Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0016171

Physical Location & Seq

Genomic Coordinates Reverse (-)

49041924 .. 49046062

Gene Structure 4139 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00254740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGTACCCTCACCACACCACACCTACAGGCGGCATAAACCTCATCTCTCTCCCCTCCTCCCTCTTCCAAGTCTCAGAGCCTCCAAAAATGGTCGTATCTCTGAGACTACCTTCTCTGAGCTCGCTCTTCTCGCCCTCCATCTCCCGCCGTTACCCGTCAGTTCTCCGCCGTCGCCACCACCTCCGCCCGCCGCCTTCCTCCGCAAGTTTCTCAGCTCAGAGCACTGCGCCGGCGACCGACGTCGTCGACAGTCGGAAGAGCAACCAGAAAGTCCAGGAAGGCGGCGTCACTCCTCGGTCACAGGACTTCAATGCTTGGTACCTCGACGTCATTGCAAATGCGGAGCTTGCAGATTACGGTCCGGTTCGCGGAACCATGGTGATTCGTCCCTACGGCTATGCTATCTGGGAAGCCATTCAGGATTATCTGAATGTGAAATTCAAGGAGACTGGTCACAGTAATATGTATTTCCCACAGCTTATACCATACTCGTTTATAGAGAAAGAAGCTAGTCATGTTGAGGGTTTTAGTCCTGAATTAGCACTGGTGACAATTGGAGGAGGGAAGGAGCTTGAAGAAAAGCTTGTGGTTCGACCGACAAGTGAAACGATAGTGAATCATATGTTCACTCAGTGGATTCATAGCCACCGTGATCTTCCGCTTATGGTTAACCAGTGGGCAAATGTCACAAGATGGGAGATGCGGACGAAACCTTTTGTGAGGACTCTTGAATTTCTCTGGCAGGAAGGCCATACTGCTCATGCCACTCCAGAGGAGGCGGAAAAAGAGGCTATACAGATGATTGACGTATATACAAAATTTGCTTATGAGGAAGCTGCAATACCTGTTATTGCAGGTCGAAAATCAAAAATGGAAACATTTGCTGGTGCTGTTAGGACCTACACAATAGAGGCTATGATGGGTGATCGGAAGGCATTGCAGGCTGGAACCAGCCACAATCTTGGGCAGAATTTCTCTCGTGCCTTTGGAACACTGTTTACTGATGAAAATGGACAGAGGCAACATGTTTGGCAGACTTCCTGGGCTGTGAGTACCCGTTTTGTTGGTGGTATTATAATGACCCATGGAGACGACACCGGTTTAATGCTTCCCCCAAAGATTGCTCCAATACAGGTGGTGATTGTACCCATTTGGAAGAAGGAAGATGATAAAGCAGGAGTTCTCAATGCTGCATCATCTGTAAAGAATGCACTGCACACTGCCGGGATTAAAGTTAAACTCGATGACACTGATCAAAGAACCCCAGGATGGAAATTTAATTTCTGGGAGATGAAGGGAGTCCCTTTAAGGATTGAAATCGGTCCTCGTGATGTATCAAGCCAGAGTGTGGTTGTATGCAGAAGAGATGTTCCTGGAAAACAAGGGAAGGTTTTTGGAATATCCATGGAGCCTTCAATTTTGGAGGCTTATATCAAGGACAAGTTGGATGAGATCCAGTCATCTCTTTTGGGACAAGCAACATCATTTTGTGATAGCAATATTGTGGATGTGAGCTCATATGATGAACTCAAAGTTGCAATCTCCCAGGGAAAATGGGCAAGAGGTCCTTGGTCAGCTAGTGACAAAGATGAGTTGAAGGTGAAAGAAGAAACAGGGGCAACCATAAGGTGTTTTCCTTTTGACCAGCCGCATGGGATTAAAACATGTTTGATGACTGGCAATCCTGCAGAGGAAGTTGCCATTTTCGCAAGGTCATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004827 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006433 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009553 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010109 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0017101 GO:0019222 GO:0019538 GO:0019752 GO:0022414 GO:0031323 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0061458 GO:0065007 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon ProRS-C_1 tRNA-synt_2b

