AT5G61760

Inositol phosphate kinase with a broad substrate specificity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0009410
Physical Location & Seq
Reverse (-)
24813660 .. 24815458
1799 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61760.2

Sequence Viewer

Length: 903 bp
ATGCTCAAGGTCCCTGAACACCAAGTTGCTGGTCACATTGCTAGTGATGGGAAGCTCGGTCCACTCGTAGATGACCAAGGCCGGTTCTTCAAGCCACTTCAGGGAGATTCTCGTGGCGAACACGAGGCTAAGTTCTATGAGTCTTTCACATCGAACATGAAGGTTCCAGATCACATCCATAGATACTTCCCGGTGTATCACGGCACTCAGCTAGTTGAAGCATCTGATGGATCTGGCAAGCTTCCTCATCTTGTTCTTGATGATGTTGTTTCAGGGTACGCAAACCCGTCGGTAATGGATGTTAAGATTGGATCTAGGACATGGTACCCGGATGTATCAGAAGAATACTTCAAGAAATGTATTAAGAAAGATAGACAGACCACCACGGTTTCGTTGGGGTTCAGGGTTTCAGGTTTTAAGATTTTTGATCACCAAGAATCAAGTTTTTGGAGAGCTGAGAAGAAGCTTGTTCTTGGGTATAATGCAGATGGTGCTAGATTGGCTCTGAGGAAGTTTGTGTCATCGAACTCTCCCGCTGACTCTAACTTGACACCAAACTGTGCTTTTGCATCAGAGGTTTATGGCGGTTGTAACGGGATCTTAGCGCAGTTGTTGGAGCTTAAAGATTGGTTCGAAACCCAAACGCTTTACCATTTCAATTCCTGCTCGATTCTGATGATTTACGAGAATGAATCAATCTTGATGCAAGGAGGAGATGATGCACCGGCACCACGGGCACAAGTGAAGCTGGTGGATTTCGCGCATGTTCTTGATGGAAACGGTGTCATCGACCATAATTTCTTGGGTGGACTCTGCTCTTTCATAAAGTTCATCAAAGATATTCTTCAGAGCGTTGAAAAGCACGATGAAACCGATACTTCCCTACTTGAGAACGGGCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000823 GO:0000824 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006066 GO:0006355 GO:0006793 GO:0006796 GO:0006935 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009889 GO:0009932 GO:0009987 GO:0010154 GO:0010183 GO:0010264 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0019219 GO:0019222 GO:0019637 GO:0019751 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032958 GO:0032989 GO:0033517 GO:0040007 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046165 GO:0046173 GO:0048229 GO:0048316 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051171 GO:0051252 GO:0051704 GO:0051765 GO:0051766 GO:0052725 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090406 GO:0090407 GO:0120025 GO:1901576 GO:1901615 GO:1901617 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00562 ko01100 ko04070 ko04138 ko04217 ko05034 ko05322 map00562 map01100 map04070 map04138 map04217 map05034 map05322
Pfam Domains
Protein Families
IPK

Protein Analysis

300

Amino Acids

33.49

Weight (kDa)

5.72

Isoelectric Point (pI)

