BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07330 AT1G07330 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT5G58880 |
| fragaria_vesca | FvH4_3g38180 |
| malus_domestica | MD03G1075800.v1.1 MD11G1080500.v1.1 |
| prunus_persica | Prupe.6G060900_v2.0.a1 |
| pyrus_communis | pycom03g06030 |
| rosa_chinensis | RchiOBHm_Chr5g0068611 |
| rosa_laevigata | RLG00000035984 |
| rosa_roxburghii | Rroxscaffold_1G00012270 |
| rosa_rugosa | Rorug05G0391800 Rorug05G0391900 |
| rosa_samantha | Rh5AG449500 Rh5BG467700 Rh5CG489500 Rh5DG481100 |
| rosa_wichuraiana | Rw5G041970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1760 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1151, 1345 |
| AccI | GTMKAC | 2 cut(s) | 1568, 2273 |
| AccII | CGCG | 2 cut(s) | 1623, 3035 |
| AciI | CCGC | 5 cut(s) | 1316, 1621, 3033, 3035, 3224 |
| AclI | AACGTT | 2 cut(s) | 525, 1096 |
| AclWI | GGATC | 4 cut(s) | 905, 1687, 2101, 3223 |
| AcsI | RAATTY | 5 cut(s) | 42, 74, 1468, 2035, 2503 |
| AcuI | CTGAAG | 2 cut(s) | 750, 1056 |
| AcyI | GRCGYC | 1 cut(s) | 1953 |
| AfaI | GTAC | 4 cut(s) | 409, 829, 1708, 2241 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1151, 1345 |
| AflIII | ACRYGT | 2 cut(s) | 1039, 1443 |
| AgeI | ACCGGT | 1 cut(s) | 175 |
| AhlI | ACTAGT | 1 cut(s) | 2012 |
| AjnI | CCWGG | 1 cut(s) | 853 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1125, 1157 |
| Alw21I | GWGCWC | 2 cut(s) | 193, 1323 |
| Alw26I | GTCTC | 7 cut(s) | 432, 643, 679, 1229, 1653, 1996, 3010 |
| AlwI | GGATC | 4 cut(s) | 905, 1687, 2101, 3223 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1067 |
| Ama87I | CYCGRG | 1 cut(s) | 204 |
| AoxI | GGCC | 2 cut(s) | 1719, 2664 |
| ApeKI | GCWGC | 1 cut(s) | 3056 |
| ApoI | RAATTY | 5 cut(s) | 42, 74, 1468, 2035, 2503 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 3240 |
| AsiGI | ACCGGT | 1 cut(s) | 175 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 814, 1041, 1486, 3081 |
| AspLEI | GCGC | 1 cut(s) | 1423 |
| AsuC2I | CCSGG | 3 cut(s) | 92, 1359, 2322 |
| AsuHPI | GGTGA | 9 cut(s) | 165, 1023, 1524, 1589, 2541, 2636, 2721, 2928, 2947 |
| AsuII | TTCGAA | 1 cut(s) | 420 |
| AvaI | CYCGRG | 1 cut(s) | 204 |
| AxyI | CCTNAGG | 1 cut(s) | 1716 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 819, 852 |
| BanII | GRGCYC | 1 cut(s) | 1323 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2905, 2937 |
| BauI | CACGAG | 2 cut(s) | 122, 504 |
| BbsI | GAAGAC | 5 cut(s) | 474, 1179, 1758, 2432, 3186 |
| Bbv12I | GWGCWC | 2 cut(s) | 193, 1323 |
| BbvI | GCAGC | 1 cut(s) | 3043 |
| BccI | CCATC | 4 cut(s) | 569, 818, 1943, 2711 |
| BceAI | ACGGC | 1 cut(s) | 1287 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2966, 3000 |
