zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g03572 |
| malus_domestica | MD00G1107100.v1.1 |
| prunus_persica | Prupe.7G239900_v2.0.a1 |
| pyrus_communis | pycom15g15750 |
| rosa_chinensis | RchiOBHm_Chr2g0089101 |
| rosa_laevigata | RLG00000015991 |
| rosa_multiflora | Rmu_sc0005510.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00152250 |
| rosa_rugosa | Rorug01G0487400 |
| rosa_samantha | Rh2AG042900 Rh2BG041400 Rh2CG043000 Rh2DG042000 |
| rosa_wichuraiana | Rw2G003470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 49, 440 |
| AccIII | TCCGGA | 1 cut(s) | 697 |
| AciI | CCGC | 3 cut(s) | 63, 225, 848 |
| AclI | AACGTT | 1 cut(s) | 258 |
| AclWI | GGATC | 1 cut(s) | 501 |
| AcsI | RAATTY | 1 cut(s) | 476 |
| AcuI | CTGAAG | 3 cut(s) | 375, 399, 618 |
| AfaI | GTAC | 3 cut(s) | 137, 376, 749 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 49, 440, 599, 853 |
| AflIII | ACRYGT | 1 cut(s) | 371 |
| AgsI | TTSAA | 3 cut(s) | 83, 280, 329 |
| AluBI | AGCT | 3 cut(s) | 306, 596, 860 |
| AluI | AGCT | 3 cut(s) | 306, 596, 860 |
| Alw21I | GWGCWC | 1 cut(s) | 774 |
| AlwI | GGATC | 1 cut(s) | 501 |
| Aor13HI | TCCGGA | 1 cut(s) | 697 |
| ApeKI | GCWGC | 3 cut(s) | 209, 291, 306 |
| ApoI | RAATTY | 1 cut(s) | 476 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 384 |
| AsuHPI | GGTGA | 3 cut(s) | 311, 743, 748 |
| AsuII | TTCGAA | 1 cut(s) | 356 |
| BanII | GRGCYC | 1 cut(s) | 743 |
| Bbv12I | GWGCWC | 1 cut(s) | 774 |
| BbvI | GCAGC | 3 cut(s) | 221, 293, 303 |
| BccI | CCATC | 4 cut(s) | 238, 456, 489, 758 |
| BclI | TGATCA | 1 cut(s) | 634 |
| BfaI | CTAG | 1 cut(s) | 761 |
| BfmI | CTRYAG | 1 cut(s) | 408 |
| BisI | GCNGC | 3 cut(s) | 210, 292, 307 |
| BlsI | GCNGC | 3 cut(s) | 211, 293, 308 |
| BmcAI | AGTACT | 1 cut(s) | 749 |
| BmrI | ACTGGG | 2 cut(s) | 354, 784 |
| BmsI | GCATC | 3 cut(s) | 190, 413, 434 |
| BmuI | ACTGGG | 2 cut(s) | 354, 784 |
| BpmI | CTGGAG | 1 cut(s) | 606 |
| Bpu10I | CCTNAGC | 2 cut(s) | 453, 486 |
| Bpu14I | TTCGAA | 1 cut(s) | 356 |
| BsaWI | WCCGGW | 1 cut(s) | 697 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 49, 440, 599, 853 |
| Bse1I | ACTGG | 4 cut(s) | 143, 349, 623, 779 |
| BseAI | TCCGGA | 1 cut(s) | 697 |
| BseGI | GGATG | 6 cut(s) | 10, 181, 291, 448, 481, 556 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 49, 440, 599, 853 |
| BseMII | CTCAG | 1 cut(s) | 735 |
| BseNI | ACTGG | 4 cut(s) | 143, 349, 623, 779 |
| BseRI | GAGGAG | 3 cut(s) | 209, 212, 662 |
| BseXI | GCAGC | 3 cut(s) | 221, 293, 303 |
| BseYI | CCCAGC | 1 cut(s) | 146 |
| BsgI | GTGCAG | 2 cut(s) | 292, 310 |
| BsiHKAI | GWGCWC | 1 cut(s) | 774 |
| BsiSI | CCGG | 1 cut(s) | 698 |
| BslFI | GGGAC | 2 cut(s) | 90, 830 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 49, 440, 599, 853 |
| BsmFI | GGGAC | 2 cut(s) | 90, 830 |
| Bsp119I | TTCGAA | 1 cut(s) | 356 |
| Bsp1286I | GDGCHC | 2 cut(s) | 743, 774 |
| Bsp13I | TCCGGA | 1 cut(s) | 697 |
