MORC family CW-type zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G36270 AT4G36280 AT4G36290 |
| fragaria_vesca | FvH4_1g12391 FvH4_1g12391 |
| malus_domestica | MD02G1137200.v1.1 |
| prunus_persica | Prupe.7G163400_v2.0.a1 |
| pyrus_communis | pycom02g10860 |
| rosa_chinensis | RchiOBHm_Chr2g0100251 |
| rosa_multiflora | Rmu_sc0002547.1_g000014 |
| rosa_rugosa | Rorug02G0086800 |
| rosa_samantha | Rh2AG135800 Rh2BG139300 Rh2CG141100 Rh2DG141300 |
| rosa_wichuraiana | Rw2G010620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1598 |
| Acc16I | TGCGCA | 1 cut(s) | 470 |
| AccB1I | GGYRCC | 4 cut(s) | 4, 65, 320, 1192 |
| AccI | GTMKAC | 1 cut(s) | 107 |
| AccII | CGCG | 2 cut(s) | 597, 1570 |
| AccIII | TCCGGA | 1 cut(s) | 645 |
| AciI | CCGC | 5 cut(s) | 119, 122, 140, 225, 556 |
| AclWI | GGATC | 5 cut(s) | 449, 462, 804, 1479, 1530 |
| AcoI | YGGCCR | 1 cut(s) | 1737 |
| AcsI | RAATTY | 2 cut(s) | 1302, 1315 |
| AcuI | CTGAAG | 2 cut(s) | 480, 1448 |
| AcyI | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| AdeI | CACNNNGTG | 1 cut(s) | 1432 |
| AfaI | GTAC | 6 cut(s) | 360, 550, 957, 1028, 1226, 1409 |
| AfeI | AGCGCT | 1 cut(s) | 1753 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 37, 228, 1202, 1468, 1493, 1723 |
| AjnI | CCWGG | 1 cut(s) | 227 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1158, 1190 |
| AluBI | AGCT | 7 cut(s) | 43, 253, 334, 483, 608, 932, 1268 |
| AluI | AGCT | 7 cut(s) | 43, 253, 334, 483, 608, 932, 1268 |
| Alw21I | GWGCWC | 3 cut(s) | 82, 118, 1456 |
| Alw26I | GTCTC | 3 cut(s) | 780, 1682, 1769 |
| Alw44I | GTGCAC | 1 cut(s) | 1452 |
| AlwI | GGATC | 5 cut(s) | 449, 462, 804, 1479, 1530 |
| Ama87I | CYCGRG | 1 cut(s) | 264 |
| Aor13HI | TCCGGA | 1 cut(s) | 645 |
| Aor51HI | AGCGCT | 1 cut(s) | 1753 |
| AoxI | GGCC | 4 cut(s) | 230, 1247, 1537, 1737 |
| ApaLI | GTGCAC | 1 cut(s) | 1452 |
| ApeKI | GCWGC | 3 cut(s) | 142, 250, 932 |
| ApoI | RAATTY | 2 cut(s) | 1302, 1315 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 736, 768 |
| AspLEI | GCGC | 7 cut(s) | 7, 323, 471, 599, 996, 1195, 1754 |
| AspS9I | GGNCC | 4 cut(s) | 218, 231, 268, 1248 |
| AsuC2I | CCSGG | 2 cut(s) | 265, 266 |
| AsuII | TTCGAA | 1 cut(s) | 1280 |
| AvaI | CYCGRG | 1 cut(s) | 264 |
| AvaII | GGWCC | 2 cut(s) | 218, 268 |
| BaeGI | GKGCMC | 1 cut(s) | 1456 |
| BalI | TGGCCA | 1 cut(s) | 1739 |
| BamHI | GGATCC | 1 cut(s) | 454 |
| BanI | GGYRCC | 4 cut(s) | 4, 65, 320, 1192 |
| BanII | GRGCYC | 2 cut(s) | 829, 1617 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1632, 1664 |
