FvH4_1g20250

LMBR1 domain-containing protein 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0008090
Physical Location & Seq
Reverse (-)
12484322 .. 12492379
8058 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g20250.t2

Sequence Viewer

Length: 2157 bp
ATGTGGGTTTTCTACCTGATCTCGCTGCCCCTGACCTTGGGGATGGTCCTGATCACGCTCCGCTACTTCGCCGGCCCGGAGGTCCCTCGCTACGTCGCCCTCACCGTCGGATACACCTGGTTCTGCTCTCTCTCCATCATCGTCATTGTCCCCGCCGACATCTGGACGACGATAAATCATGTCGAGAGTAGAGGAATTTCTTTCTTTTGGGGCTGGTCCTATTGGAGTACATTTCTACTAACTTGGACTGTGGTGCCCCTTATTCAGGGCTTTGAAGATGCTGGAGACTTCACCATGACTGAGAGATTGAAGACTAGTGTACATGTTAACTTAGTCTTTTATCTGATTCTCGGAGCTATTGGCTTCATTGGACTAATTGTCCTCATCATGATGCACAATCATTGGAGTGGAAGTCTACTAGGTTTTGCCATGGCTTGCTCCAATACTTTTGGACTTGTTACTGGGGCATTTCTTCTTGGGTTTGGTTTGAGTGAAATTCCAAAGGGACTTTGGAGAAATGCAGATTGGACTACGCGTCAAAAAGTACTTTCTCATAAAATTGCTAAAATGGCTGTCAAACTTGATGACGCTCATCAAGAACTTTCAAATGCTATTGTGGTCGCCCAGGCAACATCCACACAGATGTCAAAGCGTGATCCTTTAAGATCCTACATGGATATTATTGACAATATGTTAGCTCAGCTGTTTAGAGAAGATCCATCCTTTAAACCACAAGGTGGCCGATTAGGCGAAAATGATATGGACTATGATACTGATGAAAAATCAATGGCTACACTTCGGCGTCATCTCCGGAGAACCAAGGAAGAGTATTACCGGTACAAAAGTGAGTATATGACCTATGTTACAGAGGCCCTTGAACTTGAAGATACAGTAAAGAATTACGAACGCCGCAGTTCTACTGGATGGAAATTTATTTCAAGCTTCAGACCTACACGATCTGGAAGATTTGGACCTTCCATCGATACAATAGAATTCTTGTGGCGCTGTATAGTTAGAAAACAACTTGAGAAAGTTTTGGCTATCCTACTCGGTATCATTTCAGCCGCAATTCTTTTAGCTGAAGCAACACTACTTCCTAGAGTTGATCTATCTCTTTTCTCTATTCTCATCAATGCTGTTGGAAAGCAAGAGGTTCTTGTGCAGGTATTTGCTTTTGTTCCTCTGATGTATATGTGCATCTGCACATACTATTCCTTGTTCAAAATTGGCATGTTGATGTTTTACTCATTAACACCCAGGCAAACAAGCTCGGTTAACTTGCTTATGATATGCTCGATGGTCGCTCGTTATGCTCCTCCAGTTTCTTACAACTTTCTCAACCTCATTCGTCTTGGTGATCAAAAAACTATATTTGAAAAGAAAATGGGAAACATTGATCAAGCTGTCCCATTCTTTGGGAGTGAGTTTAACAGAATCTATCCACTTATCATGGTTGTGTACACCCTGCTGGTTGCTAGCAATTTCTTTGACCGCATAATTGATTTTTTCGGGAGCTGGAAGCGATTTAAATTTCAAACCGAAGTTGATGATACAGATGGTTTCGATCCATCTGGATTAATAATTTTGCAAAAAGAACGAACTTGGGCGGAACAAGGTTGCAAAGTTGGGGAGCATGTCATTCCCTTGGCTAGGAATTTCAATGGCGCGGATGTCGAGTCTGGAAGCAATATCATGGAAATGAAAACAACAACTAATTTAATGACTGATGCTGGAAGTGGAACTCCCTCAAAGTCAGTGACAGAAGAATCTCGTAGATATAGCTCAAGCAAAGAAGCCATCTCGAGCAAGTATGCTGCCATTAGAGAGCAGAGCAGACAAGGGTCATTCAATAAAAATCCGGAGAAGAATATTATTGCTTCCGCCAAGGTCTCATTGCTTGATGCAGCTAACCCTGATAACACAATAGAAGGGTCGCCTACTGGCTTGGCCTCAAAGTGGGTATCCATGAAAAATGGTTTTCAAAATTTCAAAGCCAACATAGCAGCCAAAAAATTTATTCCCCTGCGCCAAGTTCAAGAAACTGTAGATATGTCACGTGGTTCTTCTTCCGAGTCTCTTGATGATATATTTCAGAAACTGAAACGGCCCCCTTCAGACCATGTGGGCTATGATGATGAGGATGGAGATGGCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LMBR1

