MD00G1107100.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0016723
Physical Location & Seq
Reverse (-)
22453951 .. 22457169
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1107100.v1.1.491

Sequence Viewer

Length: 1743 bp
ATGGAGGAAGAGTTGGTGAAGAGAAACACCGATTGCGTCTATTTCTTGGCTTCTCCTCTCACATGCAAGAAGGGAATTGATTGCGAGTTTCGACACAGCAAGATTGCGAGGCTCAACCCGAAGGAATGCTGGTACTGGTTGGCTGGGAATTGTCTCAACCCGACCTGTGCTTTTCGACACCCTCCATTGGATGGGCATGGTGGAACACCATCAGAGTCTTCCCCGCCTTCTGTGACTTCAAACAAGACCAGTGTTCCTTGTTACTTTTACTCCAATGGCTTCTGCAGCAAAGGTGATAAATGCTCTTTCTTGCATGATACTGATAGTAACGCATCAAATGGGAAATCTTCAAAGACAGCCTCTGCATGTAATGAAGCACTTGCGCTTACTTCAGAAAACGAGGCAGCTGCAGGGAATGGAGCACTTGCACGCATCTCAGAAAGCAAGGCACCTGCAGGAAACGAAGAACTTGCACGCACTTCAGAAAACAAGGCACCTGCAGGAAACGAAGCACTTGCACTTAATTCAGAAACCAAGGCATCTGTAGGAAATGACACAATGTCAGCGCCAAGAATCACACATCTCAACCCTTCTGAAACTGCCTCGAAGGCAATAGTTGGTACAAGATTCCAGCACAAAGAGAATCTTAGTTATTTTGAGCAGCGGGTACAAAGAGATGTTCCACAGAAAAGTGTCTATACTCAGATTTCTACGTCTGGAGATGAAGAGGCTGGTGAAATTAGGTCAGAGAATTCTTCTCAAAAAAAAATTAGGTCAGACTCGCTTCCAGAAGATAGCTCTATTCGTACCAAATCTCATTCATGGACAGATCAGAGTTCAGAGGATGAAGATGATGACCTTGTGCCAGAGGAACGCTGGGAATCCTCCCCAGGATTTGATGTTCTTGTTGATGGAAAATCAGACAATTTGGGTTGTGACGATGATCAGGAGTACTTTCCAACACTTCACGGGGAGCACAGGGAGCTGAATAACCGCTTCTTGGGCTATGATTTTGAAAATCCAGACGAGTATGTTCCCGAATATCCTGATGCTAGACTTCTACATGACAGAGATATGTACAATGACTGTCTGGATACCAGGATTATTTTTGGTAATCAGGGACCAAATCCTGTCTACACGAAGGAGAGAATGTCGGATTCGATGTTCTCCAGCAAGAGGAAACATATGCCAAGGGAACTGTTCGATGGTGACGAGGATTTTTTGGATCTCCGAGACCGCCTGAGAAGGCGAAGAGTGACTGATGGTCGTTCAATTACAGGCTTATCAAGAAGGCACGAATCACTTGGATTGTTTGGCAGGCCCCAAAGACATGGACTGGGTAGGCGGTTGCATGGAAGATTGGCTTCAGTAATGGGAAATAACACTTATGAATCACTTAGGGGGAATGGAGCTTTCTCCAATGGTGGAATTCAACGCGGTTCGCTTAGGCATGCACAGGAATTTAGATATAAGAAGCATCACAAGGAGAGAAGGCCGGCAAAGCAGCAGTTTCCTTGGTCCGAAATCTCAAAGAAACCATTTCCAAGGGAGAAGAGATGTGCAGGGCAGCCAACTACCTTTACAGGACCCAAGAGCCTTGCCCAGATCAGAGAAGAGAAGAGGAAAGCAGAAGAAAATGGGGGTAGCATTGGGGTACCAAAACGCGCGAGAAGAACAGTGGATTTCCAGGGTCCGAAACCCTTGAAAGAAATTCTAAAAGAGAAGGGGAAGATACCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2 zf-CCCH_3

Protein Analysis

581

Amino Acids

65.12

Weight (kDa)

7.58

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH_3 PF15663 7 - 63 1.7e-10 Zinc-finger containing family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016723)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03572
malus_domestica MD00G1107100.v1.1
