Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008090

Physical Location & Seq

Genomic Coordinates Reverse (-)

23849303 .. 23857971

Gene Structure 8669 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g28130.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGCTTACCGTTGGGTACACTTGGTTCTGTTCTCTCTCCATCATCGTCATTGTGCCGGCCGACATATGGACGACGATAAACCATATTGAGAGTGGAGGAATCTCTTTCTTTTGGAGCTGGTCATATTGGAGTACATTTTTACTAACTTGGACTGTGGTGCCCCTTATTCAGGGTTTTGAAGATGCTGGGGACTTCACTGTGACAGAGAGATTGAAGACTAGTGTACATGTTAACTTGGTTTTCTATCTAATTCTGGGGTTTATTGGTCTTATTGGATTAATTCTTCTCATCAGTATGCACAAAAACTGGGGTGGAGGTGTTCTTGGTTTTGCCATGGGCTGCTCGAATACTTTTGGACTTGTTACAGGTGCATTTCTTCTTGGATTTGGGTTGAGTGAAATCCCAAAGGGCCTTTGGAAAAACTCTGATTGGACTATTCGGCAAAAAGTTCTTTCTCATAAAATTGCCAAAATGGCTGTGAAACTTGATGACGCCCATCAAGATCTTTCAAATGCTATTGTGGTCGCCCAAGCAACATCCACTCAGATGTCCAAGCGTGATCCTTTGAGACCCTACATGGATATAATAGACAATATGTTAGCTCAAATGTTCAGGGAGGACCCATCCTTCAAACCACAAGGTGGCCGATTAGGTGAAAATGACATGGACTATGATACTGATGAAAAATCAATGGCAACGCTTAGGCGTCATCTTCGAGGAGCCCGGGAAGAGTATTACCGGTACAAAAGTGAGTATATGACCTATGTTATGGAGGCCCTTGAACTTGAAGATACTATAAAAAATTATGAACGTCGGAGTTCTACTGGATGGAAATATGTCTCAAGCTTCAGACCTACTCGAAATGGCAGATTAGGATCTCTTGTTGATACAATAGAATTCTTTTGGCGCTGCATACTAAGAAAAGAAGTTGAGAAACTTCTGGCTATCATACTTGGTATTATTTCAATTGCTATTCTTTTAGCAGAGGCAACTCTTCTTCCTCGAGTTGATCTATCTCTCTTTTCAATTCTCATCAATTCTGTTGGAAAGCAAGAGGTTCTTGTACAGGTATTTGCCTTTGTTCCTTTGATGTATATGTGCATCTGCACATATTACTCCTTGTTCAAAATTGGTATGTTGATGTTTTACTCATTAACACCCAAGCAAACAAGCTCAGTCAACTTGCTTATGATATGCTCGATGGTCGCTCGTTATGCTCCTCCAGTTTCATACAATTTCCTTAATCTCATTCGTCTTGGTGAACACAAGACTATATTTGAAAAGCGAATGGGAAACATTGATCGAGCTGTCCCTTTCTTTGGGAGTGAGTTTAACAGAATATATCCACTTATCATGGTTGTGTACACCCTATTGGTCGCCTGCAATTTTTTTGACCGCATAATTAATTTTTTTGGGAGCTGGAAGCGATTTAGATTTCAAACTGAAACTGATGATATGGATGGTTTTGATCCATCTGGATTAATTATCTTACAAAAGGAACGATCTTGGATTGAACAAGGTCTGAAAGTTGGTGAACATGTGATCCCCTTGGCTAGGAATTTCAACAGCACGGATGTTGAGACTGGTAGCAACAACATGGATAGGAGTCATGTTGAACTGAAAGCAACAACCAGTCTGGGCACTGAGGGTGCAAATGGAACTCCGTCAAAATCTTTGAAAGAAGAATCTCGTAGTAGATATGGCTCAAGCAAAGAAGCCATCAGCAACAAGTATGCTGCCATTAGAGGTCAGAGATCATCTTCGAATGCAAATCCGGTGGAGAAGAATATTTCTGCTGCCAAAGTCTCCTTGCTTGAAGAAGGCAACTCTAACCCTGATAGCACGGCGGGAGGGTTACCTACTGGTTTGTCCTCAAAGTGGGAATCAATGAAAAATGGTTTTCAAAATTTCAAGGCAAACATAGCAGCCAAAAAATTCATTCCCTTGCGCCAAGTTCAAGATACTGAAGACCTATCTCGTGCATCTTCTAACGAGTCCCTCGACGAGATATTCCAGAGATTGAAGCGGCCATCTGTAGACCATGTGAGTTATGTTGACGAGGATGAAGATGGCATGGAGGGGAAGTCTGGTCCCAGCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LMBR1