Protein Analysis

573

Amino Acids

63.99

Weight (kDa)

6.99

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	190 - 359	7.9e-21	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	378 - 458	2.1e-16	Anticodon binding domain
ProRS-C_1	PF09180	507 - 573	1.7e-19	Prolyl-tRNA synthetase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016171)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52520
fragaria_vesca	FvH4_5g00340 FvH4_5g00340
prunus_persica	Prupe.5G076000_v2.0.a1
pyrus_communis	pycom04g07460
rosa_chinensis	RchiOBHm_Chr7g0202211
rosa_laevigata	RLG00000003616
rosa_multiflora	Rmu_sc0005017.1_g000003
rosa_roxburghii	Rroxscaffold_3G00254740
rosa_rugosa	Rorug07G0069000
rosa_samantha	Rh7AG196400 Rh7BG197600 Rh7CG207500 Rh7DG203000
rosa_wichuraiana	Rw7G017190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1076
AatII	GACGTC	2 cut(s)	243, 330
Acc36I	ACCTGC	1 cut(s)	845
Acc65I	GGTACC	1 cut(s)	318
AccB1I	GGYRCC	1 cut(s)	318
AccB7I	CCANNNNNTGG	1 cut(s)	1348
AccI	GTMKAC	1 cut(s)	246
AccII	CGCG	1 cut(s)	369
AclWI	GGATC	1 cut(s)	1447
AcsI	RAATTY	5 cut(s)	437, 731, 818, 970, 1274
AcyI	GRCGYC	3 cut(s)	240, 285, 327
AdeI	CACNNNGTG	1 cut(s)	633
AfaI	GTAC	4 cut(s)	5, 320, 1054, 1146
AfiI	CCNNNNNNNGG	4 cut(s)	29, 368, 1269, 1348
AflIII	ACRYGT	2 cut(s)	1024, 1664
AgeI	ACCGGT	1 cut(s)	1097
AgsI	TTSAA	7 cut(s)	310, 442, 575, 731, 1316, 1416, 1597
AjnI	CCWGG	5 cut(s)	273, 1040, 1264, 1372, 1545
Alw21I	GWGCWC	3 cut(s)	122, 224, 1517
Alw26I	GTCTC	4 cut(s)	76, 97, 440, 1083
AlwI	GGATC	1 cut(s)	1447
AoxI	GGCC	1 cut(s)	748
ApeKI	GCWGC	2 cut(s)	836, 1190
ApoI	RAATTY	5 cut(s)	437, 731, 818, 970, 1274
AsiGI	ACCGGT	1 cut(s)	1097
Asp700I	GAANNNNTTC	1 cut(s)	414
Asp718I	GGTACC	1 cut(s)	318
AspLEI	GCGC	1 cut(s)	229
AspS9I	GGNCC	4 cut(s)	359, 897, 1322, 1565
AsuC2I	CCSGG	1 cut(s)	1225
AsuHPI	GGTGA	5 cut(s)	391, 559, 935, 1150, 1612
AvaII	GGWCC	4 cut(s)	359, 897, 1322, 1565
BanI	GGYRCC	1 cut(s)	318
BanII	GRGCYC	2 cut(s)	122, 1517
BarI	GAAGNNNNNNTAC	2 cut(s)	825, 857
BauI	CACGAG	2 cut(s)	978, 1326
Bbv12I	GWGCWC	3 cut(s)	122, 224, 1517
BbvI	GCAGC	2 cut(s)	823, 1177
BccI	CCATC	4 cut(s)	146, 687, 913, 1263