| Bbv12I | GWGCWC | 3 cut(s) | 82, 118, 1456 |
| BbvI | GCAGC | 3 cut(s) | 154, 262, 919 |
| BccI | CCATC | 5 cut(s) | 35, 279, 434, 1265, 1729 |
| BceAI | ACGGC | 2 cut(s) | 197, 570 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 47, 81 |
| BciT130I | CCWGG | 1 cut(s) | 229 |
| BcnI | CCSGG | 2 cut(s) | 265, 266 |
| BcoDI | GTCTC | 3 cut(s) | 780, 1682, 1769 |
| BfaI | CTAG | 6 cut(s) | 44, 176, 560, 767, 1383, 1718 |
| BfmI | CTRYAG | 1 cut(s) | 806 |
| BfoI | RGCGCY | 4 cut(s) | 8, 324, 1196, 1755 |
| BglII | AGATCT | 1 cut(s) | 1355 |
| BisI | GCNGC | 5 cut(s) | 122, 143, 251, 557, 933 |
| BlpI | GCTNAGC | 1 cut(s) | 330 |
| BlsI | GCNGC | 5 cut(s) | 123, 144, 252, 558, 934 |
| BmcAI | AGTACT | 1 cut(s) | 1409 |
| Bme1390I | CCNGG | 3 cut(s) | 229, 265, 266 |
| Bme18I | GGWCC | 2 cut(s) | 218, 268 |
| BmeT110I | CYCGRG | 1 cut(s) | 264 |
| BmgT120I | GGNCC | 4 cut(s) | 218, 231, 268, 1248 |
| BmrFI | CCNGG | 3 cut(s) | 229, 265, 266 |
| BmrI | ACTGGG | 1 cut(s) | 715 |
| BmsI | GCATC | 2 cut(s) | 794, 1525 |
| BmuI | ACTGGG | 1 cut(s) | 715 |
| BpmI | CTGGAG | 1 cut(s) | 275 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 330 |
| Bpu14I | TTCGAA | 1 cut(s) | 1280 |
| BpuEI | CTTGAG | 1 cut(s) | 1123 |
| BpuMI | CCSGG | 2 cut(s) | 265, 266 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1515 |
| BsaHI | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| BsaI | GGTCTC | 1 cut(s) | 780 |
| BsaJI | CCNNGG | 5 cut(s) | 153, 213, 244, 264, 829 |
| BsaWI | WCCGGW | 2 cut(s) | 110, 645 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1679, 1709 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 37, 228, 1202, 1468, 1493, 1723 |
| Bse118I | RCCGGY | 2 cut(s) | 200, 935 |
| Bse1I | ACTGG | 5 cut(s) | 658, 710, 746, 1216, 1415 |
| Bse3DI | GCAATG | 1 cut(s) | 324 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1515 |
| BseAI | TCCGGA | 1 cut(s) | 645 |
| BseBI | CCWGG | 1 cut(s) | 229 |
| BseDI | CCNNGG | 5 cut(s) | 153, 213, 244, 264, 829 |
| BseGI | GGATG | 4 cut(s) | 27, 271, 667, 742 |
| BseJI | GATNNNNATC | 1 cut(s) | 1515 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 37, 228, 1202, 1468, 1493, 1723 |
| BseMI | GCAATG | 1 cut(s) | 324 |
| BseMII | CTCAG | 5 cut(s) | 321, 878, 1045, 1148, 1683 |
| BseNI | ACTGG | 5 cut(s) | 658, 710, 746, 1216, 1415 |
| BseSI | GKGCMC | 1 cut(s) | 1456 |
| BseXI | GCAGC | 3 cut(s) | 154, 262, 919 |
| BseYI | CCCAGC | 1 cut(s) | 418 |
| BsgI | GTGCAG | 1 cut(s) | 1700 |
| Bsh1236I | CGCG | 2 cut(s) | 597, 1570 |
| Bsh1285I | CGRYCG | 1 cut(s) | 111 |
| BshFI | GGCC | 4 cut(s) | 232, 1249, 1539, 1739 |
