Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0015834

Physical Location & Seq

Genomic Coordinates Forward (+)

9823408 .. 9825918

Gene Structure 2511 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g16980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCCGTTGATTCAGTGACTTCATCTCCTCTTGGCCCGCCGGCCACCGAGAAGGACGCCAAGGCGCTTCAGTTCATAGAGGAGACGACCAAGAACACTGACGCGGTGCAAGAGAGGGTTCTCGGTGAGATTCTGAGACAAAACGCCGAAGCCGAGTACCTAAAACGTTTCTGTATGAACGGAGCGACTGACCGGGAATCTTTCAAGTCCAAAATCCCGGTGGTCACGTATGAAGATCTCCAGCCTGAGATTCAACGTATCGCCAATGGTGACCGCTCTCCCATCTTGAGCTCTCGTCCCATCTCTGAATTTCTCACCAGTTCTGGTACTTCAGCCGGTGAGAGGAAACTCATGCCTACAATTCATGAAGAATTGGACCGCCGCACACTATTGTACAGCTTGCTCCAACCTGTGATGAACCTTTACGTACCGGACTTGGACAAGGGGAAGGGCTTGTACTTCTTGTTCATCAAGTCAGAGACCAAGACTCCCGGCGGGCTTGTTGCCCGTCCGGTTTTGACGAGTTACTACAAGAGTGAGCACTTCAAGACCAGGCCACACGACCCCTACAATGTCTACACCAGCCCCAACGAGGCTATTCTCTGCTCGGACTCGTTCCAAAGCATGTACTCACAAATGCTTTGCGGCCTCATTATGCGCAAGGAAGTTCTCAGAGTCGGGGCGGTCTTTGCCTCCGGCCTTCTCCGAGCCATCCGGTTCCTCCAGATCAACTGGCAACAACTAGCTCACGACATCGAAACGGGAACTCTAAACCCTAAAATCACAGATGCATCTATTCGAGAGAAGATGGTGGAGATTTTGAAACCCGACGCGGAGCTCGCCGAGTTCATCAGAAAAGAGTGTGAAGGGGAGAATTTAGAGGGGATAATCCCAAGGATTTGGCCCAACACAAAGTACCTTGATGTGATCGTCACCGGTGCAATGGCTCAGTATATTCAAACACTCGACTACTACAGCAATAGCCTACCGAAGGCTTGCACAATGTACGCTTCTTCCGAATGCTATTTTGGCCTGAACCTTAAGCCGATGTGCGACCCTTCCGAAGTGTCGTACACCATCATGCCGATGATGGGCTATTTCGAGTTCATTCCACACGATCCATCTGCTCCTCCTCTGTCCAAAAAGTCACCTCCAAGGCTCGTAGACCTTGCGGACCTGGAAGTCGGAAAAGAATATGAGTTGGTCATTTCCACATACGCAGGACTTTGCCGTTACAGAGTCGGAGACATTCTCCGAGTCACCGGCTTCTACAACGCCGCGCCACAGTTCCGGTTTATCAGGAGGAAGAACGTTTTGTTGAGTATTGACGCCGACAAAACCGACGAGGCGGAGCTCCAGAAGGGCATTGACAACGCCGCCGAACTCCTCCGTGAATTCAACACTTCTGTGGTGGAGTACACAAGCTACGCCGATACCAAAACATTCCCGGGACATTACGTCATTTACTGGGAGTTGATGGTGAAGGATCCGTCGATCAGTGCCCCAAGACACGAGGTTCTTGACCAGTGCTGCCTCGTAATGGAGGAGTCCCTAAACTCTGTGTACCGGCAATACCGAGTTTCTGACAAAACAATCGGGCCGCTCGAGATTAGGGTTGTGAAGAGTGGCACATTCGAGGAGCTCATGGACTACGCTATATCCCGCGGTGCGTCGATCAATCAGTACAAGGCACCGAGATGCGTGAACTTCTCGCCCATCATGGAGTTGCTGGACTCTAGGGTTGAATCGGTGCACTTCAGTCCGGCGCTGCCGCATTGGACCCCGGAGCGACGCCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0010252 GO:0010279 GO:0016874 GO:0016879 GO:0016881 GO:0042221 GO:0042592 GO:0048878 GO:0050896 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

