Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0020831

Physical Location & Seq

Genomic Coordinates Reverse (-)

26880966 .. 26884079

Gene Structure 3114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G67380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGATAGATACGCTTTTCTTCTTGTTCTTCCTCTTCTTCGATTCTCCTCTTCGACGTCTCTTGTTACTGTGCGCCGTCTTAGCCTTACGTGCGCCAACGGCGCACTCTCCTATCCTACGCTCATCTATCGTCACTCCCACAGCGAGAGCTGTCTCGGAAGTTTCCGGTTGTACTACGATCGATCCAGATTTTCTCGTAGAGATCTCTGATTCTAACCAGACGCGGGCGATGTCGAAAGCTCGTGTGTACACCGAAGTCAATGTGATTCGACCCAAGGATTATTGGGATTACGAGTCACTCATTGTTCAATGGGGGGAGCAAGATGATTATGAGGTAGTAAGGAAGGTAGGGCGTGGAAAATATAGTGAAGTTTTCGAGGGTATAAATGTGAACAGCAAGGAGAAGTGCATTATCAAAATCCTCAAACCTGTTAAGAAAAAGAAGATAAGAAGAGAGATTAAAATACTTCAGAACCTATGCGGTGGGCCAAATATTGTCAAGCTGCTTGATGTTGTTAGAGATCAACATTCGAAAACTCCAAGCTTGATATTTGAATATGTTAACAGCACAGACTTTAAAGTTTTGTATCCTACGTTGACTGATTACGACATTCGTTACTACATCTATGAGCTGTTGAAGGCACTAGACTTCTGCCATTCACAAGGAATAATGCACAGAGACGTCAAGCCTCATAATGTTATGATTGACCATGAGCTGCGTAAGCTTCGTCTTATAGATTGGGGTCTTGCTGAGTTTTACCACCCTGGAAAAGAGTATAATGTCCGTGTTGCCTCAAGATATTTCAAGGGACCTGAACTTCTTGTGGACTTGCAAGACTATGACTATTCATTGGATATGTGGAGTCTTGGCTGTATGTTTGCAGGGATGATATTCCGTAAGGAACCTTTCTTCTACGGCCATGACAACCAGGATCAGCTAGTGAAAATCGCCAAGGTGCTTGGGACTGACGAATTGAATGCTTATCTGAACAAGTACCAGTTAGAACTTGATCCACAACTGGAAGCACTTGTTGGGCGGCATAGCAGGAAACCTTGGTCCAAATTCATCAACGCAGACAATCAGCACTTAGTTTCACCCGAGGCGATTGATTTCCTCGACAAGCTACTTCGGTATGATCATCAAGACAGATTAACTGCAAAAGAAGCCATGGCGCACGCTTACTTCGCCCAAGTTAGGGCAGCAGAAACCAGCAGAATGAGAAGTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005956 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010212 GO:0010225 GO:0010332 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0042752 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048511 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03008 ko04064 ko04137 ko04139 ko04310 ko04520 ko04712 ko05162 ko05168 ko05169 map03008 map04064 map04137 map04139 map04310 map04520 map04712 map05162 map05168 map05169

Pfam Domains

Protein Families

Pkinase

Protein Analysis

409

Amino Acids

47.64

Weight (kDa)

8.06

Isoelectric Point (pI)