Protein Analysis

719

Amino Acids

81.23

Weight (kDa)

7.98

Isoelectric Point (pI)

41.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LMBR1 PF04791 3 - 397 2.3e-74 LMBR1-like membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1153
AccB1I GGYRCC 1 cut(s) 253
AccB7I CCANNNNNTGG 2 cut(s) 737, 1415
AccI GTMKAC 1 cut(s) 415
AccII CGCG 2 cut(s) 535, 1667
AccIII TCCGGA 2 cut(s) 810, 1858
AciI CCGC 8 cut(s) 61, 153, 910, 1065, 1492, 1607, 1667, 1881
AclWI GGATC 4 cut(s) 650, 660, 710, 1559
AcoI YGGCCR 1 cut(s) 739
AcsI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1984, 2012
AcuI CTGAAG 3 cut(s) 928, 1101, 2097
AcvI CACGTG 1 cut(s) 2057
AcyI GRCGYC 1 cut(s) 802
AdeI CACNNNGTG 1 cut(s) 737
AfaI GTAC 5 cut(s) 229, 321, 546, 839, 1460
AfiI CCNNNNNNNGG 7 cut(s) 37, 162, 265, 737, 1415, 1650, 1956
AflIII ACRYGT 2 cut(s) 322, 533
AgeI ACCGGT 1 cut(s) 834
AhdI GACNNNNNGTC 2 cut(s) 377, 534
AhlI ACTAGT 1 cut(s) 314
AjnI CCWGG 3 cut(s) 116, 624, 1256
AjuI GAANNNNNNNTTGG 2 cut(s) 508, 540
Alw26I GTCTC 3 cut(s) 279, 1894, 2079
AlwI GGATC 4 cut(s) 650, 660, 710, 1559
AlwNI CAGNNNCTG 1 cut(s) 2098
Ama87I CYCGRG 1 cut(s) 1801
Aor13HI TCCGGA 2 cut(s) 810, 1858
AoxI GGCC 5 cut(s) 73, 739, 870, 1947, 2105
ApeKI GCWGC 4 cut(s) 25, 1814, 1904, 2003
ApoI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1984, 2012
AseI ATTAAT 1 cut(s) 1577
AsiGI ACCGGT 1 cut(s) 834
AspLEI GCGC 3 cut(s) 1005, 1667, 2028
AspS9I GGNCC 7 cut(s) 46, 74, 82, 216, 871, 971, 2106
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 3 cut(s) 94, 283, 1367
AsuNHI GCTAGC 1 cut(s) 1475
AvaI CYCGRG 1 cut(s) 1801
AvaII GGWCC 4 cut(s) 46, 82, 216, 971
BaeGI GKGCMC 1 cut(s) 258
BaeI ACNNNNGTAYC 2 cut(s) 829, 862
BanI GGYRCC 1 cut(s) 253
BarI GAAGNNNNNNTAC 2 cut(s) 1074, 1106
BbrPI CACGTG 1 cut(s) 2057
BbsI GAAGAC 1 cut(s) 317
BbvI GCAGC 4 cut(s) 12, 1801, 1916, 2015
BceAI ACGGC 1 cut(s) 2120
BciT130I CCWGG 3 cut(s) 118, 626, 1258
BciVI GTATCC 2 cut(s) 104, 1972
BclI TGATCA 3 cut(s) 51, 1357, 1396
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 3 cut(s) 279, 1894, 2079
BcuI ACTAGT 1 cut(s) 314
BfaI CTAG 5 cut(s) 315, 419, 1098, 1476, 1650