GH3

Protein Analysis

600

Amino Acids

67.96

Weight (kDa)

5.6

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	23 - 330	3.9e-121	GH3 family N-terminal domain
GH3_M	PF23571	358 - 435	2.4e-28	GH3 family central domain
GH3_C	PF23572	451 - 570	7.4e-38	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59500 AT2G23170 AT4G37390
fragaria_vesca	FvH4_1g16980
malus_domestica	MD02G1180300.v1.1 MD15G1290900.v1.1
prunus_persica	Prupe.6G226100_v2.0.a1
pyrus_communis	pycom02g14600 pycom15g25440
rosa_laevigata	RLG00000017554
rosa_multiflora	Rmu_sc0002945.1_g000004
rosa_roxburghii	Rroxscaffold_2G00136610
rosa_rugosa	Rorug02G0140200
rosa_samantha	Rh2CG196000
rosa_wichuraiana	Rw2G015090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1181
Acc16I	TGCGCA	1 cut(s)	659
AccB1I	GGYRCC	1 cut(s)	1690
AccBSI	CCGCTC	2 cut(s)	276, 1603
AccI	GTMKAC	2 cut(s)	576, 1164
AccII	CGCG	4 cut(s)	104, 833, 1280, 1665
AclI	AACGTT	2 cut(s)	166, 1311
AclWI	GGATC	3 cut(s)	1112, 1481, 1494
AcoI	YGGCCR	2 cut(s)	3, 42
AcsI	RAATTY	3 cut(s)	308, 874, 1394
AcuI	CTGAAG	3 cut(s)	53, 315, 1741
AcyI	GRCGYC	3 cut(s)	57, 1329, 1792
AfiI	CCNNNNNNNGG	5 cut(s)	342, 592, 991, 1091, 1540
AflII	CTTAAG	1 cut(s)	1040
AgeI	ACCGGT	1 cut(s)	935
AgsI	TTSAA	7 cut(s)	205, 254, 547, 823, 959, 1399, 1745
AhdI	GACNNNNNGTC	1 cut(s)	1457
AjnI	CCWGG	2 cut(s)	551, 1176
AjuI	GAANNNNNNNTTGG	2 cut(s)	1011, 1043
AleI	CACNNNNGTG	1 cut(s)	1406
AluBI	AGCT	7 cut(s)	291, 399, 746, 838, 1354, 1425, 1642
AluI	AGCT	7 cut(s)	291, 399, 746, 838, 1354, 1425, 1642
Alw21I	GWGCWC	6 cut(s)	293, 543, 840, 1356, 1644, 1755
Alw26I	GTCTC	4 cut(s)	77, 130, 473, 1239
Alw44I	GTGCAC	1 cut(s)	1751
AlwI	GGATC	3 cut(s)	1112, 1481, 1494
Ama87I	CYCGRG	2 cut(s)	1447, 1604
AoxI	GGCC	9 cut(s)	3, 34, 42, 554, 646, 697, 902, 1030, 1598
ApaLI	GTGCAC	1 cut(s)	1751
ApeKI	GCWGC	2 cut(s)	1530, 1768
ApoI	RAATTY	3 cut(s)	308, 874, 1394
AsiGI	ACCGGT	1 cut(s)	935
AspLEI	GCGC	4 cut(s)	67, 660, 1282, 1768
AspS9I	GGNCC	6 cut(s)	35, 376, 903, 1174, 1598, 1779
AsuC2I	CCSGG	6 cut(s)	194, 218, 492, 1448, 1449, 1784