| BshNI | GGYRCC | 4 cut(s) | 4, 65, 320, 1192 |
| BsiEI | CGRYCG | 1 cut(s) | 111 |
| BsiHKAI | GWGCWC | 3 cut(s) | 82, 118, 1456 |
| BsiHKCI | CYCGRG | 1 cut(s) | 264 |
| BsiSI | CCGG | 6 cut(s) | 69, 111, 201, 265, 646, 936 |
| BslFI | GGGAC | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 37, 228, 1202, 1468, 1493, 1723 |
| BsmAI | GTCTC | 3 cut(s) | 780, 1682, 1769 |
| BsmFI | GGGAC | 1 cut(s) | 231 |
| BsnI | GGCC | 4 cut(s) | 232, 1249, 1539, 1739 |
| Bso31I | GGTCTC | 1 cut(s) | 780 |
| BsoBI | CYCGRG | 1 cut(s) | 264 |
| Bsp119I | TTCGAA | 1 cut(s) | 1280 |
| Bsp1286I | GDGCHC | 5 cut(s) | 82, 118, 829, 1456, 1617 |
| Bsp13I | TCCGGA | 1 cut(s) | 645 |
| Bsp143I | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 330 |
| Bsp19I | CCATGG | 1 cut(s) | 829 |
| Bsp68I | TCGCGA | 1 cut(s) | 1570 |
| BspACI | CCGC | 5 cut(s) | 119, 122, 140, 225, 556 |
| BspANI | GGCC | 4 cut(s) | 232, 1249, 1539, 1739 |
| BspCNI | CTCAG | 5 cut(s) | 322, 879, 1044, 1147, 1684 |
| BspEI | TCCGGA | 1 cut(s) | 645 |
| BspFNI | CGCG | 2 cut(s) | 597, 1570 |
| BspHI | TCATGA | 1 cut(s) | 1659 |
| BspPI | GGATC | 5 cut(s) | 449, 462, 804, 1479, 1530 |
| BspQI | GCTCTTC | 1 cut(s) | 1742 |
| BspT104I | TTCGAA | 1 cut(s) | 1280 |
| BspT107I | GGYRCC | 4 cut(s) | 4, 65, 320, 1192 |
| BspTNI | GGTCTC | 1 cut(s) | 780 |
| BsrDI | GCAATG | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 2 cut(s) | 200, 935 |
| BsrI | ACTGG | 5 cut(s) | 658, 710, 746, 1216, 1415 |
| BssAI | RCCGGY | 2 cut(s) | 200, 935 |
| BssECI | CCNNGG | 5 cut(s) | 153, 213, 244, 264, 829 |
| BssMI | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| BssNI | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| BssT1I | CCWWGG | 3 cut(s) | 153, 244, 829 |
| Bst2UI | CCWGG | 1 cut(s) | 229 |
| Bst4CI | ACNGT | 7 cut(s) | 65, 167, 810, 918, 989, 1292, 1819 |
| Bst6I | CTCTTC | 2 cut(s) | 1635, 1742 |
| BstACI | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| BstBI | TTCGAA | 1 cut(s) | 1280 |
| BstC8I | GCNNGC | 8 cut(s) | 126, 202, 261, 601, 731, 1329, 1456, 1537 |
| BstDEI | CTNAG | 6 cut(s) | 330, 887, 1031, 1134, 1575, 1692 |
| BstDSI | CCRYGG | 2 cut(s) | 213, 829 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1466, 1721 |
| BstF5I | GGATG | 4 cut(s) | 27, 271, 667, 742 |
| BstFNI | CGCG | 2 cut(s) | 597, 1570 |
| BstH2I | RGCGCY | 4 cut(s) | 8, 324, 1196, 1755 |
| BstHHI | GCGC | 7 cut(s) | 7, 323, 471, 599, 996, 1195, 1754 |
| BstKTI | GATC | 6 cut(s) | 457, 799, 1201, 1358, 1474, 1525 |
| BstMAI | GTCTC | 3 cut(s) | 780, 1682, 1769 |