prunus_persica Prupe.7G239900_v2.0.a1
pyrus_communis pycom15g15750
rosa_chinensis RchiOBHm_Chr2g0089101
rosa_laevigata RLG00000015991
rosa_multiflora Rmu_sc0005510.1_g000002
rosa_roxburghii Rroxscaffold_2G00152250
rosa_rugosa Rorug01G0487400
rosa_samantha Rh2AG042900 Rh2BG041400 Rh2CG043000 Rh2DG042000
rosa_wichuraiana Rw2G003470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 460, 505
Acc36I ACCTGC 2 cut(s) 460, 505
Acc65I GGTACC 1 cut(s) 1654
AccB1I GGYRCC 3 cut(s) 448, 493, 1654
AccB7I CCANNNNNTGG 1 cut(s) 191
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 3 cut(s) 1437, 1665, 1667
AciI CCGC 6 cut(s) 224, 664, 994, 1237, 1345, 1437
AclWI GGATC 1 cut(s) 1233
AcsI RAATTY 4 cut(s) 751, 1428, 1460, 1710
AcuI CTGAAG 3 cut(s) 375, 465, 1350
AfaI GTAC 7 cut(s) 134, 622, 669, 808, 953, 1079, 1656
AfiI CCNNNNNNNGG 4 cut(s) 187, 191, 1000, 1176
AgsI TTSAA 6 cut(s) 240, 351, 1016, 1272, 1433, 1705
AhdI GACNNNNNGTC 2 cut(s) 559, 1263
AjnI CCWGG 3 cut(s) 889, 1097, 1686
AloI GAACNNNNNNTCC 4 cut(s) 885, 917, 1148, 1180
AluBI AGCT 4 cut(s) 407, 798, 985, 1412
AluI AGCT 4 cut(s) 407, 798, 985, 1412
Alw21I GWGCWC 2 cut(s) 424, 978
Alw26I GTCTC 2 cut(s) 158, 1227
AlwI GGATC 1 cut(s) 1233
AlwNI CAGNNNCTG 1 cut(s) 362
AoxI GGCC 2 cut(s) 1319, 1493
ApeKI GCWGC 6 cut(s) 285, 404, 407, 661, 1504, 1567
ApoI RAATTY 4 cut(s) 751, 1428, 1460, 1710
Asp718I GGTACC 1 cut(s) 1654
AspLEI GCGC 3 cut(s) 385, 568, 1667
AspS9I GGNCC 5 cut(s) 1121, 1320, 1518, 1586, 1691
AsuHPI GGTGA 4 cut(s) 28, 305, 746, 1220
AvaII GGWCC 4 cut(s) 1121, 1518, 1586, 1691
BanI GGYRCC 3 cut(s) 448, 493, 1654
BbsI GAAGAC 1 cut(s) 210
Bbv12I GWGCWC 2 cut(s) 424, 978
BbvI GCAGC 6 cut(s) 297, 394, 416, 673, 1516, 1579
BccI CCATC 5 cut(s) 185, 217, 905, 1199, 1256
BcgI CGANNNNNNTGC 6 cut(s) 389, 423, 452, 486, 497, 531
BciT130I CCWGG 3 cut(s) 891, 1099, 1688
BciVI GTATCC 1 cut(s) 1087
BclI TGATCA 1 cut(s) 943
BcoDI GTCTC 2 cut(s) 158, 1227
BfaI CTAG 2 cut(s) 1053, 1741
BfmI CTRYAG 5 cut(s) 283, 408, 453, 498, 543
BfoI RGCGCY 1 cut(s) 569
BfuAI ACCTGC 2 cut(s) 460, 505
BfuI GTATCC 1 cut(s) 1087
BglI GCCNNNNNGGC 1 cut(s) 608
BisI GCNGC 6 cut(s) 286, 405, 408, 662, 1505, 1568
BlsI GCNGC 6 cut(s) 287, 406, 409, 663, 1506, 1569
BmcAI AGTACT 1 cut(s) 953
Bme1390I CCNGG 3 cut(s) 891, 1099, 1688
Bme18I GGWCC 4 cut(s) 1121, 1518, 1586, 1691
