RchiOBHm_Chr2g0100251

MORC family CW-type zinc finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0014987
Physical Location & Seq
Forward (+)
12227189 .. 12233638
6450 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ47490

Sequence Viewer

Length: 1767 bp
ATGTCGACCCAGAAATCGAAGGGAGCTCCCGCCGCTCCGGTAGAGCTCGACAGCAGCGACGACGAGAACGCCGCCGCGACGCCGAACATCACGAAGAAAATTCCGCCGGCGGAGCCCGTCGGGCAGCAAACCCTAACCTCACGTAGCTTCTGGAAAGCCGGCGACTATGTTGTGGGCCCCTCCAAGCGGCCGTCTCTGGCGAAAGGGCAATTGGAACACGCGCGAGTCCATCCCAAGTTTCTTCATTCCAATGCTACTTCGCATAAGTGGGCTTTTGGAGCCATTGCTGAGCTGTTGGACAATGGTGTTGATGAGATACAAAATGGGGCAACTTTTGTCAGTGTGGATAAGATTGATCTCAAGAAAGACAACTCTCCGGCATTACTTTTCCGAGATGATGGGGGTGGGATGAATCCGGAAGGTCTCCGCAAATGCATGAGCTTGGGTTATTCTACAAAGAAGTCAAACACAACCATCGGGCAATATGGTAATGGATTCAAGACAAGTACTATGAGACTAGGTGCTGATGCCATCGTTTTCAGTTGTGCAACTCATGGAAGCAAAGCTACCCAGAGTATTGGACTTTTATCTTATACGTTCCTACGGAGAACTGGGCAGGATGATGTTATTGTTCCAATGATTGATTTTGACATCTCTGGAAATTGGGTTCAACCAATAATTTATAGCTCACAGGATGACTGGTCTTCTAATTTGAAAACAATCCTTGAATGGTCACCCTTTGGATCAAAGGAAGATCTCTTGCAACAGTTTGAGGACATTGGAGCTCATGGAACAAAAATAATCATATACAACTTGTGGCTAAATGATGAAGGCGTATATGAATTGAGTTTTGATGATGATGATGAGGATATACGGTTGAGAGATGAAGCTAACCATGGGAATTTGACCAAGTTAAACAAAAAAACAGTTGACCTACAAAACCATGTGTCATATCGTCTCCGCTATTCATTGAGGGCATATGCTTCCATTCTGTACCTCAGAAAATTCACAAACTTCCAAGTCATTATAAGGGGAAAATCTGTACAGCAATATGATATTCAAGATGACTTGATACATGTAAAAGTGATAACATATAGGCCTCAGCTAGCTACCATGTCAAAAGAGGTTTCAGTGGAAACAACCATTGGATTCGCAAAAGAGGCACCTGATCTTGCAGTTAGTGGATTCAATGTGTACCATAAAAATCGCCTCATCAGGCCCTTCTGGAAGGTCACCGCTGATGGTTCATCGAAAGGGAATGGTGTTATTGGAATTCTTGAAGCAAACTTTATAGAGCCAGCACATGATAAGCAGGACTTTGAGAGATCGTCATTGTTTATCCGTCTCGAAACTAGGCTGAAACAAATGGTAATGGATTATTGGAAATGCCATTGTCACTTTGTGGGCTATCAACCTCTTATTCCTAGTGAGCTTAAGCTGCACAGGGAACGTGCTGTTAAATCTTCTGGGGGACCAACACCTATTGATGTCGATACGAGTGATGGGCAGCATAGTCCACAAGAAGTAGTGATGTCTGATGGCAATACAGAGGGCATGTCAGTTGAGGAGATATGTGAGGAAAATATACAACTCTTCATGAGGTATGAGGAACATGTGAAGAAGGAGGATGAGTTGAAGCAGACGATTAACAACCTAAAGAAGGAGCTAGAGTTTGCCAAAAGGAAGAAGGATCAACTTGCAGCATATCTAGAGATCAAGAGGAAGCAAAAGGCAACGCAGCATCGTAGTGCCCAGACCAATGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002230 GO:0002252 GO:0002376 GO:0002682 GO:0002684 GO:0002697 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0006139 GO:0006282 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008219 GO:0009605 GO:0009607 GO:0009615 GO:0009626 GO:0009889 GO:0009987 GO:0010112 GO:0010363 GO:0010468 GO:0010556 GO:0010941 GO:0010942 GO:0012501 GO:0012505 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0031410 GO:0031935 GO:0031982 GO:0032101 GO:0032103 GO:0033043 GO:0033044 GO:0033554 GO:0034050 GO:0034052 GO:0034641 GO:0043067 GO:0043068 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050688 GO:0050691 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051252 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:0097708 GO:0098542 GO:1900424 GO:1900426 GO:1901360 GO:1901363 GO:1901672 GO:1902275 GO:1903506 GO:2000112 GO:2001020 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HATPase_c_3

