MD06G1128700.v1.1

Inositol polyphosphate multikinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0009410
Physical Location & Seq
Reverse (-)
27100945 .. 27103295
2351 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1128700.v1.1.491

Sequence Viewer

Length: 627 bp
ATGGTTCTGGCCTGTCTCCTCACCTGGCCTTGGAAGATATTGTCTCAAGCCGAATCAATCCATGTATATTGGACGCTAAAATTGGTGCCAGAACATGGTACCCCACAAGCTGCTGAAGATTATCTCCAAAGGTGTCTTAAGAAAGATAGAGAAACCGCGAGCCTGGAACTGGGGTTCAGGATATCTGGACTCCAAGTGCATGGAAACAAAGAAACTGGAGTTTGGAAGCCAGACAGGACGGTTATTCAGAGGGGTAGCGTTGATGAGACTAAGTTAACTCTTAGGAAATTTGTATCTTCTAACCCATCTACCGATTCAGATATATCAAACCAGATTGTTGTTTTTGCATCGACTGTCTATGGTGGTCATAATGGGATATTGGCACAGTTGCTGGTACTGAAGTCGTGGTTTGAGGAGCAGACCATTTACCATTTCTACTCTTGTTCAGTTATGATGGTTTACGACAAGGAATCGTTGCAGCAAGGGAAGAAACAAGGTGCTCAAATTAAACTTGTTGATTTTGCTCATGTGATCGACGGGAAAGGTGTAATCGACCATAACTTCTTGGGCGGGCTCTGCTCCTTGATAAGGATGATCTCAGAAATTGTCACCGATCCTAGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000823 GO:0000824 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006066 GO:0006355 GO:0006793 GO:0006796 GO:0006935 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009555 GO:0009605 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009889 GO:0009932 GO:0009987 GO:0010154 GO:0010183 GO:0010264 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0019219 GO:0019222 GO:0019637 GO:0019751 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032958 GO:0032989 GO:0033517 GO:0040007 GO:0040011 GO:0042221 GO:0042330 GO:0042995 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0046165 GO:0046173 GO:0048229 GO:0048316 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0050918 GO:0051171 GO:0051252 GO:0051704 GO:0051765 GO:0051766 GO:0052725 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090406 GO:0090407 GO:0120025 GO:1901576 GO:1901615 GO:1901617 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00562 ko01100 ko04070 ko04138 ko04217 ko05034 ko05322 map00562 map01100 map04070 map04138 map04217 map05034 map05322
Pfam Domains
Protein Families
IPK

Protein Analysis

209

Amino Acids

23.36

Weight (kDa)

6.65

Isoelectric Point (pI)