| Bsp143I | GATC | 3 cut(s) | 493, 572, 634 |
| BspACI | CCGC | 3 cut(s) | 63, 225, 848 |
| BspCNI | CTCAG | 1 cut(s) | 736 |
| BspEI | TCCGGA | 1 cut(s) | 697 |
| BspPI | GGATC | 1 cut(s) | 501 |
| BspT104I | TTCGAA | 1 cut(s) | 356 |
| BsrI | ACTGG | 4 cut(s) | 143, 349, 623, 779 |
| BssMI | GATC | 3 cut(s) | 493, 572, 634 |
| Bst4CI | ACNGT | 1 cut(s) | 439 |
| Bst6I | CTCTTC | 1 cut(s) | 549 |
| BstBI | TTCGAA | 1 cut(s) | 356 |
| BstC8I | GCNNGC | 1 cut(s) | 67 |
| BstDEI | CTNAG | 3 cut(s) | 453, 486, 744 |
| BstF5I | GGATG | 6 cut(s) | 10, 181, 291, 448, 481, 556 |
| BstKTI | GATC | 3 cut(s) | 496, 575, 637 |
| BstMBI | GATC | 3 cut(s) | 493, 572, 634 |
| BstNSI | RCATGY | 1 cut(s) | 375 |
| BstSFI | CTRYAG | 1 cut(s) | 408 |
| BstV1I | GCAGC | 3 cut(s) | 221, 293, 303 |
| BstX2I | RGATCY | 1 cut(s) | 493 |
| BstYI | RGATCY | 1 cut(s) | 493 |
| BtsCI | GGATG | 6 cut(s) | 10, 181, 291, 448, 481, 556 |
| BtsIMutI | CAGTG | 2 cut(s) | 630, 772 |
| Cac8I | GCNNGC | 1 cut(s) | 67 |
| CseI | GACGC | 1 cut(s) | 28 |
| Csp6I | GTAC | 3 cut(s) | 136, 375, 748 |
| CviAII | CATG | 6 cut(s) | 49, 203, 320, 372, 533, 797 |
| CviJI | RGCY | 9 cut(s) | 53, 115, 146, 306, 365, 596, 603, 741, 860 |
| CviKI_1 | RGCY | 9 cut(s) | 53, 115, 146, 306, 365, 596, 603, 741, 860 |
| CviQI | GTAC | 3 cut(s) | 136, 375, 748 |
| DdeI | CTNAG | 3 cut(s) | 453, 486, 744 |
| DpnI | GATC | 3 cut(s) | 495, 574, 636 |
| DpnII | GATC | 3 cut(s) | 493, 572, 634 |
| Eam1104I | CTCTTC | 1 cut(s) | 549 |
| EarI | CTCTTC | 1 cut(s) | 549 |
| EciI | GGCGGA | 1 cut(s) | 214 |
| Eco24I | GRGCYC | 1 cut(s) | 743 |
| Eco57I | CTGAAG | 3 cut(s) | 375, 399, 618 |
| EcoT38I | GRGCYC | 1 cut(s) | 743 |
| FaeI | CATG | 6 cut(s) | 52, 206, 323, 375, 536, 800 |
| FaqI | GGGAC | 2 cut(s) | 90, 830 |
| FatI | CATG | 6 cut(s) | 48, 202, 319, 371, 532, 796 |
| FauI | CCCGC | 2 cut(s) | 70, 855 |
| FbaI | TGATCA | 1 cut(s) | 634 |
| Fnu4HI | GCNGC | 3 cut(s) | 210, 292, 307 |
| FokI | GGATG | 6 cut(s) | 17, 168, 298, 435, 468, 563 |
| FriOI | GRGCYC | 1 cut(s) | 743 |
| Fsp4HI | GCNGC | 3 cut(s) | 210, 292, 307 |
| FspBI | CTAG | 1 cut(s) | 761 |
| GluI | GCNGC | 3 cut(s) | 210, 292, 307 |
| GsaI | CCCAGC | 1 cut(s) | 150 |
| GsuI | CTGGAG | 1 cut(s) | 606 |
| HapII | CCGG | 1 cut(s) | 698 |
| HgaI | GACGC | 1 cut(s) | 28 |
| Hin1II | CATG | 6 cut(s) | 52, 206, 323, 375, 536, 800 |
| HindIII | AAGCTT | 1 cut(s) | 858 |
| HinfI | GANTC | 4 cut(s) | 221, 444, 689, 834 |
| HpaII | CCGG | 1 cut(s) | 698 |
| HphI | GGTGA | 3 cut(s) | 311, 743, 748 |
| Hpy188I | TCNGA | 6 cut(s) | 123, 220, 394, 541, 639, 646 |
| Hpy188III | TCNNGA | 3 cut(s) | 497, 698, 812 |
| HpyAV | CCTTC | 3 cut(s) | 323, 399, 593 |
| HpyCH4III | ACNGT | 1 cut(s) | 439 |
| HpyCH4IV | ACGT | 2 cut(s) | 258, 311 |
| HpyCH4V | TGCA | 5 cut(s) | 245, 291, 309, 319, 673 |
| HpyF3I | CTNAG | 3 cut(s) | 453, 486, 744 |
| HpySE526I | ACGT | 2 cut(s) | 258, 311 |
| Hsp92II | CATG | 6 cut(s) | 52, 206, 323, 375, 536, 800 |