Protein Analysis

701

Amino Acids

79.06

Weight (kDa)

7.58

Isoelectric Point (pI)

41.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008090)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65290 AT5G65290
fragaria_vesca	FvH4_1g20250 FvH4_1g20250 FvH4_1g20250 FvH4_1g20250 FvH4_1g20250 FvH4_1g20250
malus_domestica	MD01G1035600.v1.1 MD15G1320200.v1.1
prunus_persica	Prupe.6G193100_v2.0.a1 Prupe.6G193100_v2.0.a1 Prupe.6G193100_v2.0.a1
pyrus_communis	pycom15g28130
rosa_chinensis	RchiOBHm_Chr2g0112391
rosa_laevigata	RLG00000017973
rosa_multiflora	Rmu_sc0004467.1_g000055
rosa_roxburghii	Rroxscaffold_2G00131480
rosa_rugosa	Rorug02G0180100
rosa_samantha	Rh2AG233100 Rh2BG246600 Rh2CG237500 Rh2DG240700
rosa_wichuraiana	Rw2G018070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	157
AccB7I	CCANNNNNTGG	1 cut(s)	641
AccI	GTMKAC	1 cut(s)	2037
AciI	CCGC	3 cut(s)	1396, 1847, 2026
AclWI	GGATC	4 cut(s)	554, 883, 1463, 1537
AcoI	YGGCCR	3 cut(s)	57, 643, 2027
AcsI	RAATTY	4 cut(s)	896, 1558, 1906, 1934
AcuI	CTGAAG	2 cut(s)	832, 1986
AcyI	GRCGYC	2 cut(s)	492, 706
AdeI	CACNNNGTG	1 cut(s)	641
AfaI	GTAC	6 cut(s)	17, 133, 225, 743, 1065, 1364
AfiI	CCNNNNNNNGG	6 cut(s)	66, 169, 641, 1319, 1554, 1878
AflIII	ACRYGT	2 cut(s)	226, 1537
AgeI	ACCGGT	1 cut(s)	738
AhlI	ACTAGT	1 cut(s)	218
AloI	GAACNNNNNNTCC	2 cut(s)	1527, 1559
AluBI	AGCT	6 cut(s)	117, 602, 846, 1173, 1307, 1419
AluI	AGCT	6 cut(s)	117, 602, 846, 1173, 1307, 1419
Alw26I	GTCTC	4 cut(s)	562, 844, 1574, 1810
AlwI	GGATC	4 cut(s)	554, 883, 1463, 1537
Ama87I	CYCGRG	2 cut(s)	723, 1002
AoxI	GGCC	5 cut(s)	57, 409, 643, 774, 2027
ApeKI	GCWGC	5 cut(s)	339, 909, 1736, 1796, 1925
ApoI	RAATTY	4 cut(s)	896, 1558, 1906, 1934
AseI	ATTAAT	3 cut(s)	278, 1404, 1481
AsiGI	ACCGGT	1 cut(s)	738
AspLEI	GCGC	2 cut(s)	909, 1950
AspS9I	GGNCC	4 cut(s)	409, 619, 775, 2090
AsuC2I	CCSGG	2 cut(s)	724, 725
AsuHPI	GGTGA	3 cut(s)	665, 1271, 1544
AsuII	TTCGAA	1 cut(s)	1763
AvaI	CYCGRG	2 cut(s)	723, 1002
AvaII	GGWCC	2 cut(s)	619, 2090
BaeGI	GKGCMC	2 cut(s)	162, 1643
BaeI	ACNNNNGTAYC	2 cut(s)	733, 766
BanI	GGYRCC	1 cut(s)	157
BanII	GRGCYC	1 cut(s)	724
BauI	CACGAG	1 cut(s)	1977
BbsI	GAAGAC	2 cut(s)	221, 1974