BceAI	ACGGC	3 cut(s)	132, 153, 409
BcgI	CGANNNNNNTGC	2 cut(s)	314, 348
BciT130I	CCWGG	5 cut(s)	275, 1042, 1266, 1374, 1547
BclI	TGATCA	1 cut(s)	1252
BcnI	CCSGG	1 cut(s)	1225
BcoDI	GTCTC	4 cut(s)	76, 97, 440, 1083
BfaI	CTAG	2 cut(s)	510, 1578
BfmI	CTRYAG	2 cut(s)	24, 1686
BfuAI	ACCTGC	1 cut(s)	845
BisI	GCNGC	6 cut(s)	31, 191, 283, 837, 1191, 1649
BlsI	GCNGC	6 cut(s)	32, 192, 284, 838, 1192, 1650
Bme1390I	CCNGG	6 cut(s)	275, 1042, 1225, 1266, 1374, 1547
Bme18I	GGWCC	4 cut(s)	359, 897, 1322, 1565
BmgT120I	GGNCC	4 cut(s)	359, 897, 1322, 1565
BmiI	GGNNCC	4 cut(s)	320, 373, 949, 1410
BmrFI	CCNGG	6 cut(s)	275, 1042, 1225, 1266, 1374, 1547
BmsI	GCATC	2 cut(s)	690, 1202
BoxI	GACNNNNGTC	1 cut(s)	239
BpmI	CTGGAG	1 cut(s)	753
BpuMI	CCSGG	1 cut(s)	1225
BsaBI	GATNNNNATC	1 cut(s)	1316
BsaHI	GRCGYC	3 cut(s)	240, 285, 327
BsaJI	CCNNGG	9 cut(s)	293, 375, 1041, 1084, 1264, 1404, 1545, 1546, 1568
BsaWI	WCCGGW	2 cut(s)	361, 1097
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 368, 1269, 1348
Bse118I	RCCGGY	2 cut(s)	229, 1097
Bse1I	ACTGG	5 cut(s)	454, 549, 673, 1456, 1681
Bse3DI	GCAATG	2 cut(s)	330, 935
Bse8I	GATNNNNATC	1 cut(s)	1316
BseBI	CCWGG	5 cut(s)	275, 1042, 1266, 1374, 1547
BseDI	CCNNGG	9 cut(s)	293, 375, 1041, 1084, 1264, 1404, 1545, 1546, 1568
BseGI	GGATG	3 cut(s)	1274, 1453, 1513
BseJI	GATNNNNATC	1 cut(s)	1316
BseLI	CCNNNNNNNGG	4 cut(s)	29, 368, 1269, 1348
BseMI	GCAATG	2 cut(s)	330, 935
BseMII	CTCAG	6 cut(s)	87, 92, 107, 225, 230, 644
BseNI	ACTGG	5 cut(s)	454, 549, 673, 1456, 1681
BseRI	GAGGAG	4 cut(s)	46, 282, 573, 788
BseXI	GCAGC	2 cut(s)	823, 1177
BsgI	GTGCAG	1 cut(s)	1199
Bsh1236I	CGCG	1 cut(s)	369
Bsh1285I	CGRYCG	2 cut(s)	237, 596
BshFI	GGCC	1 cut(s)	750
BshNI	GGYRCC	1 cut(s)	318
BshTI	ACCGGT	1 cut(s)	1097
BsiEI	CGRYCG	2 cut(s)	237, 596
BsiHKAI	GWGCWC	3 cut(s)	122, 224, 1517
BsiSI	CCGG	4 cut(s)	230, 362, 1098, 1224
BslFI	GGGAC	3 cut(s)	372, 1286, 1485
BslI	CCNNNNNNNGG	4 cut(s)	29, 368, 1269, 1348
BsmAI	GTCTC	4 cut(s)	76, 97, 440, 1083
BsmBI	CGTCTC	1 cut(s)	1083
BsmFI	GGGAC	3 cut(s)	372, 1286, 1485
BsmI	GAATGC	1 cut(s)	1213
BsnI	GGCC	1 cut(s)	750
Bsp1286I	GDGCHC	3 cut(s)	122, 224, 1517
Bsp143I	GATC	4 cut(s)	652, 925, 1252, 1452
Bsp19I	CCATGG	3 cut(s)	375, 1084, 1404
BspANI	GGCC	1 cut(s)	750
BspCNI	CTCAG	6 cut(s)	86, 93, 108, 224, 229, 643
BspFNI	CGCG	1 cut(s)	369
