Rw2G015090

Indole-3-acetic acid-amido synthetase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
17416225 .. 17418646
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G015090.1

Sequence Viewer

Length: 1800 bp
ATGGCCATTGATTCAGTGACTTCATCCCCTCTGGGCCCACCAGCCACCGAGAAGGACGCCAAGGCGCTTCAGTTCCTAGAGGAGACGACCAAGAACACTGACGCTGTGCAGGAGAGGGTTCTCACTGAGATTCTCAGCCGAAACGCCGAAACCGAGTACCTGAAGCGTTTCGGCCTCAACGGAGCTACTGACCGTGACACGTTCAAGTCCAAAATCCCGGTGGTCACGTATGAAGATCTTCAGCCTGAGATTCAACGTATCGCTAATGGTGACCGCTCTCCCATCTTGAGCTCTCATCCCATCTCTGAATTCCTTACCAGTTCTGGGACTTCAGCCGGTGAGAGAAAACTGATGCCTACGATTCACGAAGAATTGGACCGTCGCACCCTACTGTACAGCTTGCTCCAGCCTGTGATGAATCTTTACGTGCCCGACTTGGACAAGGGAAAGGGATTGTACTTTTTGTTCATCAAGGCCGAGACCAAGACTCCCGGCGGGCTAGTAGCCCGTCCGGTTTTGACGAGTTACTACAAGAGCGAGCACTTCAAGACCAGGCCGTACGACCCCTACAACGTCTACACCAGCCCCAACGAAGCCATTCTCTGCTCCGACTCGTTTCAAAGCATGTACGCCCAAATGCTTTGCGGCCTCATCATGCGCGAGCAAGTCCTCCGCGTAGGGGCGGTCTTCGCCTCCGGCCTACTCCGAGCCATCCGTTTCCTTCAGCTCAACTGGCAGCAACTAGCCGAAGACATCAAAACCGGAATTCTACACCCTAAAATCACAGATGTTTCTATCCGGGAGAAGATGGTGGAGCTTTTGAAACCCGACGCGGAGCTGGCGGAGTTGATCAAAAAGGAGTGTGAAGGAGAGAATTGGGAGGGGATAATCCCCAGGATTTGGCCCAACACGAAGTACCTCGATGTGATAGTCACCGGTGCAATGGCTCAGTACATTCCAACACTGGATTACTACAGCAATAGCCTACCCAAGGCTTGCACAATGTACGCTTCTTCTGAATGCTATTTTGGCCTGAACCTTAAGCCGATGTGCGACCCTTCTGAAGTGTCATACACCATTATGCCGATGATGGGCTATTTCGAGTTCATTCCACACGATCCATCTGCTCCTCCTCTGTCCAAAAAGTCACCTCCAAGGCTCTTAGAGCTTGCTGACCTGGAAGTCGGAAAAGAATACGAGTTGGTCATTTCCACATACGCTGGACTGTGCCGTTACAGAGTCGGAGACATTCTCCAAGTCACCGGCTTCTACAACGCCGCGCCACAGTTCCGGTTTGTGAGGAGGAAGAACGTTTTGCTGAGCATTGACGCCGACAAAACCGACGAGGCGGAGCTCCAAAAAGGCATTGACAACGCCACCGAACTCCTCCGTGAATTCAACACTTCTGTGGTGGAGTACACAAGCTACGCCGACACCAAAACATTCCCAGGACATTACGTCATTTACTGGGAGTTGATGGTGAAGGACCCGTCTATCAGTGCCCCAAGCCACGAGGTTCTTGACCGGTGCTGCCTTGTCATGGAGGAGTCCCTAAACTCTGTGTACCGGCAATACCGAGTGTCTGACAAAACAATCGGGCCGCTCGAAATTAGGGTTGTGAAGAGTGGCACATTCGAGGAGCTCATGGACTACGCCATTTCCCGCGGCGCATCGATTAATCAGTACAAGGCGCCGAGGTGCGTGAACTTCTCACCCATCATGGAGTTGCTGGACTCTAGGGTTGAATCGGTGCACTTCAGCCCGGGGTTGCCACATTGGACCCCGGAGCGACGCCATTGA

Protein Analysis

599

Amino Acids

67.92

Weight (kDa)

5.47

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GH3 PF03321 23 - 330 2.2e-122 GH3 family N-terminal domain
GH3_M PF23571 358 - 435 4.7e-28 GH3 family central domain
GH3_C PF23572 451 - 570 1.4e-37 GH3 family C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015834)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G59500 AT2G23170 AT4G37390