| BciT130I | CCWGG | 1 cut(s) | 855 |
| BciVI | GTATCC | 1 cut(s) | 2813 |
| BclI | TGATCA | 5 cut(s) | 952, 1123, 2125, 2569, 2749 |
| BcnI | CCSGG | 3 cut(s) | 92, 1359, 2322 |
| BcoDI | GTCTC | 7 cut(s) | 432, 643, 679, 1229, 1653, 1996, 3010 |
| BcuI | ACTAGT | 1 cut(s) | 2012 |
| BfmI | CTRYAG | 1 cut(s) | 2334 |
| BfoI | RGCGCY | 1 cut(s) | 1424 |
| BfuI | GTATCC | 1 cut(s) | 2813 |
| BglII | AGATCT | 1 cut(s) | 2577 |
| BisI | GCNGC | 2 cut(s) | 3036, 3057 |
| BlpI | GCTNAGC | 1 cut(s) | 859 |
| BlsI | GCNGC | 2 cut(s) | 3037, 3058 |
| BmcAI | AGTACT | 1 cut(s) | 1708 |
| Bme1390I | CCNGG | 4 cut(s) | 92, 855, 1359, 2322 |
| BmeT110I | CYCGRG | 1 cut(s) | 204 |
| BmrFI | CCNGG | 4 cut(s) | 92, 855, 1359, 2322 |
| BmrI | ACTGGG | 1 cut(s) | 1055 |
| BmsI | GCATC | 4 cut(s) | 78, 266, 2185, 2456 |
| BmuI | ACTGGG | 1 cut(s) | 1055 |
| BoxI | GACNNNNGTC | 1 cut(s) | 655 |
| BpiI | GAAGAC | 5 cut(s) | 474, 1179, 1758, 2432, 3186 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1633, 1665, 2446, 2478 |
| BpmI | CTGGAG | 2 cut(s) | 960, 2004 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1322 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 859 |
| Bpu14I | TTCGAA | 1 cut(s) | 420 |
| BpuEI | CTTGAG | 3 cut(s) | 214, 900, 2994 |
| BpuMI | CCSGG | 3 cut(s) | 92, 1359, 2322 |
| Bsa29I | ATCGAT | 1 cut(s) | 1947 |
| BsaAI | YACGTR | 1 cut(s) | 1637 |
| BsaHI | GRCGYC | 1 cut(s) | 1953 |
| BsaI | GGTCTC | 1 cut(s) | 1996 |
| BsaJI | CCNNGG | 7 cut(s) | 400, 1344, 1497, 2028, 2815, 2926, 3033 |
| BsaWI | WCCGGW | 1 cut(s) | 175 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 483, 513, 1125, 1155 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1151, 1345 |
| Bse118I | RCCGGY | 1 cut(s) | 175 |
| Bse1I | ACTGG | 6 cut(s) | 943, 1061, 1568, 1576, 1836, 1987 |
| Bse21I | CCTNAGG | 1 cut(s) | 1716 |
| Bse3DI | GCAATG | 2 cut(s) | 2412, 2464 |
| BseBI | CCWGG | 1 cut(s) | 855 |
| BseCI | ATCGAT | 1 cut(s) | 1947 |
| BseDI | CCNNGG | 7 cut(s) | 400, 1344, 1497, 2028, 2815, 2926, 3033 |
| BseGI | GGATG | 2 cut(s) | 1650, 2200 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1151, 1345 |
| BseMI | GCAATG | 2 cut(s) | 2412, 2464 |
| BseMII | CTCAG | 4 cut(s) | 873, 1336, 1707, 2268 |
| BseNI | ACTGG | 6 cut(s) | 943, 1061, 1568, 1576, 1836, 1987 |
| BseRI | GAGGAG | 4 cut(s) | 279, 402, 697, 1703 |
| BseXI | GCAGC | 1 cut(s) | 3043 |
| BseYI | CCCAGC | 1 cut(s) | 2958 |
| BsgI | GTGCAG | 1 cut(s) | 3134 |
| Bsh1236I | CGCG | 2 cut(s) | 1623, 3035 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1947 |
| BshFI | GGCC | 2 cut(s) | 1721, 2666 |
| BshTI | ACCGGT | 1 cut(s) | 175 |
| BshVI | ATCGAT | 1 cut(s) | 1947 |
| BsiEI | CGRYCG | 1 cut(s) | 1947 |
| BsiHKAI | GWGCWC | 2 cut(s) | 193, 1323 |