AsuHPI	GGTGA	8 cut(s)	137, 281, 307, 350, 925, 1140, 1252, 1492
AvaI	CYCGRG	2 cut(s)	1447, 1604
AvaII	GGWCC	3 cut(s)	376, 1174, 1779
BaeGI	GKGCMC	2 cut(s)	1504, 1755
BamHI	GGATCC	1 cut(s)	1486
BanI	GGYRCC	1 cut(s)	1690
BanII	GRGCYC	4 cut(s)	293, 840, 1356, 1644
BarI	GAAGNNNNNNTAC	2 cut(s)	440, 472
BauI	CACGAG	1 cut(s)	1511
Bbv12I	GWGCWC	6 cut(s)	293, 543, 840, 1356, 1644, 1755
BbvI	GCAGC	2 cut(s)	1517, 1755
BccI	CCATC	9 cut(s)	290, 308, 719, 802, 1084, 1085, 1129, 1471, 1724
BceAI	ACGGC	1 cut(s)	1215
BcgI	CGANNNNNNTGC	2 cut(s)	1106, 1140
BciT130I	CCWGG	2 cut(s)	553, 1178
BcnI	CCSGG	6 cut(s)	194, 218, 492, 1448, 1449, 1784
BcoDI	GTCTC	4 cut(s)	77, 130, 473, 1239
BfaI	CTAG	2 cut(s)	743, 1737
BfmI	CTRYAG	1 cut(s)	973
BfoI	RGCGCY	2 cut(s)	68, 1769
BfrI	CTTAAG	1 cut(s)	1040
BglII	AGATCT	1 cut(s)	235
BisI	GCNGC	8 cut(s)	382, 646, 1278, 1377, 1531, 1601, 1769, 1772
BlsI	GCNGC	8 cut(s)	383, 647, 1279, 1378, 1532, 1602, 1770, 1773
Bme1390I	CCNGG	8 cut(s)	194, 218, 492, 553, 1178, 1448, 1449, 1784
Bme18I	GGWCC	3 cut(s)	376, 1174, 1779
BmeRI	GACNNNNNGTC	1 cut(s)	1457
BmeT110I	CYCGRG	2 cut(s)	1447, 1604
BmgT120I	GGNCC	6 cut(s)	35, 376, 903, 1174, 1598, 1779
BmiI	GGNNCC	4 cut(s)	719, 1488, 1692, 1781
BmrFI	CCNGG	8 cut(s)	194, 218, 492, 553, 1178, 1448, 1449, 1784
BmrI	ACTGGG	1 cut(s)	1477
BmsI	GCATC	3 cut(s)	778, 800, 1688
BmuI	ACTGGG	1 cut(s)	1477
BplI	GAGNNNNNCTC	2 cut(s)	1236, 1268
BpmI	CTGGAG	3 cut(s)	224, 707, 1340
BpuEI	CTTGAG	1 cut(s)	307
BpuMI	CCSGG	6 cut(s)	194, 218, 492, 1448, 1449, 1784
BsaAI	YACGTR	2 cut(s)	228, 427
BsaHI	GRCGYC	3 cut(s)	57, 1329, 1792
BsaI	GGTCTC	1 cut(s)	473
BsaJI	CCNNGG	6 cut(s)	60, 893, 1154, 1447, 1663, 1782
BsaWI	WCCGGW	5 cut(s)	430, 511, 714, 935, 1290
BsaXI	ACNNNNNCTCC	4 cut(s)	10, 40, 472, 502
Bsc4I	CCNNNNNNNGG	5 cut(s)	342, 592, 991, 1091, 1540
Bse118I	RCCGGY	5 cut(s)	40, 335, 935, 1262, 1566
Bse1I	ACTGG	4 cut(s)	318, 737, 1472, 1525
Bse3DI	GCAATG	1 cut(s)	948
BseBI	CCWGG	2 cut(s)	553, 1178
BseDI	CCNNGG	6 cut(s)	60, 893, 1154, 1447, 1663, 1782
BseGI	GGATG	1 cut(s)	711
BseLI	CCNNNNNNNGG	5 cut(s)	342, 592, 991, 1091, 1540
BseMI	GCAATG	1 cut(s)	948
BseMII	CTCAG	4 cut(s)	125, 237, 685, 962
BseNI	ACTGG	4 cut(s)	318, 737, 1472, 1525