fragaria_vesca FvH4_1g16980
malus_domestica MD02G1180300.v1.1 MD15G1290900.v1.1
prunus_persica Prupe.6G226100_v2.0.a1
pyrus_communis pycom02g14600 pycom15g25440
rosa_laevigata RLG00000017554
rosa_multiflora Rmu_sc0002945.1_g000004
rosa_roxburghii Rroxscaffold_2G00136610
rosa_rugosa Rorug02G0140200
rosa_samantha Rh2CG196000
rosa_wichuraiana Rw2G015090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1181
AccB1I GGYRCC 1 cut(s) 1690
AccB7I CCANNNNNTGG 1 cut(s) 900
AccBSI CCGCTC 2 cut(s) 276, 1603
AccI GTMKAC 1 cut(s) 576
AccII CGCG 5 cut(s) 660, 675, 833, 1280, 1665
AclI AACGTT 1 cut(s) 1311
AclWI GGATC 1 cut(s) 1112
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 308, 765, 1394
AcuI CTGAAG 7 cut(s) 53, 182, 224, 315, 707, 1083, 1741
AcyI GRCGYC 4 cut(s) 57, 1329, 1691, 1792
AfiI CCNNNNNNNGG 6 cut(s) 324, 679, 900, 991, 1091, 1540
AflII CTTAAG 1 cut(s) 1040
AflIII ACRYGT 1 cut(s) 198
AgeI ACCGGT 2 cut(s) 935, 1524
AgsI TTSAA 7 cut(s) 205, 254, 547, 620, 823, 1399, 1745
AhdI GACNNNNNGTC 1 cut(s) 1457
AjnI CCWGG 4 cut(s) 551, 893, 1176, 1447
AjuI GAANNNNNNNTTGG 2 cut(s) 1011, 1043
AleI CACNNNNGTG 1 cut(s) 1406
Alw21I GWGCWC 5 cut(s) 293, 543, 1356, 1644, 1755
Alw26I GTCTC 3 cut(s) 77, 473, 1239
Alw44I GTGCAC 1 cut(s) 1751
AlwI GGATC 1 cut(s) 1112
Ama87I CYCGRG 1 cut(s) 1762
ApaI GGGCCC 1 cut(s) 38
ApaLI GTGCAC 1 cut(s) 1751
ApeKI GCWGC 2 cut(s) 736, 1530
ApoI RAATTY 3 cut(s) 308, 765, 1394
AseI ATTAAT 1 cut(s) 1677
AsiGI ACCGGT 2 cut(s) 935, 1524
Asp700I GAANNNNTTC 3 cut(s) 167, 237, 597
AspLEI GCGC 5 cut(s) 67, 660, 1282, 1670, 1693
AspS9I GGNCC 7 cut(s) 34, 35, 376, 903, 1486, 1598, 1779
AsuC2I CCSGG 6 cut(s) 218, 492, 800, 1763, 1764, 1784
AsuHPI GGTGA 7 cut(s) 281, 350, 925, 1140, 1252, 1492, 1704
AvaI CYCGRG 1 cut(s) 1762
AvaII GGWCC 3 cut(s) 376, 1486, 1779
BaeGI GKGCMC 4 cut(s) 38, 432, 1504, 1755
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 1690
BanII GRGCYC 4 cut(s) 38, 293, 1356, 1644
BauI CACGAG 1 cut(s) 1511
BbsI GAAGAC 2 cut(s) 679, 756
Bbv12I GWGCWC 5 cut(s) 293, 543, 1356, 1644, 1755
BbvI GCAGC 2 cut(s) 748, 1517
BccI CCATC 8 cut(s) 290, 308, 719, 802, 1084, 1129, 1471, 1724
BceAI ACGGC 2 cut(s) 541, 1215
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciT130I CCWGG 4 cut(s) 553, 895, 1178, 1449
BclI TGATCA 1 cut(s) 849
BcnI CCSGG 6 cut(s) 218, 492, 800, 1763, 1764, 1784
BcoDI GTCTC 3 cut(s) 77, 473, 1239
BfaI CTAG 4 cut(s) 77, 500, 743, 1737
BfmI CTRYAG 1 cut(s) 973