| BsiHKCI | CYCGRG | 1 cut(s) | 204 |
| BsiSI | CCGG | 4 cut(s) | 92, 176, 1359, 2321 |
| BslFI | GGGAC | 1 cut(s) | 2337 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1151, 1345 |
| BsmAI | GTCTC | 7 cut(s) | 432, 643, 679, 1229, 1653, 1996, 3010 |
| BsmBI | CGTCTC | 2 cut(s) | 679, 3010 |
| BsmFI | GGGAC | 1 cut(s) | 2337 |
| BsmI | GAATGC | 1 cut(s) | 2157 |
| BsnI | GGCC | 2 cut(s) | 1721, 2666 |
| Bso31I | GGTCTC | 1 cut(s) | 1996 |
| BsoBI | CYCGRG | 1 cut(s) | 204 |
| Bsp119I | TTCGAA | 1 cut(s) | 420 |
| Bsp1286I | GDGCHC | 2 cut(s) | 193, 1323 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 859 |
| Bsp19I | CCATGG | 2 cut(s) | 1344, 2028 |
| BspACI | CCGC | 5 cut(s) | 1316, 1621, 3033, 3035, 3224 |
| BspANI | GGCC | 2 cut(s) | 1721, 2666 |
| BspCNI | CTCAG | 4 cut(s) | 872, 1335, 1708, 2269 |
| BspDI | ATCGAT | 1 cut(s) | 1947 |
| BspFNI | CGCG | 2 cut(s) | 1623, 3035 |
| BspHI | TCATGA | 2 cut(s) | 78, 1000 |
| BspPI | GGATC | 4 cut(s) | 905, 1687, 2101, 3223 |
| BspQI | GCTCTTC | 1 cut(s) | 670 |
| BspT104I | TTCGAA | 1 cut(s) | 420 |
| BspTNI | GGTCTC | 1 cut(s) | 1996 |
| BsrDI | GCAATG | 2 cut(s) | 2412, 2464 |
| BsrFI | RCCGGY | 1 cut(s) | 175 |
| BsrI | ACTGG | 6 cut(s) | 943, 1061, 1568, 1576, 1836, 1987 |
| BssAI | RCCGGY | 1 cut(s) | 175 |
| BssECI | CCNNGG | 7 cut(s) | 400, 1344, 1497, 2028, 2815, 2926, 3033 |
| BssNI | GRCGYC | 1 cut(s) | 1953 |
| BssSI | CACGAG | 2 cut(s) | 122, 504 |
| BssT1I | CCWWGG | 5 cut(s) | 400, 1344, 2028, 2815, 2926 |
| Bst2BI | CACGAG | 2 cut(s) | 122, 504 |
| Bst2UI | CCWGG | 1 cut(s) | 855 |
| Bst4CI | ACNGT | 9 cut(s) | 551, 781, 835, 1478, 1546, 1765, 2472, 2907, 3004 |
| Bst6I | CTCTTC | 9 cut(s) | 248, 351, 417, 670, 1800, 2306, 2358, 2415, 2995 |
| BstACI | GRCGYC | 1 cut(s) | 1953 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2684 |
| BstBAI | YACGTR | 1 cut(s) | 1637 |
| BstBI | TTCGAA | 1 cut(s) | 420 |
| BstC8I | GCNNGC | 1 cut(s) | 1456 |
| BstDSI | CCRYGG | 3 cut(s) | 1344, 2028, 3033 |
| BstF5I | GGATG | 2 cut(s) | 1650, 2200 |
| BstFNI | CGCG | 2 cut(s) | 1623, 3035 |
| BstH2I | RGCGCY | 1 cut(s) | 1424 |
| BstHHI | GCGC | 1 cut(s) | 1423 |
| BstMAI | GTCTC | 7 cut(s) | 432, 643, 679, 1229, 1653, 1996, 3010 |
| BstMCI | CGRYCG | 1 cut(s) | 1947 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 2684, 2968, 3041 |
| BstNI | CCWGG | 1 cut(s) | 855 |
| BstNSI | RCATGY | 3 cut(s) | 189, 1043, 1447 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 655 |
| BstSCI | CCNGG | 4 cut(s) | 90, 853, 1357, 2320 |
| BstSFI | CTRYAG | 1 cut(s) | 2334 |
| BstUI | CGCG | 2 cut(s) | 1623, 3035 |
| BstV1I | GCAGC | 1 cut(s) | 3043 |
| BstV2I | GAAGAC | 5 cut(s) | 474, 1179, 1758, 2432, 3186 |