BseRI	GAGGAG	7 cut(s)	18, 95, 1119, 1122, 1376, 1559, 1652
BseSI	GKGCMC	2 cut(s)	1504, 1755
BseXI	GCAGC	2 cut(s)	1517, 1755
Bsh1236I	CGCG	4 cut(s)	104, 833, 1280, 1665
BshFI	GGCC	9 cut(s)	5, 36, 44, 556, 648, 699, 904, 1032, 1600
BshNI	GGYRCC	1 cut(s)	1690
BshTI	ACCGGT	1 cut(s)	935
BsiHKAI	GWGCWC	6 cut(s)	293, 543, 840, 1356, 1644, 1755
BsiHKCI	CYCGRG	2 cut(s)	1447, 1604
BslFI	GGGAC	3 cut(s)	282, 1464, 1534
BslI	CCNNNNNNNGG	5 cut(s)	342, 592, 991, 1091, 1540
BsmAI	GTCTC	4 cut(s)	77, 130, 473, 1239
BsmBI	CGTCTC	1 cut(s)	77
BsmFI	GGGAC	3 cut(s)	282, 1464, 1534
BsmI	GAATGC	1 cut(s)	1025
BsnI	GGCC	9 cut(s)	5, 36, 44, 556, 648, 699, 904, 1032, 1600
Bso31I	GGTCTC	1 cut(s)	473
BsoBI	CYCGRG	2 cut(s)	1447, 1604
Bsp1286I	GDGCHC	7 cut(s)	293, 543, 840, 1356, 1504, 1644, 1755
Bsp1407I	TGTACA	1 cut(s)	393
Bsp143I	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
BspANI	GGCC	9 cut(s)	5, 36, 44, 556, 648, 699, 904, 1032, 1600
BspCNI	CTCAG	4 cut(s)	126, 238, 684, 961
BspFNI	CGCG	4 cut(s)	104, 833, 1280, 1665
BspHI	TCATGA	1 cut(s)	364
BspLI	GGNNCC	4 cut(s)	719, 1488, 1692, 1781
BspPI	GGATC	3 cut(s)	1112, 1481, 1494
BspT107I	GGYRCC	1 cut(s)	1690
BspTI	CTTAAG	1 cut(s)	1040
BspTNI	GGTCTC	1 cut(s)	473
BsrBI	CCGCTC	2 cut(s)	276, 1603
BsrDI	GCAATG	1 cut(s)	948
BsrFI	RCCGGY	5 cut(s)	40, 335, 935, 1262, 1566
BsrGI	TGTACA	1 cut(s)	393
BsrI	ACTGG	4 cut(s)	318, 737, 1472, 1525
BssAI	RCCGGY	5 cut(s)	40, 335, 935, 1262, 1566
BssECI	CCNNGG	6 cut(s)	60, 893, 1154, 1447, 1663, 1782
BssMI	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
BssNI	GRCGYC	3 cut(s)	57, 1329, 1792
BssSI	CACGAG	1 cut(s)	1511
BssT1I	CCWWGG	3 cut(s)	60, 893, 1154
Bst2BI	CACGAG	1 cut(s)	1511
Bst2UI	CCWGG	2 cut(s)	553, 1178
Bst4CI	ACNGT	1 cut(s)	1287
Bst6I	CTCTTC	1 cut(s)	1616
BstACI	GRCGYC	3 cut(s)	57, 1329, 1792
BstAFI	CTTAAG	1 cut(s)	1040
BstAUI	TGTACA	1 cut(s)	393
BstBAI	YACGTR	2 cut(s)	228, 427
BstC8I	GCNNGC	6 cut(s)	38, 42, 401, 497, 840, 997
BstDEI	CTNAG	4 cut(s)	134, 246, 671, 948
BstDSI	CCRYGG	1 cut(s)	1663
BstEII	GGTNACC	1 cut(s)	269
BstENI	CCTNNNNNAGG	1 cut(s)	989
BstF5I	GGATG	1 cut(s)	711
BstFNI	CGCG	4 cut(s)	104, 833, 1280, 1665