BfoI RGCGCY 2 cut(s) 68, 1694
BfrI CTTAAG 1 cut(s) 1040
BglII AGATCT 1 cut(s) 235
BisI GCNGC 6 cut(s) 646, 737, 1278, 1531, 1601, 1666
BlpI GCTNAGC 1 cut(s) 1319
BlsI GCNGC 6 cut(s) 647, 738, 1279, 1532, 1602, 1667
Bme18I GGWCC 3 cut(s) 376, 1486, 1779
BmeRI GACNNNNNGTC 1 cut(s) 1457
BmeT110I CYCGRG 1 cut(s) 1762
BmgT120I GGNCC 7 cut(s) 34, 35, 376, 903, 1486, 1598, 1779
BmiI GGNNCC 4 cut(s) 36, 1488, 1692, 1781
BmrI ACTGGG 1 cut(s) 1477
BmsI GCATC 2 cut(s) 342, 1679
BmuI ACTGGG 1 cut(s) 1477
BpiI GAAGAC 2 cut(s) 679, 756
BplI GAGNNNNNCTC 2 cut(s) 1236, 1268
BpmI CTGGAG 1 cut(s) 389
Bpu1102I GCTNAGC 1 cut(s) 1319
BpuEI CTTGAG 1 cut(s) 307
BpuMI CCSGG 6 cut(s) 218, 492, 800, 1763, 1764, 1784
Bsa29I ATCGAT 1 cut(s) 1673
BsaAI YACGTR 2 cut(s) 228, 427
BsaHI GRCGYC 4 cut(s) 57, 1329, 1691, 1792
BsaI GGTCTC 1 cut(s) 473
BsaWI WCCGGW 5 cut(s) 511, 761, 935, 1290, 1524
BsaXI ACNNNNNCTCC 2 cut(s) 472, 502
Bsc4I CCNNNNNNNGG 6 cut(s) 324, 679, 900, 991, 1091, 1540
Bse118I RCCGGY 5 cut(s) 335, 935, 1262, 1524, 1566
Bse1I ACTGG 4 cut(s) 318, 737, 969, 1472
Bse3DI GCAATG 1 cut(s) 948
BseBI CCWGG 4 cut(s) 553, 895, 1178, 1449
BseCI ATCGAT 1 cut(s) 1673
BseGI GGATG 3 cut(s) 23, 295, 711
BseLI CCNNNNNNNGG 6 cut(s) 324, 679, 900, 991, 1091, 1540
BseMI GCAATG 1 cut(s) 948
BseMII CTCAG 5 cut(s) 117, 148, 237, 962, 1310
BseNI ACTGG 4 cut(s) 318, 737, 969, 1472
BseRI GAGGAG 7 cut(s) 95, 1119, 1122, 1315, 1376, 1559, 1652
BseSI GKGCMC 4 cut(s) 38, 432, 1504, 1755
BseXI GCAGC 2 cut(s) 748, 1517
BsgI GTGCAG 1 cut(s) 128
Bsh1236I CGCG 5 cut(s) 660, 675, 833, 1280, 1665
BshNI GGYRCC 1 cut(s) 1690
BshTI ACCGGT 2 cut(s) 935, 1524
BshVI ATCGAT 1 cut(s) 1673
BsiHKAI GWGCWC 5 cut(s) 293, 543, 1356, 1644, 1755
BsiHKCI CYCGRG 1 cut(s) 1762
BsiWI CGTACG 1 cut(s) 558
BslFI GGGAC 2 cut(s) 340, 1534
BslI CCNNNNNNNGG 6 cut(s) 324, 679, 900, 991, 1091, 1540
BsmAI GTCTC 3 cut(s) 77, 473, 1239
BsmBI CGTCTC 1 cut(s) 77
BsmFI GGGAC 2 cut(s) 340, 1534
BsmI GAATGC 1 cut(s) 1025
Bso31I GGTCTC 1 cut(s) 473
BsoBI CYCGRG 1 cut(s) 1762
Bsp120I GGGCCC 1 cut(s) 34
Bsp1286I GDGCHC 8 cut(s) 38, 293, 432, 543, 1356, 1504, 1644, 1755
Bsp1407I TGTACA 1 cut(s) 393
Bsp143I GATC 3 cut(s) 235, 849, 1117
Bsp1720I GCTNAGC 1 cut(s) 1319
BspCNI CTCAG 5 cut(s) 118, 147, 238, 961, 1311
BspDI ATCGAT 1 cut(s) 1673
BspFNI CGCG 5 cut(s) 660, 675, 833, 1280, 1665
BspLI GGNNCC 4 cut(s) 36, 1488, 1692, 1781
BspPI GGATC 1 cut(s) 1112
BspT107I GGYRCC 1 cut(s) 1690