| Kpn2I | TCCGGA | 1 cut(s) | 697 |
| Ksp22I | TGATCA | 1 cut(s) | 634 |
| Kzo9I | GATC | 3 cut(s) | 493, 572, 634 |
| LmnI | GCTCC | 1 cut(s) | 199 |
| Lsp1109I | GCAGC | 3 cut(s) | 221, 293, 303 |
| LweI | GCATC | 3 cut(s) | 190, 413, 434 |
| MaeI | CTAG | 1 cut(s) | 761 |
| MaeII | ACGT | 2 cut(s) | 258, 311 |
| MaeIII | GTNAC | 1 cut(s) | 266 |
| MalI | GATC | 3 cut(s) | 495, 574, 636 |
| MboI | GATC | 3 cut(s) | 493, 572, 634 |
| MboII | GAAGA | 4 cut(s) | 23, 225, 566, 581 |
| MflI | RGATCY | 1 cut(s) | 493 |
| MhlI | GDGCHC | 2 cut(s) | 743, 774 |
| MluCI | AATT | 3 cut(s) | 476, 567, 721 |
| MlyI | GAGTC | 2 cut(s) | 230, 438 |
| MmeI | TCCRAC | 3 cut(s) | 171, 421, 811 |
| MroI | TCCGGA | 1 cut(s) | 697 |
| MroXI | GAANNNNTTC | 1 cut(s) | 384 |
| MseI | TTAA | 1 cut(s) | 159 |
| MslI | CAYNNNNRTG | 1 cut(s) | 801 |
| MspA1I | CMGCKG | 1 cut(s) | 596 |
| MspI | CCGG | 1 cut(s) | 698 |
| NdeII | GATC | 3 cut(s) | 493, 572, 634 |
| NlaIII | CATG | 6 cut(s) | 52, 206, 323, 375, 536, 800 |
| NspI | RCATGY | 1 cut(s) | 375 |
| NspV | TTCGAA | 1 cut(s) | 356 |
| PciI | ACATGT | 1 cut(s) | 371 |
| PdmI | GAANNNNTTC | 1 cut(s) | 384 |
| PfeI | GAWTC | 2 cut(s) | 689, 834 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 49, 440 |
| PkrI | GCNGC | 3 cut(s) | 211, 293, 308 |
| PleI | GAGTC | 2 cut(s) | 229, 438 |
| PpsI | GAGTC | 2 cut(s) | 229, 438 |
| PscI | ACATGT | 1 cut(s) | 371 |
| Psp1406I | AACGTT | 1 cut(s) | 258 |
| PspFI | CCCAGC | 1 cut(s) | 146 |
| PsuI | RGATCY | 1 cut(s) | 493 |
| PvuII | CAGCTG | 1 cut(s) | 596 |
| RsaI | GTAC | 3 cut(s) | 137, 376, 749 |
| RsaNI | GTAC | 3 cut(s) | 136, 375, 748 |
| RseI | CAYNNNNRTG | 1 cut(s) | 801 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 3 cut(s) | 210, 292, 307 |
| Sau3AI | GATC | 3 cut(s) | 493, 572, 634 |
| ScaI | AGTACT | 1 cut(s) | 749 |
| SchI | GAGTC | 2 cut(s) | 230, 438 |
| SduI | GDGCHC | 2 cut(s) | 743, 774 |
| SfaNI | GCATC | 3 cut(s) | 190, 413, 434 |
| SfcI | CTRYAG | 1 cut(s) | 408 |
| SfuI | TTCGAA | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 801 |
| Sse9I | AATT | 3 cut(s) | 476, 567, 721 |
| SsiI | CCGC | 3 cut(s) | 63, 225, 848 |
| SspMI | CTAG | 1 cut(s) | 761 |
| TaaI | ACNGT | 1 cut(s) | 439 |
| TaiI | ACGT | 2 cut(s) | 261, 314 |
| TaqI | TCGA | 3 cut(s) | 94, 356, 717 |
| TasI | AATT | 3 cut(s) | 476, 567, 721 |
| TatI | WGTACW | 2 cut(s) | 374, 747 |
| TfiI | GAWTC | 2 cut(s) | 689, 834 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TscAI | CASTG | 2 cut(s) | 637, 779 |
| TseI | GCWGC | 3 cut(s) | 209, 291, 306 |
| TspDTI | ATGAA | 9 cut(s) | 24, 37, 219, 432, 567, 579, 599, 693, 831 |
| TspGWI | ACGGA | 1 cut(s) | 177 |
| TspRI | CASTG | 2 cut(s) | 637, 779 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 49, 440 |
| XapI | RAATTY | 1 cut(s) | 476 |
| XceI | RCATGY | 1 cut(s) | 375 |
| XmnI | GAANNNNTTC | 1 cut(s) | 384 |
| XspI | CTAG | 1 cut(s) | 761 |
| ZrmI | AGTACT | 1 cut(s) | 749 |