Rroxscaffold_2G00131480

LMBR1 domain-containing protein 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0008090
Physical Location & Seq
Forward (+)
68115964 .. 68123305
7342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00131480.1

Sequence Viewer

Length: 2187 bp
ATGTGGGTGTTCTACCTGATCTCGCTGCCCCTGACCTTGGGGATGGTCCTGATTACGCTCCGCTACTTCGCCGGCCCGGAGGTCCCTCGCTACGTGTTGCTTACCGTCGGATACACCTGGTTCTGCTCTCTCTCCATCATCGTCATTGTCCCCGCCGACATCTGGACGACGATTAATCATGTCGAGAGTGGAGGAATTTCGTTCTTTTGGGGCTGGTCGTACTGGAGTACATTTTTACTTACTTGGACTGTGGTGCCCCTTATTCAGGGTTTTGAAGATGCTGGAGACTTCACCATGACAGAGAGATTGAAGACTAGTGTACATGTTAACTTAGTCTTCTATCTAATTCTCGGAGCTATTGGCGTCATTGGACTAATTCTCCTCATCATGATGCACAAGCATTGGAGTGGAAGTCTTCTAGGTTTTGCCATGGCTTGCTCCAATACTTTTGGACTTGTTACGGGCGCATTTCTTCTTGGCTTTGGTTTGAGTGAAATTCCAAAGGGACTTTGGAAAAATGCAGATTGGACTACCCGCCAAAAAGTTCTATCTCATAAAATTGCTAAAATGGCTGTCAAACTTGACGATGCTCATCAAGAACTTTCAAATGCTATTGTGGTCGCCCAGGCAACATCCACTCAGATGTCCAAGCGTGATCCTTTAAGACCCTACATGGATATTATTGACAATATGTTAGCTCAGCTGTTTAAAGAAGATCCATCCTTTAAACCACAAGGTGGCCGATTAGGCGAAAATGATATGGACTATGATACTGATGAAAAATCAATGGCAACACTTCGGCGTCATCTTCGAGGAACCAAGGAAGAGTATTACCGGTACAAAAGTGAGTATATGACCTATGTTACTGAGGCACTTGAACTTGAAGATACAGTAAAGAATTATGAACGCCGCAGTTCTACTGGATGGAAATTTGTTTCAAGTTTCAGACCTACACGATCTGGAAGATTAGGACCTTTCATTGATACAATAGAATTCTTGTGGCGCTGTATGGTTAGAAAACAACTTGAGAAAGTTTTGGCTATCCTACTTGGTATCATTTCAGCTGCAATTCTTTTAGCTGAAGCAACTCTACTTCCTCGAGTTGATCTATCTCTTTTCTCAATCCTTATCAATAATGTAGGAAAGCAAGAGGTTCTTGTGCAGGTGTTTGCTTTTGTTCCTTTGATGTATATGTGCATCTGCACATATTATTCCTTGTTCAAAATTGGCATGTTGATGTTTTACTCATTAACACCCAGGCAAACAAGCTCGGTCAACTTGCTTATGATTTGCTCGATGGTCGCTCGTTATGCTCCTCCAGTTTCTTACAACTTTCTCAACCTCATTCGTCTTGGTGATCAAAAAACTATATTTGAAAAGCGAATGGGTAACATTGATCAAGCTGTCCCATTCTTTGGGAGTGAGTTTAACAGAATCTATCCACTTATCATGGTTATATACACCCTGCTGGTTGCTAGCAATTTCTTTGACCGCATAATTGATTTTTTCGGGAGCTGGAAGCGATTTAAATTTCAAACTGAAGTTGATGATATGGATGGTTTTGATCCATCTGGATTAATAATTTTGCAAAAAGAACGAACTTGGATGGAACAAGGTTGCAAAGTTGGGGAGCACGTCATTCCTTTAGCCAGGAATTTCAATGGCATTGATGTCGAGACTGGCAGCAACATCATGGAAATGAAAACAACAACTAATCTAATAACTGATGCTGGAAATGGAACTCCCTCAAAGTCTTTGAAAGAAGAATCGCGTAGATATAGCTCAAGCAAAGAATCCATCACGAACAAGTATGCTGCCATTAGAGAGCAAAGCAGACAAGGATCGTTCAATAAAAATCCGGTGGAGAAGAATGTTATTGCTTCCACCAAGGTCTCATTGCTTGATGCAGCTAACCCTGATAACACAACAGAAGGCCCACCTACTGGCTTGGGCTCAAAGTGGGCATCCATGAAAAATGGTTTTCAAAATTTCAAAGCCAATATAGCAGCCAAAAAATTTATTCCCCTGCGCCAAGTTCAAGAAACTGTAGATATGTCACGTGGCTCTTCTTCCGAGTCTCTTGATGATATATTTCAGAGATTGAAACGGCCCTCTGTAGACCATGTGACCTATGATGATGAGGATGAGGATGAAGATGGCATAGAAGTGCAGCAACATGCTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LMBR1

