FvH4_1g12391

MORC family CW-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0014987
Physical Location & Seq
Forward (+)
6791666 .. 6797613
5948 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12391.t1

Sequence Viewer

Length: 1770 bp
ATGTCGACCCAGAAACCGAAGCCAGATCCAGCCGCTGTGGTGGAGCTCGACAGCAGCGACGACGAGAACCCAGCTGCGACGCCGAACACTACTCAGAAAGTCCCGCCGCAACACTCGCCGGCCGTCGGGCAGCAAACCCTAGCCTGCCGGAGCTTCTGGAAAGCCGGCGACTATGTTGTGCCCAAGCAGCAGTTTCTGGCCCAAGACCAATTGGAGCACGCGCGCGTGCATCCCAAGTTTCTTCATTCCAATGCCACCTCGCATAAGTGGGCTTTTGGAGCCATTGCTGAGCTGTTGGACAATGGTGTTGATGAGATACAAAATGGGGCAACTTTTGTGAGTGTTGATAAGGTTGAACTGAAGAAAGACAACTCTCCGGCGTTACTTTTCCGAGATGATGGGGCTGGGATGAATCCGGAAGGTCTGCGCAAATGCATGAGCTTGGGTTATTCTACAAAGAAGTCGAACACGACTATCGGGCAATATGGTAATGGATTCAAGACAAGTACTATGAGACTAGGTGCTGATGCTATCGTTTTCAGTCGTGCAACTCGTGGAAGCAAAGCTACCCAGAGTATTGGATTGTTATCTTATACGTTCCTACGGAGAACTGGGCAGGATGATGTTATTGTTCCAATGATTGATTTTGACATCTCTGGAAATTGGGTTGAACCAATAATTTATAGCTCACTGGATGACTGGTCTTCTAATTTGAAAACAATCCTTAAATGGTCGCCCTTTGGTTCAAAGGAAGATCTCTTGCAACAGTTTGAGGACATTGGAGCTCATGGAACAAAAATAATCATATACAACTTGTGGCTAAATGATGAAGGCATATATGAATTGAGTTTTGATGATGATGATGAGGATATACGGTTGAGAGATGAAACTAACCATGGAAGTTTGACCAAGTCAAAGAAAAAAACAGCTGGCTTACTAAACCATGTGTCATATCGTCTACGCTATTCGTTGAGGGCATATGCTTCCATTCTGTACCTCAGAAAATTCACAAACTTCCAAGTCATTATAAGGGGGAAACCTGTACAGCAATATAATATTCAAGATGACTTGATACATGCAAAAGTGATTACATATAGGCCTCAGCTAGCTACCATGTCAAAAGAGGTCCTAGTTGAAACAACCATTGGATTTGCAAAAGAGGCACCTGATCTTCCAGTTAGTGGGTTCAACGTGTACCACAAAAATCGCCTCATCAGGCCGTTCTGGAAAGTCACCGCTGATGGTTCATCGAAGGGGAATGGTGTTATTGGAATTCTTGAAGCAAACTTTATAGAGCCAGCACATGATAAGCAGGACTTTGAGCGATCATCATTGTTTATCCGTCTCGAAACAAGGCTGAAACAAATGGTAATGGAATATTGGAAAGGCCATTGTCACTTTGTGGGCTACCAGCCTCTTATTCCTAGTGAACTCAAGCTGCACAGGGAACAACGTCCTGCTAAATCTTCTGGTGGACCAACACGTATTGATGTTGATATGAGTGATGCGCAGCATAGTCCAGAAGAAGTAGTGATCTCTGATGGCAATACAGATGGCATGTCAGTTGAGGAGATATGTGAGGAAAATATACAACTCTTCTTGAGGTATGAGGAACATGTGAAGAAGGAGGATCAGTTGAAACAGACGATTAACAACCTGGAGAAGGAACTAGAGTTCGCTAAAAGGAAGAAGGATCAACTTGCTGCATATCTAGAGATGCAGAGGAAGCAAAAGGCAGCGGACCATGGTAGTGCCGACACCAAAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002230 GO:0002252 GO:0002376 GO:0002682 GO:0002684 GO:0002697 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009615 GO:0009626 GO:0009889 GO:0009987 GO:0010112 GO:0010363 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0012501 GO:0012505 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031410 GO:0031935 GO:0031982 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0033554 GO:0034050 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050688 GO:0050691 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:0097708 GO:0098542 GO:1900424 GO:1900426 GO:1901360 GO:1901363 GO:1901672 GO:1902275 GO:1903506 GO:2000112 GO:2001020 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HATPase_c_3