| BstMBI | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| BstMCI | CGRYCG | 1 cut(s) | 111 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 148, 256, 320, 596, 605, 1760 |
| BstNI | CCWGG | 1 cut(s) | 229 |
| BstNSI | RCATGY | 1 cut(s) | 263 |
| BstSCI | CCNGG | 3 cut(s) | 227, 263, 264 |
| BstSFI | CTRYAG | 1 cut(s) | 806 |
| BstSLI | GKGCMC | 1 cut(s) | 1456 |
| BstUI | CGCG | 2 cut(s) | 597, 1570 |
| BstV1I | GCAGC | 3 cut(s) | 154, 262, 919 |
| BstX2I | RGATCY | 3 cut(s) | 454, 796, 1355 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 440, 620 |
| BstYI | RGATCY | 3 cut(s) | 454, 796, 1355 |
| BsuRI | GGCC | 4 cut(s) | 232, 1249, 1539, 1739 |
| BtgI | CCRYGG | 2 cut(s) | 213, 829 |
| BtsCI | GGATG | 4 cut(s) | 27, 271, 667, 742 |
| BtuMI | TCGCGA | 1 cut(s) | 1570 |
| Cac8I | GCNNGC | 8 cut(s) | 126, 202, 261, 601, 731, 1329, 1456, 1537 |
| CciI | TCATGA | 1 cut(s) | 1659 |
| CfoI | GCGC | 7 cut(s) | 7, 323, 471, 599, 996, 1195, 1754 |
| Cfr10I | RCCGGY | 2 cut(s) | 200, 935 |
| Cfr13I | GGNCC | 4 cut(s) | 218, 231, 268, 1248 |
| Cfr9I | CCCGGG | 1 cut(s) | 264 |
| Csp6I | GTAC | 6 cut(s) | 359, 549, 956, 1027, 1225, 1408 |
| CviAII | CATG | 8 cut(s) | 260, 478, 553, 802, 830, 1334, 1618, 1660 |
| CviQI | GTAC | 6 cut(s) | 359, 549, 956, 1027, 1225, 1408 |
| DdeI | CTNAG | 6 cut(s) | 330, 887, 1031, 1134, 1575, 1692 |
| DinI | GGCGCC | 3 cut(s) | 6, 322, 1194 |
| DpnI | GATC | 6 cut(s) | 456, 798, 1200, 1357, 1473, 1524 |
| DpnII | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| DraI | TTTAAA | 1 cut(s) | 1483 |
| DraIII | CACNNNGTG | 1 cut(s) | 1432 |
| EaeI | YGGCCR | 1 cut(s) | 1737 |
| Eam1104I | CTCTTC | 2 cut(s) | 1635, 1742 |
| EarI | CTCTTC | 2 cut(s) | 1635, 1742 |
| Eco130I | CCWWGG | 3 cut(s) | 153, 244, 829 |
| Eco24I | GRGCYC | 2 cut(s) | 829, 1617 |
| Eco31I | GGTCTC | 1 cut(s) | 780 |
| Eco32I | GATATC | 1 cut(s) | 1439 |
| Eco47I | GGWCC | 2 cut(s) | 218, 268 |
| Eco47III | AGCGCT | 1 cut(s) | 1753 |
| Eco57I | CTGAAG | 2 cut(s) | 480, 1448 |
| Eco88I | CYCGRG | 1 cut(s) | 264 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1466, 1721 |
| EcoO109I | RGGNCCY | 3 cut(s) | 218, 231, 1248 |
| EcoRI | GAATTC | 1 cut(s) | 1302 |
| EcoRII | CCWGG | 1 cut(s) | 227 |
| EcoRV | GATATC | 1 cut(s) | 1439 |
| EcoT14I | CCWWGG | 3 cut(s) | 153, 244, 829 |
| EcoT22I | ATGCAT | 2 cut(s) | 479, 1518 |
| EcoT38I | GRGCYC | 2 cut(s) | 829, 1617 |
| EgeI | GGCGCC | 3 cut(s) | 6, 322, 1194 |
| EheI | GGCGCC | 3 cut(s) | 6, 322, 1194 |
| ErhI | CCWWGG | 3 cut(s) | 153, 244, 829 |
| FaeI | CATG | 8 cut(s) | 263, 481, 556, 805, 833, 1337, 1621, 1663 |