Protein Analysis

728

Amino Acids

82.67

Weight (kDa)

6.82

Isoelectric Point (pI)

40.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LMBR1 PF04791 3 - 495 7.2e-96 LMBR1-like membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1153
Acc36I ACCTGC 1 cut(s) 1153
AccB1I GGYRCC 1 cut(s) 253
AccB7I CCANNNNNTGG 3 cut(s) 737, 1415, 1943
AccI GTMKAC 1 cut(s) 2118
AccII CGCG 1 cut(s) 1771
AciI CCGC 5 cut(s) 61, 153, 535, 910, 1492
AclWI GGATC 4 cut(s) 650, 710, 1559, 1849
AcoI YGGCCR 1 cut(s) 739
AcsI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1987, 2015
AcuI CTGAAG 2 cut(s) 1101, 1560
AcvI CACGTG 1 cut(s) 2060
AcyI GRCGYC 2 cut(s) 363, 802
AdeI CACNNNGTG 1 cut(s) 737
AfaI GTAC 4 cut(s) 221, 229, 321, 839
AfiI CCNNNNNNNGG 6 cut(s) 37, 162, 265, 737, 1415, 1943
AflIII ACRYGT 2 cut(s) 93, 322
AgeI ACCGGT 1 cut(s) 834
AhlI ACTAGT 1 cut(s) 314
AjiI CACGTC 1 cut(s) 1636
AjnI CCWGG 4 cut(s) 116, 624, 1256, 1649
Alw21I GWGCWC 1 cut(s) 1635
Alw26I GTCTC 4 cut(s) 279, 1670, 1897, 2082
AlwI GGATC 4 cut(s) 650, 710, 1559, 1849
Ama87I CYCGRG 1 cut(s) 1098
AoxI GGCC 4 cut(s) 73, 739, 1933, 2108
ApeKI GCWGC 7 cut(s) 25, 1064, 1683, 1814, 1907, 2006, 2170
ApoI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1987, 2015
AseI ATTAAT 2 cut(s) 174, 1577
AsiGI ACCGGT 1 cut(s) 834
AspLEI GCGC 3 cut(s) 467, 1005, 2031
AspS9I GGNCC 6 cut(s) 46, 74, 82, 971, 1934, 2109
AsuC2I CCSGG 1 cut(s) 77
AsuHPI GGTGA 2 cut(s) 283, 1367
AsuNHI GCTAGC 1 cut(s) 1475
AvaI CYCGRG 1 cut(s) 1098
AvaII GGWCC 3 cut(s) 46, 82, 971
BaeGI GKGCMC 1 cut(s) 258
BaeI ACNNNNGTAYC 2 cut(s) 829, 862
BanI GGYRCC 1 cut(s) 253
BanII GRGCYC 1 cut(s) 1955
BarI GAAGNNNNNNTAC 2 cut(s) 1074, 1106
BbrPI CACGTG 1 cut(s) 2060
BbsI GAAGAC 3 cut(s) 317, 328, 407
Bbv12I GWGCWC 1 cut(s) 1635
BbvI GCAGC 7 cut(s) 12, 1051, 1695, 1801, 1919, 2018, 2182
BceAI ACGGC 1 cut(s) 2123
BcgI CGANNNNNNTGC 2 cut(s) 1654, 1688
BciT130I CCWGG 4 cut(s) 118, 626, 1258, 1651
BciVI GTATCC 1 cut(s) 104
BclI TGATCA 2 cut(s) 1357, 1396
BcnI CCSGG 1 cut(s) 77
BcoDI GTCTC 4 cut(s) 279, 1670, 1897, 2082
BcuI ACTAGT 1 cut(s) 314
BfaI CTAG 4 cut(s) 315, 419, 1476, 2181
BfmI CTRYAG 2 cut(s) 2046, 2115