36.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	110 - 395	5.4e-63	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	112 - 311	7.2e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50000 AT5G67380 AT5G67380
rosa_laevigata	RLG00000029453
rosa_multiflora	Rmu_co8014206.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	58, 684
AccII	CGCG	1 cut(s)	223
AciI	CCGC	3 cut(s)	223, 480, 1036
AclWI	GGATC	3 cut(s)	176, 939, 1004
AcoI	YGGCCR	1 cut(s)	916
AcsI	RAATTY	1 cut(s)	1061
AcuI	CTGAAG	1 cut(s)	452
AcyI	GRCGYC	2 cut(s)	55, 681
AfaI	GTAC	3 cut(s)	172, 248, 995
AfiI	CCNNNNNNNGG	3 cut(s)	223, 1194, 1195
AgsI	TTSAA	5 cut(s)	308, 554, 637, 805, 976
AjnI	CCWGG	2 cut(s)	763, 927
AjuI	GAANNNNNNNTTGG	2 cut(s)	1014, 1046
AluBI	AGCT	9 cut(s)	149, 239, 502, 543, 631, 715, 724, 937, 1123
AluI	AGCT	9 cut(s)	149, 239, 502, 543, 631, 715, 724, 937, 1123
Alw26I	GTCTC	3 cut(s)	62, 157, 672
AlwI	GGATC	3 cut(s)	176, 939, 1004
Ama87I	CYCGRG	1 cut(s)	1097
AoxI	GGCC	2 cut(s)	485, 916
ApeKI	GCWGC	3 cut(s)	502, 715, 1199
ApoI	RAATTY	1 cut(s)	1061
AspLEI	GCGC	4 cut(s)	74, 94, 103, 1174
AspS9I	GGNCC	3 cut(s)	485, 809, 1056
AsuHPI	GGTGA	1 cut(s)	1086
AsuII	TTCGAA	1 cut(s)	530
AvaI	CYCGRG	1 cut(s)	1097
AvaII	GGWCC	2 cut(s)	809, 1056
BauI	CACGAG	1 cut(s)	240
BbvI	GCAGC	3 cut(s)	489, 702, 1211
BceAI	ACGGC	3 cut(s)	59, 114, 931
BcgI	CGANNNNNNTGC	2 cut(s)	959, 993
BciT130I	CCWGG	2 cut(s)	765, 929
BciVI	GTATCC	1 cut(s)	597
BclI	TGATCA	1 cut(s)	1135
BcoDI	GTCTC	3 cut(s)	62, 157, 672
BfaI	CTAG	2 cut(s)	644, 938
BfuI	GTATCC	1 cut(s)	597
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	4 cut(s)	503, 716, 1037, 1200
BlsI	GCNGC	4 cut(s)	504, 717, 1038, 1201
Bme1390I	CCNGG	2 cut(s)	765, 929
Bme18I	GGWCC	2 cut(s)	809, 1056
BmeT110I	CYCGRG	1 cut(s)	1097
BmgT120I	GGNCC	3 cut(s)	485, 809, 1056
BmiI	GGNNCC	2 cut(s)	810, 903
BmrFI	CCNGG	2 cut(s)	765, 929
Bpu14I	TTCGAA	1 cut(s)	530
BpuEI	CTTGAG	1 cut(s)	778
Bsa29I	ATCGAT	1 cut(s)	180
BsaAI	YACGTR	1 cut(s)	89
BsaHI	GRCGYC	2 cut(s)	55, 681
BsaJI	CCNNGG	6 cut(s)	273, 763, 951, 1052, 1098, 1167
BsaWI	WCCGGW	1 cut(s)	164
Bsc4I	CCNNNNNNNGG	3 cut(s)	223, 1194, 1195
Bse1I	ACTGG	2 cut(s)	997, 1023
BseBI	CCWGG	2 cut(s)	765, 929
BseCI	ATCGAT	1 cut(s)	180
BseDI	CCNNGG	6 cut(s)	273, 763, 951, 1052, 1098, 1167
BseGI	GGATG	1 cut(s)	891
BseLI	CCNNNNNNNGG	3 cut(s)	223, 1194, 1195
BseMII	CTCAG	1 cut(s)	741
BseNI	ACTGG	2 cut(s)	997, 1023
BseRI	GAGGAG	1 cut(s)	36