BstH2I	RGCGCY	2 cut(s)	68, 1769
BstHHI	GCGC	4 cut(s)	67, 660, 1282, 1768
BstKTI	GATC	7 cut(s)	238, 729, 930, 1120, 1489, 1497, 1677
BstMAI	GTCTC	4 cut(s)	77, 130, 473, 1239
BstMBI	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
BstMWI	GCNNNNNNNGC	3 cut(s)	689, 839, 1029
BstNI	CCWGG	2 cut(s)	553, 1178
BstNSI	RCATGY	1 cut(s)	628
BstPI	GGTNACC	1 cut(s)	269
BstSCI	CCNGG	8 cut(s)	192, 216, 490, 551, 1176, 1446, 1447, 1782
BstSFI	CTRYAG	1 cut(s)	973
BstSLI	GKGCMC	2 cut(s)	1504, 1755
BstSNI	TACGTA	1 cut(s)	427
BstUI	CGCG	4 cut(s)	104, 833, 1280, 1665
BstV1I	GCAGC	2 cut(s)	1517, 1755
BstX2I	RGATCY	2 cut(s)	235, 1486
BstXI	CCANNNNNNTGG	1 cut(s)	900
BstYI	RGATCY	2 cut(s)	235, 1486
BsuRI	GGCC	9 cut(s)	5, 36, 44, 556, 648, 699, 904, 1032, 1600
BtgI	CCRYGG	1 cut(s)	1663
BtsCI	GGATG	1 cut(s)	711
BtsIMutI	CAGTG	5 cut(s)	21, 96, 1504, 1532, 1795
Cac8I	GCNNGC	6 cut(s)	38, 42, 401, 497, 840, 997
CciI	TCATGA	1 cut(s)	364
CfoI	GCGC	4 cut(s)	67, 660, 1282, 1768
Cfr10I	RCCGGY	5 cut(s)	40, 335, 935, 1262, 1566
Cfr13I	GGNCC	6 cut(s)	35, 376, 903, 1174, 1598, 1779
Cfr42I	CCGCGG	1 cut(s)	1666
Cfr9I	CCCGGG	1 cut(s)	1447
CseI	GACGC	5 cut(s)	65, 110, 839, 1337, 1659
CspAI	ACCGGT	1 cut(s)	935
CviAII	CATG	6 cut(s)	352, 365, 625, 1081, 1645, 1720
DdeI	CTNAG	4 cut(s)	134, 246, 671, 948
DpnI	GATC	7 cut(s)	237, 728, 929, 1119, 1488, 1496, 1676
DpnII	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
DrdI	GACNNNNNNGTC	1 cut(s)	1181
DriI	GACNNNNNGTC	1 cut(s)	1457
DseDI	GACNNNNNNGTC	1 cut(s)	1181
EaeI	YGGCCR	2 cut(s)	3, 42
Eam1104I	CTCTTC	1 cut(s)	1616
Eam1105I	GACNNNNNGTC	1 cut(s)	1457
EarI	CTCTTC	1 cut(s)	1616
EciI	GGCGGA	1 cut(s)	1364
Ecl136II	GAGCTC	4 cut(s)	291, 838, 1354, 1642
Eco105I	TACGTA	1 cut(s)	427
Eco130I	CCWWGG	3 cut(s)	60, 893, 1154
Eco24I	GRGCYC	4 cut(s)	293, 840, 1356, 1644
Eco31I	GGTCTC	1 cut(s)	473
Eco47I	GGWCC	3 cut(s)	376, 1174, 1779
Eco53kI	GAGCTC	4 cut(s)	291, 838, 1354, 1642
Eco57I	CTGAAG	3 cut(s)	53, 315, 1741
Eco88I	CYCGRG	2 cut(s)	1447, 1604
Eco91I	GGTNACC	1 cut(s)	269
EcoICRI	GAGCTC	4 cut(s)	291, 838, 1354, 1642
EcoNI	CCTNNNNNAGG	1 cut(s)	989
EcoO65I	GGTNACC	1 cut(s)	269
EcoRI	GAATTC	1 cut(s)	1394
EcoRII	CCWGG	2 cut(s)	551, 1176