BbvI	GCAGC	5 cut(s)	326, 896, 1723, 1783, 1937
BceAI	ACGGC	1 cut(s)	1860
BcnI	CCSGG	2 cut(s)	724, 725
BcoDI	GTCTC	4 cut(s)	562, 844, 1574, 1810
BcuI	ACTAGT	1 cut(s)	218
BfaI	CTAG	2 cut(s)	219, 1554
BfmI	CTRYAG	1 cut(s)	2034
BfoI	RGCGCY	1 cut(s)	910
BglI	GCCNNNNNGGC	1 cut(s)	473
BglII	AGATCT	1 cut(s)	502
BisI	GCNGC	6 cut(s)	340, 910, 1737, 1797, 1926, 2027
BlsI	GCNGC	6 cut(s)	341, 911, 1738, 1798, 1927, 2028
Bme1390I	CCNGG	2 cut(s)	724, 725
Bme18I	GGWCC	2 cut(s)	619, 2090
BmeT110I	CYCGRG	2 cut(s)	723, 1002
BmgT120I	GGNCC	4 cut(s)	409, 619, 775, 2090
BmiI	GGNNCC	4 cut(s)	159, 621, 721, 2092
BmrFI	CCNGG	2 cut(s)	724, 725
BmrI	ACTGGG	1 cut(s)	316
BmsI	GCATC	3 cut(s)	172, 1110, 1991
BmuI	ACTGGG	1 cut(s)	316
BpiI	GAAGAC	2 cut(s)	221, 1974
BpmI	CTGGAG	1 cut(s)	1206
Bpu10I	CCTNAGC	1 cut(s)	701
Bpu14I	TTCGAA	1 cut(s)	1763
BpuEI	CTTGAG	2 cut(s)	826, 1690
BpuMI	CCSGG	2 cut(s)	724, 725
BsaBI	GATNNNNATC	1 cut(s)	874
BsaHI	GRCGYC	2 cut(s)	492, 706
BsaI	GGTCTC	1 cut(s)	562
BsaJI	CCNNGG	3 cut(s)	333, 723, 1548
BsaWI	WCCGGW	2 cut(s)	738, 1774
BsaXI	ACNNNNNCTCC	2 cut(s)	2069, 2099
Bsc4I	CCNNNNNNNGG	6 cut(s)	66, 169, 641, 1319, 1554, 1878
Bse118I	RCCGGY	2 cut(s)	55, 738
Bse1I	ACTGG	6 cut(s)	311, 829, 1223, 1588, 1632, 1867
Bse8I	GATNNNNATC	1 cut(s)	874
BseDI	CCNNGG	3 cut(s)	333, 723, 1548
BseGI	GGATG	6 cut(s)	536, 623, 833, 1465, 1579, 2068
BseJI	GATNNNNATC	1 cut(s)	874
BseLI	CCNNNNNNNGG	6 cut(s)	66, 169, 641, 1319, 1554, 1878
BseMII	CTCAG	3 cut(s)	557, 1188, 1635
BseNI	ACTGG	6 cut(s)	311, 829, 1223, 1588, 1632, 1867
BseRI	GAGGAG	2 cut(s)	732, 1209
BseSI	GKGCMC	2 cut(s)	162, 1643
BseX3I	CGGCCG	1 cut(s)	57
BseXI	GCAGC	5 cut(s)	326, 896, 1723, 1783, 1937
BseYI	CCCAGC	2 cut(s)	185, 2093
BsgI	GTGCAG	1 cut(s)	1090
Bsh1285I	CGRYCG	1 cut(s)	60
BshFI	GGCC	5 cut(s)	59, 411, 645, 776, 2029
BshNI	GGYRCC	1 cut(s)	157
BshTI	ACCGGT	1 cut(s)	738
BsiEI	CGRYCG	1 cut(s)	60
BsiHKCI	CYCGRG	2 cut(s)	723, 1002
BsiSI	CCGG	4 cut(s)	56, 724, 739, 1775
BslFI	GGGAC	4 cut(s)	203, 1295, 1981, 2076
BslI	CCNNNNNNNGG	6 cut(s)	66, 169, 641, 1319, 1554, 1878
BsmAI	GTCTC	4 cut(s)	562, 844, 1574, 1810
BsmFI	GGGAC	4 cut(s)	203, 1295, 1981, 2076
BsmI	GAATGC	1 cut(s)	1771
BsnI	GGCC	5 cut(s)	59, 411, 645, 776, 2029