BseXI	GCAGC	3 cut(s)	489, 702, 1211
Bsh1236I	CGCG	1 cut(s)	223
Bsh1285I	CGRYCG	1 cut(s)	180
BshFI	GGCC	2 cut(s)	487, 918
BshVI	ATCGAT	1 cut(s)	180
BsiEI	CGRYCG	1 cut(s)	180
BsiHKCI	CYCGRG	1 cut(s)	1097
BsiSI	CCGG	1 cut(s)	165
BslFI	GGGAC	2 cut(s)	822, 976
BslI	CCNNNNNNNGG	3 cut(s)	223, 1194, 1195
BsmAI	GTCTC	3 cut(s)	62, 157, 672
BsmBI	CGTCTC	2 cut(s)	62, 672
BsmFI	GGGAC	2 cut(s)	822, 976
BsmI	GAATGC	1 cut(s)	982
BsnI	GGCC	2 cut(s)	487, 918
BsoBI	CYCGRG	1 cut(s)	1097
Bsp119I	TTCGAA	1 cut(s)	530
Bsp1407I	TGTACA	1 cut(s)	246
Bsp143I	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
Bsp19I	CCATGG	1 cut(s)	1167
BspACI	CCGC	3 cut(s)	223, 480, 1036
BspANI	GGCC	2 cut(s)	487, 918
BspCNI	CTCAG	1 cut(s)	742
BspDI	ATCGAT	1 cut(s)	180
BspFNI	CGCG	1 cut(s)	223
BspLI	GGNNCC	2 cut(s)	810, 903
BspPI	GGATC	3 cut(s)	176, 939, 1004
BspT104I	TTCGAA	1 cut(s)	530
BsrGI	TGTACA	1 cut(s)	246
BsrI	ACTGG	2 cut(s)	997, 1023
BssECI	CCNNGG	6 cut(s)	273, 763, 951, 1052, 1098, 1167
BssMI	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
BssNI	GRCGYC	2 cut(s)	55, 681
BssSI	CACGAG	1 cut(s)	240
BssT1I	CCWWGG	4 cut(s)	273, 951, 1052, 1167
Bst2BI	CACGAG	1 cut(s)	240
Bst2UI	CCWGG	2 cut(s)	765, 929
Bst4CI	ACNGT	1 cut(s)	69
Bst6I	CTCTTC	3 cut(s)	38, 54, 445
BstACI	GRCGYC	2 cut(s)	55, 681
BstAUI	TGTACA	1 cut(s)	246
BstBAI	YACGTR	1 cut(s)	89
BstBI	TTCGAA	1 cut(s)	530
BstC8I	GCNNGC	2 cut(s)	225, 1176
BstDEI	CTNAG	3 cut(s)	79, 750, 1087
BstDSI	CCRYGG	1 cut(s)	1167
BstF5I	GGATG	1 cut(s)	891
BstFNI	CGCG	1 cut(s)	223
BstHHI	GCGC	4 cut(s)	74, 94, 103, 1174
BstKTI	GATC	7 cut(s)	180, 184, 204, 523, 934, 1012, 1138
BstMAI	GTCTC	3 cut(s)	62, 157, 672
BstMBI	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
BstMCI	CGRYCG	1 cut(s)	180
BstMWI	GCNNNNNNNGC	7 cut(s)	80, 89, 98, 100, 721, 1163, 1184
BstNI	CCWGG	2 cut(s)	765, 929
BstSCI	CCNGG	2 cut(s)	763, 927
BstUI	CGCG	1 cut(s)	223
BstV1I	GCAGC	3 cut(s)	489, 702, 1211
BstX2I	RGATCY	1 cut(s)	201
BstYI	RGATCY	1 cut(s)	201
Bsu15I	ATCGAT	1 cut(s)	180
BsuI	GTATCC	1 cut(s)	597
BsuRI	GGCC	2 cut(s)	487, 918
BsuTUI	ATCGAT	1 cut(s)	180
BtgI	CCRYGG	1 cut(s)	1167
BtgZI	GCGATG	1 cut(s)	242
BtsCI	GGATG	1 cut(s)	891
Cac8I	GCNNGC	2 cut(s)	225, 1176
CfoI	GCGC	4 cut(s)	74, 94, 103, 1174
Cfr13I	GGNCC	3 cut(s)	485, 809, 1056
ClaI	ATCGAT	1 cut(s)	180
CseI	GACGC	1 cut(s)	229
Csp6I	GTAC	3 cut(s)	171, 247, 994
CviAII	CATG	3 cut(s)	710, 920, 1168
CviQI	GTAC	3 cut(s)	171, 247, 994