BspTI CTTAAG 1 cut(s) 1040
BspTNI GGTCTC 1 cut(s) 473
BsrBI CCGCTC 2 cut(s) 276, 1603
BsrDI GCAATG 1 cut(s) 948
BsrFI RCCGGY 5 cut(s) 335, 935, 1262, 1524, 1566
BsrGI TGTACA 1 cut(s) 393
BsrI ACTGG 4 cut(s) 318, 737, 969, 1472
BssAI RCCGGY 5 cut(s) 335, 935, 1262, 1524, 1566
BssMI GATC 3 cut(s) 235, 849, 1117
BssNI GRCGYC 4 cut(s) 57, 1329, 1691, 1792
BssSI CACGAG 1 cut(s) 1511
BssT1I CCWWGG 3 cut(s) 60, 990, 1154
Bst2BI CACGAG 1 cut(s) 1511
Bst2UI CCWGG 4 cut(s) 553, 895, 1178, 1449
Bst4CI ACNGT 5 cut(s) 194, 380, 393, 1227, 1287
Bst6I CTCTTC 1 cut(s) 1616
BstACI GRCGYC 4 cut(s) 57, 1329, 1691, 1792
BstAFI CTTAAG 1 cut(s) 1040
BstAUI TGTACA 1 cut(s) 393
BstBAI YACGTR 2 cut(s) 228, 427
BstC8I GCNNGC 7 cut(s) 401, 497, 539, 662, 840, 997, 1170
BstDEI CTNAG 6 cut(s) 126, 134, 246, 948, 1162, 1319
BstDSI CCRYGG 1 cut(s) 1663
BstEII GGTNACC 1 cut(s) 269
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 3 cut(s) 23, 295, 711
BstFNI CGCG 5 cut(s) 660, 675, 833, 1280, 1665
BstH2I RGCGCY 2 cut(s) 68, 1694
BstHHI GCGC 5 cut(s) 67, 660, 1282, 1670, 1693
BstKTI GATC 3 cut(s) 238, 852, 1120
BstMAI GTCTC 3 cut(s) 77, 473, 1239
BstMBI GATC 3 cut(s) 235, 849, 1117
BstMWI GCNNNNNNNGC 5 cut(s) 689, 733, 839, 1029, 1165
BstNI CCWGG 4 cut(s) 553, 895, 1178, 1449
BstNSI RCATGY 1 cut(s) 628
BstPI GGTNACC 1 cut(s) 269
BstSFI CTRYAG 1 cut(s) 973
BstSLI GKGCMC 4 cut(s) 38, 432, 1504, 1755
BstUI CGCG 5 cut(s) 660, 675, 833, 1280, 1665
BstV1I GCAGC 2 cut(s) 748, 1517
BstV2I GAAGAC 2 cut(s) 679, 756
BstX2I RGATCY 1 cut(s) 235
BstYI RGATCY 1 cut(s) 235
Bsu15I ATCGAT 1 cut(s) 1673
BsuTUI ATCGAT 1 cut(s) 1673
BtgI CCRYGG 1 cut(s) 1663
BtsCI GGATG 3 cut(s) 23, 295, 711
BtsIMutI CAGTG 5 cut(s) 21, 96, 123, 962, 1504
Cac8I GCNNGC 7 cut(s) 401, 497, 539, 662, 840, 997, 1170
CfoI GCGC 5 cut(s) 67, 660, 1282, 1670, 1693
Cfr10I RCCGGY 5 cut(s) 335, 935, 1262, 1524, 1566
Cfr13I GGNCC 7 cut(s) 34, 35, 376, 903, 1486, 1598, 1779
Cfr42I CCGCGG 1 cut(s) 1666
Cfr9I CCCGGG 1 cut(s) 1762
ClaI ATCGAT 1 cut(s) 1673
CseI GACGC 4 cut(s) 65, 110, 839, 1337
CspAI ACCGGT 2 cut(s) 935, 1524
CviAII CATG 5 cut(s) 625, 655, 1540, 1645, 1720
DdeI CTNAG 6 cut(s) 126, 134, 246, 948, 1162, 1319
DinI GGCGCC 1 cut(s) 1692
DpnI GATC 3 cut(s) 237, 851, 1119
DpnII GATC 3 cut(s) 235, 849, 1117
DrdI GACNNNNNNGTC 1 cut(s) 1181
DriI GACNNNNNGTC 1 cut(s) 1457
DseDI GACNNNNNNGTC 1 cut(s) 1181
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1616
Eam1105I GACNNNNNGTC 1 cut(s) 1457