Bso31I	GGTCTC	1 cut(s)	562
BsoBI	CYCGRG	2 cut(s)	723, 1002
Bsp119I	TTCGAA	1 cut(s)	1763
Bsp1286I	GDGCHC	3 cut(s)	162, 724, 1643
Bsp1407I	TGTACA	3 cut(s)	223, 1063, 1362
Bsp143I	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
Bsp19I	CCATGG	1 cut(s)	333
BspACI	CCGC	3 cut(s)	1396, 1847, 2026
BspANI	GGCC	5 cut(s)	59, 411, 645, 776, 2029
BspCNI	CTCAG	3 cut(s)	556, 1187, 1636
BspLI	GGNNCC	4 cut(s)	159, 621, 721, 2092
BspPI	GGATC	4 cut(s)	554, 883, 1463, 1537
BspT104I	TTCGAA	1 cut(s)	1763
BspT107I	GGYRCC	1 cut(s)	157
BspTNI	GGTCTC	1 cut(s)	562
BsrFI	RCCGGY	2 cut(s)	55, 738
BsrGI	TGTACA	3 cut(s)	223, 1063, 1362
BsrI	ACTGG	6 cut(s)	311, 829, 1223, 1588, 1632, 1867
BssAI	RCCGGY	2 cut(s)	55, 738
BssECI	CCNNGG	3 cut(s)	333, 723, 1548
BssMI	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
BssNI	GRCGYC	2 cut(s)	492, 706
BssSI	CACGAG	1 cut(s)	1977
BssT1I	CCWWGG	2 cut(s)	333, 1548
Bst2BI	CACGAG	1 cut(s)	1977
Bst4CI	ACNGT	3 cut(s)	10, 154, 199
Bst6I	CTCTTC	2 cut(s)	723, 999
BstACI	GRCGYC	2 cut(s)	492, 706
BstAUI	TGTACA	3 cut(s)	223, 1063, 1362
BstBI	TTCGAA	1 cut(s)	1763
BstC8I	GCNNGC	2 cut(s)	57, 1381
BstDEI	CTNAG	5 cut(s)	543, 701, 917, 1174, 1644
BstDSI	CCRYGG	1 cut(s)	333
BstEII	GGTNACC	1 cut(s)	1854
BstENI	CCTNNNNNAGG	2 cut(s)	167, 1552
BstF5I	GGATG	6 cut(s)	536, 623, 833, 1465, 1579, 2068
BstH2I	RGCGCY	1 cut(s)	910
BstHHI	GCGC	2 cut(s)	909, 1950
BstKTI	GATC	9 cut(s)	505, 562, 878, 1012, 1303, 1471, 1505, 1545, 1757
BstMAI	GTCTC	4 cut(s)	562, 844, 1574, 1810
BstMBI	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
BstMCI	CGRYCG	1 cut(s)	60
BstMWI	GCNNNNNNNGC	3 cut(s)	473, 1214, 1922
BstNSI	RCATGY	2 cut(s)	230, 1541
BstPI	GGTNACC	1 cut(s)	1854
BstSCI	CCNGG	2 cut(s)	722, 723
BstSFI	CTRYAG	1 cut(s)	2034
BstSLI	GKGCMC	2 cut(s)	162, 1643
BstV1I	GCAGC	5 cut(s)	326, 896, 1723, 1783, 1937
BstV2I	GAAGAC	2 cut(s)	221, 1974
BstX2I	RGATCY	2 cut(s)	502, 875
BstYI	RGATCY	2 cut(s)	502, 875
BstZI	CGGCCG	1 cut(s)	57
BsuRI	GGCC	5 cut(s)	59, 411, 645, 776, 2029
BtgI	CCRYGG	1 cut(s)	333
BtsCI	GGATG	6 cut(s)	536, 623, 833, 1465, 1579, 2068
BtsIMutI	CAGTG	2 cut(s)	195, 1641
Cac8I	GCNNGC	2 cut(s)	57, 1381
CfoI	GCGC	2 cut(s)	909, 1950
Cfr10I	RCCGGY	2 cut(s)	55, 738