Protein Analysis

590

Amino Acids

66.43

Weight (kDa)

6.31

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 92 - 202 1.4e-14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 322 - 461 2.9e-62 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36270 AT4G36280 AT4G36290
fragaria_vesca FvH4_1g12391 FvH4_1g12391
malus_domestica MD02G1137200.v1.1
prunus_persica Prupe.7G163400_v2.0.a1
pyrus_communis pycom02g10860
rosa_chinensis RchiOBHm_Chr2g0100251
rosa_multiflora Rmu_sc0002547.1_g000014
rosa_rugosa Rorug02G0086800
rosa_samantha Rh2AG135800 Rh2BG139300 Rh2CG141100 Rh2DG141300
rosa_wichuraiana Rw2G010620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1028
Acc16I TGCGCA 2 cut(s) 428, 1509
AccB1I GGYRCC 1 cut(s) 1162
AccB7I CCANNNNNTGG 1 cut(s) 1181
AccI GTMKAC 2 cut(s) 5, 958
AccII CGCG 3 cut(s) 221, 223, 225
AccIII TCCGGA 1 cut(s) 415
AciI CCGC 5 cut(s) 33, 104, 107, 1236, 1739
AclWI GGATC 3 cut(s) 20, 1638, 1701
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 1004, 1272
AcuI CTGAAG 1 cut(s) 380
AcyI GRCGYC 1 cut(s) 80
AdeI CACNNNGTG 1 cut(s) 1402
AfaI GTAC 4 cut(s) 508, 995, 1044, 1196
AfiI CCNNNNNNNGG 3 cut(s) 125, 1181, 1663
AflIII ACRYGT 3 cut(s) 1191, 1481, 1615
AjnI CCWGG 1 cut(s) 1656
AjuI GAANNNNNNNTTGG 2 cut(s) 1128, 1160
AloI GAACNNNNNNTCC 2 cut(s) 1658, 1690
Alw21I GWGCWC 3 cut(s) 48, 219, 787
Alw26I GTCTC 2 cut(s) 508, 1349
AlwI GGATC 3 cut(s) 20, 1638, 1701
AlwNI CAGNNNCTG 2 cut(s) 35, 196
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 5 cut(s) 120, 198, 1097, 1217, 1387
ApeKI GCWGC 8 cut(s) 54, 74, 130, 187, 1438, 1510, 1703, 1736
ApoI RAATTY 2 cut(s) 1004, 1272
AspLEI GCGC 4 cut(s) 223, 225, 429, 1510
AspS9I GGNCC 4 cut(s) 199, 1126, 1475, 1741
AsuHPI GGTGA 1 cut(s) 1225
AsuNHI GCTAGC 1 cut(s) 1105
AvaII GGWCC 3 cut(s) 1126, 1475, 1741
BaeGI GKGCMC 1 cut(s) 183
BanI GGYRCC 1 cut(s) 1162
BanII GRGCYC 2 cut(s) 48, 787
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BauI CACGAG 1 cut(s) 552
BbsI GAAGAC 1 cut(s) 696
Bbv12I GWGCWC 3 cut(s) 48, 219, 787
BbvCI CCTCAGC 1 cut(s) 1101
BbvI GCAGC 8 cut(s) 61, 66, 142, 199, 1425, 1522, 1690, 1748
BccI CCATC 4 cut(s) 392, 1235, 1535, 1547
BceAI ACGGC 2 cut(s) 107, 1204
BciT130I CCWGG 1 cut(s) 1658
BcoDI GTCTC 2 cut(s) 508, 1349
BfaI CTAG 7 cut(s) 140, 518, 1106, 1130, 1425, 1670, 1712
BglII AGATCT 1 cut(s) 754
BlpI GCTNAGC 1 cut(s) 288
BmcAI AGTACT 1 cut(s) 508
Bme1390I CCNGG 1 cut(s) 1658
Bme18I GGWCC 3 cut(s) 1126, 1475, 1741
BmgT120I GGNCC 4 cut(s) 199, 1126, 1475, 1741
BmiI GGNNCC 2 cut(s) 280, 1164
BmrFI CCNGG 1 cut(s) 1658
