BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07330 AT1G07330 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT2G29620 AT5G58880 |
| fragaria_vesca | FvH4_3g38180 |
| malus_domestica | MD03G1075800.v1.1 MD11G1080500.v1.1 |
| prunus_persica | Prupe.6G060900_v2.0.a1 |
| pyrus_communis | pycom03g06030 |
| rosa_chinensis | RchiOBHm_Chr5g0068611 |
| rosa_laevigata | RLG00000035984 |
| rosa_roxburghii | Rroxscaffold_1G00012270 |
| rosa_rugosa | Rorug05G0391800 Rorug05G0391900 |
| rosa_samantha | Rh5AG449500 Rh5BG467700 Rh5CG489500 Rh5DG481100 |
| rosa_wichuraiana | Rw5G041970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 408, 2097, 3797 |
| AarI | CACCTGC | 1 cut(s) | 4598 |
| Acc16I | TGCGCA | 1 cut(s) | 1668 |
| Acc36I | ACCTGC | 4 cut(s) | 835, 1671, 4537, 4598 |
| AccB1I | GGYRCC | 2 cut(s) | 392, 2810 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2365 |
| AccII | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| AccIII | TCCGGA | 1 cut(s) | 209 |
| AclI | AACGTT | 1 cut(s) | 3990 |
| AcsI | RAATTY | 7 cut(s) | 1070, 2446, 2512, 3165, 4083, 4161, 5146 |
| AcyI | GRCGYC | 1 cut(s) | 2888 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 302, 1051, 1357, 1759, 2365, 2600 |
| AflIII | ACRYGT | 3 cut(s) | 1299, 1468, 1860 |
| AhlI | ACTAGT | 3 cut(s) | 25, 65, 2924 |
| AjiI | CACGTC | 1 cut(s) | 1921 |
| AjnI | CCWGG | 5 cut(s) | 883, 964, 1549, 3629, 5200 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 4656, 4688, 4782, 4814, 4908, 4940 |
| Alw21I | GWGCWC | 3 cut(s) | 335, 1187, 2039 |
| Alw26I | GTCTC | 8 cut(s) | 1881, 2064, 2264, 2340, 2349, 3808, 4115, 4759 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 20, 2822, 3320, 3572, 5138 |
| Ama87I | CYCGRG | 1 cut(s) | 764 |
| Aor13HI | TCCGGA | 1 cut(s) | 209 |
| AoxI | GGCC | 6 cut(s) | 1800, 4258, 4652, 4778, 4904, 5030 |
| ApoI | RAATTY | 7 cut(s) | 1070, 2446, 2512, 3165, 4083, 4161, 5146 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2299, 2331 |
| AseI | ATTAAT | 1 cut(s) | 905 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 570, 3991, 4161, 4413, 4423, 5242 |
| AspLEI | GCGC | 3 cut(s) | 1669, 3236, 4741 |
| AspS9I | GGNCC | 5 cut(s) | 601, 1214, 1553, 1800, 4570 |
| AsuC2I | CCSGG | 2 cut(s) | 663, 4638 |
| AsuII | TTCGAA | 2 cut(s) | 434, 4417 |
| AvaI | CYCGRG | 1 cut(s) | 764 |
| AvaII | GGWCC | 4 cut(s) | 601, 1214, 1553, 4570 |
| BaeGI | GKGCMC | 2 cut(s) | 397, 2815 |
| BanI | GGYRCC | 2 cut(s) | 392, 2810 |
| BanII | GRGCYC | 1 cut(s) | 335 |
| BauI | CACGAG | 1 cut(s) | 1112 |
| BbsI | GAAGAC | 3 cut(s) | 145, 1524, 5181 |
| Bbv12I | GWGCWC | 3 cut(s) | 335, 1187, 2039 |
| BccI | CCATC | 5 cut(s) | 320, 1166, 1832, 5303, 5457 |