BmeRI GACNNNNNGTC 2 cut(s) 559, 1263
BmgT120I GGNCC 5 cut(s) 1121, 1320, 1518, 1586, 1691
BmiI GGNNCC 7 cut(s) 450, 495, 1122, 1322, 1588, 1656, 1692
BmrFI CCNGG 3 cut(s) 891, 1099, 1688
BmrI ACTGGG 1 cut(s) 1346
BmsI GCATC 5 cut(s) 341, 441, 548, 1039, 1486
BmuI ACTGGG 1 cut(s) 1346
BpiI GAAGAC 1 cut(s) 210
BpmI CTGGAG 2 cut(s) 738, 1153
Bpu10I CCTNAGC 1 cut(s) 1445
BsaI GGTCTC 1 cut(s) 1227
BsaJI CCNNGG 6 cut(s) 534, 889, 1190, 1514, 1544, 1687
BsaXI ACNNNNNCTCC 5 cut(s) 26, 254, 284, 1136, 1166
Bsc4I CCNNNNNNNGG 4 cut(s) 187, 191, 1000, 1176
Bse118I RCCGGY 1 cut(s) 1495
Bse1I ACTGG 3 cut(s) 140, 249, 1341
BseBI CCWGG 3 cut(s) 891, 1099, 1688
BseDI CCNNGG 6 cut(s) 534, 889, 1190, 1514, 1544, 1687
BseGI GGATG 2 cut(s) 196, 850
BseLI CCNNNNNNNGG 4 cut(s) 187, 191, 1000, 1176
BseMII CTCAG 3 cut(s) 450, 716, 1232
BseNI ACTGG 3 cut(s) 140, 249, 1341
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 6 cut(s) 297, 394, 416, 673, 1516, 1579
BseYI CCCAGC 2 cut(s) 143, 876
BsgI GTGCAG 1 cut(s) 1581
Bsh1236I CGCG 3 cut(s) 1437, 1665, 1667
BshFI GGCC 2 cut(s) 1321, 1495
BshNI GGYRCC 3 cut(s) 448, 493, 1654
BsiHKAI GWGCWC 2 cut(s) 424, 978
BsiSI CCGG 1 cut(s) 1496
BslFI GGGAC 1 cut(s) 1134
BslI CCNNNNNNNGG 4 cut(s) 187, 191, 1000, 1176
BsmAI GTCTC 2 cut(s) 158, 1227
BsmFI GGGAC 1 cut(s) 1134
BsmI GAATGC 1 cut(s) 131
BsnI GGCC 2 cut(s) 1321, 1495
Bso31I GGTCTC 1 cut(s) 1227
Bsp1286I GDGCHC 2 cut(s) 424, 978
Bsp1407I TGTACA 1 cut(s) 1077
Bsp143I GATC 4 cut(s) 829, 943, 1225, 1605
BspACI CCGC 6 cut(s) 224, 664, 994, 1237, 1345, 1437
BspANI GGCC 2 cut(s) 1321, 1495
BspCNI CTCAG 3 cut(s) 449, 715, 1233
BspFNI CGCG 3 cut(s) 1437, 1665, 1667
BspLI GGNNCC 7 cut(s) 450, 495, 1122, 1322, 1588, 1656, 1692
BspMAI CTGCAG 4 cut(s) 287, 412, 457, 502
BspMI ACCTGC 2 cut(s) 460, 505
BspPI GGATC 1 cut(s) 1233
BspT107I GGYRCC 3 cut(s) 448, 493, 1654
BspTNI GGTCTC 1 cut(s) 1227
BsrFI RCCGGY 1 cut(s) 1495
BsrGI TGTACA 1 cut(s) 1077
BsrI ACTGG 3 cut(s) 140, 249, 1341
BssAI RCCGGY 1 cut(s) 1495
BssECI CCNNGG 6 cut(s) 534, 889, 1190, 1514, 1544, 1687
BssMI GATC 4 cut(s) 829, 943, 1225, 1605
BssT1I CCWWGG 4 cut(s) 534, 1190, 1514, 1544
Bst2UI CCWGG 3 cut(s) 891, 1099, 1688
Bst4CI ACNGT 3 cut(s) 1088, 1200, 1678
Bst6I CTCTTC 7 cut(s) 3, 14, 720, 1246, 1547, 1608, 1613
BstAUI TGTACA 1 cut(s) 1077
BstC8I GCNNGC 5 cut(s) 430, 475, 1319, 1452, 1497