BfmI CTRYAG 1 cut(s) 2043
BfoI RGCGCY 1 cut(s) 1006
BfuAI ACCTGC 1 cut(s) 1153
BfuI GTATCC 2 cut(s) 104, 1972
BglI GCCNNNNNGGC 1 cut(s) 747
BisI GCNGC 6 cut(s) 26, 910, 1065, 1815, 1905, 2004
BlpI GCTNAGC 1 cut(s) 699
BlsI GCNGC 6 cut(s) 27, 911, 1066, 1816, 1906, 2005
BmcAI AGTACT 1 cut(s) 546
Bme1390I CCNGG 4 cut(s) 77, 118, 626, 1258
Bme18I GGWCC 4 cut(s) 46, 82, 216, 971
BmeRI GACNNNNNGTC 2 cut(s) 377, 534
BmeT110I CYCGRG 1 cut(s) 1801
BmgT120I GGNCC 7 cut(s) 46, 74, 82, 216, 871, 971, 2106
BmiI GGNNCC 3 cut(s) 84, 255, 2108
BmrFI CCNGG 4 cut(s) 77, 118, 626, 1258
BmrI ACTGGG 1 cut(s) 471
BmsI GCATC 5 cut(s) 268, 381, 1206, 1717, 1891
BmtI GCTAGC 1 cut(s) 1479
BmuI ACTGGG 1 cut(s) 471
BoxI GACNNNNGTC 1 cut(s) 1840
BpiI GAAGAC 1 cut(s) 317
BpmI CTGGAG 2 cut(s) 303, 1302
Bpu1102I GCTNAGC 1 cut(s) 699
BpuEI CTTGAG 2 cut(s) 1046, 1768
BpuMI CCSGG 1 cut(s) 77
Bsa29I ATCGAT 1 cut(s) 981
BsaAI YACGTR 1 cut(s) 2057
BsaHI GRCGYC 1 cut(s) 802
BsaI GGTCTC 1 cut(s) 1894
BsaJI CCNNGG 7 cut(s) 36, 429, 624, 819, 1256, 1644, 1884
BsaWI WCCGGW 3 cut(s) 810, 834, 1858
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 7 cut(s) 37, 162, 265, 737, 1415, 1650, 1956
Bse118I RCCGGY 2 cut(s) 71, 834
Bse1I ACTGG 4 cut(s) 466, 925, 1319, 1945
Bse3DI GCAATG 1 cut(s) 1892
BseAI TCCGGA 2 cut(s) 810, 1858
BseBI CCWGG 3 cut(s) 118, 626, 1258
BseCI ATCGAT 1 cut(s) 981
BseDI CCNNGG 7 cut(s) 36, 429, 624, 819, 1256, 1644, 1884
BseGI GGATG 6 cut(s) 48, 632, 719, 929, 1675, 2146
BseLI CCNNNNNNNGG 7 cut(s) 37, 162, 265, 737, 1415, 1650, 1956
BseMI GCAATG 1 cut(s) 1892
BseMII CTCAG 2 cut(s) 291, 713
BseNI ACTGG 4 cut(s) 466, 925, 1319, 1945
BseRI GAGGAG 1 cut(s) 1305
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 4 cut(s) 12, 1801, 1916, 2015
BsgI GTGCAG 2 cut(s) 1181, 1186
Bsh1236I CGCG 2 cut(s) 535, 1667
BshFI GGCC 5 cut(s) 75, 741, 872, 1949, 2107
BshNI GGYRCC 1 cut(s) 253
BshTI ACCGGT 1 cut(s) 834
BshVI ATCGAT 1 cut(s) 981
BsiHKCI CYCGRG 1 cut(s) 1801
BsiSI CCGG 5 cut(s) 72, 77, 811, 835, 1859
BslFI GGGAC 4 cut(s) 68, 134, 519, 1391
BslI CCNNNNNNNGG 7 cut(s) 37, 162, 265, 737, 1415, 1650, 1956
BsmAI GTCTC 3 cut(s) 279, 1894, 2079
BsmFI GGGAC 4 cut(s) 68, 134, 519, 1391
BsnI GGCC 5 cut(s) 75, 741, 872, 1949, 2107
Bso31I GGTCTC 1 cut(s) 1894
BsoBI CYCGRG 1 cut(s) 1801