| BstX2I | RGATCY | 3 cut(s) | 2093, 2577, 3228 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3161 |
| BstYI | RGATCY | 3 cut(s) | 2093, 2577, 3228 |
| Bsu15I | ATCGAT | 1 cut(s) | 1947 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1716 |
| BsuI | GTATCC | 1 cut(s) | 2813 |
| BsuRI | GGCC | 2 cut(s) | 1721, 2666 |
| BsuTUI | ATCGAT | 1 cut(s) | 1947 |
| BtgI | CCRYGG | 3 cut(s) | 1344, 2028, 3033 |
| BtgZI | GCGATG | 1 cut(s) | 1638 |
| BtsCI | GGATG | 2 cut(s) | 1650, 2200 |
| BtsI | GCAGTG | 1 cut(s) | 3146 |
| BtsIMutI | CAGTG | 4 cut(s) | 1052, 1843, 2912, 3146 |
| Cac8I | GCNNGC | 1 cut(s) | 1456 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1067 |
| CciI | TCATGA | 2 cut(s) | 78, 1000 |
| CfoI | GCGC | 1 cut(s) | 1423 |
| Cfr10I | RCCGGY | 1 cut(s) | 175 |
| Cfr42I | CCGCGG | 1 cut(s) | 3036 |
| ClaI | ATCGAT | 1 cut(s) | 1947 |
| CseI | GACGC | 2 cut(s) | 696, 1942 |
| Csp6I | GTAC | 4 cut(s) | 408, 828, 1707, 2240 |
| CspAI | ACCGGT | 1 cut(s) | 175 |
| CviQI | GTAC | 4 cut(s) | 408, 828, 1707, 2240 |
| DraI | TTTAAA | 2 cut(s) | 285, 1308 |
| Eam1104I | CTCTTC | 9 cut(s) | 248, 351, 417, 670, 1800, 2306, 2358, 2415, 2995 |
| EarI | CTCTTC | 9 cut(s) | 248, 351, 417, 670, 1800, 2306, 2358, 2415, 2995 |
| Ecl136II | GAGCTC | 1 cut(s) | 1321 |
| Eco130I | CCWWGG | 5 cut(s) | 400, 1344, 2028, 2815, 2926 |
| Eco147I | AGGCCT | 1 cut(s) | 2666 |
| Eco24I | GRGCYC | 1 cut(s) | 1323 |
| Eco31I | GGTCTC | 1 cut(s) | 1996 |
| Eco32I | GATATC | 3 cut(s) | 2119, 2934, 3016 |
| Eco53kI | GAGCTC | 1 cut(s) | 1321 |
| Eco57I | CTGAAG | 2 cut(s) | 750, 1056 |
| Eco81I | CCTNAGG | 1 cut(s) | 1716 |
| Eco88I | CYCGRG | 1 cut(s) | 204 |
| EcoICRI | GAGCTC | 1 cut(s) | 1321 |
| EcoRII | CCWGG | 1 cut(s) | 853 |
| EcoRV | GATATC | 3 cut(s) | 2119, 2934, 3016 |
| EcoT14I | CCWWGG | 5 cut(s) | 400, 1344, 2028, 2815, 2926 |
| EcoT38I | GRGCYC | 1 cut(s) | 1323 |
| ErhI | CCWWGG | 5 cut(s) | 400, 1344, 2028, 2815, 2926 |
| Esp3I | CGTCTC | 2 cut(s) | 679, 3010 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 877, 909, 2174, 2206 |
| FaqI | GGGAC | 1 cut(s) | 2337 |
| FbaI | TGATCA | 5 cut(s) | 952, 1123, 2125, 2569, 2749 |
| FblI | GTMKAC | 2 cut(s) | 1568, 2273 |
| Fnu4HI | GCNGC | 2 cut(s) | 3036, 3057 |
| FokI | GGATG | 2 cut(s) | 1657, 2207 |
| FriOI | GRGCYC | 1 cut(s) | 1323 |
| Fsp4HI | GCNGC | 2 cut(s) | 3036, 3057 |
| GlaI | GCGC | 1 cut(s) | 1422 |
| GluI | GCNGC | 2 cut(s) | 3036, 3057 |
| GsaI | CCCAGC | 1 cut(s) | 2962 |
| GsuI | CTGGAG | 2 cut(s) | 960, 2004 |
| HaeII | RGCGCY | 1 cut(s) | 1424 |
| HaeIII | GGCC | 2 cut(s) | 1721, 2666 |
| HapII | CCGG | 4 cut(s) | 92, 176, 1359, 2321 |
| HgaI | GACGC | 2 cut(s) | 696, 1942 |
| HhaI | GCGC | 1 cut(s) | 1423 |
| Hin1I | GRCGYC | 1 cut(s) | 1953 |