BfoI RGCGCY 1 cut(s) 1006
BfuAI ACCTGC 1 cut(s) 1153
BfuI GTATCC 1 cut(s) 104
BglI GCCNNNNNGGC 1 cut(s) 747
BisI GCNGC 8 cut(s) 26, 910, 1065, 1684, 1815, 1908, 2007, 2171
BlpI GCTNAGC 1 cut(s) 699
BlsI GCNGC 8 cut(s) 27, 911, 1066, 1685, 1816, 1909, 2008, 2172
Bme1390I CCNGG 5 cut(s) 77, 118, 626, 1258, 1651
Bme18I GGWCC 3 cut(s) 46, 82, 971
BmeT110I CYCGRG 1 cut(s) 1098
BmgBI CACGTC 1 cut(s) 1636
BmgT120I GGNCC 6 cut(s) 46, 74, 82, 971, 1934, 2109
BmiI GGNNCC 3 cut(s) 84, 255, 817
BmrFI CCNGG 5 cut(s) 77, 118, 626, 1258, 1651
BmsI GCATC 7 cut(s) 268, 381, 577, 1206, 1717, 1894, 1973
BmtI GCTAGC 1 cut(s) 1479
BpiI GAAGAC 3 cut(s) 317, 328, 407
BpmI CTGGAG 3 cut(s) 244, 303, 1302
Bpu1102I GCTNAGC 1 cut(s) 699
BpuEI CTTGAG 2 cut(s) 1046, 1768
BpuMI CCSGG 1 cut(s) 77
BsaAI YACGTR 2 cut(s) 94, 2060
BsaBI GATNNNNATC 1 cut(s) 591
BsaHI GRCGYC 2 cut(s) 363, 802
BsaI GGTCTC 1 cut(s) 1897
BsaJI CCNNGG 6 cut(s) 36, 429, 624, 819, 1256, 1887
BsaWI WCCGGW 2 cut(s) 834, 1858
BsaXI ACNNNNNCTCC 4 cut(s) 363, 393, 397, 427
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 162, 265, 737, 1415, 1943
Bse118I RCCGGY 2 cut(s) 71, 834
Bse1I ACTGG 5 cut(s) 227, 925, 1319, 1684, 1948
Bse3DI GCAATG 1 cut(s) 1895
Bse8I GATNNNNATC 1 cut(s) 591
BseBI CCWGG 4 cut(s) 118, 626, 1258, 1651
BseDI CCNNGG 6 cut(s) 36, 429, 624, 819, 1256, 1887
BseGI GGATG 9 cut(s) 48, 632, 719, 929, 1561, 1611, 1964, 2149, 2155
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 6 cut(s) 37, 162, 265, 737, 1415, 1943
BseMI GCAATG 1 cut(s) 1895
BseMII CTCAG 3 cut(s) 653, 713, 858
BseNI ACTGG 5 cut(s) 227, 925, 1319, 1684, 1948
BseRI GAGGAG 2 cut(s) 371, 1305
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 7 cut(s) 12, 1051, 1695, 1801, 1919, 2018, 2182
BsgI GTGCAG 2 cut(s) 1181, 1186
Bsh1236I CGCG 1 cut(s) 1771
BshFI GGCC 4 cut(s) 75, 741, 1935, 2110
BshNI GGYRCC 1 cut(s) 253
BshTI ACCGGT 1 cut(s) 834
BsiHKAI GWGCWC 1 cut(s) 1635
BsiHKCI CYCGRG 1 cut(s) 1098
BsiSI CCGG 4 cut(s) 72, 77, 835, 1859
BslFI GGGAC 4 cut(s) 68, 134, 519, 1391
BslI CCNNNNNNNGG 6 cut(s) 37, 162, 265, 737, 1415, 1943
BsmAI GTCTC 4 cut(s) 279, 1670, 1897, 2082
BsmFI GGGAC 4 cut(s) 68, 134, 519, 1391
BsnI GGCC 4 cut(s) 75, 741, 1935, 2110
Bso31I GGTCTC 1 cut(s) 1897
BsoBI CYCGRG 1 cut(s) 1098
Bsp1286I GDGCHC 3 cut(s) 258, 1635, 1955
Bsp1407I TGTACA 1 cut(s) 319