BspLI	GGNNCC	4 cut(s)	320, 373, 949, 1410
BspMAI	CTGCAG	1 cut(s)	1690
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	1 cut(s)	1447
BspQI	GCTCTTC	2 cut(s)	131, 251
BspT107I	GGYRCC	1 cut(s)	318
BsrDI	GCAATG	2 cut(s)	330, 935
BsrFI	RCCGGY	2 cut(s)	229, 1097
BsrI	ACTGG	5 cut(s)	454, 549, 673, 1456, 1681
BssAI	RCCGGY	2 cut(s)	229, 1097
BssECI	CCNNGG	9 cut(s)	293, 375, 1041, 1084, 1264, 1404, 1545, 1546, 1568
BssMI	GATC	4 cut(s)	652, 925, 1252, 1452
BssNI	GRCGYC	3 cut(s)	240, 285, 327
BssSI	CACGAG	2 cut(s)	978, 1326
BssT1I	CCWWGG	4 cut(s)	375, 1084, 1404, 1568
Bst2BI	CACGAG	2 cut(s)	978, 1326
Bst2UI	CCWGG	5 cut(s)	275, 1042, 1266, 1374, 1547
Bst4CI	ACNGT	5 cut(s)	251, 359, 458, 650, 996
Bst6I	CTCTTC	4 cut(s)	68, 131, 251, 1357
BstACI	GRCGYC	3 cut(s)	240, 285, 327
BstC8I	GCNNGC	5 cut(s)	122, 188, 231, 348, 942
BstDEI	CTNAG	6 cut(s)	73, 101, 116, 211, 216, 630
BstDSI	CCRYGG	3 cut(s)	375, 1084, 1404
BstF5I	GGATG	3 cut(s)	1274, 1453, 1513
BstFNI	CGCG	1 cut(s)	369
BstHHI	GCGC	1 cut(s)	229
BstKTI	GATC	4 cut(s)	655, 928, 1255, 1455
BstMAI	GTCTC	4 cut(s)	76, 97, 440, 1083
BstMBI	GATC	4 cut(s)	652, 925, 1252, 1452
BstMCI	CGRYCG	2 cut(s)	237, 596
BstMWI	GCNNNNNNNGC	4 cut(s)	130, 347, 941, 1706
BstNI	CCWGG	5 cut(s)	275, 1042, 1266, 1374, 1547
BstNSI	RCATGY	2 cut(s)	1028, 1668
BstPAI	GACNNNNGTC	1 cut(s)	239
BstSCI	CCNGG	6 cut(s)	273, 1040, 1223, 1264, 1372, 1545
BstSFI	CTRYAG	2 cut(s)	24, 1686
BstUI	CGCG	1 cut(s)	369
BstV1I	GCAGC	2 cut(s)	823, 1177
BstX2I	RGATCY	1 cut(s)	1452
BstXI	CCANNNNNNTGG	2 cut(s)	962, 1652
BstYI	RGATCY	1 cut(s)	1452
BsuRI	GGCC	1 cut(s)	750
BtgI	CCRYGG	3 cut(s)	375, 1084, 1404
BtsCI	GGATG	3 cut(s)	1274, 1453, 1513
BtsI	GCAGTG	3 cut(s)	222, 1211, 1218
BtsIMutI	CAGTG	8 cut(s)	222, 542, 638, 680, 992, 1211, 1218, 1248
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	5 cut(s)	122, 188, 231, 348, 942
CfoI	GCGC	1 cut(s)	229
Cfr10I	RCCGGY	2 cut(s)	229, 1097
Cfr13I	GGNCC	4 cut(s)	359, 897, 1322, 1565
CpoI	CGGWCCG	1 cut(s)	359
CseI	GACGC	1 cut(s)	274
Csp6I	GTAC	4 cut(s)	4, 319, 1053, 1145
CspAI	ACCGGT	1 cut(s)	1097
CspCI	CAANNNNNGTGG	2 cut(s)	1116, 1151
CspI	CGGWCCG	1 cut(s)	359
CviAII	CATG	8 cut(s)	376, 515, 761, 1025, 1085, 1405, 1652, 1665
CviQI	GTAC	4 cut(s)	4, 319, 1053, 1145
DdeI	CTNAG	6 cut(s)	73, 101, 116, 211, 216, 630
DpnI	GATC	4 cut(s)	654, 927, 1254, 1454
