNNNNATC	1 cut(s)	1202
BsaHI	GRCGYC	2 cut(s)	171, 213
BsaI	GGTCTC	1 cut(s)	326
BsaJI	CCNNGG	8 cut(s)	69, 261, 927, 970, 1290, 1431, 1432, 1454
BsaWI	WCCGGW	1 cut(s)	335
Bsc4I	CCNNNNNNNGG	2 cut(s)	254, 1234
Bse118I	RCCGGY	2 cut(s)	142, 335
Bse1I	ACTGG	4 cut(s)	559, 988, 1342, 1567
Bse3DI	GCAATG	2 cut(s)	216, 735
Bse8I	GATNNNNATC	1 cut(s)	1202
BseBI	CCWGG	5 cut(s)	161, 928, 1152, 1260, 1433
BseDI	CCNNGG	8 cut(s)	69, 261, 927, 970, 1290, 1431, 1432, 1454
BseGI	GGATG	4 cut(s)	1099, 1160, 1339, 1399
BseJI	GATNNNNATC	1 cut(s)	1202
BseLI	CCNNNNNNNGG	2 cut(s)	254, 1234
BseMI	GCAATG	2 cut(s)	216, 735
BseMII	CTCAG	6 cut(s)	5, 20, 138, 143, 530, 1566
BseNI	ACTGG	4 cut(s)	559, 988, 1342, 1567
BseRI	GAGGAG	3 cut(s)	168, 459, 674
BseXI	GCAGC	3 cut(s)	709, 1063, 1073
BsgI	GTGCAG	1 cut(s)	1085
Bsh1236I	CGCG	2 cut(s)	255, 1595
BshFI	GGCC	2 cut(s)	5, 636
BshNI	GGYRCC	2 cut(s)	139, 204
BshTI	ACCGGT	1 cut(s)	335
BsiHKAI	GWGCWC	3 cut(s)	35, 137, 1403
BsiSI	CCGG	2 cut(s)	143, 336
BslFI	GGGAC	4 cut(s)	231, 258, 1172, 1371
BslI	CCNNNNNNNGG	2 cut(s)	254, 1234
BsmAI	GTCTC	4 cut(s)	10, 13, 326, 969
BsmBI	CGTCTC	2 cut(s)	13, 969
BsmFI	GGGAC	4 cut(s)	231, 258, 1172, 1371
BsmI	GAATGC	1 cut(s)	229
BsnI	GGCC	2 cut(s)	5, 636
Bso31I	GGTCTC	1 cut(s)	326
Bsp1286I	GDGCHC	3 cut(s)	35, 137, 1403
Bsp143I	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
Bsp19I	CCATGG	3 cut(s)	261, 970, 1290
Bsp68I	TCGCGA	1 cut(s)	1595
BspANI	GGCC	2 cut(s)	5, 636
BspCNI	CTCAG	6 cut(s)	6, 21, 137, 142, 529, 1567
BspFNI	CGCG	2 cut(s)	255, 1595
BspLI	GGNNCC	6 cut(s)	141, 206, 247, 259, 835, 1296
BspMAI	CTGCAG	1 cut(s)	828
BspMI	ACCTGC	1 cut(s)	731
BspPI	GGATC	1 cut(s)	1333
BspQI	GCTCTTC	1 cut(s)	44
BspT107I	GGYRCC	2 cut(s)	139, 204
BspTNI	GGTCTC	1 cut(s)	326
BsrDI	GCAATG	2 cut(s)	216, 735
BsrFI	RCCGGY	2 cut(s)	142, 335
BsrI	ACTGG	4 cut(s)	559, 988, 1342, 1567
BssAI	RCCGGY	2 cut(s)	142, 335
BssECI	CCNNGG	8 cut(s)	69, 261, 927, 970, 1290, 1431, 1432, 1454
BssMI	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
BssNI	GRCGYC	2 cut(s)	171, 213
BssSI	CACGAG	2 cut(s)	864, 1212
BssT1I	CCWWGG	4 cut(s)	261, 970, 1290, 1454
Bst2BI	CACGAG	2 cut(s)	864, 1212
Bst2UI	CCWGG	5 cut(s)	161, 928, 1152, 1260, 1433
Bst4CI	ACNGT	5 cut(s)	139, 245, 344, 536, 882
Bst6I	CTCTTC	2 cut(s)	44, 1243
BstACI	GRCGYC	2 cut(s)	171, 213
BstC8I	GCNNGC	4 cut(s)	35, 144, 234, 828
BstDEI	CTNAG	6 cut(s)	14, 29, 124, 129, 516, 1575
BstDSI	CCRYGG	3 cut(s)	261, 970, 1290
BstF5I	GGATG	4 cut(s)	1099, 1160, 1339, 1399
BstFNI	CGCG	2 cut(s)	255, 1595
BstKTI	GATC	6 cut(s)	541, 814, 1029, 1141, 1341, 1428