DdeI	CTNAG	3 cut(s)	79, 750, 1087
DpnI	GATC	7 cut(s)	179, 183, 203, 522, 933, 1011, 1137
DpnII	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
DraI	TTTAAA	1 cut(s)	577
EaeI	YGGCCR	1 cut(s)	916
Eam1104I	CTCTTC	3 cut(s)	38, 54, 445
EarI	CTCTTC	3 cut(s)	38, 54, 445
Eco130I	CCWWGG	4 cut(s)	273, 951, 1052, 1167
Eco47I	GGWCC	2 cut(s)	809, 1056
Eco57I	CTGAAG	1 cut(s)	452
Eco88I	CYCGRG	1 cut(s)	1097
EcoO109I	RGGNCCY	1 cut(s)	809
EcoRII	CCWGG	2 cut(s)	763, 927
EcoT14I	CCWWGG	4 cut(s)	273, 951, 1052, 1167
ErhI	CCWWGG	4 cut(s)	273, 951, 1052, 1167
Esp3I	CGTCTC	2 cut(s)	62, 672
FaeI	CATG	3 cut(s)	713, 923, 1171
FaqI	GGGAC	2 cut(s)	822, 976
FatI	CATG	3 cut(s)	709, 919, 1167
FauI	CCCGC	1 cut(s)	216
FbaI	TGATCA	1 cut(s)	1135
Fnu4HI	GCNGC	4 cut(s)	503, 716, 1037, 1200
FokI	GGATG	1 cut(s)	898
Fsp4HI	GCNGC	4 cut(s)	503, 716, 1037, 1200
FspBI	CTAG	2 cut(s)	644, 938
GlaI	GCGC	4 cut(s)	73, 93, 102, 1173
GluI	GCNGC	4 cut(s)	503, 716, 1037, 1200
HaeIII	GGCC	2 cut(s)	487, 918
HapII	CCGG	1 cut(s)	165
HgaI	GACGC	1 cut(s)	229
HhaI	GCGC	4 cut(s)	74, 94, 103, 1174
Hin1I	GRCGYC	2 cut(s)	55, 681
Hin1II	CATG	3 cut(s)	713, 923, 1171
Hin6I	GCGC	4 cut(s)	72, 92, 101, 1172
HinP1I	GCGC	4 cut(s)	72, 92, 101, 1172
HincII	GTYRAC	2 cut(s)	562, 597
HindII	GTYRAC	2 cut(s)	562, 597
HindIII	AAGCTT	2 cut(s)	541, 722
HinfI	GANTC	5 cut(s)	41, 209, 265, 293, 862
HpaI	GTTAAC	1 cut(s)	562
HpaII	CCGG	1 cut(s)	165
HphI	GGTGA	1 cut(s)	1086
Hpy166II	GTNNAC	6 cut(s)	247, 249, 391, 562, 597, 826
Hpy188I	TCNGA	4 cut(s)	157, 208, 471, 987
Hpy188III	TCNNGA	3 cut(s)	185, 795, 1142
Hpy8I	GTNNAC	6 cut(s)	247, 249, 391, 562, 597, 826
Hpy99I	CGWCG	1 cut(s)	57
HpyAV	CCTTC	2 cut(s)	337, 631
HpyCH4III	ACNGT	1 cut(s)	69
HpyCH4IV	ACGT	4 cut(s)	55, 88, 593, 681
HpyCH4V	TGCA	5 cut(s)	408, 673, 832, 881, 1157
HpyF10VI	GCNNNNNNNGC	7 cut(s)	80, 89, 98, 100, 721, 1163, 1184
HpyF3I	CTNAG	3 cut(s)	79, 750, 1087
HpySE526I	ACGT	4 cut(s)	55, 88, 593, 681
Hsp92I	GRCGYC	2 cut(s)	55, 681
Hsp92II	CATG	3 cut(s)	713, 923, 1171
HspAI	GCGC	4 cut(s)	72, 92, 101, 1172
Ksp22I	TGATCA	1 cut(s)	1135
KspAI	GTTAAC	1 cut(s)	562
Kzo9I	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
LmnI	GCTCC	1 cut(s)	316
Lsp1109I	GCAGC	3 cut(s)	489, 702, 1211
MaeI	CTAG	2 cut(s)	644, 938
MaeII	ACGT	4 cut(s)	55, 88, 593, 681
MaeIII	GTNAC	4 cut(s)	63, 130, 294, 614
MalI	GATC	7 cut(s)	179, 183, 203, 522, 933, 1011, 1137
MboI	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