| Hin6I | GCGC | 1 cut(s) | 1421 |
| HinP1I | GCGC | 1 cut(s) | 1421 |
| HincII | GTYRAC | 2 cut(s) | 1957, 2745 |
| HindII | GTYRAC | 2 cut(s) | 1957, 2745 |
| HindIII | AAGCTT | 2 cut(s) | 435, 719 |
| HpaII | CCGG | 4 cut(s) | 92, 176, 1359, 2321 |
| HphI | GGTGA | 9 cut(s) | 165, 1023, 1524, 1589, 2541, 2636, 2721, 2928, 2947 |
| Hpy166II | GTNNAC | 5 cut(s) | 1532, 1569, 1957, 2274, 2745 |
| Hpy8I | GTNNAC | 5 cut(s) | 1532, 1569, 1957, 2274, 2745 |
| Hpy99I | CGWCG | 2 cut(s) | 810, 2152 |
| HpyAV | CCTTC | 6 cut(s) | 153, 472, 779, 876, 1836, 1868 |
| HpyCH4III | ACNGT | 9 cut(s) | 551, 781, 835, 1478, 1546, 1765, 2472, 2907, 3004 |
| HpyCH4IV | ACGT | 6 cut(s) | 525, 774, 805, 1096, 1636, 2147 |
| HpyCH4V | TGCA | 8 cut(s) | 185, 546, 1507, 2065, 2527, 2707, 3151, 3217 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 2684, 2968, 3041 |
| HpySE526I | ACGT | 6 cut(s) | 525, 774, 805, 1096, 1636, 2147 |
| Hsp92I | GRCGYC | 1 cut(s) | 1953 |
| HspAI | GCGC | 1 cut(s) | 1421 |
| Ksp22I | TGATCA | 5 cut(s) | 952, 1123, 2125, 2569, 2749 |
| KspI | CCGCGG | 1 cut(s) | 3036 |
| LguI | GCTCTTC | 1 cut(s) | 670 |
| LmnI | GCTCC | 2 cut(s) | 868, 1318 |
| Lsp1109I | GCAGC | 1 cut(s) | 3043 |
| LweI | GCATC | 4 cut(s) | 78, 266, 2185, 2456 |
| MaeII | ACGT | 6 cut(s) | 525, 774, 805, 1096, 1636, 2147 |
| MaeIII | GTNAC | 4 cut(s) | 775, 876, 2547, 2697 |
| MflI | RGATCY | 3 cut(s) | 2093, 2577, 3228 |
| MhlI | GDGCHC | 2 cut(s) | 193, 1323 |
| MlyI | GAGTC | 9 cut(s) | 434, 665, 1204, 1298, 2422, 2570, 2750, 2893, 3264 |
| MmeI | TCCRAC | 2 cut(s) | 2130, 3085 |
| MroXI | GAANNNNTTC | 4 cut(s) | 814, 1041, 1486, 3081 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1656, 1893, 2893 |
| MspA1I | CMGCKG | 1 cut(s) | 3035 |
| MspI | CCGG | 4 cut(s) | 92, 176, 1359, 2321 |
| MspR9I | CCNGG | 4 cut(s) | 92, 855, 1359, 2322 |
| MssI | GTTTAAAC | 1 cut(s) | 1308 |
| Mva1269I | GAATGC | 1 cut(s) | 2157 |
| MvaI | CCWGG | 1 cut(s) | 855 |
| MvnI | CGCG | 2 cut(s) | 1623, 3035 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 2684, 2968, 3041 |
| NciI | CCSGG | 3 cut(s) | 92, 1359, 2322 |
| NcoI | CCATGG | 2 cut(s) | 1344, 2028 |
| NmuCI | GTSAC | 1 cut(s) | 2547 |
| NspI | RCATGY | 3 cut(s) | 189, 1043, 1447 |
| NspV | TTCGAA | 1 cut(s) | 420 |
| PagI | TCATGA | 2 cut(s) | 78, 1000 |
| PceI | AGGCCT | 1 cut(s) | 2666 |
| PciI | ACATGT | 2 cut(s) | 1039, 1443 |
| PciSI | GCTCTTC | 1 cut(s) | 670 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 313 |
| PctI | GAATGC | 1 cut(s) | 2157 |
| PdmI | GAANNNNTTC | 4 cut(s) | 814, 1041, 1486, 3081 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1151, 1345 |
| PfoI | TCCNGGA | 1 cut(s) | 2320 |
| PinAI | ACCGGT | 1 cut(s) | 175 |