EcoT14I	CCWWGG	3 cut(s)	60, 893, 1154
EcoT22I	ATGCAT	1 cut(s)	793
EcoT38I	GRGCYC	4 cut(s)	293, 840, 1356, 1644
ErhI	CCWWGG	3 cut(s)	60, 893, 1154
Esp3I	CGTCTC	1 cut(s)	77
FaeI	CATG	6 cut(s)	355, 368, 628, 1084, 1648, 1723
FaqI	GGGAC	3 cut(s)	282, 1464, 1534
FatI	CATG	6 cut(s)	351, 364, 624, 1080, 1644, 1719
FauI	CCCGC	3 cut(s)	45, 488, 1670
FblI	GTMKAC	2 cut(s)	576, 1164
Fnu4HI	GCNGC	8 cut(s)	382, 646, 1278, 1377, 1531, 1601, 1769, 1772
FokI	GGATG	1 cut(s)	698
FriOI	GRGCYC	4 cut(s)	293, 840, 1356, 1644
Fsp4HI	GCNGC	8 cut(s)	382, 646, 1278, 1377, 1531, 1601, 1769, 1772
FspBI	CTAG	2 cut(s)	743, 1737
FspI	TGCGCA	1 cut(s)	659
GlaI	GCGC	4 cut(s)	66, 659, 1281, 1767
GluI	GCNGC	8 cut(s)	382, 646, 1278, 1377, 1531, 1601, 1769, 1772
GsuI	CTGGAG	3 cut(s)	224, 707, 1340
HaeII	RGCGCY	2 cut(s)	68, 1769
HaeIII	GGCC	9 cut(s)	5, 36, 44, 556, 648, 699, 904, 1032, 1600
HgaI	GACGC	5 cut(s)	65, 110, 839, 1337, 1659
HhaI	GCGC	4 cut(s)	67, 660, 1282, 1768
Hin1I	GRCGYC	3 cut(s)	57, 1329, 1792
Hin1II	CATG	6 cut(s)	355, 368, 628, 1084, 1648, 1723
Hin6I	GCGC	4 cut(s)	65, 658, 1280, 1766
HinP1I	GCGC	4 cut(s)	65, 658, 1280, 1766
HphI	GGTGA	8 cut(s)	137, 281, 307, 350, 925, 1140, 1252, 1492
Hpy166II	GTNNAC	7 cut(s)	577, 1074, 1165, 1419, 1564, 1705, 1753
Hpy8I	GTNNAC	7 cut(s)	577, 1074, 1165, 1419, 1564, 1705, 1753
Hpy99I	CGWCG	5 cut(s)	833, 1346, 1495, 1675, 1794
HpyAV	CCTTC	8 cut(s)	46, 442, 710, 860, 985, 1068, 1354, 1477
HpyCH4III	ACNGT	1 cut(s)	1287
HpyCH4IV	ACGT	6 cut(s)	166, 227, 256, 426, 1311, 1458
HpyCH4V	TGCA	5 cut(s)	109, 791, 941, 999, 1753
HpyF10VI	GCNNNNNNNGC	3 cut(s)	689, 839, 1029
HpyF3I	CTNAG	4 cut(s)	134, 246, 671, 948
HpySE526I	ACGT	6 cut(s)	166, 227, 256, 426, 1311, 1458
Hsp92I	GRCGYC	3 cut(s)	57, 1329, 1792
Hsp92II	CATG	6 cut(s)	355, 368, 628, 1084, 1648, 1723
HspAI	GCGC	4 cut(s)	65, 658, 1280, 1766
KroI	GCCGGC	1 cut(s)	40
KroNI	GCCGGC	1 cut(s)	42
KspI	CCGCGG	1 cut(s)	1666
Kzo9I	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
LmnI	GCTCC	8 cut(s)	182, 408, 835, 1132, 1351, 1359, 1639, 1786
Lsp1109I	GCAGC	2 cut(s)	1517, 1755
LweI	GCATC	3 cut(s)	778, 800, 1688
MaeI	CTAG	2 cut(s)	743, 1737
MaeII	ACGT	6 cut(s)	166, 227, 256, 426, 1311, 1458