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 4 cut(s) 238, 517, 1495, 1707
BmtI GCTAGC 1 cut(s) 1109
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 1 cut(s) 696
BpmI CTGGAG 1 cut(s) 1679
Bpu10I CCTNAGC 1 cut(s) 1101
Bpu1102I GCTNAGC 1 cut(s) 288
BpuEI CTTGAG 2 cut(s) 1418, 1621
BsaAI YACGTR 1 cut(s) 1484
BsaBI GATNNNNATC 1 cut(s) 586
BsaHI GRCGYC 1 cut(s) 80
BsaJI CCNNGG 2 cut(s) 895, 1744
BsaWI WCCGGW 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 1619, 1649
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 1181, 1663
Bse118I RCCGGY 2 cut(s) 118, 164
Bse1I ACTGG 4 cut(s) 616, 696, 704, 1175
Bse3DI GCAATG 1 cut(s) 282
Bse8I GATNNNNATC 1 cut(s) 586
BseAI TCCGGA 1 cut(s) 415
BseBI CCWGG 1 cut(s) 1658
BseDI CCNNGG 2 cut(s) 895, 1744
BseGI GGATG 4 cut(s) 229, 414, 625, 700
BseJI GATNNNNATC 1 cut(s) 586
BseLI CCNNNNNNNGG 3 cut(s) 125, 1181, 1663
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 4 cut(s) 107, 279, 1012, 1115
BseNI ACTGG 4 cut(s) 616, 696, 704, 1175
BsePI GCGCGC 1 cut(s) 221
BseRI GAGGAG 1 cut(s) 1583
BseSI GKGCMC 1 cut(s) 183
BseX3I CGGCCG 1 cut(s) 120
BseXI GCAGC 8 cut(s) 61, 66, 142, 199, 1425, 1522, 1690, 1748
BseYI CCCAGC 2 cut(s) 70, 404
BsgI GTGCAG 1 cut(s) 1424
Bsh1236I CGCG 3 cut(s) 221, 223, 225
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 5 cut(s) 122, 200, 1099, 1219, 1389
BshNI GGYRCC 1 cut(s) 1162
BsiEI CGRYCG 1 cut(s) 123
BsiHKAI GWGCWC 3 cut(s) 48, 219, 787
BsiSI CCGG 5 cut(s) 119, 148, 165, 377, 416
BslFI GGGAC 1 cut(s) 86
BslI CCNNNNNNNGG 3 cut(s) 125, 1181, 1663
BsmAI GTCTC 2 cut(s) 508, 1349
BsmBI CGTCTC 1 cut(s) 1349
BsmFI GGGAC 1 cut(s) 86
BsnI GGCC 5 cut(s) 122, 200, 1099, 1219, 1389
Bsp1286I GDGCHC 4 cut(s) 48, 183, 219, 787
Bsp13I TCCGGA 1 cut(s) 415
Bsp1407I TGTACA 1 cut(s) 1042
Bsp143I GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
Bsp1720I GCTNAGC 1 cut(s) 288
Bsp19I CCATGG 2 cut(s) 895, 1744
BspACI CCGC 5 cut(s) 33, 104, 107, 1236, 1739
BspANI GGCC 5 cut(s) 122, 200, 1099, 1219, 1389
BspCNI CTCAG 4 cut(s) 106, 280, 1011, 1114
BspEI TCCGGA 1 cut(s) 415
BspFNI CGCG 3 cut(s) 221, 223, 225
BspLI GGNNCC 2 cut(s) 280, 1164
BspOI GCTAGC 1 cut(s) 1109
BspPI GGATC 3 cut(s) 20, 1638, 1701
BspT107I GGYRCC 1 cut(s) 1162
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 2 cut(s) 118, 164
BsrGI TGTACA 1 cut(s) 1042
BsrI ACTGG 4 cut(s) 616, 696, 704, 1175
BssAI RCCGGY 2 cut(s) 118, 164
BssECI CCNNGG 2 cut(s) 895, 1744
BssHII GCGCGC 1 cut(s) 221
BssMI GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
BssNI GRCGYC 1 cut(s) 80
BssSI CACGAG 1 cut(s) 552
BssT1I CCWWGG 2 cut(s) 895, 1744
Bst2BI CACGAG 1 cut(s) 552
Bst2UI CCWGG 1 cut(s) 1658