BstDEI CTNAG 6 cut(s) 436, 647, 702, 1241, 1397, 1445
BstF5I GGATG 2 cut(s) 196, 850
BstFNI CGCG 3 cut(s) 1437, 1665, 1667
BstH2I RGCGCY 1 cut(s) 569
BstHHI GCGC 3 cut(s) 385, 568, 1667
BstKTI GATC 4 cut(s) 832, 946, 1228, 1608
BstMAI GTCTC 2 cut(s) 158, 1227
BstMBI GATC 4 cut(s) 829, 943, 1225, 1605
BstMWI GCNNNNNNNGC 5 cut(s) 285, 608, 982, 1002, 1501
BstNI CCWGG 3 cut(s) 891, 1099, 1688
BstNSI RCATGY 3 cut(s) 66, 369, 1454
BstSCI CCNGG 3 cut(s) 889, 1097, 1686
BstSFI CTRYAG 5 cut(s) 283, 408, 453, 498, 543
BstUI CGCG 3 cut(s) 1437, 1665, 1667
BstV1I GCAGC 6 cut(s) 297, 394, 416, 673, 1516, 1579
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 1 cut(s) 1225
BstXI CCANNNNNNTGG 1 cut(s) 1331
BstYI RGATCY 1 cut(s) 1225
BsuI GTATCC 1 cut(s) 1087
BsuRI GGCC 2 cut(s) 1321, 1495
BtsCI GGATG 2 cut(s) 196, 850
BtsIMutI CAGTG 2 cut(s) 256, 1683
BveI ACCTGC 2 cut(s) 460, 505
Cac8I GCNNGC 5 cut(s) 430, 475, 1319, 1452, 1497
CaiI CAGNNNCTG 1 cut(s) 362
CfoI GCGC 3 cut(s) 385, 568, 1667
Cfr10I RCCGGY 1 cut(s) 1495
Cfr13I GGNCC 5 cut(s) 1121, 1320, 1518, 1586, 1691
CseI GACGC 1 cut(s) 25
Csp6I GTAC 7 cut(s) 133, 621, 668, 807, 952, 1078, 1655
CviAII CATG 9 cut(s) 63, 197, 314, 366, 822, 1064, 1331, 1352, 1451
CviQI GTAC 7 cut(s) 133, 621, 668, 807, 952, 1078, 1655
DdeI CTNAG 6 cut(s) 436, 647, 702, 1241, 1397, 1445
DpnI GATC 4 cut(s) 831, 945, 1227, 1607
DpnII GATC 4 cut(s) 829, 943, 1225, 1605
DriI GACNNNNNGTC 2 cut(s) 559, 1263
Eam1104I CTCTTC 7 cut(s) 3, 14, 720, 1246, 1547, 1608, 1613
Eam1105I GACNNNNNGTC 2 cut(s) 559, 1263
EarI CTCTTC 7 cut(s) 3, 14, 720, 1246, 1547, 1608, 1613
Eco130I CCWWGG 4 cut(s) 534, 1190, 1514, 1544
Eco31I GGTCTC 1 cut(s) 1227
Eco47I GGWCC 4 cut(s) 1121, 1518, 1586, 1691
Eco57I CTGAAG 3 cut(s) 375, 465, 1350
EcoO109I RGGNCCY 2 cut(s) 1320, 1586
EcoRI GAATTC 2 cut(s) 751, 1428
EcoRII CCWGG 3 cut(s) 889, 1097, 1686
EcoT14I CCWWGG 4 cut(s) 534, 1190, 1514, 1544
ErhI CCWWGG 4 cut(s) 534, 1190, 1514, 1544
FaeI CATG 9 cut(s) 66, 200, 317, 369, 825, 1067, 1334, 1355, 1454
FalI AAGNNNNNCTT 4 cut(s) 630, 662, 1348, 1380
FaqI GGGAC 1 cut(s) 1134
FatI CATG 9 cut(s) 62, 196, 313, 365, 821, 1063, 1330, 1351, 1450
FauI CCCGC 2 cut(s) 231, 657
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 1 cut(s) 1134
Fnu4HI GCNGC 6 cut(s) 286, 405, 408, 662, 1505, 1568
FokI GGATG 2 cut(s) 203, 857