MaeIII	GTNAC	8 cut(s)	16, 223, 269, 524, 931, 1146, 1232, 1258
MalI	GATC	7 cut(s)	237, 728, 929, 1119, 1488, 1496, 1676
MbiI	CCGCTC	2 cut(s)	276, 1603
MboI	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
MboII	GAAGA	6 cut(s)	245, 380, 817, 1005, 1318, 1633
MflI	RGATCY	2 cut(s)	235, 1486
MhlI	GDGCHC	7 cut(s)	293, 543, 840, 1356, 1504, 1644, 1755
MluCI	AATT	5 cut(s)	308, 360, 371, 874, 1394
MlyI	GAGTC	7 cut(s)	481, 605, 684, 1248, 1266, 1556, 1727
MmeI	TCCRAC	3 cut(s)	430, 1165, 1222
Mph1103I	ATGCAT	1 cut(s)	793
MroNI	GCCGGC	1 cut(s)	40
MseI	TTAA	1 cut(s)	1041
MslI	CAYNNNNRTG	4 cut(s)	1079, 1085, 1406, 1696
MspA1I	CMGCKG	1 cut(s)	1665
MspCI	CTTAAG	1 cut(s)	1040
MspR9I	CCNGG	8 cut(s)	194, 218, 492, 553, 1178, 1448, 1449, 1784
Mva1269I	GAATGC	1 cut(s)	1025
MvaI	CCWGG	2 cut(s)	553, 1178
MvnI	CGCG	4 cut(s)	104, 833, 1280, 1665
MwoI	GCNNNNNNNGC	3 cut(s)	689, 839, 1029
NaeI	GCCGGC	1 cut(s)	42
NciI	CCSGG	6 cut(s)	194, 218, 492, 1448, 1449, 1784
NdeII	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
NgoMIV	GCCGGC	1 cut(s)	40
NlaIII	CATG	6 cut(s)	355, 368, 628, 1084, 1648, 1723
NlaIV	GGNNCC	4 cut(s)	719, 1488, 1692, 1781
NmeAIII	GCCGAG	2 cut(s)	178, 868
NmuCI	GTSAC	6 cut(s)	16, 223, 269, 931, 1146, 1258
NsbI	TGCGCA	1 cut(s)	659
NsiI	ATGCAT	1 cut(s)	793
NspI	RCATGY	1 cut(s)	628
OliI	CACNNNNGTG	1 cut(s)	1406
PaeR7I	CTCGAG	1 cut(s)	1604
PagI	TCATGA	1 cut(s)	364
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 1014, 1602
PctI	GAATGC	1 cut(s)	1025
PdiI	GCCGGC	1 cut(s)	42
PfeI	GAWTC	5 cut(s)	11, 130, 197, 250, 1745
PinAI	ACCGGT	1 cut(s)	935
PkrI	GCNGC	8 cut(s)	383, 647, 1279, 1378, 1532, 1602, 1770, 1773
PleI	GAGTC	7 cut(s)	481, 605, 683, 1247, 1265, 1555, 1727
PpsI	GAGTC	7 cut(s)	481, 605, 683, 1247, 1265, 1555, 1727
Ppu21I	YACGTR	2 cut(s)	228, 427
Psp124BI	GAGCTC	4 cut(s)	293, 840, 1356, 1644
Psp1406I	AACGTT	2 cut(s)	166, 1311
Psp6I	CCWGG	2 cut(s)	551, 1176
PspEI	GGTNACC	1 cut(s)	269
PspGI	CCWGG	2 cut(s)	551, 1176
PspN4I	GGNNCC	4 cut(s)	719, 1488, 1692, 1781
PspPI	GGNCC	6 cut(s)	35, 376, 903, 1174, 1598, 1779
PsrI	GAACNNNNNNTAC	2 cut(s)	449, 481
PsuI	RGATCY	2 cut(s)	235, 1486
RseI	CAYNNNNRTG	4 cut(s)	1079, 1085, 1406, 1696