Cfr13I	GGNCC	4 cut(s)	409, 619, 775, 2090
Cfr9I	CCCGGG	1 cut(s)	723
CseI	GACGC	2 cut(s)	500, 695
Csp6I	GTAC	6 cut(s)	16, 132, 224, 742, 1064, 1363
CspAI	ACCGGT	1 cut(s)	738
CspCI	CAANNNNNGTGG	2 cut(s)	1758, 1793
CviQI	GTAC	6 cut(s)	16, 132, 224, 742, 1064, 1363
DdeI	CTNAG	5 cut(s)	543, 701, 917, 1174, 1644
DpnI	GATC	9 cut(s)	504, 561, 877, 1011, 1302, 1470, 1504, 1544, 1756
DpnII	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
DraIII	CACNNNGTG	1 cut(s)	641
EaeI	YGGCCR	3 cut(s)	57, 643, 2027
EagI	CGGCCG	1 cut(s)	57
Eam1104I	CTCTTC	2 cut(s)	723, 999
EarI	CTCTTC	2 cut(s)	723, 999
EclXI	CGGCCG	1 cut(s)	57
Eco130I	CCWWGG	2 cut(s)	333, 1548
Eco24I	GRGCYC	1 cut(s)	724
Eco31I	GGTCTC	1 cut(s)	562
Eco47I	GGWCC	2 cut(s)	619, 2090
Eco52I	CGGCCG	1 cut(s)	57
Eco57I	CTGAAG	2 cut(s)	832, 1986
Eco88I	CYCGRG	2 cut(s)	723, 1002
Eco91I	GGTNACC	1 cut(s)	1854
EcoNI	CCTNNNNNAGG	2 cut(s)	167, 1552
EcoO109I	RGGNCCY	3 cut(s)	409, 619, 775
EcoO65I	GGTNACC	1 cut(s)	1854
EcoRI	GAATTC	1 cut(s)	896
EcoT14I	CCWWGG	2 cut(s)	333, 1548
EcoT38I	GRGCYC	1 cut(s)	724
ErhI	CCWWGG	2 cut(s)	333, 1548
FalI	AAGNNNNNCTT	2 cut(s)	1044, 1076
FaqI	GGGAC	4 cut(s)	203, 1295, 1981, 2076
FauI	CCCGC	1 cut(s)	1840
FauNDI	CATATG	1 cut(s)	65
FblI	GTMKAC	1 cut(s)	2037
Fnu4HI	GCNGC	6 cut(s)	340, 910, 1737, 1797, 1926, 2027
FokI	GGATG	6 cut(s)	523, 610, 840, 1472, 1586, 2075
FriOI	GRGCYC	1 cut(s)	724
Fsp4HI	GCNGC	6 cut(s)	340, 910, 1737, 1797, 1926, 2027
FspBI	CTAG	2 cut(s)	219, 1554
GlaI	GCGC	2 cut(s)	908, 1949
GluI	GCNGC	6 cut(s)	340, 910, 1737, 1797, 1926, 2027
GsaI	CCCAGC	2 cut(s)	189, 2097
GsuI	CTGGAG	1 cut(s)	1206
HaeII	RGCGCY	1 cut(s)	910
HaeIII	GGCC	5 cut(s)	59, 411, 645, 776, 2029
HapII	CCGG	4 cut(s)	56, 724, 739, 1775
HgaI	GACGC	2 cut(s)	500, 695
HhaI	GCGC	2 cut(s)	909, 1950
Hin1I	GRCGYC	2 cut(s)	492, 706
Hin6I	GCGC	2 cut(s)	907, 1948
HinP1I	GCGC	2 cut(s)	907, 1948
HincII	GTYRAC	3 cut(s)	232, 1180, 2056
HindII	GTYRAC	3 cut(s)	232, 1180, 2056
HindIII	AAGCTT	1 cut(s)	844
HinfI	GANTC	5 cut(s)	99, 1606, 1685, 1883, 1994
HpaI	GTTAAC	1 cut(s)	232
HpaII	CCGG	4 cut(s)	56, 724, 739, 1775
HphI	GGTGA	3 cut(s)	665, 1271, 1544
Hpy188I	TCNGA	6 cut(s)	427, 546, 816, 851, 1524, 1752