Protein Analysis

588

Amino Acids

66.12

Weight (kDa)

6.52

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 92 - 205 8.7e-14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 322 - 461 2.5e-62 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36270 AT4G36280 AT4G36290
fragaria_vesca FvH4_1g12391 FvH4_1g12391
malus_domestica MD02G1137200.v1.1
prunus_persica Prupe.7G163400_v2.0.a1
pyrus_communis pycom02g10860
rosa_chinensis RchiOBHm_Chr2g0100251
rosa_multiflora Rmu_sc0002547.1_g000014
rosa_rugosa Rorug02G0086800
rosa_samantha Rh2AG135800 Rh2BG139300 Rh2CG141100 Rh2DG141300
rosa_wichuraiana Rw2G010620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1028
AccB1I GGYRCC 1 cut(s) 1162
AccBSI CCGCTC 1 cut(s) 35
AccI GTMKAC 1 cut(s) 5
AccII CGCG 3 cut(s) 77, 221, 223
AccIII TCCGGA 1 cut(s) 415
AclWI GGATC 2 cut(s) 751, 1698
AcoI YGGCCR 1 cut(s) 188
AcsI RAATTY 4 cut(s) 99, 901, 1004, 1272
AcyI GRCGYC 1 cut(s) 80
AdeI CACNNNGTG 1 cut(s) 1402
AfaI GTAC 4 cut(s) 508, 995, 1044, 1196
AfiI CCNNNNNNNGG 2 cut(s) 186, 1660
AflII CTTAAG 1 cut(s) 1433
AflIII ACRYGT 2 cut(s) 1075, 1612
AgsI TTSAA 8 cut(s) 499, 671, 715, 728, 1061, 1189, 1280, 1636
AjuI GAANNNNNNNTTGG 4 cut(s) 194, 226, 1128, 1160
AloI GAACNNNNNNTCC 2 cut(s) 651, 683
Alw21I GWGCWC 3 cut(s) 28, 48, 787
Alw26I GTCTC 5 cut(s) 198, 428, 508, 962, 1349
AlwI GGATC 2 cut(s) 751, 1698
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 4 cut(s) 175, 188, 1097, 1217
ApaI GGGCCC 1 cut(s) 179
ApeKI GCWGC 6 cut(s) 54, 124, 1438, 1507, 1700, 1738
ApoI RAATTY 4 cut(s) 99, 901, 1004, 1272
AspLEI GCGC 1 cut(s) 223
AspS9I GGNCC 4 cut(s) 175, 176, 1218, 1472
AsuHPI GGTGA 2 cut(s) 726, 1225
AsuNHI GCTAGC 1 cut(s) 1105
AvaII GGWCC 1 cut(s) 1472
BaeGI GKGCMC 2 cut(s) 179, 1753
BanI GGYRCC 1 cut(s) 1162
BanII GRGCYC 5 cut(s) 28, 48, 117, 179, 787
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbsI GAAGAC 1 cut(s) 696
Bbv12I GWGCWC 3 cut(s) 28, 48, 787
BbvCI CCTCAGC 1 cut(s) 1101
BbvI GCAGC 6 cut(s) 66, 136, 1425, 1519, 1712, 1750
BccI CCATC 7 cut(s) 237, 392, 482, 539, 1235, 1496, 1532
BceAI ACGGC 1 cut(s) 175
BcoDI GTCTC 5 cut(s) 198, 428, 508, 962, 1349
BfaI CTAG 6 cut(s) 518, 1106, 1353, 1425, 1667, 1709
BfrI CTTAAG 1 cut(s) 1433