Bst4CI ACNGT 2 cut(s) 768, 876
Bst6I CTCTTC 1 cut(s) 1601
BstACI GRCGYC 1 cut(s) 80
BstAUI TGTACA 1 cut(s) 1042
BstBAI YACGTR 1 cut(s) 1484
BstC8I GCNNGC 9 cut(s) 120, 145, 166, 219, 223, 227, 931, 1107, 1299
BstDEI CTNAG 4 cut(s) 93, 288, 998, 1101
BstDSI CCRYGG 2 cut(s) 895, 1744
BstENI CCTNNNNNAGG 1 cut(s) 1661
BstF5I GGATG 4 cut(s) 229, 414, 625, 700
BstFNI CGCG 3 cut(s) 221, 223, 225
BstHHI GCGC 4 cut(s) 223, 225, 429, 1510
BstKTI GATC 7 cut(s) 28, 757, 1171, 1328, 1536, 1633, 1696
BstMAI GTCTC 2 cut(s) 508, 1349
BstMBI GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 5 cut(s) 115, 187, 278, 1160, 1726
BstNI CCWGG 1 cut(s) 1658
BstNSI RCATGY 3 cut(s) 1079, 1561, 1619
BstSCI CCNGG 1 cut(s) 1656
BstSLI GKGCMC 1 cut(s) 183
BstUI CGCG 3 cut(s) 221, 223, 225
BstV1I GCAGC 8 cut(s) 61, 66, 142, 199, 1425, 1522, 1690, 1748
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 2 cut(s) 25, 754
BstXI CCANNNNNNTGG 1 cut(s) 578
BstYI RGATCY 2 cut(s) 25, 754
BstZI CGGCCG 1 cut(s) 120
BsuRI GGCC 5 cut(s) 122, 200, 1099, 1219, 1389
BtgI CCRYGG 2 cut(s) 895, 1744
BtsCI GGATG 4 cut(s) 229, 414, 625, 700
BtsIMutI CAGTG 1 cut(s) 689
Cac8I GCNNGC 9 cut(s) 120, 145, 166, 219, 223, 227, 931, 1107, 1299
CaiI CAGNNNCTG 2 cut(s) 35, 196
CfoI GCGC 4 cut(s) 223, 225, 429, 1510
Cfr10I RCCGGY 2 cut(s) 118, 164
Cfr13I GGNCC 4 cut(s) 199, 1126, 1475, 1741
CseI GACGC 1 cut(s) 88
Csp6I GTAC 4 cut(s) 507, 994, 1043, 1195
CviQI GTAC 4 cut(s) 507, 994, 1043, 1195
DdeI CTNAG 4 cut(s) 93, 288, 998, 1101
DpnI GATC 7 cut(s) 27, 756, 1170, 1327, 1535, 1632, 1695
DpnII GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
DraIII CACNNNGTG 1 cut(s) 1402
EaeI YGGCCR 1 cut(s) 120
EagI CGGCCG 1 cut(s) 120
Eam1104I CTCTTC 1 cut(s) 1601
EarI CTCTTC 1 cut(s) 1601
Ecl136II GAGCTC 2 cut(s) 46, 785
EclXI CGGCCG 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 895, 1744
Eco147I AGGCCT 1 cut(s) 1099
Eco24I GRGCYC 2 cut(s) 48, 787
Eco47I GGWCC 3 cut(s) 1126, 1475, 1741
Eco52I CGGCCG 1 cut(s) 120
Eco53kI GAGCTC 2 cut(s) 46, 785
Eco57I CTGAAG 1 cut(s) 380
EcoICRI GAGCTC 2 cut(s) 46, 785
EcoNI CCTNNNNNAGG 1 cut(s) 1661
EcoO109I RGGNCCY 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 1272
EcoRII CCWGG 1 cut(s) 1656
EcoT14I CCWWGG 2 cut(s) 895, 1744
EcoT22I ATGCAT 1 cut(s) 437
EcoT38I GRGCYC 2 cut(s) 48, 787
ErhI CCWWGG 2 cut(s) 895, 1744
Esp3I CGTCTC 1 cut(s) 1349
FalI AAGNNNNNCTT 2 cut(s) 1301, 1333
FaqI GGGAC 1 cut(s) 86
FauI CCCGC 1 cut(s) 111
FauNDI CATATG 1 cut(s) 979
FblI GTMKAC 2 cut(s) 5, 958
FokI GGATG 4 cut(s) 216, 421, 632, 707
FriOI GRGCYC 2 cut(s) 48, 787
FspBI CTAG 7 cut(s) 140, 518, 1106, 1130, 1425, 1670, 1712