Bsp1286I GDGCHC 1 cut(s) 258
Bsp13I TCCGGA 2 cut(s) 810, 1858
Bsp1407I TGTACA 2 cut(s) 319, 1458
Bsp1720I GCTNAGC 1 cut(s) 699
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 8 cut(s) 61, 153, 910, 1065, 1492, 1607, 1667, 1881
BspANI GGCC 5 cut(s) 75, 741, 872, 1949, 2107
BspCNI CTCAG 2 cut(s) 292, 712
BspDI ATCGAT 1 cut(s) 981
BspEI TCCGGA 2 cut(s) 810, 1858
BspFNI CGCG 2 cut(s) 535, 1667
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 3 cut(s) 84, 255, 2108
BspMI ACCTGC 1 cut(s) 1153
BspOI GCTAGC 1 cut(s) 1479
BspPI GGATC 4 cut(s) 650, 660, 710, 1559
BspT107I GGYRCC 1 cut(s) 253
BspTNI GGTCTC 1 cut(s) 1894
BsrDI GCAATG 1 cut(s) 1892
BsrFI RCCGGY 2 cut(s) 71, 834
BsrGI TGTACA 2 cut(s) 319, 1458
BsrI ACTGG 4 cut(s) 466, 925, 1319, 1945
BssAI RCCGGY 2 cut(s) 71, 834
BssECI CCNNGG 7 cut(s) 36, 429, 624, 819, 1256, 1644, 1884
BssNI GRCGYC 1 cut(s) 802
BssT1I CCWWGG 5 cut(s) 36, 429, 819, 1644, 1884
Bst2UI CCWGG 3 cut(s) 118, 626, 1258
Bst4CI ACNGT 4 cut(s) 106, 250, 892, 2044
Bst6I CTCTTC 1 cut(s) 819
BstACI GRCGYC 1 cut(s) 802
BstAUI TGTACA 2 cut(s) 319, 1458
BstBAI YACGTR 1 cut(s) 2057
BstC8I GCNNGC 3 cut(s) 73, 436, 1477
BstDEI CTNAG 3 cut(s) 300, 331, 699
BstDSI CCRYGG 1 cut(s) 429
BstENI CCTNNNNNAGG 2 cut(s) 263, 1648
BstF5I GGATG 6 cut(s) 48, 632, 719, 929, 1675, 2146
BstFNI CGCG 2 cut(s) 535, 1667
BstH2I RGCGCY 1 cut(s) 1006
BstHHI GCGC 3 cut(s) 1005, 1667, 2028
BstMAI GTCTC 3 cut(s) 279, 1894, 2079
BstMWI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2000
BstNI CCWGG 3 cut(s) 118, 626, 1258
BstNSI RCATGY 4 cut(s) 326, 1234, 1637, 2155
BstPAI GACNNNNGTC 1 cut(s) 1840
BstSCI CCNGG 4 cut(s) 75, 116, 624, 1256
BstSFI CTRYAG 1 cut(s) 2043
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 2 cut(s) 535, 1667
BstV1I GCAGC 4 cut(s) 12, 1801, 1916, 2015
BstV2I GAAGAC 1 cut(s) 317
BstX2I RGATCY 2 cut(s) 665, 715
BstYI RGATCY 2 cut(s) 665, 715
Bsu15I ATCGAT 1 cut(s) 981
BsuI GTATCC 2 cut(s) 104, 1972
BsuRI GGCC 5 cut(s) 75, 741, 872, 1949, 2107
BsuTUI ATCGAT 1 cut(s) 981
BtgI CCRYGG 1 cut(s) 429
BtsCI GGATG 6 cut(s) 48, 632, 719, 929, 1675, 2146
BtsIMutI CAGTG 1 cut(s) 1761
BveI ACCTGC 1 cut(s) 1153
Cac8I GCNNGC 3 cut(s) 73, 436, 1477
CaiI CAGNNNCTG 1 cut(s) 2098
CciI TCATGA 1 cut(s) 387
CfoI GCGC 3 cut(s) 1005, 1667, 2028
Cfr10I RCCGGY 2 cut(s) 71, 834