DpnII	GATC	4 cut(s)	652, 925, 1252, 1452
DraIII	CACNNNGTG	1 cut(s)	633
Eam1104I	CTCTTC	4 cut(s)	68, 131, 251, 1357
EarI	CTCTTC	4 cut(s)	68, 131, 251, 1357
EciI	GGCGGA	3 cut(s)	155, 173, 794
Ecl136II	GAGCTC	2 cut(s)	120, 1515
Eco130I	CCWWGG	4 cut(s)	375, 1084, 1404, 1568
Eco24I	GRGCYC	2 cut(s)	122, 1517
Eco47I	GGWCC	4 cut(s)	359, 897, 1322, 1565
Eco53kI	GAGCTC	2 cut(s)	120, 1515
EcoICRI	GAGCTC	2 cut(s)	120, 1515
EcoO109I	RGGNCCY	2 cut(s)	897, 1565
EcoRII	CCWGG	5 cut(s)	273, 1040, 1264, 1372, 1545
EcoT14I	CCWWGG	4 cut(s)	375, 1084, 1404, 1568
EcoT38I	GRGCYC	2 cut(s)	122, 1517
ErhI	CCWWGG	4 cut(s)	375, 1084, 1404, 1568
Esp3I	CGTCTC	1 cut(s)	1083
FaeI	CATG	8 cut(s)	379, 518, 764, 1028, 1088, 1408, 1655, 1668
FalI	AAGNNNNNCTT	4 cut(s)	567, 599, 1552, 1584
FaqI	GGGAC	3 cut(s)	372, 1286, 1485
FatI	CATG	8 cut(s)	375, 514, 760, 1024, 1084, 1404, 1651, 1664
FauI	CCCGC	2 cut(s)	152, 195
FauNDI	CATATG	2 cut(s)	621, 1519
FbaI	TGATCA	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	246
Fnu4HI	GCNGC	6 cut(s)	31, 191, 283, 837, 1191, 1649
FokI	GGATG	3 cut(s)	1281, 1460, 1520
FriOI	GRGCYC	2 cut(s)	122, 1517
Fsp4HI	GCNGC	6 cut(s)	31, 191, 283, 837, 1191, 1649
FspBI	CTAG	2 cut(s)	510, 1578
GlaI	GCGC	1 cut(s)	228
GluI	GCNGC	6 cut(s)	31, 191, 283, 837, 1191, 1649
GsuI	CTGGAG	1 cut(s)	753
HaeIII	GGCC	1 cut(s)	750
HapII	CCGG	4 cut(s)	230, 362, 1098, 1224
HgaI	GACGC	1 cut(s)	274
HhaI	GCGC	1 cut(s)	229
Hin1I	GRCGYC	3 cut(s)	240, 285, 327
Hin1II	CATG	8 cut(s)	379, 518, 764, 1028, 1088, 1408, 1655, 1668
Hin6I	GCGC	1 cut(s)	227
HinP1I	GCGC	1 cut(s)	227
HincII	GTYRAC	2 cut(s)	247, 670
HindII	GTYRAC	2 cut(s)	247, 670
HindIII	AAGCTT	1 cut(s)	581
HinfI	GANTC	5 cut(s)	382, 616, 637, 724, 1299
HpaI	GTTAAC	1 cut(s)	670
HpaII	CCGG	4 cut(s)	230, 362, 1098, 1224
HphI	GGTGA	5 cut(s)	391, 559, 935, 1150, 1612
Hpy166II	GTNNAC	4 cut(s)	247, 627, 670, 999
Hpy188I	TCNGA	7 cut(s)	76, 102, 117, 219, 255, 429, 930
Hpy188III	TCNNGA	5 cut(s)	419, 533, 728, 770, 1328
Hpy8I	GTNNAC	4 cut(s)	247, 627, 670, 999
Hpy99I	CGWCG	5 cut(s)	174, 242, 245, 248, 329
HpyCH4III	ACNGT	5 cut(s)	251, 359, 458, 650, 996
HpyCH4IV	ACGT	3 cut(s)	240, 327, 807
HpyF10VI	GCNNNNNNNGC	4 cut(s)	130, 347, 941, 1706
HpyF3I	CTNAG	6 cut(s)	73, 101, 116, 211, 216, 630
HpySE526I	ACGT	3 cut(s)	240, 327, 807
Hsp92I	GRCGYC	3 cut(s)	240, 285, 327