| FaqI | GGGAC | 1 cut(s) | 231 |
| FatI | CATG | 8 cut(s) | 259, 477, 552, 801, 829, 1333, 1617, 1659 |
| FauNDI | CATATG | 1 cut(s) | 1012 |
| FblI | GTMKAC | 1 cut(s) | 107 |
| Fnu4HI | GCNGC | 5 cut(s) | 122, 143, 251, 557, 933 |
| FokI | GGATG | 4 cut(s) | 14, 258, 674, 749 |
| FriOI | GRGCYC | 2 cut(s) | 829, 1617 |
| Fsp4HI | GCNGC | 5 cut(s) | 122, 143, 251, 557, 933 |
| FspBI | CTAG | 6 cut(s) | 44, 176, 560, 767, 1383, 1718 |
| FspI | TGCGCA | 1 cut(s) | 470 |
| GlaI | GCGC | 7 cut(s) | 6, 322, 470, 598, 995, 1194, 1753 |
| GluI | GCNGC | 5 cut(s) | 122, 143, 251, 557, 933 |
| GsaI | CCCAGC | 1 cut(s) | 422 |
| GsuI | CTGGAG | 1 cut(s) | 275 |
| HaeII | RGCGCY | 4 cut(s) | 8, 324, 1196, 1755 |
| HaeIII | GGCC | 4 cut(s) | 232, 1249, 1539, 1739 |
| HapII | CCGG | 6 cut(s) | 69, 111, 201, 265, 646, 936 |
| HhaI | GCGC | 7 cut(s) | 7, 323, 471, 599, 996, 1195, 1754 |
| Hin1I | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| Hin1II | CATG | 8 cut(s) | 263, 481, 556, 805, 833, 1337, 1621, 1663 |
| Hin6I | GCGC | 7 cut(s) | 5, 321, 469, 597, 994, 1193, 1752 |
| HinP1I | GCGC | 7 cut(s) | 5, 321, 469, 597, 994, 1193, 1752 |
| HincII | GTYRAC | 2 cut(s) | 108, 948 |
| HindII | GTYRAC | 2 cut(s) | 108, 948 |
| HinfI | GANTC | 6 cut(s) | 72, 179, 537, 1179, 1215, 1565 |
| HpaII | CCGG | 6 cut(s) | 69, 111, 201, 265, 646, 936 |
| Hpy166II | GTNNAC | 3 cut(s) | 108, 948, 1454 |
| Hpy188I | TCNGA | 6 cut(s) | 77, 1034, 1137, 1467, 1476, 1585 |
| Hpy8I | GTNNAC | 3 cut(s) | 108, 948, 1454 |
| Hpy99I | CGWCG | 3 cut(s) | 56, 59, 109 |
| HpyAV | CCTTC | 9 cut(s) | 13, 455, 866, 1462, 1472, 1497, 1565, 1678, 1717 |
| HpyCH4III | ACNGT | 7 cut(s) | 65, 167, 810, 918, 989, 1292, 1819 |
| HpyCH4IV | ACGT | 2 cut(s) | 638, 1595 |
| HpyCH4V | TGCA | 7 cut(s) | 371, 477, 590, 785, 1454, 1516, 1681 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 148, 256, 320, 596, 605, 1760 |
| HpyF3I | CTNAG | 6 cut(s) | 330, 887, 1031, 1134, 1575, 1692 |
| HpySE526I | ACGT | 2 cut(s) | 638, 1595 |
| Hsp92I | GRCGYC | 4 cut(s) | 5, 321, 1193, 1595 |
| Hsp92II | CATG | 8 cut(s) | 263, 481, 556, 805, 833, 1337, 1621, 1663 |
| HspAI | GCGC | 7 cut(s) | 5, 321, 469, 597, 994, 1193, 1752 |
| KasI | GGCGCC | 3 cut(s) | 4, 320, 1192 |
| KflI | GGGWCCC | 1 cut(s) | 218 |
| Kpn2I | TCCGGA | 1 cut(s) | 645 |
| KroI | GCCGGC | 1 cut(s) | 200 |
| KroNI | GCCGGC | 1 cut(s) | 202 |
| Kzo9I | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| LguI | GCTCTTC | 1 cut(s) | 1742 |
| LmnI | GCTCC | 6 cut(s) | 40, 77, 113, 163, 256, 824 |