Bsp143I GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
Bsp1720I GCTNAGC 1 cut(s) 699
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 5 cut(s) 61, 153, 535, 910, 1492
BspANI GGCC 4 cut(s) 75, 741, 1935, 2110
BspCNI CTCAG 3 cut(s) 652, 712, 859
BspFNI CGCG 1 cut(s) 1771
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 3 cut(s) 84, 255, 817
BspMI ACCTGC 1 cut(s) 1153
BspOI GCTAGC 1 cut(s) 1479
BspPI GGATC 4 cut(s) 650, 710, 1559, 1849
BspQI GCTCTTC 1 cut(s) 2071
BspT107I GGYRCC 1 cut(s) 253
BspTNI GGTCTC 1 cut(s) 1897
BsrDI GCAATG 1 cut(s) 1895
BsrFI RCCGGY 2 cut(s) 71, 834
BsrGI TGTACA 1 cut(s) 319
BsrI ACTGG 5 cut(s) 227, 925, 1319, 1684, 1948
BssAI RCCGGY 2 cut(s) 71, 834
BssECI CCNNGG 6 cut(s) 36, 429, 624, 819, 1256, 1887
BssMI GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
BssNI GRCGYC 2 cut(s) 363, 802
BssT1I CCWWGG 4 cut(s) 36, 429, 819, 1887
Bst2UI CCWGG 4 cut(s) 118, 626, 1258, 1651
Bst4CI ACNGT 4 cut(s) 106, 250, 892, 2047
Bst6I CTCTTC 2 cut(s) 819, 2071
BstACI GRCGYC 2 cut(s) 363, 802
BstAUI TGTACA 1 cut(s) 319
BstBAI YACGTR 2 cut(s) 94, 2060
BstC8I GCNNGC 3 cut(s) 73, 436, 1477
BstDEI CTNAG 4 cut(s) 331, 639, 699, 867
BstDSI CCRYGG 1 cut(s) 429
BstENI CCTNNNNNAGG 1 cut(s) 263
BstF5I GGATG 9 cut(s) 48, 632, 719, 929, 1561, 1611, 1964, 2149, 2155
BstFNI CGCG 1 cut(s) 1771
BstH2I RGCGCY 1 cut(s) 1006
BstHHI GCGC 3 cut(s) 467, 1005, 2031
BstKTI GATC 9 cut(s) 21, 658, 718, 959, 1108, 1360, 1399, 1567, 1844
BstMAI GTCTC 4 cut(s) 279, 1670, 1897, 2082
BstMBI GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
BstMWI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2003
BstNI CCWGG 4 cut(s) 118, 626, 1258, 1651
BstNSI RCATGY 3 cut(s) 326, 1234, 2180
BstSCI CCNGG 5 cut(s) 75, 116, 624, 1256, 1649
BstSFI CTRYAG 2 cut(s) 2046, 2115
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 1 cut(s) 1771
BstV1I GCAGC 7 cut(s) 12, 1051, 1695, 1801, 1919, 2018, 2182
BstV2I GAAGAC 3 cut(s) 317, 328, 407
BstX2I RGATCY 1 cut(s) 715
BstYI RGATCY 1 cut(s) 715
BsuI GTATCC 1 cut(s) 104
BsuRI GGCC 4 cut(s) 75, 741, 1935, 2110
BtgI CCRYGG 1 cut(s) 429
BtrI CACGTC 1 cut(s) 1636
BtsCI GGATG 9 cut(s) 48, 632, 719, 929, 1561, 1611, 1964, 2149, 2155
BveI ACCTGC 1 cut(s) 1153
Cac8I GCNNGC 3 cut(s) 73, 436, 1477
CciI TCATGA 1 cut(s) 387
CfoI GCGC 3 cut(s) 467, 1005, 2031
Cfr10I RCCGGY 2 cut(s) 71, 834