| BceAI | ACGGC | 4 cut(s) | 1092, 1627, 2377, 2681 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2190, 2224, 2453, 2487, 4995, 5029 |
| BciT130I | CCWGG | 5 cut(s) | 885, 966, 1551, 3631, 5202 |
| BciVI | GTATCC | 1 cut(s) | 865 |
| BclI | TGATCA | 2 cut(s) | 526, 742 |
| BcnI | CCSGG | 2 cut(s) | 663, 4638 |
| BcoDI | GTCTC | 8 cut(s) | 1881, 2064, 2264, 2340, 2349, 3808, 4115, 4759 |
| BcuI | ACTAGT | 3 cut(s) | 25, 65, 2924 |
| BfoI | RGCGCY | 1 cut(s) | 4742 |
| BfuAI | ACCTGC | 4 cut(s) | 835, 1671, 4537, 4598 |
| BfuI | GTATCC | 1 cut(s) | 865 |
| BglII | AGATCT | 1 cut(s) | 2674 |
| BlpI | GCTNAGC | 1 cut(s) | 2487 |
| Bme1390I | CCNGG | 7 cut(s) | 663, 885, 966, 1551, 3631, 4638, 5202 |
| Bme18I | GGWCC | 4 cut(s) | 601, 1214, 1553, 4570 |
| BmeT110I | CYCGRG | 1 cut(s) | 764 |
| BmgBI | CACGTC | 1 cut(s) | 1921 |
| BmgT120I | GGNCC | 5 cut(s) | 601, 1214, 1553, 1800, 4570 |
| BmrFI | CCNGG | 7 cut(s) | 663, 885, 966, 1551, 3631, 4638, 5202 |
| BmrI | ACTGGG | 4 cut(s) | 3237, 4551, 4568, 5268 |
| BmuI | ACTGGG | 4 cut(s) | 3237, 4551, 4568, 5268 |
| BpiI | GAAGAC | 3 cut(s) | 145, 1524, 5181 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1106, 1138, 1484, 1516 |
| BpmI | CTGGAG | 2 cut(s) | 1171, 2964 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2487 |
| Bpu14I | TTCGAA | 2 cut(s) | 434, 4417 |
| BpuEI | CTTGAG | 3 cut(s) | 2583, 2746, 3645 |
| BpuMI | CCSGG | 2 cut(s) | 663, 4638 |
| BsaAI | YACGTR | 1 cut(s) | 1471 |
| BsaHI | GRCGYC | 1 cut(s) | 2888 |
| BsaI | GGTCTC | 1 cut(s) | 2349 |
| BsaJI | CCNNGG | 6 cut(s) | 543, 1812, 1913, 2499, 2994, 3630 |
| BsaWI | WCCGGW | 3 cut(s) | 209, 3700, 4478 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2823, 2853 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 302, 1051, 1357, 1759, 2365, 2600 |
| Bse118I | RCCGGY | 6 cut(s) | 389, 1107, 3655, 3844, 4024, 4654 |
| Bse3DI | GCAATG | 4 cut(s) | 177, 2176, 2208, 2907 |
| BseAI | TCCGGA | 1 cut(s) | 209 |
| BseBI | CCWGG | 5 cut(s) | 885, 966, 1551, 3631, 5202 |
| BseDI | CCNNGG | 6 cut(s) | 543, 1812, 1913, 2499, 2994, 3630 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 302, 1051, 1357, 1759, 2365, 2600 |
| BseMI | GCAATG | 4 cut(s) | 177, 2176, 2208, 2907 |
| BseRI | GAGGAG | 3 cut(s) | 518, 708, 3203 |
| BseSI | GKGCMC | 2 cut(s) | 397, 2815 |
| BsgI | GTGCAG | 3 cut(s) | 746, 4683, 5226 |
| Bsh1236I | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| BshFI | GGCC | 6 cut(s) | 1802, 4260, 4654, 4780, 4906, 5032 |
| BshNI | GGYRCC | 2 cut(s) | 392, 2810 |
| BsiHKAI | GWGCWC | 3 cut(s) | 335, 1187, 2039 |
| BsiHKCI | CYCGRG | 1 cut(s) | 764 |
| BsiWI | CGTACG | 1 cut(s) | 1017 |