25.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IPK PF03770 83 - 279 4.7e-47 Inositol polyphosphate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 324
AccB1I GGYRCC 2 cut(s) 324, 727
AccII CGCG 1 cut(s) 761
AciI CCGC 2 cut(s) 534, 585
AclWI GGATC 3 cut(s) 238, 319, 605
AcuI CTGAAG 2 cut(s) 83, 830
AfaI GTAC 2 cut(s) 278, 326
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 5 cut(s) 91, 218, 352, 658, 857
AluBI AGCT 7 cut(s) 55, 211, 241, 455, 466, 619, 748
AluI AGCT 7 cut(s) 55, 211, 241, 455, 466, 619, 748
AlwI GGATC 3 cut(s) 238, 319, 605
AoxI GGCC 1 cut(s) 79
Asp718I GGTACC 1 cut(s) 324
AspLEI GCGC 3 cut(s) 607, 763, 900
AspS9I GGNCC 2 cut(s) 10, 59
AsuC2I CCSGG 2 cut(s) 191, 329
AsuHPI GGTGA 1 cut(s) 422
AsuII TTCGAA 1 cut(s) 633
AvaII GGWCC 2 cut(s) 10, 59
BaeGI GKGCMC 1 cut(s) 739
BanI GGYRCC 2 cut(s) 324, 727
BauI CACGAG 2 cut(s) 111, 122
BccI CCATC 4 cut(s) 41, 221, 482, 767
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 2 cut(s) 270, 304
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 2 cut(s) 191, 329
BfaI CTAG 5 cut(s) 42, 212, 315, 495, 901
BfoI RGCGCY 1 cut(s) 901
Bme1390I CCNGG 2 cut(s) 191, 329
Bme18I GGWCC 2 cut(s) 10, 59
BmgT120I GGNCC 2 cut(s) 10, 59
BmiI GGNNCC 4 cut(s) 12, 165, 326, 729
BmrFI CCNGG 2 cut(s) 191, 329
BmsI GCATC 4 cut(s) 230, 578, 693, 709
Bpu14I TTCGAA 1 cut(s) 633
BpuMI CCSGG 2 cut(s) 191, 329
BsaJI CCNNGG 3 cut(s) 76, 384, 731
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse118I RCCGGY 2 cut(s) 81, 724
Bse3DI GCAATG 1 cut(s) 36
BseDI CCNNGG 3 cut(s) 76, 384, 731
BseGI GGATG 3 cut(s) 174, 304, 337
BseLI CCNNNNNNNGG 1 cut(s) 101
BseMI GCAATG 1 cut(s) 36
BseMII CTCAG 3 cut(s) 221, 447, 497
BseRI GAGGAG 1 cut(s) 726
BseSI GKGCMC 1 cut(s) 739
Bsh1236I CGCG 1 cut(s) 761
BshFI GGCC 1 cut(s) 81
BshNI GGYRCC 2 cut(s) 324, 727
BsiSI CCGG 4 cut(s) 82, 191, 329, 725
BslI CCNNNNNNNGG 1 cut(s) 101
BsnI GGCC 1 cut(s) 81
Bsp119I TTCGAA 1 cut(s) 633
Bsp1286I GDGCHC 1 cut(s) 739
Bsp143I GATC 5 cut(s) 169, 230, 311, 427, 597
BspACI CCGC 2 cut(s) 534, 585
BspANI GGCC 1 cut(s) 81
BspCNI CTCAG 3 cut(s) 220, 448, 498
BspFNI CGCG 1 cut(s) 761
BspLI GGNNCC 4 cut(s) 12, 165, 326, 729
BspPI GGATC 3 cut(s) 238, 319, 605
BspT104I TTCGAA 1 cut(s) 633
BspT107I GGYRCC 2 cut(s) 324, 727
BsrDI GCAATG 1 cut(s) 36
BsrFI RCCGGY 2 cut(s) 81, 724
BssAI RCCGGY 2 cut(s) 81, 724
BssECI CCNNGG 3 cut(s) 76, 384, 731
BssMI GATC 5 cut(s) 169, 230, 311, 427, 597
BssSI CACGAG 2 cut(s) 111, 122