EarI CTCTTC 1 cut(s) 1616
EciI GGCGGA 2 cut(s) 857, 1364
Ecl136II GAGCTC 3 cut(s) 291, 1354, 1642
Eco130I CCWWGG 3 cut(s) 60, 990, 1154
Eco24I GRGCYC 4 cut(s) 38, 293, 1356, 1644
Eco31I GGTCTC 1 cut(s) 473
Eco47I GGWCC 3 cut(s) 376, 1486, 1779
Eco53kI GAGCTC 3 cut(s) 291, 1354, 1642
Eco57I CTGAAG 7 cut(s) 53, 182, 224, 315, 707, 1083, 1741
Eco88I CYCGRG 1 cut(s) 1762
Eco91I GGTNACC 1 cut(s) 269
EcoICRI GAGCTC 3 cut(s) 291, 1354, 1642
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 1486
EcoO65I GGTNACC 1 cut(s) 269
EcoRI GAATTC 3 cut(s) 308, 765, 1394
EcoRII CCWGG 4 cut(s) 551, 893, 1176, 1447
EcoT14I CCWWGG 3 cut(s) 60, 990, 1154
EcoT38I GRGCYC 4 cut(s) 38, 293, 1356, 1644
EgeI GGCGCC 1 cut(s) 1692
EheI GGCGCC 1 cut(s) 1692
ErhI CCWWGG 3 cut(s) 60, 990, 1154
Esp3I CGTCTC 1 cut(s) 77
FaeI CATG 5 cut(s) 628, 658, 1543, 1648, 1723
FaiI YATR 9 cut(s) 231, 626, 656, 1072, 1082, 1216, 1541, 1646, 1721
FaqI GGGAC 2 cut(s) 340, 1534
FatI CATG 5 cut(s) 624, 654, 1539, 1644, 1719
FauI CCCGC 2 cut(s) 488, 1670
FbaI TGATCA 1 cut(s) 849
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 6 cut(s) 646, 737, 1278, 1531, 1601, 1666
FokI GGATG 3 cut(s) 10, 282, 698
FriOI GRGCYC 4 cut(s) 38, 293, 1356, 1644
Fsp4HI GCNGC 6 cut(s) 646, 737, 1278, 1531, 1601, 1666
FspBI CTAG 4 cut(s) 77, 500, 743, 1737
GlaI GCGC 5 cut(s) 66, 659, 1281, 1669, 1692
GluI GCNGC 6 cut(s) 646, 737, 1278, 1531, 1601, 1666
GsuI CTGGAG 1 cut(s) 389
HaeII RGCGCY 2 cut(s) 68, 1694
HgaI GACGC 4 cut(s) 65, 110, 839, 1337
HhaI GCGC 5 cut(s) 67, 660, 1282, 1670, 1693
Hin1I GRCGYC 4 cut(s) 57, 1329, 1691, 1792
Hin1II CATG 5 cut(s) 628, 658, 1543, 1648, 1723
Hin6I GCGC 5 cut(s) 65, 658, 1280, 1668, 1691
HinP1I GCGC 5 cut(s) 65, 658, 1280, 1668, 1691
HphI GGTGA 7 cut(s) 281, 350, 925, 1140, 1252, 1492, 1704
Hpy166II GTNNAC 5 cut(s) 577, 1419, 1564, 1705, 1753
Hpy188I TCNGA 8 cut(s) 307, 610, 707, 1018, 1063, 1187, 1244, 1585
Hpy188III TCNNGA 4 cut(s) 286, 365, 547, 1520
Hpy8I GTNNAC 5 cut(s) 577, 1419, 1564, 1705, 1753
Hpy99I CGWCG 4 cut(s) 384, 833, 1346, 1794
HpyAV CCTTC 5 cut(s) 46, 731, 860, 1068, 1477
HpyCH4III ACNGT 5 cut(s) 194, 380, 393, 1227, 1287
HpyCH4IV ACGT 7 cut(s) 200, 227, 256, 426, 573, 1311, 1458
HpyCH4V TGCA 4 cut(s) 109, 941, 999, 1753
HpyF10VI GCNNNNNNNGC 5 cut(s) 689, 733, 839, 1029, 1165
HpyF3I CTNAG 6 cut(s) 126, 134, 246, 948, 1162, 1319
HpySE526I ACGT 7 cut(s) 200, 227, 256, 426, 573, 1311, 1458