| BslFI | GGGAC | 4 cut(s) | 697, 1931, 2425, 4556 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 302, 1051, 1357, 1759, 2365, 2600 |
| BsmAI | GTCTC | 8 cut(s) | 1881, 2064, 2264, 2340, 2349, 3808, 4115, 4759 |
| BsmBI | CGTCTC | 4 cut(s) | 1881, 2064, 2264, 2340 |
| BsmFI | GGGAC | 4 cut(s) | 697, 1931, 2425, 4556 |
| BsnI | GGCC | 6 cut(s) | 1802, 4260, 4654, 4780, 4906, 5032 |
| Bso31I | GGTCTC | 1 cut(s) | 2349 |
| BsoBI | CYCGRG | 1 cut(s) | 764 |
| Bsp119I | TTCGAA | 2 cut(s) | 434, 4417 |
| Bsp1286I | GDGCHC | 5 cut(s) | 335, 397, 1187, 2039, 2815 |
| Bsp13I | TCCGGA | 1 cut(s) | 209 |
| Bsp1407I | TGTACA | 1 cut(s) | 79 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2487 |
| BspANI | GGCC | 6 cut(s) | 1802, 4260, 4654, 4780, 4906, 5032 |
| BspEI | TCCGGA | 1 cut(s) | 209 |
| BspFNI | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| BspMAI | CTGCAG | 9 cut(s) | 3136, 3328, 4012, 4075, 4327, 4516, 4828, 4954, 5416 |
| BspMI | ACCTGC | 4 cut(s) | 835, 1671, 4537, 4598 |
| BspQI | GCTCTTC | 1 cut(s) | 1616 |
| BspT104I | TTCGAA | 2 cut(s) | 434, 4417 |
| BspT107I | GGYRCC | 2 cut(s) | 392, 2810 |
| BspTNI | GGTCTC | 1 cut(s) | 2349 |
| BsrDI | GCAATG | 4 cut(s) | 177, 2176, 2208, 2907 |
| BsrFI | RCCGGY | 6 cut(s) | 389, 1107, 3655, 3844, 4024, 4654 |
| BsrGI | TGTACA | 1 cut(s) | 79 |
| BssAI | RCCGGY | 6 cut(s) | 389, 1107, 3655, 3844, 4024, 4654 |
| BssECI | CCNNGG | 6 cut(s) | 543, 1812, 1913, 2499, 2994, 3630 |
| BssNI | GRCGYC | 1 cut(s) | 2888 |
| BssSI | CACGAG | 1 cut(s) | 1112 |
| BssT1I | CCWWGG | 2 cut(s) | 1913, 2499 |
| Bst2BI | CACGAG | 1 cut(s) | 1112 |
| Bst2UI | CCWGG | 5 cut(s) | 885, 966, 1551, 3631, 5202 |
| Bst4CI | ACNGT | 5 cut(s) | 1319, 2351, 2860, 3456, 5497 |
| Bst6I | CTCTTC | 5 cut(s) | 211, 225, 1026, 1359, 1616 |
| BstACI | GRCGYC | 1 cut(s) | 2888 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2303, 3758 |
| BstAUI | TGTACA | 1 cut(s) | 79 |
| BstBAI | YACGTR | 1 cut(s) | 1471 |
| BstBI | TTCGAA | 2 cut(s) | 434, 4417 |
| BstDSI | CCRYGG | 2 cut(s) | 543, 1812 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 300 |
| BstFNI | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| BstH2I | RGCGCY | 1 cut(s) | 4742 |
| BstHHI | GCGC | 3 cut(s) | 1669, 3236, 4741 |
| BstMAI | GTCTC | 8 cut(s) | 1881, 2064, 2264, 2340, 2349, 3808, 4115, 4759 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 551, 1328, 2303, 2459, 3125, 3317, 3443, 3758, 4505 |
| BstNI | CCWGG | 5 cut(s) | 885, 966, 1551, 3631, 5202 |
| BstNSI | RCATGY | 2 cut(s) | 1303, 1864 |
| BstSCI | CCNGG | 7 cut(s) | 661, 883, 964, 1549, 3629, 4636, 5200 |
| BstSLI | GKGCMC | 2 cut(s) | 397, 2815 |
| BstUI | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| BstV2I | GAAGAC | 3 cut(s) | 145, 1524, 5181 |