BssT1I CCWWGG 1 cut(s) 76
Bst2BI CACGAG 2 cut(s) 111, 122
Bst4CI ACNGT 3 cut(s) 388, 560, 782
BstAPI GCANNNNNTGC 1 cut(s) 491
BstBI TTCGAA 1 cut(s) 633
BstC8I GCNNGC 1 cut(s) 239
BstDEI CTNAG 5 cut(s) 129, 207, 456, 506, 601
BstDSI CCRYGG 2 cut(s) 384, 731
BstF5I GGATG 3 cut(s) 174, 304, 337
BstFNI CGCG 1 cut(s) 761
BstH2I RGCGCY 1 cut(s) 901
BstHHI GCGC 3 cut(s) 607, 763, 900
BstKTI GATC 5 cut(s) 172, 233, 314, 430, 600
BstMBI GATC 5 cut(s) 169, 230, 311, 427, 597
BstMWI GCNNNNNNNGC 3 cut(s) 491, 500, 734
BstNSI RCATGY 1 cut(s) 767
BstSCI CCNGG 2 cut(s) 189, 327
BstSLI GKGCMC 1 cut(s) 739
BstUI CGCG 1 cut(s) 761
BstX2I RGATCY 3 cut(s) 230, 311, 597
BstXI CCANNNNNNTGG 1 cut(s) 29
BstYI RGATCY 3 cut(s) 230, 311, 597
BsuRI GGCC 1 cut(s) 81
BtgI CCRYGG 2 cut(s) 384, 731
BtsCI GGATG 3 cut(s) 174, 304, 337
Cac8I GCNNGC 1 cut(s) 239
CfoI GCGC 3 cut(s) 607, 763, 900
Cfr10I RCCGGY 2 cut(s) 81, 724
Cfr13I GGNCC 2 cut(s) 10, 59
Csp6I GTAC 2 cut(s) 277, 325
CviAII CATG 3 cut(s) 157, 321, 764
CviQI GTAC 2 cut(s) 277, 325
DdeI CTNAG 5 cut(s) 129, 207, 456, 506, 601
DpnI GATC 5 cut(s) 171, 232, 313, 429, 599
DpnII GATC 5 cut(s) 169, 230, 311, 427, 597
Eco130I CCWWGG 1 cut(s) 76
Eco47I GGWCC 2 cut(s) 10, 59
Eco57I CTGAAG 2 cut(s) 83, 830
EcoO109I RGGNCCY 1 cut(s) 10
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 3 cut(s) 160, 324, 767
FaiI YATR 9 cut(s) 138, 158, 180, 322, 480, 582, 765, 795, 824
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FatI CATG 3 cut(s) 156, 320, 763
FauI CCCGC 1 cut(s) 541
FbaI TGATCA 1 cut(s) 427
FokI GGATG 3 cut(s) 161, 311, 344
FspBI CTAG 5 cut(s) 42, 212, 315, 495, 901
GlaI GCGC 3 cut(s) 606, 762, 899
HaeII RGCGCY 1 cut(s) 901
HaeIII GGCC 1 cut(s) 81
HapII CCGG 4 cut(s) 82, 191, 329, 725
HhaI GCGC 3 cut(s) 607, 763, 900
Hin1II CATG 3 cut(s) 160, 324, 767
Hin6I GCGC 3 cut(s) 605, 761, 898
HinP1I GCGC 3 cut(s) 605, 761, 898
HindIII AAGCTT 2 cut(s) 239, 464
HinfI GANTC 7 cut(s) 107, 140, 437, 539, 670, 692, 810
HpaII CCGG 4 cut(s) 82, 191, 329, 725
HphI GGTGA 1 cut(s) 422
Hpy166II GTNNAC 2 cut(s) 62, 809
Hpy188I TCNGA 6 cut(s) 226, 340, 507, 574, 675, 849
Hpy188III TCNNGA 5 cut(s) 167, 257, 352, 700, 770
Hpy8I GTNNAC 2 cut(s) 62, 809
Hpy99I CGWCG 1 cut(s) 292
HpyAV CCTTC 1 cut(s) 154
HpyCH4III ACNGT 3 cut(s) 388, 560, 782
HpyCH4V TGCA 4 cut(s) 485, 569, 706, 722
HpyF10VI GCNNNNNNNGC 3 cut(s) 491, 500, 734
HpyF3I CTNAG 5 cut(s) 129, 207, 456, 506, 601
Hsp92II CATG 3 cut(s) 160, 324, 767
HspAI GCGC 3 cut(s) 605, 761, 898