BglI GCCNNNNNGGC 1 cut(s) 121
BglII AGATCT 1 cut(s) 754
BlpI GCTNAGC 1 cut(s) 288
BmcAI AGTACT 1 cut(s) 508
Bme18I GGWCC 1 cut(s) 1472
BmgT120I GGNCC 4 cut(s) 175, 176, 1218, 1472
BmiI GGNNCC 6 cut(s) 114, 177, 178, 280, 1164, 1473
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 2 cut(s) 517, 1750
BmtI GCTAGC 1 cut(s) 1109
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 1 cut(s) 696
Bpu10I CCTNAGC 1 cut(s) 1101
Bpu1102I GCTNAGC 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 344
BsaAI YACGTR 1 cut(s) 143
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 1 cut(s) 895
BsaWI WCCGGW 2 cut(s) 37, 415
BsaXI ACNNNNNCTCC 4 cut(s) 1616, 1646, 1655, 1685
Bsc4I CCNNNNNNNGG 2 cut(s) 186, 1660
Bse118I RCCGGY 2 cut(s) 106, 158
Bse1I ACTGG 2 cut(s) 616, 704
Bse3DI GCAATG 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 415
BseDI CCNNGG 1 cut(s) 895
BseGI GGATG 5 cut(s) 229, 414, 625, 700, 1633
BseLI CCNNNNNNNGG 2 cut(s) 186, 1660
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 3 cut(s) 279, 1012, 1115
BseNI ACTGG 2 cut(s) 616, 704
BseRI GAGGAG 1 cut(s) 1580
BseSI GKGCMC 2 cut(s) 179, 1753
BseX3I CGGCCG 1 cut(s) 188
BseXI GCAGC 6 cut(s) 66, 136, 1425, 1519, 1712, 1750
BsgI GTGCAG 1 cut(s) 1424
Bsh1236I CGCG 3 cut(s) 77, 221, 223
Bsh1285I CGRYCG 1 cut(s) 191
BshFI GGCC 4 cut(s) 177, 190, 1099, 1219
BshNI GGYRCC 1 cut(s) 1162
BsiEI CGRYCG 1 cut(s) 191
BsiHKAI GWGCWC 3 cut(s) 28, 48, 787
BsiSI CCGG 5 cut(s) 38, 107, 159, 377, 416
BslFI GGGAC 1 cut(s) 1485
BslI CCNNNNNNNGG 2 cut(s) 186, 1660
BsmAI GTCTC 5 cut(s) 198, 428, 508, 962, 1349
BsmBI CGTCTC 3 cut(s) 198, 962, 1349
BsmFI GGGAC 1 cut(s) 1485
BsnI GGCC 4 cut(s) 177, 190, 1099, 1219
Bso31I GGTCTC 1 cut(s) 428
Bsp120I GGGCCC 1 cut(s) 175
Bsp1286I GDGCHC 6 cut(s) 28, 48, 117, 179, 787, 1753
Bsp13I TCCGGA 1 cut(s) 415
Bsp1407I TGTACA 1 cut(s) 1042
Bsp143I GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
Bsp1720I GCTNAGC 1 cut(s) 288
Bsp19I CCATGG 1 cut(s) 895
BspANI GGCC 4 cut(s) 177, 190, 1099, 1219
BspCNI CTCAG 3 cut(s) 280, 1011, 1114
BspEI TCCGGA 1 cut(s) 415
BspFNI CGCG 3 cut(s) 77, 221, 223
BspHI TCATGA 1 cut(s) 1596
BspLI GGNNCC 6 cut(s) 114, 177, 178, 280, 1164, 1473
BspOI GCTAGC 1 cut(s) 1109
BspPI GGATC 2 cut(s) 751, 1698
BspT107I GGYRCC 1 cut(s) 1162
BspTI CTTAAG 1 cut(s) 1433
BspTNI GGTCTC 1 cut(s) 428
BsrBI CCGCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 2 cut(s) 106, 158
BsrGI TGTACA 1 cut(s) 1042
BsrI ACTGG 2 cut(s) 616, 704
BssAI RCCGGY 2 cut(s) 106, 158
BssECI CCNNGG 1 cut(s) 895
BssMI GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
BssNI GRCGYC 1 cut(s) 80