Hpy188III	TCNNGA	4 cut(s)	500, 1476, 1958, 2014
Hpy99I	CGWCG	3 cut(s)	76, 816, 2006
HpyAV	CCTTC	2 cut(s)	637, 1814
HpyCH4III	ACNGT	3 cut(s)	10, 154, 199
HpyCH4IV	ACGT	1 cut(s)	811
HpyCH4V	TGCA	9 cut(s)	298, 371, 912, 1101, 1107, 1383, 1652, 1769, 1982
HpyF10VI	GCNNNNNNNGC	3 cut(s)	473, 1214, 1922
HpyF3I	CTNAG	5 cut(s)	543, 701, 917, 1174, 1644
HpySE526I	ACGT	1 cut(s)	811
Hsp92I	GRCGYC	2 cut(s)	492, 706
HspAI	GCGC	2 cut(s)	907, 1948
KroI	GCCGGC	1 cut(s)	55
KroNI	GCCGGC	1 cut(s)	57
KspAI	GTTAAC	1 cut(s)	232
Kzo9I	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
LmnI	GCTCC	4 cut(s)	114, 719, 1222, 1416
Lsp1109I	GCAGC	5 cut(s)	326, 896, 1723, 1783, 1937
LweI	GCATC	3 cut(s)	172, 1110, 1991
MaeI	CTAG	2 cut(s)	219, 1554
MaeII	ACGT	1 cut(s)	811
MaeIII	GTNAC	3 cut(s)	199, 361, 1854
MalI	GATC	9 cut(s)	504, 561, 877, 1011, 1302, 1470, 1504, 1544, 1756
MboI	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	2 cut(s)	502, 875
MhlI	GDGCHC	3 cut(s)	162, 724, 1643
MlyI	GAGTC	2 cut(s)	1615, 2003
MmeI	TCCRAC	2 cut(s)	794, 1024
MroNI	GCCGGC	1 cut(s)	55
MseI	TTAA	7 cut(s)	231, 278, 1154, 1242, 1332, 1404, 1481
MslI	CAYNNNNRTG	3 cut(s)	293, 545, 1358
MspI	CCGG	4 cut(s)	56, 724, 739, 1775
MspR9I	CCNGG	2 cut(s)	724, 725
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	1 cut(s)	1771
MwoI	GCNNNNNNNGC	3 cut(s)	473, 1214, 1922
NaeI	GCCGGC	1 cut(s)	57
NciI	CCSGG	2 cut(s)	724, 725
NcoI	CCATGG	1 cut(s)	333
NdeI	CATATG	1 cut(s)	65
NdeII	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
NgoMIV	GCCGGC	1 cut(s)	55
NlaIV	GGNNCC	4 cut(s)	159, 621, 721, 2092
NmuCI	GTSAC	1 cut(s)	199
NspI	RCATGY	2 cut(s)	230, 1541
NspV	TTCGAA	1 cut(s)	1763
PaeR7I	CTCGAG	1 cut(s)	1002
PciI	ACATGT	2 cut(s)	226, 1537
PcsI	WCGNNNNNNNCGW	1 cut(s)	1998
PctI	GAATGC	1 cut(s)	1771
PdiI	GCCGGC	1 cut(s)	57
PfeI	GAWTC	3 cut(s)	99, 1685, 1883
PflMI	CCANNNNNTGG	1 cut(s)	641
PinAI	ACCGGT	1 cut(s)	738
PkrI	GCNGC	6 cut(s)	341, 911, 1738, 1798, 1927, 2028
PleI	GAGTC	2 cut(s)	1614, 2002
PpsI	GAGTC	2 cut(s)	1614, 2002
PpuMI	RGGWCCY	1 cut(s)	619
PscI	ACATGT	2 cut(s)	226, 1537
PshBI	ATTAAT	3 cut(s)	278, 1404, 1481
Psp5II	RGGWCCY	1 cut(s)	619
PspEI	GGTNACC	1 cut(s)	1854
PspFI	CCCAGC	2 cut(s)	185, 2093