BstMAI	GTCTC	4 cut(s)	10, 13, 326, 969
BstMBI	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
BstMWI	GCNNNNNNNGC	3 cut(s)	233, 827, 1592
BstNI	CCWGG	5 cut(s)	161, 928, 1152, 1260, 1433
BstNSI	RCATGY	4 cut(s)	352, 511, 914, 1554
BstSCI	CCNGG	5 cut(s)	159, 926, 1150, 1258, 1431
BstSFI	CTRYAG	1 cut(s)	824
BstUI	CGCG	2 cut(s)	255, 1595
BstV1I	GCAGC	3 cut(s)	709, 1063, 1073
BstX2I	RGATCY	1 cut(s)	1338
BstXI	CCANNNNNNTGG	2 cut(s)	848, 1538
BstYI	RGATCY	1 cut(s)	1338
BsuRI	GGCC	2 cut(s)	5, 636
BtgI	CCRYGG	3 cut(s)	261, 970, 1290
BtsCI	GGATG	4 cut(s)	1099, 1160, 1339, 1399
BtsI	GCAGTG	3 cut(s)	821, 1097, 1104
BtsIMutI	CAGTG	8 cut(s)	524, 566, 821, 878, 981, 1097, 1104, 1134
BtuMI	TCGCGA	1 cut(s)	1595
BveI	ACCTGC	1 cut(s)	731
Cac8I	GCNNGC	4 cut(s)	35, 144, 234, 828
Cfr10I	RCCGGY	2 cut(s)	142, 335
Cfr13I	GGNCC	4 cut(s)	245, 783, 1208, 1451
CseI	GACGC	2 cut(s)	160, 619
Csp6I	GTAC	2 cut(s)	205, 939
CspAI	ACCGGT	1 cut(s)	335
CspCI	CAANNNNNGTGG	2 cut(s)	1002, 1037
CviAII	CATG	8 cut(s)	262, 349, 508, 911, 971, 1291, 1538, 1551
CviQI	GTAC	2 cut(s)	205, 939
DdeI	CTNAG	6 cut(s)	14, 29, 124, 129, 516, 1575
DpnI	GATC	6 cut(s)	540, 813, 1028, 1140, 1340, 1427
DpnII	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
DraIII	CACNNNGTG	1 cut(s)	519
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	44, 1243
EarI	CTCTTC	2 cut(s)	44, 1243
EciI	GGCGGA	1 cut(s)	68
Ecl136II	GAGCTC	2 cut(s)	33, 1401
Eco130I	CCWWGG	4 cut(s)	261, 970, 1290, 1454
Eco24I	GRGCYC	2 cut(s)	35, 1403
Eco31I	GGTCTC	1 cut(s)	326
Eco47I	GGWCC	4 cut(s)	245, 783, 1208, 1451
Eco53kI	GAGCTC	2 cut(s)	33, 1401
EcoICRI	GAGCTC	2 cut(s)	33, 1401
EcoO109I	RGGNCCY	2 cut(s)	783, 1451
EcoRII	CCWGG	5 cut(s)	159, 926, 1150, 1258, 1431
EcoT14I	CCWWGG	4 cut(s)	261, 970, 1290, 1454
EcoT38I	GRGCYC	2 cut(s)	35, 1403
ErhI	CCWWGG	4 cut(s)	261, 970, 1290, 1454
Esp3I	CGTCTC	2 cut(s)	13, 969
FaeI	CATG	8 cut(s)	265, 352, 511, 914, 974, 1294, 1541, 1554
FalI	AAGNNNNNCTT	6 cut(s)	453, 485, 1110, 1142, 1438, 1470
FaqI	GGGAC	4 cut(s)	231, 258, 1172, 1371
FatI	CATG	8 cut(s)	261, 348, 507, 910, 970, 1290, 1537, 1550
FauI	CCCGC	2 cut(s)	65, 1102
FauNDI	CATATG	1 cut(s)	1405
FbaI	TGATCA	1 cut(s)	1138
Fnu4HI	GCNGC	5 cut(s)	169, 723, 1062, 1077, 1535
FokI	GGATG	4 cut(s)	1106, 1167, 1346, 1406
FriOI	GRGCYC	2 cut(s)	35, 1403
Fsp4HI	GCNGC	5 cut(s)	169, 723, 1062, 1077, 1535
FspBI	CTAG	2 cut(s)	396, 1464
GluI	GCNGC	5 cut(s)	169, 723, 1062, 1077, 1535
GsuI	CTGGAG	1 cut(s)	639
HaeIII	GGCC	2 cut(s)	5, 636
HapII	CCGG	2 cut(s)	143, 336
HgaI	GACGC	2 cut(s)	160, 619
Hin1I	GRCGYC	2 cut(s)	171, 213