FspI TGCGCA 2 cut(s) 428, 1509
GlaI GCGC 4 cut(s) 222, 224, 428, 1509
GsaI CCCAGC 2 cut(s) 74, 408
GsuI CTGGAG 1 cut(s) 1679
HaeIII GGCC 5 cut(s) 122, 200, 1099, 1219, 1389
HapII CCGG 5 cut(s) 119, 148, 165, 377, 416
HgaI GACGC 1 cut(s) 88
HhaI GCGC 4 cut(s) 223, 225, 429, 1510
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 4 cut(s) 221, 223, 427, 1508
HinP1I GCGC 4 cut(s) 221, 223, 427, 1508
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 2 cut(s) 412, 495
HpaII CCGG 5 cut(s) 119, 148, 165, 377, 416
HphI GGTGA 1 cut(s) 1225
Hpy166II GTNNAC 5 cut(s) 6, 959, 1195, 1430, 1475
Hpy188I TCNGA 4 cut(s) 96, 392, 1001, 1540
Hpy8I GTNNAC 5 cut(s) 6, 959, 1195, 1430, 1475
Hpy99I CGWCG 4 cut(s) 62, 65, 82, 128
HpyAV CCTTC 6 cut(s) 413, 824, 1246, 1618, 1657, 1684
HpyCH4III ACNGT 2 cut(s) 768, 876
HpyCH4IV ACGT 4 cut(s) 596, 1191, 1453, 1483
HpyCH4V TGCA 9 cut(s) 229, 435, 548, 763, 1079, 1154, 1441, 1706, 1720
HpyF10VI GCNNNNNNNGC 5 cut(s) 115, 187, 278, 1160, 1726
HpyF3I CTNAG 4 cut(s) 93, 288, 998, 1101
HpySE526I ACGT 4 cut(s) 596, 1191, 1453, 1483
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 4 cut(s) 221, 223, 427, 1508
Kpn2I TCCGGA 1 cut(s) 415
KroI GCCGGC 2 cut(s) 118, 164
KroNI GCCGGC 2 cut(s) 120, 166
Kzo9I GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
LmnI GCTCC 5 cut(s) 43, 150, 214, 278, 782
Lsp1109I GCAGC 8 cut(s) 61, 66, 142, 199, 1425, 1522, 1690, 1748
LweI GCATC 4 cut(s) 238, 517, 1495, 1707
MaeI CTAG 7 cut(s) 140, 518, 1106, 1130, 1425, 1670, 1712
MaeII ACGT 4 cut(s) 596, 1191, 1453, 1483
MaeIII GTNAC 3 cut(s) 381, 1231, 1394
MalI GATC 7 cut(s) 27, 756, 1170, 1327, 1535, 1632, 1695
MauBI CGCGCGCG 1 cut(s) 221
MboI GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
MfeI CAATTG 1 cut(s) 209
MflI RGATCY 2 cut(s) 25, 754
MhlI GDGCHC 4 cut(s) 48, 183, 219, 787
MluCI AATT 7 cut(s) 209, 661, 678, 709, 842, 1004, 1272
MmeI TCCRAC 1 cut(s) 276
Mph1103I ATGCAT 1 cut(s) 437
MroI TCCGGA 1 cut(s) 415
MroNI GCCGGC 2 cut(s) 118, 164
MseI TTAA 2 cut(s) 726, 1650
MslI CAYNNNNRTG 2 cut(s) 249, 1749
MspA1I CMGCKG 5 cut(s) 35, 74, 929, 1238, 1739
MspI CCGG 5 cut(s) 119, 148, 165, 377, 416
MspR9I CCNGG 1 cut(s) 1658
MunI CAATTG 1 cut(s) 209
MvaI CCWGG 1 cut(s) 1658
MvnI CGCG 3 cut(s) 221, 223, 225
MwoI GCNNNNNNNGC 5 cut(s) 115, 187, 278, 1160, 1726
NaeI GCCGGC 2 cut(s) 120, 166
NcoI CCATGG 2 cut(s) 895, 1744
NdeI CATATG 1 cut(s) 979
NdeII GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
NgoMIV GCCGGC 2 cut(s) 118, 164
NheI GCTAGC 1 cut(s) 1105
NlaIV GGNNCC 2 cut(s) 280, 1164
NmuCI GTSAC 2 cut(s) 1231, 1394
NsbI TGCGCA 2 cut(s) 428, 1509
NsiI ATGCAT 1 cut(s) 437
NspI RCATGY 3 cut(s) 1079, 1561, 1619