BssT1I CCWWGG 1 cut(s) 895
Bst4CI ACNGT 3 cut(s) 768, 876, 928
Bst6I CTCTTC 1 cut(s) 1598
BstACI GRCGYC 1 cut(s) 80
BstAFI CTTAAG 1 cut(s) 1433
BstAUI TGTACA 1 cut(s) 1042
BstBAI YACGTR 1 cut(s) 143
BstC8I GCNNGC 4 cut(s) 108, 160, 1107, 1299
BstDEI CTNAG 3 cut(s) 288, 998, 1101
BstDSI CCRYGG 1 cut(s) 895
BstEII GGTNACC 2 cut(s) 732, 1231
BstENI CCTNNNNNAGG 1 cut(s) 1658
BstF5I GGATG 5 cut(s) 229, 414, 625, 700, 1633
BstFNI CGCG 3 cut(s) 77, 221, 223
BstHHI GCGC 1 cut(s) 223
BstKTI GATC 7 cut(s) 358, 746, 757, 1171, 1328, 1693, 1716
BstMAI GTCTC 5 cut(s) 198, 428, 508, 962, 1349
BstMBI GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
BstMCI CGRYCG 1 cut(s) 191
BstMWI GCNNNNNNNGC 6 cut(s) 32, 112, 121, 278, 1160, 1438
BstNSI RCATGY 3 cut(s) 1079, 1558, 1616
BstPI GGTNACC 2 cut(s) 732, 1231
BstSLI GKGCMC 2 cut(s) 179, 1753
BstUI CGCG 3 cut(s) 77, 221, 223
BstV1I GCAGC 6 cut(s) 66, 136, 1425, 1519, 1712, 1750
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 1 cut(s) 754
BstXI CCANNNNNNTGG 1 cut(s) 578
BstYI RGATCY 1 cut(s) 754
BstZI CGGCCG 1 cut(s) 188
BsuRI GGCC 4 cut(s) 177, 190, 1099, 1219
BtgI CCRYGG 1 cut(s) 895
BtsCI GGATG 5 cut(s) 229, 414, 625, 700, 1633
BtsIMutI CAGTG 2 cut(s) 346, 1137
Cac8I GCNNGC 4 cut(s) 108, 160, 1107, 1299
CciI TCATGA 1 cut(s) 1596
CfoI GCGC 1 cut(s) 223
Cfr10I RCCGGY 2 cut(s) 106, 158
Cfr13I GGNCC 4 cut(s) 175, 176, 1218, 1472
CseI GACGC 1 cut(s) 88
Csp6I GTAC 4 cut(s) 507, 994, 1043, 1195
CviQI GTAC 4 cut(s) 507, 994, 1043, 1195
DdeI CTNAG 3 cut(s) 288, 998, 1101
DpnI GATC 7 cut(s) 357, 745, 756, 1170, 1327, 1692, 1715
DpnII GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
DraIII CACNNNGTG 1 cut(s) 1402
EaeI YGGCCR 1 cut(s) 188
EagI CGGCCG 1 cut(s) 188
Eam1104I CTCTTC 1 cut(s) 1598
EarI CTCTTC 1 cut(s) 1598
EciI GGCGGA 2 cut(s) 93, 125
Ecl136II GAGCTC 3 cut(s) 26, 46, 785
EclXI CGGCCG 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 895
Eco147I AGGCCT 1 cut(s) 1099
Eco24I GRGCYC 5 cut(s) 28, 48, 117, 179, 787
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 1 cut(s) 1472
Eco52I CGGCCG 1 cut(s) 188
Eco53kI GAGCTC 3 cut(s) 26, 46, 785
Eco91I GGTNACC 2 cut(s) 732, 1231
EcoICRI GAGCTC 3 cut(s) 26, 46, 785
EcoNI CCTNNNNNAGG 1 cut(s) 1658
EcoO109I RGGNCCY 2 cut(s) 176, 1218
EcoO65I GGTNACC 2 cut(s) 732, 1231
EcoRI GAATTC 1 cut(s) 1272
EcoT14I CCWWGG 1 cut(s) 895
EcoT22I ATGCAT 1 cut(s) 437
EcoT38I GRGCYC 5 cut(s) 28, 48, 117, 179, 787
ErhI CCWWGG 1 cut(s) 895
Esp3I CGTCTC 3 cut(s) 198, 962, 1349
FalI AAGNNNNNCTT 2 cut(s) 1301, 1333
FaqI GGGAC 1 cut(s) 1485
FauI CCCGC 1 cut(s) 37
FauNDI CATATG 1 cut(s) 979