Cfr13I GGNCC 6 cut(s) 46, 74, 82, 971, 1934, 2109
CseI GACGC 2 cut(s) 352, 791
CsiI ACCWGGT 1 cut(s) 116
Csp6I GTAC 4 cut(s) 220, 228, 320, 838
CspAI ACCGGT 1 cut(s) 834
CviQI GTAC 4 cut(s) 220, 228, 320, 838
DdeI CTNAG 4 cut(s) 331, 639, 699, 867
DpnI GATC 9 cut(s) 20, 657, 717, 958, 1107, 1359, 1398, 1566, 1843
DpnII GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
DraI TTTAAA 3 cut(s) 709, 727, 1528
DraIII CACNNNGTG 1 cut(s) 737
EaeI YGGCCR 1 cut(s) 739
Eam1104I CTCTTC 2 cut(s) 819, 2071
EarI CTCTTC 2 cut(s) 819, 2071
Eco130I CCWWGG 4 cut(s) 36, 429, 819, 1887
Eco24I GRGCYC 1 cut(s) 1955
Eco31I GGTCTC 1 cut(s) 1897
Eco47I GGWCC 3 cut(s) 46, 82, 971
Eco57I CTGAAG 2 cut(s) 1101, 1560
Eco72I CACGTG 1 cut(s) 2060
Eco88I CYCGRG 1 cut(s) 1098
EcoNI CCTNNNNNAGG 1 cut(s) 263
EcoO109I RGGNCCY 2 cut(s) 82, 971
EcoRI GAATTC 1 cut(s) 992
EcoRII CCWGG 4 cut(s) 116, 624, 1256, 1649
EcoT14I CCWWGG 4 cut(s) 36, 429, 819, 1887
EcoT38I GRGCYC 1 cut(s) 1955
ErhI CCWWGG 4 cut(s) 36, 429, 819, 1887
FalI AAGNNNNNCTT 2 cut(s) 1140, 1172
FaqI GGGAC 4 cut(s) 68, 134, 519, 1391
FauI CCCGC 2 cut(s) 160, 542
FbaI TGATCA 2 cut(s) 1357, 1396
FblI GTMKAC 1 cut(s) 2118
Fnu4HI GCNGC 8 cut(s) 26, 910, 1065, 1684, 1815, 1908, 2007, 2171
FokI GGATG 9 cut(s) 55, 619, 706, 936, 1568, 1618, 1951, 2156, 2162
FriOI GRGCYC 1 cut(s) 1955
Fsp4HI GCNGC 8 cut(s) 26, 910, 1065, 1684, 1815, 1908, 2007, 2171
FspBI CTAG 4 cut(s) 315, 419, 1476, 2181
GlaI GCGC 3 cut(s) 466, 1004, 2030
GluI GCNGC 8 cut(s) 26, 910, 1065, 1684, 1815, 1908, 2007, 2171
GsuI CTGGAG 3 cut(s) 244, 303, 1302
HaeII RGCGCY 1 cut(s) 1006
HaeIII GGCC 4 cut(s) 75, 741, 1935, 2110
HapII CCGG 4 cut(s) 72, 77, 835, 1859
HgaI GACGC 2 cut(s) 352, 791
HhaI GCGC 3 cut(s) 467, 1005, 2031
Hin1I GRCGYC 2 cut(s) 363, 802
Hin6I GCGC 3 cut(s) 465, 1003, 2029
HinP1I GCGC 3 cut(s) 465, 1003, 2029
HincII GTYRAC 2 cut(s) 328, 1276
HindII GTYRAC 2 cut(s) 328, 1276
HinfI GANTC 4 cut(s) 1434, 1766, 1793, 2075
HpaI GTTAAC 1 cut(s) 328
HpaII CCGG 4 cut(s) 72, 77, 835, 1859
HphI GGTGA 2 cut(s) 283, 1367
Hpy166II GTNNAC 4 cut(s) 320, 328, 1276, 2119
Hpy188I TCNGA 6 cut(s) 110, 353, 642, 947, 2074, 2097
Hpy8I GTNNAC 4 cut(s) 320, 328, 1276, 2119
Hpy99I CGWCG 2 cut(s) 110, 172
HpyAV CCTTC 1 cut(s) 1925
HpyCH4III ACNGT 4 cut(s) 106, 250, 892, 2047
HpyCH4IV ACGT 3 cut(s) 93, 1635, 2059