PauI GCGCGC 1 cut(s) 221
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 1 cut(s) 1615
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 550
PdiI GCCGGC 2 cut(s) 120, 166
PfeI GAWTC 2 cut(s) 412, 495
PflFI GACNNNGTC 1 cut(s) 910
PflMI CCANNNNNTGG 1 cut(s) 1181
Ppu21I YACGTR 1 cut(s) 1484
PpuMI RGGWCCY 1 cut(s) 1126
PscI ACATGT 1 cut(s) 1615
PsiI TTATAA 1 cut(s) 1028
Psp124BI GAGCTC 2 cut(s) 48, 787
Psp5II RGGWCCY 1 cut(s) 1126
Psp6I CCWGG 1 cut(s) 1656
PspFI CCCAGC 2 cut(s) 70, 404
PspGI CCWGG 1 cut(s) 1656
PspN4I GGNNCC 2 cut(s) 280, 1164
PspPI GGNCC 4 cut(s) 199, 1126, 1475, 1741
PspPPI RGGWCCY 1 cut(s) 1126
PstNI CAGNNNCTG 2 cut(s) 35, 196
PsuI RGATCY 2 cut(s) 25, 754
PsyI GACNNNGTC 1 cut(s) 910
PteI GCGCGC 1 cut(s) 221
PvuII CAGCTG 2 cut(s) 74, 929
RsaI GTAC 4 cut(s) 508, 995, 1044, 1196
RsaNI GTAC 4 cut(s) 507, 994, 1043, 1195
RseI CAYNNNNRTG 2 cut(s) 249, 1749
SacI GAGCTC 2 cut(s) 48, 787
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 726, 1650
Sau3AI GATC 7 cut(s) 25, 754, 1168, 1325, 1533, 1630, 1693
Sau96I GGNCC 4 cut(s) 199, 1126, 1475, 1741
ScaI AGTACT 1 cut(s) 508
ScrFI CCNGG 1 cut(s) 1658
SduI GDGCHC 4 cut(s) 48, 183, 219, 787
SfaNI GCATC 4 cut(s) 238, 517, 1495, 1707
SinI GGWCC 3 cut(s) 1126, 1475, 1741
SmiMI CAYNNNNRTG 2 cut(s) 249, 1749
SmlI CTYRAG 2 cut(s) 1433, 1600
SmoI CTYRAG 2 cut(s) 1433, 1600
Sse9I AATT 7 cut(s) 209, 661, 678, 709, 842, 1004, 1272
SseBI AGGCCT 1 cut(s) 1099
SsiI CCGC 5 cut(s) 33, 104, 107, 1236, 1739
SspI AATATT 2 cut(s) 1057, 1379
SspMI CTAG 7 cut(s) 140, 518, 1106, 1130, 1425, 1670, 1712
SstI GAGCTC 2 cut(s) 48, 787
StuI AGGCCT 1 cut(s) 1099
StyD4I CCNGG 1 cut(s) 1656
StyI CCWWGG 2 cut(s) 895, 1744
TaaI ACNGT 2 cut(s) 768, 876
TaiI ACGT 4 cut(s) 599, 1194, 1456, 1486
TaqI TCGA 5 cut(s) 5, 48, 464, 1250, 1347
TasI AATT 7 cut(s) 209, 661, 678, 709, 842, 1004, 1272
TatI WGTACW 2 cut(s) 506, 1042
TauI GCSGC 2 cut(s) 35, 109
TfiI GAWTC 2 cut(s) 412, 495
Tru1I TTAA 2 cut(s) 726, 1650
Tru9I TTAA 2 cut(s) 726, 1650
TscAI CASTG 1 cut(s) 696
TseFI GTSAC 2 cut(s) 1231, 1394
TseI GCWGC 8 cut(s) 54, 74, 130, 187, 1438, 1510, 1703, 1736
Tsp45I GTSAC 2 cut(s) 1231, 1394
TspDTI ATGAA 6 cut(s) 233, 425, 843, 855, 900, 1236
TspGWI ACGGA 2 cut(s) 619, 1331
TspRI CASTG 1 cut(s) 696
Tth111I GACNNNGTC 1 cut(s) 910
Van91I CCANNNNNTGG 1 cut(s) 1181
VpaK11BI GGWCC 3 cut(s) 1126, 1475, 1741
XagI CCTNNNNNAGG 1 cut(s) 1661
XapI RAATTY 2 cut(s) 1004, 1272
XbaI TCTAGA 1 cut(s) 1711
XceI RCATGY 3 cut(s) 1079, 1561, 1619
XmiI GTMKAC 2 cut(s) 5, 958
XspI CTAG 7 cut(s) 140, 518, 1106, 1130, 1425, 1670, 1712
ZrmI AGTACT 1 cut(s) 508
Zsp2I ATGCAT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.