MboII	GAAGA	8 cut(s)	10, 19, 25, 28, 41, 454, 462, 901
MflI	RGATCY	1 cut(s)	201
MluCI	AATT	2 cut(s)	971, 1061
MlyI	GAGTC	2 cut(s)	302, 871
MnlI	CCTC	9 cut(s)	41, 57, 325, 370, 431, 699, 802, 1093, 1124
MseI	TTAA	5 cut(s)	432, 459, 561, 576, 1151
MspI	CCGG	1 cut(s)	165
MspR9I	CCNGG	2 cut(s)	765, 929
Mva1269I	GAATGC	1 cut(s)	982
MvaI	CCWGG	2 cut(s)	765, 929
MvnI	CGCG	1 cut(s)	223
MwoI	GCNNNNNNNGC	7 cut(s)	80, 89, 98, 100, 721, 1163, 1184
NcoI	CCATGG	1 cut(s)	1167
NdeII	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
NlaIII	CATG	3 cut(s)	713, 923, 1171
NlaIV	GGNNCC	2 cut(s)	810, 903
NmuCI	GTSAC	2 cut(s)	130, 294
NspV	TTCGAA	1 cut(s)	530
PctI	GAATGC	1 cut(s)	982
PfeI	GAWTC	3 cut(s)	41, 209, 265
PkrI	GCNGC	4 cut(s)	504, 717, 1038, 1201
Ple19I	CGATCG	1 cut(s)	180
PleI	GAGTC	2 cut(s)	301, 870
PpsI	GAGTC	2 cut(s)	301, 870
Ppu21I	YACGTR	1 cut(s)	89
PpuMI	RGGWCCY	1 cut(s)	809
Psp5II	RGGWCCY	1 cut(s)	809
Psp6I	CCWGG	2 cut(s)	763, 927
PspGI	CCWGG	2 cut(s)	763, 927
PspN4I	GGNNCC	2 cut(s)	810, 903
PspPI	GGNCC	3 cut(s)	485, 809, 1056
PspPPI	RGGWCCY	1 cut(s)	809
PsuI	RGATCY	1 cut(s)	201
PvuI	CGATCG	1 cut(s)	180
RsaI	GTAC	3 cut(s)	172, 248, 995
RsaNI	GTAC	3 cut(s)	171, 247, 994
SaqAI	TTAA	5 cut(s)	432, 459, 561, 576, 1151
SatI	GCNGC	4 cut(s)	503, 716, 1037, 1200
Sau3AI	GATC	7 cut(s)	177, 181, 201, 520, 931, 1009, 1135
Sau96I	GGNCC	3 cut(s)	485, 809, 1056
SchI	GAGTC	2 cut(s)	302, 871
ScrFI	CCNGG	2 cut(s)	765, 929
SfuI	TTCGAA	1 cut(s)	530
SinI	GGWCC	2 cut(s)	809, 1056
SmlI	CTYRAG	1 cut(s)	793
SmoI	CTYRAG	1 cut(s)	793
Sse9I	AATT	2 cut(s)	971, 1061
SsiI	CCGC	3 cut(s)	223, 480, 1036
SspI	AATATT	1 cut(s)	493
SspMI	CTAG	2 cut(s)	644, 938
StyD4I	CCNGG	2 cut(s)	763, 927
StyI	CCWWGG	4 cut(s)	273, 951, 1052, 1167
TaaI	ACNGT	1 cut(s)	69
TaiI	ACGT	4 cut(s)	58, 91, 596, 684
TaqI	TCGA	8 cut(s)	39, 52, 180, 233, 268, 375, 530, 1116
TasI	AATT	2 cut(s)	971, 1061
TatI	WGTACW	2 cut(s)	170, 246
TauI	GCSGC	1 cut(s)	1039
TfiI	GAWTC	3 cut(s)	41, 209, 265
Tru1I	TTAA	5 cut(s)	432, 459, 561, 576, 1151
Tru9I	TTAA	5 cut(s)	432, 459, 561, 576, 1151
TseFI	GTSAC	2 cut(s)	130, 294
TseI	GCWGC	3 cut(s)	502, 715, 1199
Tsp45I	GTSAC	2 cut(s)	130, 294
TspDTI	ATGAA	2 cut(s)	837, 1054
TspGWI	ACGGA	2 cut(s)	773, 884
VpaK11BI	GGWCC	2 cut(s)	809, 1056
XapI	RAATTY	1 cut(s)	1061
XspI	CTAG	2 cut(s)	644, 938
ZraI	GACGTC	2 cut(s)	56, 682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.