FblI GTMKAC 1 cut(s) 5
FokI GGATG 5 cut(s) 216, 421, 632, 707, 1640
FriOI GRGCYC 5 cut(s) 28, 48, 117, 179, 787
FspBI CTAG 6 cut(s) 518, 1106, 1353, 1425, 1667, 1709
GlaI GCGC 1 cut(s) 222
HaeIII GGCC 4 cut(s) 177, 190, 1099, 1219
HapII CCGG 5 cut(s) 38, 107, 159, 377, 416
HgaI GACGC 1 cut(s) 88
HhaI GCGC 1 cut(s) 223
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 1 cut(s) 221
HinP1I GCGC 1 cut(s) 221
HincII GTYRAC 2 cut(s) 6, 931
HindII GTYRAC 2 cut(s) 6, 931
HinfI GANTC 5 cut(s) 225, 412, 495, 1149, 1185
HpaII CCGG 5 cut(s) 38, 107, 159, 377, 416
HphI GGTGA 2 cut(s) 726, 1225
Hpy166II GTNNAC 4 cut(s) 6, 931, 1195, 1517
Hpy188I TCNGA 3 cut(s) 392, 1001, 1537
Hpy8I GTNNAC 4 cut(s) 6, 931, 1195, 1517
Hpy99I CGWCG 4 cut(s) 62, 65, 82, 122
HpyAV CCTTC 8 cut(s) 13, 413, 824, 1222, 1231, 1615, 1654, 1681
HpyCH4III ACNGT 3 cut(s) 768, 876, 928
HpyCH4IV ACGT 3 cut(s) 142, 596, 1450
HpyCH4V TGCA 6 cut(s) 435, 548, 763, 1175, 1441, 1700
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 112, 121, 278, 1160, 1438
HpyF3I CTNAG 3 cut(s) 288, 998, 1101
HpySE526I ACGT 3 cut(s) 142, 596, 1450
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 1 cut(s) 221
Kpn2I TCCGGA 1 cut(s) 415
KroI GCCGGC 2 cut(s) 106, 158
KroNI GCCGGC 2 cut(s) 108, 160
Kzo9I GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
LmnI GCTCC 7 cut(s) 23, 31, 40, 112, 278, 782, 1663
Lsp1109I GCAGC 6 cut(s) 66, 136, 1425, 1519, 1712, 1750
LweI GCATC 2 cut(s) 517, 1750
MaeI CTAG 6 cut(s) 518, 1106, 1353, 1425, 1667, 1709
MaeII ACGT 3 cut(s) 142, 596, 1450
MaeIII GTNAC 3 cut(s) 732, 1231, 1394
MalI GATC 7 cut(s) 357, 745, 756, 1170, 1327, 1692, 1715
MbiI CCGCTC 1 cut(s) 35
MboI GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
MboII GAAGA 8 cut(s) 106, 233, 696, 764, 1455, 1585, 1630, 1696
MfeI CAATTG 1 cut(s) 209
MflI RGATCY 1 cut(s) 754
MhlI GDGCHC 6 cut(s) 28, 48, 117, 179, 787, 1753
MluCI AATT 9 cut(s) 99, 209, 661, 678, 709, 842, 901, 1004, 1272
MlyI GAGTC 1 cut(s) 234
MmeI TCCRAC 1 cut(s) 276
Mph1103I ATGCAT 1 cut(s) 437
MreI CGCCGGCG 1 cut(s) 106
MroI TCCGGA 1 cut(s) 415
MroNI GCCGGC 2 cut(s) 106, 158
MseI TTAA 4 cut(s) 914, 1434, 1458, 1647
MslI CAYNNNNRTG 2 cut(s) 249, 1746
MspA1I CMGCKG 1 cut(s) 1238
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 5 cut(s) 38, 107, 159, 377, 416
MunI CAATTG 1 cut(s) 209
MvnI CGCG 3 cut(s) 77, 221, 223
MwoI GCNNNNNNNGC 6 cut(s) 32, 112, 121, 278, 1160, 1438
NaeI GCCGGC 2 cut(s) 108, 160
NcoI CCATGG 1 cut(s) 895
NdeI CATATG 1 cut(s) 979
NdeII GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
NgoMIV GCCGGC 2 cut(s) 106, 158
NheI GCTAGC 1 cut(s) 1105