PspN4I	GGNNCC	4 cut(s)	159, 621, 721, 2092
PspPI	GGNCC	4 cut(s)	409, 619, 775, 2090
PspPPI	RGGWCCY	1 cut(s)	619
PspXI	VCTCGAGB	1 cut(s)	1002
PsrI	GAACNNNNNNTAC	2 cut(s)	8, 40
PsuI	RGATCY	2 cut(s)	502, 875
RsaI	GTAC	6 cut(s)	17, 133, 225, 743, 1065, 1364
RsaNI	GTAC	6 cut(s)	16, 132, 224, 742, 1064, 1363
RseI	CAYNNNNRTG	3 cut(s)	293, 545, 1358
SaqAI	TTAA	7 cut(s)	231, 278, 1154, 1242, 1332, 1404, 1481
SatI	GCNGC	6 cut(s)	340, 910, 1737, 1797, 1926, 2027
Sau3AI	GATC	9 cut(s)	502, 559, 875, 1009, 1300, 1468, 1502, 1542, 1754
Sau96I	GGNCC	4 cut(s)	409, 619, 775, 2090
SchI	GAGTC	2 cut(s)	1615, 2003
ScrFI	CCNGG	2 cut(s)	724, 725
SduI	GDGCHC	3 cut(s)	162, 724, 1643
SfaNI	GCATC	3 cut(s)	172, 1110, 1991
SfcI	CTRYAG	1 cut(s)	2034
Sfr274I	CTCGAG	1 cut(s)	1002
SfuI	TTCGAA	1 cut(s)	1763
SinI	GGWCC	2 cut(s)	619, 2090
SlaI	CTCGAG	1 cut(s)	1002
SmaI	CCCGGG	1 cut(s)	725
SmiMI	CAYNNNNRTG	3 cut(s)	293, 545, 1358
SmlI	CTYRAG	3 cut(s)	841, 1002, 1705
SmoI	CTYRAG	3 cut(s)	841, 1002, 1705
SpeI	ACTAGT	1 cut(s)	218
SsiI	CCGC	3 cut(s)	1396, 1847, 2026
SspI	AATATT	1 cut(s)	1789
SspMI	CTAG	2 cut(s)	219, 1554
StyD4I	CCNGG	2 cut(s)	722, 723
StyI	CCWWGG	2 cut(s)	333, 1548
TaaI	ACNGT	3 cut(s)	10, 154, 199
TaiI	ACGT	1 cut(s)	814
TaqI	TCGA	8 cut(s)	344, 715, 859, 1003, 1199, 1303, 1763, 2001
TatI	WGTACW	4 cut(s)	131, 223, 1063, 1362
TauI	GCSGC	1 cut(s)	2029
TfiI	GAWTC	3 cut(s)	99, 1685, 1883
Tru1I	TTAA	7 cut(s)	231, 278, 1154, 1242, 1332, 1404, 1481
Tru9I	TTAA	7 cut(s)	231, 278, 1154, 1242, 1332, 1404, 1481
TscAI	CASTG	2 cut(s)	202, 1648
TseFI	GTSAC	1 cut(s)	199
TseI	GCWGC	5 cut(s)	339, 909, 1736, 1796, 1925
Tsp45I	GTSAC	1 cut(s)	199
TspDTI	ATGAA	6 cut(s)	696, 822, 1218, 1904, 1927, 2079
TspGWI	ACGGA	2 cut(s)	1586, 1653
TspMI	CCCGGG	1 cut(s)	723
TspRI	CASTG	2 cut(s)	202, 1648
Van91I	CCANNNNNTGG	1 cut(s)	641
VpaK11BI	GGWCC	2 cut(s)	619, 2090
VspI	ATTAAT	3 cut(s)	278, 1404, 1481
XagI	CCTNNNNNAGG	2 cut(s)	167, 1552
XapI	RAATTY	4 cut(s)	896, 1558, 1906, 1934
XceI	RCATGY	2 cut(s)	230, 1541
XcmI	CCANNNNNNNNNTGG	2 cut(s)	89, 411
XhoI	CTCGAG	1 cut(s)	1002
XmaI	CCCGGG	1 cut(s)	723
XmiI	GTMKAC	1 cut(s)	2037
XspI	CTAG	2 cut(s)	219, 1554

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.