Hsp92II	CATG	8 cut(s)	379, 518, 764, 1028, 1088, 1408, 1655, 1668
HspAI	GCGC	1 cut(s)	227
KpnI	GGTACC	1 cut(s)	322
KroI	GCCGGC	1 cut(s)	229
KroNI	GCCGGC	1 cut(s)	231
Ksp22I	TGATCA	1 cut(s)	1252
KspAI	GTTAAC	1 cut(s)	670
Kzo9I	GATC	4 cut(s)	652, 925, 1252, 1452
LguI	GCTCTTC	2 cut(s)	131, 251
LmnI	GCTCC	4 cut(s)	343, 568, 1129, 1408
Lsp1109I	GCAGC	2 cut(s)	823, 1177
LweI	GCATC	2 cut(s)	690, 1202
MaeI	CTAG	2 cut(s)	510, 1578
MaeII	ACGT	3 cut(s)	240, 327, 807
MaeIII	GTNAC	7 cut(s)	149, 286, 297, 452, 547, 685, 1580
MalI	GATC	4 cut(s)	654, 927, 1254, 1454
MboI	GATC	4 cut(s)	652, 925, 1252, 1452
MboII	GAAGA	9 cut(s)	55, 118, 268, 587, 647, 1168, 1175, 1374, 1619
MfeI	CAATTG	1 cut(s)	552
MflI	RGATCY	1 cut(s)	1452
MhlI	GDGCHC	3 cut(s)	122, 224, 1517
MluCI	AATT	9 cut(s)	437, 536, 552, 731, 818, 970, 1274, 1279, 1416
MlyI	GAGTC	2 cut(s)	718, 1308
MmeI	TCCRAC	2 cut(s)	233, 1425
MreI	CGCCGGCG	1 cut(s)	229
MroNI	GCCGGC	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	414
MseI	TTAA	7 cut(s)	669, 1103, 1230, 1236, 1278, 1307, 1659
MspI	CCGG	4 cut(s)	230, 362, 1098, 1224
MspR9I	CCNGG	6 cut(s)	275, 1042, 1225, 1266, 1374, 1547
MunI	CAATTG	1 cut(s)	552
Mva1269I	GAATGC	1 cut(s)	1213
MvaI	CCWGG	5 cut(s)	275, 1042, 1266, 1374, 1547
MvnI	CGCG	1 cut(s)	369
MwoI	GCNNNNNNNGC	4 cut(s)	130, 347, 941, 1706
NaeI	GCCGGC	1 cut(s)	231
NciI	CCSGG	1 cut(s)	1225
NcoI	CCATGG	3 cut(s)	375, 1084, 1404
NdeI	CATATG	2 cut(s)	621, 1519
NdeII	GATC	4 cut(s)	652, 925, 1252, 1452
NgoMIV	GCCGGC	1 cut(s)	229
NlaIII	CATG	8 cut(s)	379, 518, 764, 1028, 1088, 1408, 1655, 1668
NlaIV	GGNNCC	4 cut(s)	320, 373, 949, 1410
NmuCI	GTSAC	6 cut(s)	286, 297, 452, 547, 685, 1580
NspI	RCATGY	2 cut(s)	1028, 1668
PasI	CCCWGGG	1 cut(s)	1546
PciI	ACATGT	2 cut(s)	1024, 1664
PciSI	GCTCTTC	2 cut(s)	131, 251
PctI	GAATGC	1 cut(s)	1213
PdiI	GCCGGC	1 cut(s)	231
PdmI	GAANNNNTTC	1 cut(s)	414
PfeI	GAWTC	3 cut(s)	382, 616, 637
PflFI	GACNNNGTC	1 cut(s)	242
PflMI	CCANNNNNTGG	1 cut(s)	1348
PfoI	TCCNGGA	2 cut(s)	273, 1372
PinAI	ACCGGT	1 cut(s)	1097
PkrI	GCNGC	6 cut(s)	32, 192, 284, 838, 1192, 1650
PleI	GAGTC	2 cut(s)	718, 1307
PpsI	GAGTC	2 cut(s)	718, 1307
PpuMI	RGGWCCY	2 cut(s)	897, 1565
PscI	ACATGT	2 cut(s)	1024, 1664
PshAI	GACNNNNGTC	1 cut(s)	239
PsiI	TTATAA	1 cut(s)	1076
Psp124BI	GAGCTC	2 cut(s)	122, 1517
Psp5II	RGGWCCY	2 cut(s)	897, 1565