Hsp92I GRCGYC 4 cut(s) 57, 1329, 1691, 1792
Hsp92II CATG 5 cut(s) 628, 658, 1543, 1648, 1723
HspAI GCGC 5 cut(s) 65, 658, 1280, 1668, 1691
KasI GGCGCC 1 cut(s) 1690
Ksp22I TGATCA 1 cut(s) 849
KspI CCGCGG 1 cut(s) 1666
Kzo9I GATC 3 cut(s) 235, 849, 1117
Lsp1109I GCAGC 2 cut(s) 748, 1517
LweI GCATC 2 cut(s) 342, 1679
MaeI CTAG 4 cut(s) 77, 500, 743, 1737
MaeII ACGT 7 cut(s) 200, 227, 256, 426, 573, 1311, 1458
MaeIII GTNAC 9 cut(s) 16, 194, 223, 269, 524, 931, 1146, 1232, 1258
MalI GATC 3 cut(s) 237, 851, 1119
MbiI CCGCTC 2 cut(s) 276, 1603
MboI GATC 3 cut(s) 235, 849, 1117
MboII GAAGA 9 cut(s) 230, 245, 380, 679, 761, 817, 1005, 1318, 1633
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 8 cut(s) 38, 293, 432, 543, 1356, 1504, 1644, 1755
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 6 cut(s) 308, 371, 765, 874, 1394, 1608
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 1691
MlyI GAGTC 5 cut(s) 481, 605, 1248, 1556, 1727
MmeI TCCRAC 4 cut(s) 633, 983, 1165, 1222
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 3 cut(s) 167, 237, 597
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 1041, 1677
MslI CAYNNNNRTG 2 cut(s) 1079, 1406
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1665
MspCI CTTAAG 1 cut(s) 1040
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 4 cut(s) 553, 895, 1178, 1449
MvnI CGCG 5 cut(s) 660, 675, 833, 1280, 1665
MwoI GCNNNNNNNGC 5 cut(s) 689, 733, 839, 1029, 1165
NarI GGCGCC 1 cut(s) 1691
NciI CCSGG 6 cut(s) 218, 492, 800, 1763, 1764, 1784
NdeII GATC 3 cut(s) 235, 849, 1117
NlaIII CATG 5 cut(s) 628, 658, 1543, 1648, 1723
NlaIV GGNNCC 4 cut(s) 36, 1488, 1692, 1781
NmeAIII GCCGAG 2 cut(s) 502, 1719
NmuCI GTSAC 7 cut(s) 16, 194, 223, 269, 931, 1146, 1258
NspI RCATGY 1 cut(s) 628
OliI CACNNNNGTG 1 cut(s) 1406
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 1602
PctI GAATGC 1 cut(s) 1025
PdmI GAANNNNTTC 3 cut(s) 167, 237, 597
PfeI GAWTC 6 cut(s) 11, 130, 250, 361, 418, 1745
Pfl23II CGTACG 1 cut(s) 558
PflMI CCANNNNNTGG 1 cut(s) 900
PfoI TCCNGGA 1 cut(s) 798
PinAI ACCGGT 2 cut(s) 935, 1524
PkrI GCNGC 6 cut(s) 647, 738, 1279, 1532, 1602, 1667
PleI GAGTC 5 cut(s) 481, 605, 1247, 1555, 1727
PluTI GGCGCC 1 cut(s) 1694
PpsI GAGTC 5 cut(s) 481, 605, 1247, 1555, 1727
Ppu21I YACGTR 2 cut(s) 228, 427
PpuMI RGGWCCY 1 cut(s) 1486
PshBI ATTAAT 1 cut(s) 1677
Psp124BI GAGCTC 3 cut(s) 293, 1356, 1644
Psp1406I AACGTT 1 cut(s) 1311
Psp5II RGGWCCY 1 cut(s) 1486
Psp6I CCWGG 4 cut(s) 551, 893, 1176, 1447