| BstX2I | RGATCY | 3 cut(s) | 760, 2674, 5134 |
| BstYI | RGATCY | 3 cut(s) | 760, 2674, 5134 |
| BsuI | GTATCC | 1 cut(s) | 865 |
| BsuRI | GGCC | 6 cut(s) | 1802, 4260, 4654, 4780, 4906, 5032 |
| BtgI | CCRYGG | 2 cut(s) | 543, 1812 |
| BtrI | CACGTC | 1 cut(s) | 1921 |
| BtsI | GCAGTG | 1 cut(s) | 734 |
| BtsIMutI | CAGTG | 6 cut(s) | 734, 1166, 1377, 1787, 2865, 5493 |
| BveI | ACCTGC | 4 cut(s) | 835, 1671, 4537, 4598 |
| CaiI | CAGNNNCTG | 5 cut(s) | 20, 2822, 3320, 3572, 5138 |
| CfoI | GCGC | 3 cut(s) | 1669, 3236, 4741 |
| Cfr10I | RCCGGY | 6 cut(s) | 389, 1107, 3655, 3844, 4024, 4654 |
| Cfr13I | GGNCC | 5 cut(s) | 601, 1214, 1553, 1800, 4570 |
| Cfr42I | CCGCGG | 1 cut(s) | 546 |
| CseI | GACGC | 8 cut(s) | 1860, 2763, 2896, 3225, 3666, 4451, 4602, 4980 |
| CsiI | ACCWGGT | 2 cut(s) | 883, 964 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1353, 1388 |
| DraI | TTTAAA | 3 cut(s) | 1195, 5151, 5214 |
| Eam1104I | CTCTTC | 5 cut(s) | 211, 225, 1026, 1359, 1616 |
| EarI | CTCTTC | 5 cut(s) | 211, 225, 1026, 1359, 1616 |
| EciI | GGCGGA | 1 cut(s) | 1067 |
| Ecl136II | GAGCTC | 1 cut(s) | 333 |
| Eco130I | CCWWGG | 2 cut(s) | 1913, 2499 |
| Eco24I | GRGCYC | 1 cut(s) | 335 |
| Eco31I | GGTCTC | 1 cut(s) | 2349 |
| Eco47I | GGWCC | 4 cut(s) | 601, 1214, 1553, 4570 |
| Eco53kI | GAGCTC | 1 cut(s) | 333 |
| Eco88I | CYCGRG | 1 cut(s) | 764 |
| EcoICRI | GAGCTC | 1 cut(s) | 333 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 300 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1214, 4570 |
| EcoRI | GAATTC | 2 cut(s) | 1070, 2512 |
| EcoRII | CCWGG | 5 cut(s) | 883, 964, 1549, 3629, 5200 |
| EcoT14I | CCWWGG | 2 cut(s) | 1913, 2499 |
| EcoT22I | ATGCAT | 1 cut(s) | 5119 |
| EcoT38I | GRGCYC | 1 cut(s) | 335 |
| ErhI | CCWWGG | 2 cut(s) | 1913, 2499 |
| Esp3I | CGTCTC | 4 cut(s) | 1881, 2064, 2264, 2340 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1489, 1521, 1702, 1734 |
| FaqI | GGGAC | 4 cut(s) | 697, 1931, 2425, 4556 |
| FauI | CCCGC | 1 cut(s) | 2214 |
| FbaI | TGATCA | 2 cut(s) | 526, 742 |
| FriOI | GRGCYC | 1 cut(s) | 335 |
| FspI | TGCGCA | 1 cut(s) | 1668 |
| GlaI | GCGC | 3 cut(s) | 1668, 3235, 4740 |
| GsuI | CTGGAG | 2 cut(s) | 1171, 2964 |
| HaeII | RGCGCY | 1 cut(s) | 4742 |
| HaeIII | GGCC | 6 cut(s) | 1802, 4260, 4654, 4780, 4906, 5032 |
| HgaI | GACGC | 8 cut(s) | 1860, 2763, 2896, 3225, 3666, 4451, 4602, 4980 |
| HhaI | GCGC | 3 cut(s) | 1669, 3236, 4741 |
| Hin1I | GRCGYC | 1 cut(s) | 2888 |
| Hin6I | GCGC | 3 cut(s) | 1667, 3234, 4739 |
| HinP1I | GCGC | 3 cut(s) | 1667, 3234, 4739 |
| HincII | GTYRAC | 3 cut(s) | 319, 2886, 5358 |
| HindII | GTYRAC | 3 cut(s) | 319, 2886, 5358 |