27.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IPK PF03770 35 - 199 3.4e-32 Inositol polyphosphate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 98
AccB1I GGYRCC 2 cut(s) 85, 98
AccB7I CCANNNNNTGG 1 cut(s) 95
AccII CGCG 1 cut(s) 158
AciI CCGC 2 cut(s) 156, 570
AclWI GGATC 1 cut(s) 608
AcsI RAATTY 1 cut(s) 287
AcuI CTGAAG 2 cut(s) 135, 419
AfaI GTAC 3 cut(s) 100, 396, 622
AfiI CCNNNNNNNGG 4 cut(s) 30, 95, 169, 588
AflII CTTAAG 1 cut(s) 137
AjnI CCWGG 2 cut(s) 23, 162
AloI GAACNNNNNNTCC 2 cut(s) 158, 190
AluBI AGCT 1 cut(s) 110
AluI AGCT 1 cut(s) 110
Alw21I GWGCWC 1 cut(s) 502
Alw26I GTCTC 3 cut(s) 20, 48, 260
AlwI GGATC 1 cut(s) 608
AlwNI CAGNNNCTG 1 cut(s) 391
AoxI GGCC 2 cut(s) 9, 26
ApeKI GCWGC 2 cut(s) 110, 478
ApoI RAATTY 1 cut(s) 287
Asp718I GGTACC 1 cut(s) 98
AsuHPI GGTGA 2 cut(s) 13, 601
BaeI ACNNNNGTAYC 2 cut(s) 386, 419
BanI GGYRCC 2 cut(s) 85, 98
BanII GRGCYC 1 cut(s) 576
Bbv12I GWGCWC 1 cut(s) 502
BbvI GCAGC 2 cut(s) 97, 490
BccI CCATC 2 cut(s) 313, 448
BciT130I CCWGG 2 cut(s) 25, 164
BcoDI GTCTC 3 cut(s) 20, 48, 260
BfaI CTAG 1 cut(s) 618
BfrI CTTAAG 1 cut(s) 137
BisI GCNGC 2 cut(s) 111, 479
BlsI GCNGC 2 cut(s) 112, 480
BmcAI AGTACT 1 cut(s) 622
Bme1390I CCNGG 2 cut(s) 25, 164
BmiI GGNNCC 2 cut(s) 87, 100
BmrFI CCNGG 2 cut(s) 25, 164
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 1 cut(s) 356
BmuI ACTGGG 1 cut(s) 179
BpmI CTGGAG 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 29
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 95, 169, 588
Bse1I ACTGG 2 cut(s) 174, 220
BseBI CCWGG 2 cut(s) 25, 164
BseDI CCNNGG 1 cut(s) 29
BseGI GGATG 1 cut(s) 597
BseLI CCNNNNNNNGG 4 cut(s) 30, 95, 169, 588
BseMII CTCAG 1 cut(s) 612
BseNI ACTGG 2 cut(s) 174, 220
BseRI GAGGAG 2 cut(s) 8, 428
BseXI GCAGC 2 cut(s) 97, 490
Bsh1236I CGCG 1 cut(s) 158
BshFI GGCC 2 cut(s) 11, 28
BshNI GGYRCC 2 cut(s) 85, 98
BsiHKAI GWGCWC 1 cut(s) 502
BslI CCNNNNNNNGG 4 cut(s) 30, 95, 169, 588
BsmAI GTCTC 3 cut(s) 20, 48, 260
BsnI GGCC 2 cut(s) 11, 28
Bsp1286I GDGCHC 2 cut(s) 502, 576
Bsp143I GATC 3 cut(s) 531, 594, 613
BspACI CCGC 2 cut(s) 156, 570
BspANI GGCC 2 cut(s) 11, 28
BspCNI CTCAG 1 cut(s) 611
BspFNI CGCG 1 cut(s) 158
BspLI GGNNCC 2 cut(s) 87, 100
BspPI GGATC 1 cut(s) 608
BspT107I GGYRCC 2 cut(s) 85, 98
BspTI CTTAAG 1 cut(s) 137
BsrI ACTGG 2 cut(s) 174, 220
BssECI CCNNGG 1 cut(s) 29
BssMI GATC 3 cut(s) 531, 594, 613
BssT1I CCWWGG 1 cut(s) 29
Bst2UI CCWGG 2 cut(s) 25, 164
Bst4CI ACNGT 3 cut(s) 241, 355, 387
BstAFI CTTAAG 1 cut(s) 137
BstC8I GCNNGC 2 cut(s) 160, 572
BstDEI CTNAG 3 cut(s) 270, 281, 598
BstENI CCTNNNNNAGG 1 cut(s) 586
BstF5I GGATG 1 cut(s) 597
BstFNI CGCG 1 cut(s) 158
BstKTI GATC 3 cut(s) 534, 597, 616
BstMAI GTCTC 3 cut(s) 20, 48, 260
BstMBI GATC 3 cut(s) 531, 594, 613
BstMWI GCNNNNNNNGC 1 cut(s) 576
BstNI CCWGG 2 cut(s) 25, 164
BstSCI CCNGG 2 cut(s) 23, 162
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 2 cut(s) 97, 490
BstXI CCANNNNNNTGG 1 cut(s) 200
BsuRI GGCC 2 cut(s) 11, 28
BtsCI GGATG 1 cut(s) 597
Cac8I GCNNGC 2 cut(s) 160, 572
CaiI CAGNNNCTG 1 cut(s) 391
CseI GACGC 1 cut(s) 82
Csp6I GTAC 3 cut(s) 99, 395, 621
CviAII CATG 4 cut(s) 62, 95, 200, 527
CviJI RGCY 7 cut(s) 11, 28, 50, 110, 162, 229, 574
CviKI_1 RGCY 7 cut(s) 11, 28, 50, 110, 162, 229, 574
CviQI GTAC 3 cut(s) 99, 395, 621
DdeI CTNAG 3 cut(s) 270, 281, 598