PspEI GGTNACC 1 cut(s) 269
PspGI CCWGG 4 cut(s) 551, 893, 1176, 1447
PspLI CGTACG 1 cut(s) 558
PspN4I GGNNCC 4 cut(s) 36, 1488, 1692, 1781
PspOMI GGGCCC 1 cut(s) 34
PspPI GGNCC 7 cut(s) 34, 35, 376, 903, 1486, 1598, 1779
PspPPI RGGWCCY 1 cut(s) 1486
PsrI GAACNNNNNNTAC 2 cut(s) 449, 481
PsuI RGATCY 1 cut(s) 235
RseI CAYNNNNRTG 2 cut(s) 1079, 1406
SacI GAGCTC 3 cut(s) 293, 1356, 1644
SacII CCGCGG 1 cut(s) 1666
SaqAI TTAA 2 cut(s) 1041, 1677
SatI GCNGC 6 cut(s) 646, 737, 1278, 1531, 1601, 1666
Sau3AI GATC 3 cut(s) 235, 849, 1117
Sau96I GGNCC 7 cut(s) 34, 35, 376, 903, 1486, 1598, 1779
SchI GAGTC 5 cut(s) 481, 605, 1248, 1556, 1727
SduI GDGCHC 8 cut(s) 38, 293, 432, 543, 1356, 1504, 1644, 1755
SfaNI GCATC 2 cut(s) 342, 1679
SfcI CTRYAG 1 cut(s) 973
SfoI GGCGCC 1 cut(s) 1692
Sfr303I CCGCGG 1 cut(s) 1666
SgrAI CRCCGGYG 1 cut(s) 935
SgrBI CCGCGG 1 cut(s) 1666
SinI GGWCC 3 cut(s) 376, 1486, 1779
SmaI CCCGGG 1 cut(s) 1764
SmiMI CAYNNNNRTG 2 cut(s) 1079, 1406
SmlI CTYRAG 2 cut(s) 286, 1040
SmoI CTYRAG 2 cut(s) 286, 1040
Sse9I AATT 6 cut(s) 308, 371, 765, 874, 1394, 1608
SspDI GGCGCC 1 cut(s) 1690
SspMI CTAG 4 cut(s) 77, 500, 743, 1737
SstI GAGCTC 3 cut(s) 293, 1356, 1644
StyI CCWWGG 3 cut(s) 60, 990, 1154
TaaI ACNGT 5 cut(s) 194, 380, 393, 1227, 1287
TaiI ACGT 7 cut(s) 203, 230, 259, 429, 576, 1314, 1461
TaqI TCGA 5 cut(s) 921, 1101, 1605, 1635, 1673
TasI AATT 6 cut(s) 308, 371, 765, 874, 1394, 1608
TatI WGTACW 5 cut(s) 393, 456, 951, 1416, 1683
TauI GCSGC 4 cut(s) 648, 1280, 1603, 1668
TfiI GAWTC 6 cut(s) 11, 130, 250, 361, 418, 1745
Tru1I TTAA 2 cut(s) 1041, 1677
Tru9I TTAA 2 cut(s) 1041, 1677
TscAI CASTG 5 cut(s) 21, 103, 130, 969, 1504
TseFI GTSAC 7 cut(s) 16, 194, 223, 269, 931, 1146, 1258
TseI GCWGC 2 cut(s) 736, 1530
Tsp45I GTSAC 7 cut(s) 16, 194, 223, 269, 931, 1146, 1258
TspDTI ATGAA 5 cut(s) 12, 246, 431, 457, 1096
TspGWI ACGGA 3 cut(s) 195, 704, 1379
TspMI CCCGGG 1 cut(s) 1762
TspRI CASTG 5 cut(s) 21, 103, 130, 969, 1504
Van91I CCANNNNNTGG 1 cut(s) 900
Vha464I CTTAAG 1 cut(s) 1040
VneI GTGCAC 1 cut(s) 1751
VpaK11BI GGWCC 3 cut(s) 376, 1486, 1779
VspI ATTAAT 1 cut(s) 1677
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 3 cut(s) 308, 765, 1394
XceI RCATGY 1 cut(s) 628
XcmI CCANNNNNNNNNTGG 1 cut(s) 217
XmaI CCCGGG 1 cut(s) 1762
XmiI GTMKAC 1 cut(s) 576
XmnI GAANNNNTTC 3 cut(s) 167, 237, 597
XspI CTAG 4 cut(s) 77, 500, 743, 1737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.