NlaIV GGNNCC 6 cut(s) 114, 177, 178, 280, 1164, 1473
NmuCI GTSAC 3 cut(s) 732, 1231, 1394
NsiI ATGCAT 1 cut(s) 437
NspI RCATGY 3 cut(s) 1079, 1558, 1616
PagI TCATGA 1 cut(s) 1596
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 2 cut(s) 1075, 1612
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PdiI GCCGGC 2 cut(s) 108, 160
PfeI GAWTC 4 cut(s) 412, 495, 1149, 1185
PleI GAGTC 1 cut(s) 233
PpsI GAGTC 1 cut(s) 233
Ppu21I YACGTR 1 cut(s) 143
PscI ACATGT 2 cut(s) 1075, 1612
PsiI TTATAA 1 cut(s) 1028
Psp124BI GAGCTC 3 cut(s) 28, 48, 787
PspEI GGTNACC 2 cut(s) 732, 1231
PspN4I GGNNCC 6 cut(s) 114, 177, 178, 280, 1164, 1473
PspOMI GGGCCC 1 cut(s) 175
PspPI GGNCC 4 cut(s) 175, 176, 1218, 1472
PsuI RGATCY 1 cut(s) 754
RsaI GTAC 4 cut(s) 508, 995, 1044, 1196
RsaNI GTAC 4 cut(s) 507, 994, 1043, 1195
RseI CAYNNNNRTG 2 cut(s) 249, 1746
SacI GAGCTC 3 cut(s) 28, 48, 787
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 4 cut(s) 914, 1434, 1458, 1647
Sau3AI GATC 7 cut(s) 355, 743, 754, 1168, 1325, 1690, 1713
Sau96I GGNCC 4 cut(s) 175, 176, 1218, 1472
ScaI AGTACT 1 cut(s) 508
SchI GAGTC 1 cut(s) 234
SduI GDGCHC 6 cut(s) 28, 48, 117, 179, 787, 1753
SfaNI GCATC 2 cut(s) 517, 1750
SgrAI CRCCGGYG 1 cut(s) 106
SinI GGWCC 1 cut(s) 1472
SmiMI CAYNNNNRTG 2 cut(s) 249, 1746
SmlI CTYRAG 2 cut(s) 359, 1433
SmoI CTYRAG 2 cut(s) 359, 1433
Sse9I AATT 9 cut(s) 99, 209, 661, 678, 709, 842, 901, 1004, 1272
SseBI AGGCCT 1 cut(s) 1099
SspMI CTAG 6 cut(s) 518, 1106, 1353, 1425, 1667, 1709
SstI GAGCTC 3 cut(s) 28, 48, 787
StuI AGGCCT 1 cut(s) 1099
StyI CCWWGG 1 cut(s) 895
TaaI ACNGT 3 cut(s) 768, 876, 928
TaiI ACGT 3 cut(s) 145, 599, 1453
TaqI TCGA 6 cut(s) 5, 17, 48, 1250, 1347, 1491
TasI AATT 9 cut(s) 99, 209, 661, 678, 709, 842, 901, 1004, 1272
TatI WGTACW 2 cut(s) 506, 1042
TauI GCSGC 4 cut(s) 35, 74, 77, 190
TfiI GAWTC 4 cut(s) 412, 495, 1149, 1185
Tru1I TTAA 4 cut(s) 914, 1434, 1458, 1647
Tru9I TTAA 4 cut(s) 914, 1434, 1458, 1647
TscAI CASTG 2 cut(s) 346, 1137
TseFI GTSAC 3 cut(s) 732, 1231, 1394
TseI GCWGC 6 cut(s) 54, 124, 1438, 1507, 1700, 1738
Tsp45I GTSAC 3 cut(s) 732, 1231, 1394
TspDTI ATGAA 8 cut(s) 233, 425, 843, 855, 900, 957, 1236, 1585
TspGWI ACGGA 2 cut(s) 619, 1331
TspRI CASTG 2 cut(s) 346, 1137
Vha464I CTTAAG 1 cut(s) 1433
VpaK11BI GGWCC 1 cut(s) 1472
XagI CCTNNNNNAGG 1 cut(s) 1658
XapI RAATTY 4 cut(s) 99, 901, 1004, 1272
XbaI TCTAGA 1 cut(s) 1708
XceI RCATGY 3 cut(s) 1079, 1558, 1616
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 6 cut(s) 518, 1106, 1353, 1425, 1667, 1709
ZrmI AGTACT 1 cut(s) 508
Zsp2I ATGCAT 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.