Fsp4HI GCNGC 6 cut(s) 286, 405, 408, 662, 1505, 1568
FspBI CTAG 2 cut(s) 1053, 1741
GlaI GCGC 3 cut(s) 384, 567, 1666
GluI GCNGC 6 cut(s) 286, 405, 408, 662, 1505, 1568
GsaI CCCAGC 2 cut(s) 147, 880
GsuI CTGGAG 2 cut(s) 738, 1153
HaeII RGCGCY 1 cut(s) 569
HaeIII GGCC 2 cut(s) 1321, 1495
HapII CCGG 1 cut(s) 1496
HgaI GACGC 1 cut(s) 25
HhaI GCGC 3 cut(s) 385, 568, 1667
Hin1II CATG 9 cut(s) 66, 200, 317, 369, 825, 1067, 1334, 1355, 1454
Hin6I GCGC 3 cut(s) 383, 566, 1665
HinP1I GCGC 3 cut(s) 383, 566, 1665
HinfI GANTC 9 cut(s) 215, 573, 627, 643, 779, 881, 1157, 1298, 1391
HpaII CCGG 1 cut(s) 1496
HphI GGTGA 4 cut(s) 28, 305, 746, 1220
Hpy166II GTNNAC 1 cut(s) 1135
Hpy188III TCNNGA 8 cut(s) 717, 788, 947, 1022, 1037, 1046, 1091, 1287
Hpy8I GTNNAC 1 cut(s) 1135
HpyCH4III ACNGT 3 cut(s) 1088, 1200, 1678
HpyCH4IV ACGT 1 cut(s) 713
HpyF10VI GCNNNNNNNGC 5 cut(s) 285, 608, 982, 1002, 1501
HpyF3I CTNAG 6 cut(s) 436, 647, 702, 1241, 1397, 1445
HpySE526I ACGT 1 cut(s) 713
Hsp92II CATG 9 cut(s) 66, 200, 317, 369, 825, 1067, 1334, 1355, 1454
HspAI GCGC 3 cut(s) 383, 566, 1665
KpnI GGTACC 1 cut(s) 1658
KroI GCCGGC 1 cut(s) 1495
KroNI GCCGGC 1 cut(s) 1497
Ksp22I TGATCA 1 cut(s) 943
Kzo9I GATC 4 cut(s) 829, 943, 1225, 1605
LmnI GCTCC 4 cut(s) 419, 973, 982, 1409
Lsp1109I GCAGC 6 cut(s) 297, 394, 416, 673, 1516, 1579
LweI GCATC 5 cut(s) 341, 441, 548, 1039, 1486
MaeI CTAG 2 cut(s) 1053, 1741
MaeII ACGT 1 cut(s) 713
MaeIII GTNAC 6 cut(s) 232, 260, 326, 935, 1208, 1255
MalI GATC 4 cut(s) 831, 945, 1227, 1607
MboI GATC 4 cut(s) 829, 943, 1225, 1605
MflI RGATCY 1 cut(s) 1225
MhlI GDGCHC 2 cut(s) 424, 978
MlyI GAGTC 2 cut(s) 224, 773
MmeI TCCRAC 2 cut(s) 983, 1134
MroNI GCCGGC 1 cut(s) 1495
MseI TTAA 1 cut(s) 522
MspA1I CMGCKG 2 cut(s) 407, 664
MspI CCGG 1 cut(s) 1496
MspR9I CCNGG 3 cut(s) 891, 1099, 1688
Mva1269I GAATGC 1 cut(s) 131
MvaI CCWGG 3 cut(s) 891, 1099, 1688
MvnI CGCG 3 cut(s) 1437, 1665, 1667
MwoI GCNNNNNNNGC 5 cut(s) 285, 608, 982, 1002, 1501
NaeI GCCGGC 1 cut(s) 1497
NdeI CATATG 1 cut(s) 1185
NdeII GATC 4 cut(s) 829, 943, 1225, 1605
NgoMIV GCCGGC 1 cut(s) 1495
NlaIII CATG 9 cut(s) 66, 200, 317, 369, 825, 1067, 1334, 1355, 1454
NlaIV GGNNCC 7 cut(s) 450, 495, 1122, 1322, 1588, 1656, 1692
NmuCI GTSAC 4 cut(s) 232, 935, 1208, 1255
NspI RCATGY 3 cut(s) 66, 369, 1454
PaeI GCATGC 1 cut(s) 1454
PaqCI CACCTGC 2 cut(s) 460, 505