Hin1II	CATG	8 cut(s)	265, 352, 511, 914, 974, 1294, 1541, 1554
HindIII	AAGCTT	1 cut(s)	467
HinfI	GANTC	6 cut(s)	18, 120, 268, 502, 523, 1185
HpaII	CCGG	2 cut(s)	143, 336
HphI	GGTGA	7 cut(s)	80, 103, 277, 565, 821, 1036, 1498
Hpy166II	GTNNAC	4 cut(s)	513, 556, 885, 899
Hpy188I	TCNGA	6 cut(s)	15, 30, 98, 132, 315, 816
Hpy188III	TCNNGA	6 cut(s)	305, 419, 656, 1214, 1376, 1594
Hpy8I	GTNNAC	4 cut(s)	513, 556, 885, 899
Hpy99I	CGWCG	2 cut(s)	87, 215
HpyCH4III	ACNGT	5 cut(s)	139, 245, 344, 536, 882
HpyCH4IV	ACGT	4 cut(s)	213, 402, 693, 1218
HpyCH4V	TGCA	7 cut(s)	236, 725, 740, 826, 1079, 1097, 1102
HpyF10VI	GCNNNNNNNGC	3 cut(s)	233, 827, 1592
HpyF3I	CTNAG	6 cut(s)	14, 29, 124, 129, 516, 1575
HpySE526I	ACGT	4 cut(s)	213, 402, 693, 1218
Hsp92I	GRCGYC	2 cut(s)	171, 213
Hsp92II	CATG	8 cut(s)	265, 352, 511, 914, 974, 1294, 1541, 1554
KpnI	GGTACC	1 cut(s)	208
KroI	GCCGGC	1 cut(s)	142
KroNI	GCCGGC	1 cut(s)	144
Ksp22I	TGATCA	1 cut(s)	1138
Kzo9I	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
LguI	GCTCTTC	1 cut(s)	44
LmnI	GCTCC	4 cut(s)	229, 454, 1015, 1294
Lsp1109I	GCAGC	3 cut(s)	709, 1063, 1073
LweI	GCATC	3 cut(s)	576, 1084, 1088
MaeI	CTAG	2 cut(s)	396, 1464
MaeII	ACGT	4 cut(s)	213, 402, 693, 1218
MalI	GATC	6 cut(s)	540, 813, 1028, 1140, 1340, 1427
MboI	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
MboII	GAAGA	7 cut(s)	31, 473, 533, 1054, 1061, 1260, 1505
MflI	RGATCY	1 cut(s)	1338
MhlI	GDGCHC	3 cut(s)	35, 137, 1403
MluCI	AATT	4 cut(s)	422, 704, 1160, 1165
MlyI	GAGTC	2 cut(s)	12, 1194
MmeI	TCCRAC	1 cut(s)	1311
MroNI	GCCGGC	1 cut(s)	142
MroXI	GAANNNNTTC	2 cut(s)	103, 300
MseI	TTAA	5 cut(s)	989, 1116, 1122, 1193, 1545
MslI	CAYNNNNRTG	2 cut(s)	962, 1153
MspI	CCGG	2 cut(s)	143, 336
MspR9I	CCNGG	5 cut(s)	161, 928, 1152, 1260, 1433
Mva1269I	GAATGC	1 cut(s)	229
MvaI	CCWGG	5 cut(s)	161, 928, 1152, 1260, 1433
MvnI	CGCG	2 cut(s)	255, 1595
MwoI	GCNNNNNNNGC	3 cut(s)	233, 827, 1592
NaeI	GCCGGC	1 cut(s)	144
NcoI	CCATGG	3 cut(s)	261, 970, 1290
NdeI	CATATG	1 cut(s)	1405
NdeII	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
NgoMIV	GCCGGC	1 cut(s)	142
NlaIII	CATG	8 cut(s)	265, 352, 511, 914, 974, 1294, 1541, 1554
NlaIV	GGNNCC	6 cut(s)	141, 206, 247, 259, 835, 1296
NmuCI	GTSAC	8 cut(s)	86, 172, 338, 398, 433, 571, 1214, 1466
NruI	TCGCGA	1 cut(s)	1595
NspI	RCATGY	4 cut(s)	352, 511, 914, 1554
PasI	CCCWGGG	1 cut(s)	1432
PciI	ACATGT	4 cut(s)	348, 507, 910, 1550
PciSI	GCTCTTC	1 cut(s)	44
PcsI	WCGNNNNNNNCGW	1 cut(s)	143
PctI	GAATGC	1 cut(s)	229
PdiI	GCCGGC	1 cut(s)	144
PdmI	GAANNNNTTC	2 cut(s)	103, 300
PfeI	GAWTC	4 cut(s)	120, 268, 502, 523