DpnI GATC 3 cut(s) 533, 596, 615
DpnII GATC 3 cut(s) 531, 594, 613
Eco130I CCWWGG 1 cut(s) 29
Eco24I GRGCYC 1 cut(s) 576
Eco32I GATATC 1 cut(s) 183
Eco57I CTGAAG 2 cut(s) 135, 419
EcoNI CCTNNNNNAGG 1 cut(s) 586
EcoRII CCWGG 2 cut(s) 23, 162
EcoRV GATATC 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 29
EcoT38I GRGCYC 1 cut(s) 576
ErhI CCWWGG 1 cut(s) 29
FaeI CATG 4 cut(s) 65, 98, 203, 530
FatI CATG 4 cut(s) 61, 94, 199, 526
FauI CCCGC 1 cut(s) 563
Fnu4HI GCNGC 2 cut(s) 111, 479
FokI GGATG 1 cut(s) 604
FriOI GRGCYC 1 cut(s) 576
Fsp4HI GCNGC 2 cut(s) 111, 479
FspBI CTAG 1 cut(s) 618
GluI GCNGC 2 cut(s) 111, 479
GsuI CTGGAG 1 cut(s) 237
HaeIII GGCC 2 cut(s) 11, 28
HgaI GACGC 1 cut(s) 82
Hin1II CATG 4 cut(s) 65, 98, 203, 530
HincII GTYRAC 1 cut(s) 276
HindII GTYRAC 1 cut(s) 276
HinfI GANTC 4 cut(s) 53, 189, 314, 470
HpaI GTTAAC 1 cut(s) 276
HphI GGTGA 2 cut(s) 13, 601
Hpy166II GTNNAC 2 cut(s) 276, 460
Hpy188I TCNGA 3 cut(s) 249, 319, 601
Hpy188III TCNNGA 2 cut(s) 178, 186
Hpy8I GTNNAC 2 cut(s) 276, 460
Hpy99I CGWCG 1 cut(s) 539
HpyCH4III ACNGT 3 cut(s) 241, 355, 387
HpyCH4V TGCA 3 cut(s) 199, 347, 478
HpyF10VI GCNNNNNNNGC 1 cut(s) 576
HpyF3I CTNAG 3 cut(s) 270, 281, 598
Hsp92II CATG 4 cut(s) 65, 98, 203, 530
KpnI GGTACC 1 cut(s) 102
KspAI GTTAAC 1 cut(s) 276
Kzo9I GATC 3 cut(s) 531, 594, 613
LmnI GCTCC 2 cut(s) 415, 584
Lsp1109I GCAGC 2 cut(s) 97, 490
LweI GCATC 1 cut(s) 356
MaeI CTAG 1 cut(s) 618
MaeIII GTNAC 1 cut(s) 607
MalI GATC 3 cut(s) 533, 596, 615
MboI GATC 3 cut(s) 531, 594, 613
MboII GAAGA 4 cut(s) 46, 128, 288, 499
MhlI GDGCHC 2 cut(s) 502, 576
MluCI AATT 4 cut(s) 80, 287, 504, 603
MlyI GAGTC 1 cut(s) 183
MnlI CCTC 3 cut(s) 29, 243, 406
MseI TTAA 3 cut(s) 138, 275, 507
MspCI CTTAAG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 25, 164
MvaI CCWGG 2 cut(s) 25, 164
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 1 cut(s) 576
NdeII GATC 3 cut(s) 531, 594, 613
NlaIII CATG 4 cut(s) 65, 98, 203, 530
NlaIV GGNNCC 2 cut(s) 87, 100
NmuCI GTSAC 1 cut(s) 607
PfeI GAWTC 3 cut(s) 53, 314, 470
PflMI CCANNNNNTGG 1 cut(s) 95
PkrI GCNGC 2 cut(s) 112, 480
PleI GAGTC 1 cut(s) 183
PpsI GAGTC 1 cut(s) 183
Psp6I CCWGG 2 cut(s) 23, 162
PspGI CCWGG 2 cut(s) 23, 162
PspN4I GGNNCC 2 cut(s) 87, 100
PstNI CAGNNNCTG 1 cut(s) 391
RsaI GTAC 3 cut(s) 100, 396, 622
RsaNI GTAC 3 cut(s) 99, 395, 621
SaqAI TTAA 3 cut(s) 138, 275, 507
SatI GCNGC 2 cut(s) 111, 479
Sau3AI GATC 3 cut(s) 531, 594, 613
ScaI AGTACT 1 cut(s) 622
SchI GAGTC 1 cut(s) 183
ScrFI CCNGG 2 cut(s) 25, 164
SduI GDGCHC 2 cut(s) 502, 576
SetI ASST 5 cut(s) 26, 112, 134, 499, 547
SfaNI GCATC 1 cut(s) 356
SmlI CTYRAG 2 cut(s) 45, 137
SmoI CTYRAG 2 cut(s) 45, 137
Sse9I AATT 4 cut(s) 80, 287, 504, 603
SsiI CCGC 2 cut(s) 156, 570
SspMI CTAG 1 cut(s) 618
StyD4I CCNGG 2 cut(s) 23, 162
StyI CCWWGG 1 cut(s) 29
TaaI ACNGT 3 cut(s) 241, 355, 387
TaqI TCGA 3 cut(s) 350, 534, 552
TasI AATT 4 cut(s) 80, 287, 504, 603
TatI WGTACW 1 cut(s) 620
TfiI GAWTC 3 cut(s) 53, 314, 470
Tru1I TTAA 3 cut(s) 138, 275, 507
Tru9I TTAA 3 cut(s) 138, 275, 507
TseFI GTSAC 1 cut(s) 607
TseI GCWGC 2 cut(s) 110, 478
Tsp45I GTSAC 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 95
Vha464I CTTAAG 1 cut(s) 137
XagI CCTNNNNNAGG 1 cut(s) 586
XapI RAATTY 1 cut(s) 287
XspI CTAG 1 cut(s) 618
ZrmI AGTACT 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.