PcsI WCGNNNNNNNCGW 1 cut(s) 1209
PctI GAATGC 1 cut(s) 131
PdiI GCCGGC 1 cut(s) 1497
PfeI GAWTC 7 cut(s) 573, 627, 643, 881, 1157, 1298, 1391
PflMI CCANNNNNTGG 1 cut(s) 191
PkrI GCNGC 6 cut(s) 287, 406, 409, 663, 1506, 1569
PleI GAGTC 2 cut(s) 223, 773
PpsI GAGTC 2 cut(s) 223, 773
PpuMI RGGWCCY 1 cut(s) 1586
Psp5II RGGWCCY 1 cut(s) 1586
Psp6I CCWGG 3 cut(s) 889, 1097, 1686
PspFI CCCAGC 2 cut(s) 143, 876
PspGI CCWGG 3 cut(s) 889, 1097, 1686
PspN4I GGNNCC 7 cut(s) 450, 495, 1122, 1322, 1588, 1656, 1692
PspPI GGNCC 5 cut(s) 1121, 1320, 1518, 1586, 1691
PspPPI RGGWCCY 1 cut(s) 1586
PstI CTGCAG 4 cut(s) 287, 412, 457, 502
PstNI CAGNNNCTG 1 cut(s) 362
PsuI RGATCY 1 cut(s) 1225
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 7 cut(s) 134, 622, 669, 808, 953, 1079, 1656
RsaNI GTAC 7 cut(s) 133, 621, 668, 807, 952, 1078, 1655
SaqAI TTAA 1 cut(s) 522
SatI GCNGC 6 cut(s) 286, 405, 408, 662, 1505, 1568
Sau3AI GATC 4 cut(s) 829, 943, 1225, 1605
Sau96I GGNCC 5 cut(s) 1121, 1320, 1518, 1586, 1691
SbfI CCTGCAGG 2 cut(s) 457, 502
ScaI AGTACT 1 cut(s) 953
SchI GAGTC 2 cut(s) 224, 773
ScrFI CCNGG 3 cut(s) 891, 1099, 1688
SdaI CCTGCAGG 2 cut(s) 457, 502
SduI GDGCHC 2 cut(s) 424, 978
SfaNI GCATC 5 cut(s) 341, 441, 548, 1039, 1486
SfcI CTRYAG 5 cut(s) 283, 408, 453, 498, 543
SinI GGWCC 4 cut(s) 1121, 1518, 1586, 1691
SphI GCATGC 1 cut(s) 1454
Sse8387I CCTGCAGG 2 cut(s) 457, 502
SsiI CCGC 6 cut(s) 224, 664, 994, 1237, 1345, 1437
SspMI CTAG 2 cut(s) 1053, 1741
StyD4I CCNGG 3 cut(s) 889, 1097, 1686
StyI CCWWGG 4 cut(s) 534, 1190, 1514, 1544
TaaI ACNGT 3 cut(s) 1088, 1200, 1678
TaiI ACGT 1 cut(s) 716
TaqI TCGA 5 cut(s) 91, 175, 605, 1160, 1203
TatI WGTACW 2 cut(s) 951, 1077
TfiI GAWTC 7 cut(s) 573, 627, 643, 881, 1157, 1298, 1391
Tru1I TTAA 1 cut(s) 522
Tru9I TTAA 1 cut(s) 522
TscAI CASTG 2 cut(s) 256, 1683
TseFI GTSAC 4 cut(s) 232, 935, 1208, 1255
TseI GCWGC 6 cut(s) 285, 404, 407, 661, 1504, 1567
Tsp45I GTSAC 4 cut(s) 232, 935, 1208, 1255
TspDTI ATGAA 5 cut(s) 387, 738, 810, 861, 1404
TspRI CASTG 2 cut(s) 256, 1683
Van91I CCANNNNNTGG 1 cut(s) 191
VpaK11BI GGWCC 4 cut(s) 1121, 1518, 1586, 1691
XapI RAATTY 4 cut(s) 751, 1428, 1460, 1710
XceI RCATGY 3 cut(s) 66, 369, 1454
XcmI CCANNNNNNNNNTGG 1 cut(s) 873
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 2 cut(s) 1053, 1741
ZrmI AGTACT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.