Cfr13I GGNCC 7 cut(s) 46, 74, 82, 216, 871, 971, 2106
ClaI ATCGAT 1 cut(s) 981
CseI GACGC 3 cut(s) 524, 596, 791
CsiI ACCWGGT 1 cut(s) 116
Csp6I GTAC 5 cut(s) 228, 320, 545, 838, 1459
CspAI ACCGGT 1 cut(s) 834
CviQI GTAC 5 cut(s) 228, 320, 545, 838, 1459
DdeI CTNAG 3 cut(s) 300, 331, 699
DraI TTTAAA 2 cut(s) 727, 1528
DraIII CACNNNGTG 1 cut(s) 737
DriI GACNNNNNGTC 2 cut(s) 377, 534
EaeI YGGCCR 1 cut(s) 739
Eam1104I CTCTTC 1 cut(s) 819
Eam1105I GACNNNNNGTC 2 cut(s) 377, 534
EarI CTCTTC 1 cut(s) 819
EciI GGCGGA 2 cut(s) 1622, 1870
Eco130I CCWWGG 5 cut(s) 36, 429, 819, 1644, 1884
Eco31I GGTCTC 1 cut(s) 1894
Eco47I GGWCC 4 cut(s) 46, 82, 216, 971
Eco57I CTGAAG 3 cut(s) 928, 1101, 2097
Eco72I CACGTG 1 cut(s) 2057
Eco88I CYCGRG 1 cut(s) 1801
EcoNI CCTNNNNNAGG 2 cut(s) 263, 1648
EcoO109I RGGNCCY 2 cut(s) 82, 871
EcoRI GAATTC 1 cut(s) 992
EcoRII CCWGG 3 cut(s) 116, 624, 1256
EcoT14I CCWWGG 5 cut(s) 36, 429, 819, 1644, 1884
ErhI CCWWGG 5 cut(s) 36, 429, 819, 1644, 1884
FalI AAGNNNNNCTT 2 cut(s) 1140, 1172
FaqI GGGAC 4 cut(s) 68, 134, 519, 1391
FauI CCCGC 1 cut(s) 160
FbaI TGATCA 3 cut(s) 51, 1357, 1396
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 6 cut(s) 26, 910, 1065, 1815, 1905, 2004
FokI GGATG 6 cut(s) 55, 619, 706, 936, 1682, 2153
Fsp4HI GCNGC 6 cut(s) 26, 910, 1065, 1815, 1905, 2004
FspBI CTAG 5 cut(s) 315, 419, 1098, 1476, 1650
GlaI GCGC 3 cut(s) 1004, 1666, 2027
GluI GCNGC 6 cut(s) 26, 910, 1065, 1815, 1905, 2004
GsuI CTGGAG 2 cut(s) 303, 1302
HaeII RGCGCY 1 cut(s) 1006
HaeIII GGCC 5 cut(s) 75, 741, 872, 1949, 2107
HapII CCGG 5 cut(s) 72, 77, 811, 835, 1859
HgaI GACGC 3 cut(s) 524, 596, 791
HhaI GCGC 3 cut(s) 1005, 1667, 2028
Hin1I GRCGYC 1 cut(s) 802
Hin6I GCGC 3 cut(s) 1003, 1665, 2026
HinP1I GCGC 3 cut(s) 1003, 1665, 2026
HincII GTYRAC 2 cut(s) 328, 1276
HindII GTYRAC 2 cut(s) 328, 1276
HindIII AAGCTT 1 cut(s) 940
HinfI GANTC 5 cut(s) 346, 1434, 1676, 1766, 2072
HpaI GTTAAC 2 cut(s) 328, 1276
HpaII CCGG 5 cut(s) 72, 77, 811, 835, 1859
HphI GGTGA 3 cut(s) 94, 283, 1367
Hpy166II GTNNAC 6 cut(s) 320, 328, 416, 1276, 1459, 1461
Hpy188I TCNGA 8 cut(s) 110, 345, 353, 947, 1185, 2071, 2094, 2116
Hpy8I GTNNAC 6 cut(s) 320, 328, 416, 1276, 1459, 1461
Hpy99I CGWCG 3 cut(s) 98, 110, 172
HpyAV CCTTC 3 cut(s) 984, 1922, 2121
HpyCH4III ACNGT 4 cut(s) 106, 250, 892, 2044