HpyF10VI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2003
HpyF3I CTNAG 4 cut(s) 331, 639, 699, 867
HpySE526I ACGT 3 cut(s) 93, 1635, 2059
Hsp92I GRCGYC 2 cut(s) 363, 802
HspAI GCGC 3 cut(s) 465, 1003, 2029
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Ksp22I TGATCA 2 cut(s) 1357, 1396
KspAI GTTAAC 1 cut(s) 328
Kzo9I GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
LguI GCTCTTC 1 cut(s) 2071
LmnI GCTCC 6 cut(s) 63, 353, 443, 1318, 1512, 1630
Lsp1109I GCAGC 7 cut(s) 12, 1051, 1695, 1801, 1919, 2018, 2182
LweI GCATC 7 cut(s) 268, 381, 577, 1206, 1717, 1894, 1973
MabI ACCWGGT 1 cut(s) 116
MaeI CTAG 4 cut(s) 315, 419, 1476, 2181
MaeII ACGT 3 cut(s) 93, 1635, 2059
MaeIII GTNAC 5 cut(s) 457, 862, 1388, 2055, 2125
MalI GATC 9 cut(s) 20, 657, 717, 958, 1107, 1359, 1398, 1566, 1843
MboI GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
MflI RGATCY 1 cut(s) 715
MhlI GDGCHC 3 cut(s) 258, 1635, 1955
MlyI GAGTC 1 cut(s) 2084
MmeI TCCRAC 1 cut(s) 88
MroNI GCCGGC 1 cut(s) 71
MseI TTAA 9 cut(s) 174, 327, 662, 708, 726, 1250, 1428, 1527, 1577
MslI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1697, 2165
MspA1I CMGCKG 2 cut(s) 703, 1064
MspI CCGG 4 cut(s) 72, 77, 835, 1859
MspR9I CCNGG 5 cut(s) 77, 118, 626, 1258, 1651
MvaI CCWGG 4 cut(s) 118, 626, 1258, 1651
MvnI CGCG 1 cut(s) 1771
MwoI GCNNNNNNNGC 4 cut(s) 569, 747, 1310, 2003
NaeI GCCGGC 1 cut(s) 73
NciI CCSGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 429
NdeII GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
NgoMIV GCCGGC 1 cut(s) 71
NheI GCTAGC 1 cut(s) 1475
NlaIV GGNNCC 3 cut(s) 84, 255, 817
NmuCI GTSAC 2 cut(s) 2055, 2125
NspI RCATGY 3 cut(s) 326, 1234, 2180
PaeR7I CTCGAG 1 cut(s) 1098
PagI TCATGA 1 cut(s) 387
PaqCI CACCTGC 1 cut(s) 1153
PciI ACATGT 1 cut(s) 322
PciSI GCTCTTC 1 cut(s) 2071
PdiI GCCGGC 1 cut(s) 73
PfeI GAWTC 3 cut(s) 1434, 1766, 1793
PflMI CCANNNNNTGG 3 cut(s) 737, 1415, 1943
PinAI ACCGGT 1 cut(s) 834
PkrI GCNGC 8 cut(s) 27, 911, 1066, 1685, 1816, 1909, 2008, 2172
PleI GAGTC 1 cut(s) 2083
PmaCI CACGTG 1 cut(s) 2060
PmlI CACGTG 1 cut(s) 2060
PpsI GAGTC 1 cut(s) 2083
Ppu21I YACGTR 2 cut(s) 94, 2060
PpuMI RGGWCCY 2 cut(s) 82, 971
PscI ACATGT 1 cut(s) 322
PshBI ATTAAT 2 cut(s) 174, 1577
Psp5II RGGWCCY 2 cut(s) 82, 971
Psp6I CCWGG 4 cut(s) 116, 624, 1256, 1649
PspCI CACGTG 1 cut(s) 2060