KpnI GGTACC 1 cut(s) 328
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 5 cut(s) 169, 230, 311, 427, 597
LmnI GCTCC 1 cut(s) 616
LweI GCATC 4 cut(s) 230, 578, 693, 709
MaeI CTAG 5 cut(s) 42, 212, 315, 495, 901
MaeIII GTNAC 2 cut(s) 32, 590
MalI GATC 5 cut(s) 171, 232, 313, 429, 599
MboI GATC 5 cut(s) 169, 230, 311, 427, 597
MboII GAAGA 4 cut(s) 79, 353, 472, 836
MflI RGATCY 3 cut(s) 230, 311, 597
MhlI GDGCHC 1 cut(s) 739
MluCI AATT 2 cut(s) 658, 796
MlyI GAGTC 3 cut(s) 149, 533, 804
MmeI TCCRAC 1 cut(s) 594
MnlI CCTC 5 cut(s) 118, 255, 501, 568, 704
MseI TTAA 4 cut(s) 303, 363, 417, 621
MspA1I CMGCKG 1 cut(s) 536
MspI CCGG 4 cut(s) 82, 191, 329, 725
MspR9I CCNGG 2 cut(s) 191, 329
MvnI CGCG 1 cut(s) 761
MwoI GCNNNNNNNGC 3 cut(s) 491, 500, 734
NciI CCSGG 2 cut(s) 191, 329
NdeII GATC 5 cut(s) 169, 230, 311, 427, 597
NlaIII CATG 3 cut(s) 160, 324, 767
NlaIV GGNNCC 4 cut(s) 12, 165, 326, 729
NmuCI GTSAC 1 cut(s) 32
NspI RCATGY 1 cut(s) 767
NspV TTCGAA 1 cut(s) 633
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 786, 870
PfeI GAWTC 4 cut(s) 107, 437, 670, 692
PleI GAGTC 3 cut(s) 148, 533, 804
PpsI GAGTC 3 cut(s) 148, 533, 804
PpuMI RGGWCCY 1 cut(s) 10
Psp5II RGGWCCY 1 cut(s) 10
PspN4I GGNNCC 4 cut(s) 12, 165, 326, 729
PspPI GGNCC 2 cut(s) 10, 59
PspPPI RGGWCCY 1 cut(s) 10
PsuI RGATCY 3 cut(s) 230, 311, 597
RsaI GTAC 2 cut(s) 278, 326
RsaNI GTAC 2 cut(s) 277, 325
SaqAI TTAA 4 cut(s) 303, 363, 417, 621
Sau3AI GATC 5 cut(s) 169, 230, 311, 427, 597
Sau96I GGNCC 2 cut(s) 10, 59
SchI GAGTC 3 cut(s) 149, 533, 804
ScrFI CCNGG 2 cut(s) 191, 329
SduI GDGCHC 1 cut(s) 739
SfaNI GCATC 4 cut(s) 230, 578, 693, 709
SfuI TTCGAA 1 cut(s) 633
SinI GGWCC 2 cut(s) 10, 59
SmlI CTYRAG 2 cut(s) 5, 887
SmoI CTYRAG 2 cut(s) 5, 887
Sse9I AATT 2 cut(s) 658, 796
SsiI CCGC 2 cut(s) 534, 585
SspMI CTAG 5 cut(s) 42, 212, 315, 495, 901
StyD4I CCNGG 2 cut(s) 189, 327
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 3 cut(s) 388, 560, 782
TaqI TCGA 5 cut(s) 152, 524, 633, 668, 789
TaqII GACCGA 1 cut(s) 47
TasI AATT 2 cut(s) 658, 796
TfiI GAWTC 4 cut(s) 107, 437, 670, 692
Tru1I TTAA 4 cut(s) 303, 363, 417, 621
Tru9I TTAA 4 cut(s) 303, 363, 417, 621
TseFI GTSAC 1 cut(s) 32
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 5 cut(s) 173, 705, 811, 820, 882
VpaK11BI GGWCC 2 cut(s) 10, 59
XceI RCATGY 1 cut(s) 767
XcmI CCANNNNNNNNNTGG 1 cut(s) 391
XspI CTAG 5 cut(s) 42, 212, 315, 495, 901
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.