HpyCH4IV ACGT 2 cut(s) 93, 2056
HpyCH4V TGCA 8 cut(s) 394, 521, 1162, 1197, 1203, 1588, 1620, 1904
HpyF10VI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2000
HpyF3I CTNAG 3 cut(s) 300, 331, 699
HpySE526I ACGT 2 cut(s) 93, 2056
Hsp92I GRCGYC 1 cut(s) 802
HspAI GCGC 3 cut(s) 1003, 1665, 2026
Kpn2I TCCGGA 2 cut(s) 810, 1858
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Ksp22I TGATCA 3 cut(s) 51, 1357, 1396
KspAI GTTAAC 2 cut(s) 328, 1276
LmnI GCTCC 6 cut(s) 63, 353, 443, 1318, 1512, 1630
Lsp1109I GCAGC 4 cut(s) 12, 1801, 1916, 2015
LweI GCATC 5 cut(s) 268, 381, 1206, 1717, 1891
MabI ACCWGGT 1 cut(s) 116
MaeI CTAG 5 cut(s) 315, 419, 1098, 1476, 1650
MaeII ACGT 2 cut(s) 93, 2056
MaeIII GTNAC 4 cut(s) 457, 862, 1756, 2052
MflI RGATCY 2 cut(s) 665, 715
MhlI GDGCHC 1 cut(s) 258
MluI ACGCGT 1 cut(s) 533
MlyI GAGTC 2 cut(s) 1685, 2081
MmeI TCCRAC 2 cut(s) 88, 1120
MroI TCCGGA 2 cut(s) 810, 1858
MroNI GCCGGC 1 cut(s) 71
MseI TTAA 9 cut(s) 327, 662, 726, 1250, 1275, 1428, 1527, 1577, 1718
MslI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1454, 1697
MspA1I CMGCKG 1 cut(s) 703
MspI CCGG 5 cut(s) 72, 77, 811, 835, 1859
MspR9I CCNGG 4 cut(s) 77, 118, 626, 1258
MvaI CCWGG 3 cut(s) 118, 626, 1258
MvnI CGCG 2 cut(s) 535, 1667
MwoI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2000
NaeI GCCGGC 1 cut(s) 73
NciI CCSGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 429
NgoMIV GCCGGC 1 cut(s) 71
NheI GCTAGC 1 cut(s) 1475
NlaIV GGNNCC 3 cut(s) 84, 255, 2108
NmuCI GTSAC 2 cut(s) 1756, 2052
NspI RCATGY 4 cut(s) 326, 1234, 1637, 2155
PaeR7I CTCGAG 1 cut(s) 1801
PagI TCATGA 1 cut(s) 387
PciI ACATGT 1 cut(s) 322
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PdiI GCCGGC 1 cut(s) 73
PfeI GAWTC 3 cut(s) 346, 1434, 1766
PflMI CCANNNNNTGG 2 cut(s) 737, 1415
PinAI ACCGGT 1 cut(s) 834
PkrI GCNGC 6 cut(s) 27, 911, 1066, 1816, 1906, 2005
PleI GAGTC 2 cut(s) 1684, 2080
PmaCI CACGTG 1 cut(s) 2057
PmlI CACGTG 1 cut(s) 2057
PpsI GAGTC 2 cut(s) 1684, 2080
Ppu21I YACGTR 1 cut(s) 2057
PpuMI RGGWCCY 1 cut(s) 82
PscI ACATGT 1 cut(s) 322
PshAI GACNNNNGTC 1 cut(s) 1840
PshBI ATTAAT 1 cut(s) 1577
Psp5II RGGWCCY 1 cut(s) 82
Psp6I CCWGG 3 cut(s) 116, 624, 1256
PspCI CACGTG 1 cut(s) 2057
PspGI CCWGG 3 cut(s) 116, 624, 1256
PspN4I GGNNCC 3 cut(s) 84, 255, 2108