PspGI CCWGG 4 cut(s) 116, 624, 1256, 1649
PspN4I GGNNCC 3 cut(s) 84, 255, 817
PspPI GGNCC 6 cut(s) 46, 74, 82, 971, 1934, 2109
PspPPI RGGWCCY 2 cut(s) 82, 971
PspXI VCTCGAGB 1 cut(s) 1098
PsuI RGATCY 1 cut(s) 715
PvuII CAGCTG 2 cut(s) 703, 1064
RsaI GTAC 4 cut(s) 221, 229, 321, 839
RsaNI GTAC 4 cut(s) 220, 228, 320, 838
RseI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1697, 2165
SapI GCTCTTC 1 cut(s) 2071
SaqAI TTAA 9 cut(s) 174, 327, 662, 708, 726, 1250, 1428, 1527, 1577
SatI GCNGC 8 cut(s) 26, 910, 1065, 1684, 1815, 1908, 2007, 2171
Sau3AI GATC 9 cut(s) 18, 655, 715, 956, 1105, 1357, 1396, 1564, 1841
Sau96I GGNCC 6 cut(s) 46, 74, 82, 971, 1934, 2109
SchI GAGTC 1 cut(s) 2084
ScrFI CCNGG 5 cut(s) 77, 118, 626, 1258, 1651
SduI GDGCHC 3 cut(s) 258, 1635, 1955
SexAI ACCWGGT 1 cut(s) 116
SfaNI GCATC 7 cut(s) 268, 381, 577, 1206, 1717, 1894, 1973
SfcI CTRYAG 2 cut(s) 2046, 2115
Sfr274I CTCGAG 1 cut(s) 1098
SinI GGWCC 3 cut(s) 46, 82, 971
SlaI CTCGAG 1 cut(s) 1098
SmiI ATTTAAAT 1 cut(s) 1528
SmiMI CAYNNNNRTG 6 cut(s) 389, 405, 641, 1235, 1697, 2165
SmlI CTYRAG 3 cut(s) 1025, 1098, 1783
SmoI CTYRAG 3 cut(s) 1025, 1098, 1783
SpeI ACTAGT 1 cut(s) 314
SsiI CCGC 5 cut(s) 61, 153, 535, 910, 1492
SspMI CTAG 4 cut(s) 315, 419, 1476, 2181
StyD4I CCNGG 5 cut(s) 75, 116, 624, 1256, 1649
StyI CCWWGG 4 cut(s) 36, 429, 819, 1887
SwaI ATTTAAAT 1 cut(s) 1528
TaaI ACNGT 4 cut(s) 106, 250, 892, 2047
TaiI ACGT 3 cut(s) 96, 1638, 2062
TaqI TCGA 5 cut(s) 183, 811, 1099, 1295, 1674
TaqII GACCGA 1 cut(s) 1261
TatI WGTACW 2 cut(s) 227, 319
TauI GCSGC 1 cut(s) 912
TfiI GAWTC 3 cut(s) 1434, 1766, 1793
Tru1I TTAA 9 cut(s) 174, 327, 662, 708, 726, 1250, 1428, 1527, 1577
Tru9I TTAA 9 cut(s) 174, 327, 662, 708, 726, 1250, 1428, 1527, 1577
TseFI GTSAC 2 cut(s) 2055, 2125
TseI GCWGC 7 cut(s) 25, 1064, 1683, 1814, 1907, 2006, 2170
Tsp45I GTSAC 2 cut(s) 2055, 2125
TspDTI ATGAA 6 cut(s) 792, 918, 967, 1715, 1985, 2166
Van91I CCANNNNNTGG 3 cut(s) 737, 1415, 1943
VpaK11BI GGWCC 3 cut(s) 46, 82, 971
VspI ATTAAT 2 cut(s) 174, 1577
XagI CCTNNNNNAGG 1 cut(s) 263
XapI RAATTY 8 cut(s) 195, 495, 929, 992, 1529, 1654, 1987, 2015
XceI RCATGY 3 cut(s) 326, 1234, 2180
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XhoI CTCGAG 1 cut(s) 1098
XmiI GTMKAC 1 cut(s) 2118
XspI CTAG 4 cut(s) 315, 419, 1476, 2181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.