| Lsp1109I | GCAGC | 3 cut(s) | 154, 262, 919 |
| LweI | GCATC | 2 cut(s) | 794, 1525 |
| MaeI | CTAG | 6 cut(s) | 44, 176, 560, 767, 1383, 1718 |
| MaeII | ACGT | 2 cut(s) | 638, 1595 |
| MaeIII | GTNAC | 5 cut(s) | 1207, 1261, 1424, 1498, 1591 |
| MalI | GATC | 6 cut(s) | 456, 798, 1200, 1357, 1473, 1524 |
| MboI | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| MboII | GAAGA | 5 cut(s) | 275, 1269, 1350, 1652, 1759 |
| MfeI | CAATTG | 1 cut(s) | 1420 |
| MflI | RGATCY | 3 cut(s) | 454, 796, 1355 |
| MhlI | GDGCHC | 5 cut(s) | 82, 118, 829, 1456, 1617 |
| MlsI | TGGCCA | 1 cut(s) | 1739 |
| MluNI | TGGCCA | 1 cut(s) | 1739 |
| Mly113I | GGCGCC | 3 cut(s) | 5, 321, 1193 |
| MlyI | GAGTC | 2 cut(s) | 81, 173 |
| MmeI | TCCRAC | 3 cut(s) | 55, 1279, 1474 |
| Mox20I | TGGCCA | 1 cut(s) | 1739 |
| Mph1103I | ATGCAT | 2 cut(s) | 479, 1518 |
| MroI | TCCGGA | 1 cut(s) | 645 |
| MroNI | GCCGGC | 1 cut(s) | 200 |
| MscI | TGGCCA | 1 cut(s) | 1739 |
| MseI | TTAA | 4 cut(s) | 1061, 1092, 1119, 1482 |
| MslI | CAYNNNNRTG | 1 cut(s) | 291 |
| Msp20I | TGGCCA | 1 cut(s) | 1739 |
| MspA1I | CMGCKG | 2 cut(s) | 253, 1268 |
| MspI | CCGG | 6 cut(s) | 69, 111, 201, 265, 646, 936 |
| MspR9I | CCNGG | 3 cut(s) | 229, 265, 266 |
| MunI | CAATTG | 1 cut(s) | 1420 |
| MvaI | CCWGG | 1 cut(s) | 229 |
| MvnI | CGCG | 2 cut(s) | 597, 1570 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 148, 256, 320, 596, 605, 1760 |
| NaeI | GCCGGC | 1 cut(s) | 202 |
| NarI | GGCGCC | 3 cut(s) | 5, 321, 1193 |
| NciI | CCSGG | 2 cut(s) | 265, 266 |
| NcoI | CCATGG | 1 cut(s) | 829 |
| NdeI | CATATG | 1 cut(s) | 1012 |
| NdeII | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| NgoMIV | GCCGGC | 1 cut(s) | 200 |
| NlaIII | CATG | 8 cut(s) | 263, 481, 556, 805, 833, 1337, 1621, 1663 |
| NmuCI | GTSAC | 3 cut(s) | 1261, 1424, 1591 |
| NruI | TCGCGA | 1 cut(s) | 1570 |
| NsbI | TGCGCA | 1 cut(s) | 470 |
| NsiI | ATGCAT | 2 cut(s) | 479, 1518 |
| NspI | RCATGY | 1 cut(s) | 263 |
| NspV | TTCGAA | 1 cut(s) | 1280 |
| PaeI | GCATGC | 1 cut(s) | 263 |
| PagI | TCATGA | 1 cut(s) | 1659 |
| PciSI | GCTCTTC | 1 cut(s) | 1742 |
| PdiI | GCCGGC | 1 cut(s) | 202 |
| PfeI | GAWTC | 4 cut(s) | 537, 1179, 1215, 1565 |
| PkrI | GCNGC | 5 cut(s) | 123, 144, 252, 558, 934 |
| PleI | GAGTC | 2 cut(s) | 80, 173 |
| PluTI | GGCGCC | 3 cut(s) | 8, 324, 1196 |
| PpsI | GAGTC | 2 cut(s) | 80, 173 |
| PpuMI | RGGWCCY | 1 cut(s) | 218 |
| Psp5II | RGGWCCY | 1 cut(s) | 218 |
| Psp6I | CCWGG | 1 cut(s) | 227 |
| PspFI | CCCAGC | 1 cut(s) | 418 |
| PspGI | CCWGG | 1 cut(s) | 227 |