PspPI GGNCC 7 cut(s) 46, 74, 82, 216, 871, 971, 2106
PspPPI RGGWCCY 1 cut(s) 82
PstNI CAGNNNCTG 1 cut(s) 2098
PsuI RGATCY 2 cut(s) 665, 715
PvuII CAGCTG 1 cut(s) 703
RsaI GTAC 5 cut(s) 229, 321, 546, 839, 1460
RsaNI GTAC 5 cut(s) 228, 320, 545, 838, 1459
RseI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1454, 1697
SaqAI TTAA 9 cut(s) 327, 662, 726, 1250, 1275, 1428, 1527, 1577, 1718
SatI GCNGC 6 cut(s) 26, 910, 1065, 1815, 1905, 2004
Sau96I GGNCC 7 cut(s) 46, 74, 82, 216, 871, 971, 2106
ScaI AGTACT 1 cut(s) 546
SchI GAGTC 2 cut(s) 1685, 2081
ScrFI CCNGG 4 cut(s) 77, 118, 626, 1258
SduI GDGCHC 1 cut(s) 258
SexAI ACCWGGT 1 cut(s) 116
SfaNI GCATC 5 cut(s) 268, 381, 1206, 1717, 1891
SfcI CTRYAG 1 cut(s) 2043
Sfr274I CTCGAG 1 cut(s) 1801
SinI GGWCC 4 cut(s) 46, 82, 216, 971
SlaI CTCGAG 1 cut(s) 1801
SmiI ATTTAAAT 1 cut(s) 1528
SmiMI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1454, 1697
SmlI CTYRAG 3 cut(s) 1025, 1783, 1801
SmoI CTYRAG 3 cut(s) 1025, 1783, 1801
SpeI ACTAGT 1 cut(s) 314
SsiI CCGC 8 cut(s) 61, 153, 910, 1065, 1492, 1607, 1667, 1881
SspI AATATT 1 cut(s) 1870
SspMI CTAG 5 cut(s) 315, 419, 1098, 1476, 1650
StyD4I CCNGG 4 cut(s) 75, 116, 624, 1256
StyI CCWWGG 5 cut(s) 36, 429, 819, 1644, 1884
SwaI ATTTAAAT 1 cut(s) 1528
TaaI ACNGT 4 cut(s) 106, 250, 892, 2044
TaiI ACGT 2 cut(s) 96, 2059
TaqI TCGA 6 cut(s) 183, 981, 1295, 1563, 1674, 1802
TatI WGTACW 4 cut(s) 227, 319, 544, 1458
TauI GCSGC 2 cut(s) 912, 1067
TfiI GAWTC 3 cut(s) 346, 1434, 1766
Tru1I TTAA 9 cut(s) 327, 662, 726, 1250, 1275, 1428, 1527, 1577, 1718
Tru9I TTAA 9 cut(s) 327, 662, 726, 1250, 1275, 1428, 1527, 1577, 1718
TscAI CASTG 1 cut(s) 1761
TseFI GTSAC 2 cut(s) 1756, 2052
TseI GCWGC 4 cut(s) 25, 1814, 1904, 2003
Tsp45I GTSAC 2 cut(s) 1756, 2052
TspDTI ATGAA 4 cut(s) 355, 792, 1715, 1982
TspRI CASTG 1 cut(s) 1761
Van91I CCANNNNNTGG 2 cut(s) 737, 1415
VpaK11BI GGWCC 4 cut(s) 46, 82, 216, 971
VspI ATTAAT 1 cut(s) 1577
XagI CCTNNNNNAGG 2 cut(s) 263, 1648
XapI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1984, 2012
XceI RCATGY 4 cut(s) 326, 1234, 1637, 2155
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XhoI CTCGAG 1 cut(s) 1801
XmiI GTMKAC 1 cut(s) 415
XspI CTAG 5 cut(s) 315, 419, 1098, 1476, 1650
ZrmI AGTACT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.