PflMI	CCANNNNNTGG	1 cut(s)	1234
PfoI	TCCNGGA	2 cut(s)	159, 1258
PinAI	ACCGGT	1 cut(s)	335
PkrI	GCNGC	5 cut(s)	170, 724, 1063, 1078, 1536
PleI	GAGTC	2 cut(s)	12, 1193
PpsI	GAGTC	2 cut(s)	12, 1193
PpuMI	RGGWCCY	2 cut(s)	783, 1451
PscI	ACATGT	4 cut(s)	348, 507, 910, 1550
PsiI	TTATAA	1 cut(s)	962
Psp124BI	GAGCTC	2 cut(s)	35, 1403
Psp5II	RGGWCCY	2 cut(s)	783, 1451
Psp6I	CCWGG	5 cut(s)	159, 926, 1150, 1258, 1431
PspGI	CCWGG	5 cut(s)	159, 926, 1150, 1258, 1431
PspN4I	GGNNCC	6 cut(s)	141, 206, 247, 259, 835, 1296
PspPI	GGNCC	4 cut(s)	245, 783, 1208, 1451
PspPPI	RGGWCCY	2 cut(s)	783, 1451
PsrI	GAACNNNNNNTAC	2 cut(s)	868, 900
PstI	CTGCAG	1 cut(s)	828
PsuI	RGATCY	1 cut(s)	1338
RruI	TCGCGA	1 cut(s)	1595
RsaI	GTAC	2 cut(s)	206, 940
RsaNI	GTAC	2 cut(s)	205, 939
RseI	CAYNNNNRTG	2 cut(s)	962, 1153
SacI	GAGCTC	2 cut(s)	35, 1403
SapI	GCTCTTC	1 cut(s)	44
SaqAI	TTAA	5 cut(s)	989, 1116, 1122, 1193, 1545
SatI	GCNGC	5 cut(s)	169, 723, 1062, 1077, 1535
Sau3AI	GATC	6 cut(s)	538, 811, 1026, 1138, 1338, 1425
Sau96I	GGNCC	4 cut(s)	245, 783, 1208, 1451
SchI	GAGTC	2 cut(s)	12, 1194
ScrFI	CCNGG	5 cut(s)	161, 928, 1152, 1260, 1433
SduI	GDGCHC	3 cut(s)	35, 137, 1403
SfaNI	GCATC	3 cut(s)	576, 1084, 1088
SfcI	CTRYAG	1 cut(s)	824
SinI	GGWCC	4 cut(s)	245, 783, 1208, 1451
SmiMI	CAYNNNNRTG	2 cut(s)	962, 1153
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
Sse9I	AATT	4 cut(s)	422, 704, 1160, 1165
SspI	AATATT	1 cut(s)	1387
SspMI	CTAG	2 cut(s)	396, 1464
SstI	GAGCTC	2 cut(s)	35, 1403
StyD4I	CCNGG	5 cut(s)	159, 926, 1150, 1258, 1431
StyI	CCWWGG	4 cut(s)	261, 970, 1290, 1454
TaaI	ACNGT	5 cut(s)	139, 245, 344, 536, 882
TaiI	ACGT	4 cut(s)	216, 405, 696, 1221
TaqI	TCGA	3 cut(s)	210, 478, 745
TaqII	GACCGA	1 cut(s)	1196
TasI	AATT	4 cut(s)	422, 704, 1160, 1165
TauI	GCSGC	2 cut(s)	171, 1537
TfiI	GAWTC	4 cut(s)	120, 268, 502, 523
Tru1I	TTAA	5 cut(s)	989, 1116, 1122, 1193, 1545
Tru9I	TTAA	5 cut(s)	989, 1116, 1122, 1193, 1545
TscAI	CASTG	8 cut(s)	524, 566, 828, 885, 988, 1104, 1111, 1141
TseFI	GTSAC	8 cut(s)	86, 172, 338, 398, 433, 571, 1214, 1466
TseI	GCWGC	3 cut(s)	722, 1061, 1076
Tsp45I	GTSAC	8 cut(s)	86, 172, 338, 398, 433, 571, 1214, 1466
TspDTI	ATGAA	4 cut(s)	515, 906, 1193, 1425
TspRI	CASTG	8 cut(s)	524, 566, 828, 885, 988, 1104, 1111, 1141
Van91I	CCANNNNNTGG	1 cut(s)	1234
VpaK11BI	GGWCC	4 cut(s)	245, 783, 1208, 1451
XapI	RAATTY	2 cut(s)	704, 1160
XceI	RCATGY	4 cut(s)	352, 511, 914, 1554
XmnI	GAANNNNTTC	2 cut(s)	103, 300
XspI	CTAG	2 cut(s)	396, 1464
ZraI	GACGTC	1 cut(s)	214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.