SacI	GAGCTC	4 cut(s)	293, 840, 1356, 1644
SacII	CCGCGG	1 cut(s)	1666
SaqAI	TTAA	1 cut(s)	1041
SatI	GCNGC	8 cut(s)	382, 646, 1278, 1377, 1531, 1601, 1769, 1772
Sau3AI	GATC	7 cut(s)	235, 726, 927, 1117, 1486, 1494, 1674
Sau96I	GGNCC	6 cut(s)	35, 376, 903, 1174, 1598, 1779
SchI	GAGTC	7 cut(s)	481, 605, 684, 1248, 1266, 1556, 1727
ScrFI	CCNGG	8 cut(s)	194, 218, 492, 553, 1178, 1448, 1449, 1784
SduI	GDGCHC	7 cut(s)	293, 543, 840, 1356, 1504, 1644, 1755
SfaNI	GCATC	3 cut(s)	778, 800, 1688
SfcI	CTRYAG	1 cut(s)	973
Sfr274I	CTCGAG	1 cut(s)	1604
Sfr303I	CCGCGG	1 cut(s)	1666
SgrAI	CRCCGGYG	1 cut(s)	935
SgrBI	CCGCGG	1 cut(s)	1666
SinI	GGWCC	3 cut(s)	376, 1174, 1779
SlaI	CTCGAG	1 cut(s)	1604
SmaI	CCCGGG	1 cut(s)	1449
SmiMI	CAYNNNNRTG	4 cut(s)	1079, 1085, 1406, 1696
SmlI	CTYRAG	3 cut(s)	286, 1040, 1604
SmoI	CTYRAG	3 cut(s)	286, 1040, 1604
SnaBI	TACGTA	1 cut(s)	427
Sse9I	AATT	5 cut(s)	308, 360, 371, 874, 1394
SspMI	CTAG	2 cut(s)	743, 1737
SstI	GAGCTC	4 cut(s)	293, 840, 1356, 1644
StyD4I	CCNGG	8 cut(s)	192, 216, 490, 551, 1176, 1446, 1447, 1782
StyI	CCWWGG	3 cut(s)	60, 893, 1154
TaaI	ACNGT	1 cut(s)	1287
TaiI	ACGT	6 cut(s)	169, 230, 259, 429, 1314, 1461
TaqI	TCGA	8 cut(s)	756, 799, 966, 1101, 1493, 1605, 1635, 1673
TasI	AATT	5 cut(s)	308, 360, 371, 874, 1394
TatI	WGTACW	5 cut(s)	393, 456, 627, 1416, 1683
TauI	GCSGC	6 cut(s)	384, 648, 1280, 1379, 1603, 1774
TfiI	GAWTC	5 cut(s)	11, 130, 197, 250, 1745
Tru1I	TTAA	1 cut(s)	1041
Tru9I	TTAA	1 cut(s)	1041
TscAI	CASTG	4 cut(s)	21, 103, 1504, 1532
TseFI	GTSAC	6 cut(s)	16, 223, 269, 931, 1146, 1258
TseI	GCWGC	2 cut(s)	1530, 1768
Tsp45I	GTSAC	6 cut(s)	16, 223, 269, 931, 1146, 1258
TspGWI	ACGGA	3 cut(s)	195, 1379, 1479
TspMI	CCCGGG	1 cut(s)	1447
TspRI	CASTG	4 cut(s)	21, 103, 1504, 1532
Vha464I	CTTAAG	1 cut(s)	1040
VneI	GTGCAC	1 cut(s)	1751
VpaK11BI	GGWCC	3 cut(s)	376, 1174, 1779
XagI	CCTNNNNNAGG	1 cut(s)	989
XapI	RAATTY	3 cut(s)	308, 874, 1394
XceI	RCATGY	1 cut(s)	628
XcmI	CCANNNNNNNNNTGG	1 cut(s)	217
XhoI	CTCGAG	1 cut(s)	1604
XmaI	CCCGGG	1 cut(s)	1447
XmiI	GTMKAC	2 cut(s)	576, 1164
XspI	CTAG	2 cut(s)	743, 1737
Zsp2I	ATGCAT	1 cut(s)	793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.