Psp6I	CCWGG	5 cut(s)	273, 1040, 1264, 1372, 1545
PspGI	CCWGG	5 cut(s)	273, 1040, 1264, 1372, 1545
PspN4I	GGNNCC	4 cut(s)	320, 373, 949, 1410
PspPI	GGNCC	4 cut(s)	359, 897, 1322, 1565
PspPPI	RGGWCCY	2 cut(s)	897, 1565
PsrI	GAACNNNNNNTAC	2 cut(s)	982, 1014
PstI	CTGCAG	1 cut(s)	1690
PsuI	RGATCY	1 cut(s)	1452
PsyI	GACNNNGTC	1 cut(s)	242
RsaI	GTAC	4 cut(s)	5, 320, 1054, 1146
RsaNI	GTAC	4 cut(s)	4, 319, 1053, 1145
Rsr2I	CGGWCCG	1 cut(s)	359
RsrII	CGGWCCG	1 cut(s)	359
SacI	GAGCTC	2 cut(s)	122, 1517
SalI	GTCGAC	1 cut(s)	245
SapI	GCTCTTC	2 cut(s)	131, 251
SaqAI	TTAA	7 cut(s)	669, 1103, 1230, 1236, 1278, 1307, 1659
SatI	GCNGC	6 cut(s)	31, 191, 283, 837, 1191, 1649
Sau3AI	GATC	4 cut(s)	652, 925, 1252, 1452
Sau96I	GGNCC	4 cut(s)	359, 897, 1322, 1565
SchI	GAGTC	2 cut(s)	718, 1308
ScrFI	CCNGG	6 cut(s)	275, 1042, 1225, 1266, 1374, 1547
SduI	GDGCHC	3 cut(s)	122, 224, 1517
SfaNI	GCATC	2 cut(s)	690, 1202
SfcI	CTRYAG	2 cut(s)	24, 1686
SgrAI	CRCCGGYG	1 cut(s)	229
SinI	GGWCC	4 cut(s)	359, 897, 1322, 1565
Sse9I	AATT	9 cut(s)	437, 536, 552, 731, 818, 970, 1274, 1279, 1416
SspI	AATATT	1 cut(s)	1501
SspMI	CTAG	2 cut(s)	510, 1578
SstI	GAGCTC	2 cut(s)	122, 1517
StyD4I	CCNGG	6 cut(s)	273, 1040, 1223, 1264, 1372, 1545
StyI	CCWWGG	4 cut(s)	375, 1084, 1404, 1568
TaaI	ACNGT	5 cut(s)	251, 359, 458, 650, 996
TaiI	ACGT	3 cut(s)	243, 330, 810
TaqI	TCGA	5 cut(s)	246, 324, 592, 859, 1242
TaqII	GACCGA	4 cut(s)	251, 285, 610, 1310
TasI	AATT	9 cut(s)	437, 536, 552, 731, 818, 970, 1274, 1279, 1416
TauI	GCSGC	4 cut(s)	33, 193, 285, 1651
TfiI	GAWTC	3 cut(s)	382, 616, 637
Tru1I	TTAA	7 cut(s)	669, 1103, 1230, 1236, 1278, 1307, 1659
Tru9I	TTAA	7 cut(s)	669, 1103, 1230, 1236, 1278, 1307, 1659
TscAI	CASTG	8 cut(s)	229, 549, 638, 680, 999, 1218, 1225, 1255
TseFI	GTSAC	6 cut(s)	286, 297, 452, 547, 685, 1580
TseI	GCWGC	2 cut(s)	836, 1190
Tsp45I	GTSAC	6 cut(s)	286, 297, 452, 547, 685, 1580
TspDTI	ATGAA	4 cut(s)	629, 1020, 1307, 1539
TspRI	CASTG	8 cut(s)	229, 549, 638, 680, 999, 1218, 1225, 1255
Tth111I	GACNNNGTC	1 cut(s)	242
Van91I	CCANNNNNTGG	1 cut(s)	1348
VpaK11BI	GGWCC	4 cut(s)	359, 897, 1322, 1565
XapI	RAATTY	5 cut(s)	437, 731, 818, 970, 1274
XceI	RCATGY	2 cut(s)	1028, 1668
XmiI	GTMKAC	1 cut(s)	246
XmnI	GAANNNNTTC	1 cut(s)	414
XspI	CTAG	2 cut(s)	510, 1578
ZraI	GACGTC	2 cut(s)	241, 328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.