| PkrI | GCNGC | 2 cut(s) | 3037, 3058 |
| Ple19I | CGATCG | 1 cut(s) | 1947 |
| PleI | GAGTC | 9 cut(s) | 433, 664, 1203, 1297, 2422, 2569, 2749, 2893, 3263 |
| PmeI | GTTTAAAC | 1 cut(s) | 1308 |
| PpsI | GAGTC | 9 cut(s) | 433, 664, 1203, 1297, 2422, 2569, 2749, 2893, 3263 |
| Ppu21I | YACGTR | 1 cut(s) | 1637 |
| PscI | ACATGT | 2 cut(s) | 1039, 1443 |
| PshAI | GACNNNNGTC | 1 cut(s) | 655 |
| PsiI | TTATAA | 1 cut(s) | 1760 |
| Psp124BI | GAGCTC | 1 cut(s) | 1323 |
| Psp1406I | AACGTT | 2 cut(s) | 525, 1096 |
| Psp6I | CCWGG | 1 cut(s) | 853 |
| PspFI | CCCAGC | 1 cut(s) | 2958 |
| PspGI | CCWGG | 1 cut(s) | 853 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1067 |
| PsuI | RGATCY | 3 cut(s) | 2093, 2577, 3228 |
| PvuI | CGATCG | 1 cut(s) | 1947 |
| RsaI | GTAC | 4 cut(s) | 409, 829, 1708, 2241 |
| RsaNI | GTAC | 4 cut(s) | 408, 828, 1707, 2240 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1656, 1893, 2893 |
| SacI | GAGCTC | 1 cut(s) | 1323 |
| SacII | CCGCGG | 1 cut(s) | 3036 |
| SapI | GCTCTTC | 1 cut(s) | 670 |
| SatI | GCNGC | 2 cut(s) | 3036, 3057 |
| ScaI | AGTACT | 1 cut(s) | 1708 |
| SchI | GAGTC | 9 cut(s) | 434, 665, 1204, 1298, 2422, 2570, 2750, 2893, 3264 |
| ScrFI | CCNGG | 4 cut(s) | 92, 855, 1359, 2322 |
| SduI | GDGCHC | 2 cut(s) | 193, 1323 |
| SfaNI | GCATC | 4 cut(s) | 78, 266, 2185, 2456 |
| SfcI | CTRYAG | 1 cut(s) | 2334 |
| Sfr303I | CCGCGG | 1 cut(s) | 3036 |
| SfuI | TTCGAA | 1 cut(s) | 420 |
| SgrBI | CCGCGG | 1 cut(s) | 3036 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1656, 1893, 2893 |
| SmlI | CTYRAG | 3 cut(s) | 229, 915, 3009 |
| SmoI | CTYRAG | 3 cut(s) | 229, 915, 3009 |
| SpeI | ACTAGT | 1 cut(s) | 2012 |
| SseBI | AGGCCT | 1 cut(s) | 2666 |
| SsiI | CCGC | 5 cut(s) | 1316, 1621, 3033, 3035, 3224 |
| SspI | AATATT | 1 cut(s) | 3160 |
| SstI | GAGCTC | 1 cut(s) | 1323 |
| StuI | AGGCCT | 1 cut(s) | 2666 |
| StyD4I | CCNGG | 4 cut(s) | 90, 853, 1357, 2320 |
| StyI | CCWWGG | 5 cut(s) | 400, 1344, 2028, 2815, 2926 |
| TaaI | ACNGT | 9 cut(s) | 551, 781, 835, 1478, 1546, 1765, 2472, 2907, 3004 |
| TaiI | ACGT | 6 cut(s) | 528, 777, 808, 1099, 1639, 2150 |
| TatI | WGTACW | 1 cut(s) | 1706 |
| TauI | GCSGC | 1 cut(s) | 3038 |
| TscAI | CASTG | 4 cut(s) | 1052, 1843, 2912, 3153 |
| TseFI | GTSAC | 1 cut(s) | 2547 |
| TseI | GCWGC | 1 cut(s) | 3056 |
| Tsp45I | GTSAC | 1 cut(s) | 2547 |
| TspRI | CASTG | 4 cut(s) | 1052, 1843, 2912, 3153 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1151, 1345 |
| XapI | RAATTY | 5 cut(s) | 42, 74, 1468, 2035, 2503 |
| XceI | RCATGY | 3 cut(s) | 189, 1043, 1447 |
| XmiI | GTMKAC | 2 cut(s) | 1568, 2273 |
| XmnI | GAANNNNTTC | 4 cut(s) | 814, 1041, 1486, 3081 |
| ZrmI | AGTACT | 1 cut(s) | 1708 |