| Hpy99I | CGWCG | 4 cut(s) | 683, 929, 1493, 1876 |
| HpyCH4III | ACNGT | 5 cut(s) | 1319, 2351, 2860, 3456, 5497 |
| HpyCH4IV | ACGT | 7 cut(s) | 1470, 1920, 2467, 2632, 2838, 3927, 3990 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 551, 1328, 2303, 2459, 3125, 3317, 3443, 3758, 4505 |
| HpySE526I | ACGT | 7 cut(s) | 1470, 1920, 2467, 2632, 2838, 3927, 3990 |
| Hsp92I | GRCGYC | 1 cut(s) | 2888 |
| HspAI | GCGC | 3 cut(s) | 1667, 3234, 4739 |
| Kpn2I | TCCGGA | 1 cut(s) | 209 |
| KroI | GCCGGC | 2 cut(s) | 1107, 4654 |
| KroNI | GCCGGC | 2 cut(s) | 1109, 4656 |
| Ksp22I | TGATCA | 2 cut(s) | 526, 742 |
| KspI | CCGCGG | 1 cut(s) | 546 |
| LguI | GCTCTTC | 1 cut(s) | 1616 |
| MabI | ACCWGGT | 2 cut(s) | 883, 964 |
| MaeII | ACGT | 7 cut(s) | 1470, 1920, 2467, 2632, 2838, 3927, 3990 |
| MfeI | CAATTG | 3 cut(s) | 4215, 5067, 5334 |
| MflI | RGATCY | 3 cut(s) | 760, 2674, 5134 |
| MhlI | GDGCHC | 5 cut(s) | 335, 397, 1187, 2039, 2815 |
| MlyI | GAGTC | 8 cut(s) | 210, 641, 1502, 1923, 4337, 4703, 4955, 5081 |
| MmeI | TCCRAC | 9 cut(s) | 280, 636, 651, 1087, 1329, 1665, 2122, 2759, 3712 |
| Mph1103I | ATGCAT | 1 cut(s) | 5119 |
| MroI | TCCGGA | 1 cut(s) | 209 |
| MroNI | GCCGGC | 2 cut(s) | 1107, 4654 |
| MroXI | GAANNNNTTC | 6 cut(s) | 570, 3991, 4161, 4413, 4423, 5242 |
| MspA1I | CMGCKG | 6 cut(s) | 545, 2221, 3152, 3344, 4784, 5036 |
| MspR9I | CCNGG | 7 cut(s) | 663, 885, 966, 1551, 3631, 4638, 5202 |
| MunI | CAATTG | 3 cut(s) | 4215, 5067, 5334 |
| MvaI | CCWGG | 5 cut(s) | 885, 966, 1551, 3631, 5202 |
| MvnI | CGCG | 4 cut(s) | 545, 1293, 3236, 5487 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 551, 1328, 2303, 2459, 3125, 3317, 3443, 3758, 4505 |
| NaeI | GCCGGC | 2 cut(s) | 1109, 4656 |
| NciI | CCSGG | 2 cut(s) | 663, 4638 |
| NgoMIV | GCCGGC | 2 cut(s) | 1107, 4654 |
| NmuCI | GTSAC | 8 cut(s) | 1828, 2927, 3171, 3237, 3300, 3678, 4614, 4992 |
| NsbI | TGCGCA | 1 cut(s) | 1668 |
| NsiI | ATGCAT | 1 cut(s) | 5119 |
| NspI | RCATGY | 2 cut(s) | 1303, 1864 |
| NspV | TTCGAA | 2 cut(s) | 434, 4417 |
| PaqCI | CACCTGC | 1 cut(s) | 4598 |
| PciI | ACATGT | 2 cut(s) | 1299, 1860 |
| PciSI | GCTCTTC | 1 cut(s) | 1616 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1266, 2732 |
| PdiI | GCCGGC | 2 cut(s) | 1109, 4656 |
| PdmI | GAANNNNTTC | 6 cut(s) | 570, 3991, 4161, 4413, 4423, 5242 |
| Pfl23II | CGTACG | 1 cut(s) | 1017 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2365 |
| PfoI | TCCNGGA | 1 cut(s) | 4636 |
| PleI | GAGTC | 8 cut(s) | 210, 641, 1501, 1923, 4336, 4702, 4954, 5080 |
| PpsI | GAGTC | 8 cut(s) | 210, 641, 1501, 1923, 4336, 4702, 4954, 5080 |
| Ppu21I | YACGTR | 1 cut(s) | 1471 |
| PpuMI | RGGWCCY | 2 cut(s) | 1214, 4570 |