| PspPI | GGNCC | 4 cut(s) | 218, 231, 268, 1248 |
| PspPPI | RGGWCCY | 1 cut(s) | 218 |
| PsuI | RGATCY | 3 cut(s) | 454, 796, 1355 |
| PvuII | CAGCTG | 2 cut(s) | 253, 1268 |
| RruI | TCGCGA | 1 cut(s) | 1570 |
| RsaI | GTAC | 6 cut(s) | 360, 550, 957, 1028, 1226, 1409 |
| RsaNI | GTAC | 6 cut(s) | 359, 549, 956, 1027, 1225, 1408 |
| RseI | CAYNNNNRTG | 1 cut(s) | 291 |
| SalI | GTCGAC | 1 cut(s) | 106 |
| SapI | GCTCTTC | 1 cut(s) | 1742 |
| SaqAI | TTAA | 4 cut(s) | 1061, 1092, 1119, 1482 |
| SatI | GCNGC | 5 cut(s) | 122, 143, 251, 557, 933 |
| Sau3AI | GATC | 6 cut(s) | 454, 796, 1198, 1355, 1471, 1522 |
| Sau96I | GGNCC | 4 cut(s) | 218, 231, 268, 1248 |
| ScaI | AGTACT | 1 cut(s) | 1409 |
| SchI | GAGTC | 2 cut(s) | 81, 173 |
| ScrFI | CCNGG | 3 cut(s) | 229, 265, 266 |
| SduI | GDGCHC | 5 cut(s) | 82, 118, 829, 1456, 1617 |
| SfaNI | GCATC | 2 cut(s) | 794, 1525 |
| SfcI | CTRYAG | 1 cut(s) | 806 |
| SfoI | GGCGCC | 3 cut(s) | 6, 322, 1194 |
| SfuI | TTCGAA | 1 cut(s) | 1280 |
| SinI | GGWCC | 2 cut(s) | 218, 268 |
| SmaI | CCCGGG | 1 cut(s) | 266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 291 |
| SmlI | CTYRAG | 1 cut(s) | 1102 |
| SmoI | CTYRAG | 1 cut(s) | 1102 |
| SphI | GCATGC | 1 cut(s) | 263 |
| SsiI | CCGC | 5 cut(s) | 119, 122, 140, 225, 556 |
| SspDI | GGCGCC | 3 cut(s) | 4, 320, 1192 |
| SspMI | CTAG | 6 cut(s) | 44, 176, 560, 767, 1383, 1718 |
| StyD4I | CCNGG | 3 cut(s) | 227, 263, 264 |
| StyI | CCWWGG | 3 cut(s) | 153, 244, 829 |
| TaaI | ACNGT | 7 cut(s) | 65, 167, 810, 918, 989, 1292, 1819 |
| TaiI | ACGT | 2 cut(s) | 641, 1598 |
| TaqI | TCGA | 2 cut(s) | 107, 1280 |
| TatI | WGTACW | 2 cut(s) | 955, 1407 |
| TauI | GCSGC | 2 cut(s) | 124, 559 |
| TfiI | GAWTC | 4 cut(s) | 537, 1179, 1215, 1565 |
| Tru1I | TTAA | 4 cut(s) | 1061, 1092, 1119, 1482 |
| Tru9I | TTAA | 4 cut(s) | 1061, 1092, 1119, 1482 |
| TseFI | GTSAC | 3 cut(s) | 1261, 1424, 1591 |
| TseI | GCWGC | 3 cut(s) | 142, 250, 932 |
| Tsp45I | GTSAC | 3 cut(s) | 1261, 1424, 1591 |
| TspGWI | ACGGA | 1 cut(s) | 1361 |
| TspMI | CCCGGG | 1 cut(s) | 264 |
| VneI | GTGCAC | 1 cut(s) | 1452 |
| VpaK11BI | GGWCC | 2 cut(s) | 218, 268 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1466, 1721 |
| XapI | RAATTY | 2 cut(s) | 1302, 1315 |
| XceI | RCATGY | 1 cut(s) | 263 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 34, 440 |
| XmaI | CCCGGG | 1 cut(s) | 264 |
| XmiI | GTMKAC | 1 cut(s) | 107 |
| XspI | CTAG | 6 cut(s) | 44, 176, 560, 767, 1383, 1718 |
| ZraI | GACGTC | 1 cut(s) | 1596 |
| ZrmI | AGTACT | 1 cut(s) | 1409 |
| Zsp2I | ATGCAT | 2 cut(s) | 479, 1518 |