| PscI | ACATGT | 2 cut(s) | 1299, 1860 |
| PshBI | ATTAAT | 1 cut(s) | 905 |
| PsiI | TTATAA | 3 cut(s) | 408, 2097, 3797 |
| Psp124BI | GAGCTC | 1 cut(s) | 335 |
| Psp1406I | AACGTT | 1 cut(s) | 3990 |
| Psp5II | RGGWCCY | 2 cut(s) | 1214, 4570 |
| Psp6I | CCWGG | 5 cut(s) | 883, 964, 1549, 3629, 5200 |
| PspGI | CCWGG | 5 cut(s) | 883, 964, 1549, 3629, 5200 |
| PspLI | CGTACG | 1 cut(s) | 1017 |
| PspPI | GGNCC | 5 cut(s) | 601, 1214, 1553, 1800, 4570 |
| PspPPI | RGGWCCY | 2 cut(s) | 1214, 4570 |
| PstI | CTGCAG | 9 cut(s) | 3136, 3328, 4012, 4075, 4327, 4516, 4828, 4954, 5416 |
| PstNI | CAGNNNCTG | 5 cut(s) | 20, 2822, 3320, 3572, 5138 |
| PsuI | RGATCY | 3 cut(s) | 760, 2674, 5134 |
| PvuII | CAGCTG | 4 cut(s) | 3152, 3344, 4784, 5036 |
| SacI | GAGCTC | 1 cut(s) | 335 |
| SacII | CCGCGG | 1 cut(s) | 546 |
| SapI | GCTCTTC | 1 cut(s) | 1616 |
| Sau96I | GGNCC | 5 cut(s) | 601, 1214, 1553, 1800, 4570 |
| SchI | GAGTC | 8 cut(s) | 210, 641, 1502, 1923, 4337, 4703, 4955, 5081 |
| ScrFI | CCNGG | 7 cut(s) | 663, 885, 966, 1551, 3631, 4638, 5202 |
| SduI | GDGCHC | 5 cut(s) | 335, 397, 1187, 2039, 2815 |
| SexAI | ACCWGGT | 2 cut(s) | 883, 964 |
| Sfr303I | CCGCGG | 1 cut(s) | 546 |
| SfuI | TTCGAA | 2 cut(s) | 434, 4417 |
| SgrBI | CCGCGG | 1 cut(s) | 546 |
| SinI | GGWCC | 4 cut(s) | 601, 1214, 1553, 4570 |
| SmlI | CTYRAG | 3 cut(s) | 2598, 2761, 3660 |
| SmoI | CTYRAG | 3 cut(s) | 2598, 2761, 3660 |
| SpeI | ACTAGT | 3 cut(s) | 25, 65, 2924 |
| SstI | GAGCTC | 1 cut(s) | 335 |
| StyD4I | CCNGG | 7 cut(s) | 661, 883, 964, 1549, 3629, 4636, 5200 |
| StyI | CCWWGG | 2 cut(s) | 1913, 2499 |
| TaaI | ACNGT | 5 cut(s) | 1319, 2351, 2860, 3456, 5497 |
| TaiI | ACGT | 7 cut(s) | 1473, 1923, 2470, 2635, 2841, 3930, 3993 |
| TaqII | GACCGA | 2 cut(s) | 589, 2946 |
| TatI | WGTACW | 6 cut(s) | 22, 79, 1541, 1857, 2173, 4385 |
| TauI | GCSGC | 1 cut(s) | 548 |
| TscAI | CASTG | 6 cut(s) | 734, 1173, 1377, 1794, 2865, 5500 |
| TseFI | GTSAC | 8 cut(s) | 1828, 2927, 3171, 3237, 3300, 3678, 4614, 4992 |
| Tsp45I | GTSAC | 8 cut(s) | 1828, 2927, 3171, 3237, 3300, 3678, 4614, 4992 |
| TspGWI | ACGGA | 7 cut(s) | 81, 153, 268, 1005, 1829, 3200, 5384 |
| TspRI | CASTG | 6 cut(s) | 734, 1173, 1377, 1794, 2865, 5500 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2365 |
| VpaK11BI | GGWCC | 4 cut(s) | 601, 1214, 1553, 4570 |
| VspI | ATTAAT | 1 cut(s) | 905 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 300 |
| XapI | RAATTY | 7 cut(s) | 1070, 2446, 2512, 3165, 4083, 4161, 5146 |
| XbaI | TCTAGA | 1 cut(s) | 4195 |
| XceI | RCATGY | 2 cut(s) | 1303, 1864 |
| XmnI | GAANNNNTTC | 6 cut(s) | 570, 3991, 4161, 4413, 4423, 5242 |
| Zsp2I | ATGCAT | 1 cut(s) | 5119 |