FvH4_2g01950

glomerular visceral epithelial cell migration

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
1662961 .. 1679647
16687 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g01950.t3

Sequence Viewer

Length: 5883 bp
ATGGCCACCGTCGACGCCTCTCTCTGGTGGGACCCCTTCTCTCTCTTACTCACCGACCTCGAGAACGCTCCTCTCTCCGACGAGCTCCCTCCCAATCTGGTCAAGAAATTGAAGGCCAATCACGCCTGGTTCGTCGACACAGTCTCCCTCTTCAAGCCGCCCAGCGAGAAATCGAAGGCCGCTTTGGATTCACAGCTCGTCAAAATCGGCTCTCACCAGCTGGATGTCAAGCCTGAATTGAAAGACAAGGCTCTCACTATCAGCTCCTATTTGTGTCTAGATGAGGTGCAATCGTACATTCTCGTGGAGAGGTCTCTTAAGGAAAACAATGTAGCTCTTGACTCTGAGGCGCACGAGTATGTTCATGCGGTGTTGATTCACTATTACATTGAGCGGCAGTGCTTGCTGAAGTGTACCAGGAGTATTCTCATGCTTGCTTTGTCTCTAGGAATTGACTCTGAAGAACGTAACAGTATTAAGGAGGAAGCACTGAAGTTGATTTCTGATGGATTGGAGAAGAAATTAATATATGTGCTGCAAGACCTTTTATCTTCCAATCCCCCTGAAGAAATGGATGTTGATCTTTTCAGTTTGTGGGCTGAGGAGACACTAATCGAAGACAATTTGGTTTTGGATATTCTTTTCCTTGCTTATTGTGAGTCACTTTGTACTTGCAAAGGTGAAACATGGAAAGCATTATGCTTGCTCTATAAGGGAATTTTATCTGGGTCATCTAACTTTGAAAAGCTGGCAATATCAACTGAAGCACTACATTCTTCTTACCAAGCCAAAGTTCAGCTTCTTCTAATTCTAATAGAAACCCTAGACCTGGAAAGTCTTCTTCGAATGGTCCATGATGAAATACCTTTCAGGAATGGTGAATCTGCTATTACTTTGGCTGATATCCAAGAGATTGAAGCAATAATTTCAACGTTAAATGCGTTTGAAACAAAAGAGGCGGGCCCATTAATTCTTGCATGGGCAGTGTTTCTTTGTCTGATTTCATCACTTCCGGGCAAAGAAGAAAATGACATACTAATGGAAATTGATCATGTTGGTTACGTTCGCCAAGCATTTGAGGCGTCATCTTTGACTTATTTTGTAGAAATCCTTGAAAGTGATGTGTTGAAGGAATCTGATGGGCCTGTTGCTGGTTATCTGAGTGTGTTGAGAACTATTATATCTGCATTTATCGCAGCTTATGAGATCAATCTCCAGATGGAAGATGGCACTCTTATGTTAATACTGGATATTCTTTGCAAAATCTATCAGGGAGAGGAGTCACTTTGTATCCAGTTCTGGGACCGAGGAAGTTTTATTGATGGTCCTATCCGGTGTCTTCTTTGCAACTTAGAGAGTGAATTTCCTTTCAGGACTGTGGAGCTTGTTCGCCTTCTATCATCCCTTTGTGAAGGAACTTGGCCTGCTGAATGTGTGTACAACTTTCTGGATAAGTCTGTTGGGGTATCATCCTTGTTTGAGATTGCGAACAATTCCTTTAGGGATGTCCTCTCTCAAACTGTTGAGACGAACTTCCCATTGCATGTTCCTGGACTTGAAGGATTGGTCATTCCCAGTAAAACTTGTGGCAGTATATTGAGATTAGTTGGTGAAAATACTGCTCTTGTTCGATGGGAGTATACACAATCGGGGGTGCTAGTGTTGCTCATGCGCTTGGCCCAAGAGCTATATTTCAAAAGAAATGAAGAAGTTCTTCTTATCCTCAACCTGCTTAGCAGGATGGTTACCTTTAGCATGGCTGTGTGCTTTGCCTTGATGGATATTGGGAGCTCTTTGCATTTCCAATCAACTGGCATGAGTGGGCAGAATAACATGTGGGTGGTTGAGATGATTAGCACTTTAGTGAGAAGGTTATCTCCTACTCCTAGTGGTGCTGCTCTAATGTCCGTGGCTATAAACACTTTGGCAAAGATGTTAAAATGTTCCCCTTTTCATGTTGCTGAGGTGGCCTTAAAAGCAAATATGTTTGATTTTGAGATTGGCAACAATGGTTCATCAAGTGAATCATGGCTACTTTCTGGAAAACTGGCGAAGATGCTTATAATTGACTGTGAACATAATGATAGTGACTGCACATTGACTATATCAGTGCTGGACTTTACTCTGCAGTTCATGGAATCAGGTGTGAAGAATGATGGTGTACTGGCTTTAATTGTTTTCTCTCTTCAGTATGTTCTAGTTAACCACGTGTACTGGAAATACAAGTTAAAGCATACTAGATGGAGAGTGACATTAAAGGTGCTTGAAGTGTTGAAATGGTGTATTACATCAACTTGCTCTGGAAACCTGGATGAAGTCATCCTGGACAGGATATTCTGTGATTCATCCATCCATAATACTCTCTTTCAGATTGTTTGTACAACACCACAAACATTAGAGAGACTATGCTCCAGTCGTCTTATTGAGCTAACAGAGGTTGAAGGTTTACAGCTGGCTATATGTTCTGTTCTAGATGTTCTTTTCATCATGCTCTCCAAATTTACTAAGGATACATCGTCCAGCCTTCCAATTTTTCACCAAGCAGTTTTCTCCTCAGCTACAAAACCTATTCCTTTAGTTGCAGCTCTTGTATCATTCATATCTTATTCTCGCAATCCGCAAATTCAAGTTGGTGCTGCTAGGGTTCTGTCAGTGTTCTTGATGAGTGCAGATATTATCCAACCATATTTGTTTGGAAGCAGCTTTGGCCTAGATGATACACAGATTGGAGATCTGAGGCATGGAATTAGTGACATAATACTTGAGCAGTCAGTACTGAATGAAGATCTCTTTGTTGCTGTAGTCAACCTGCTCACTTCTGCTGCACGTTATCAGCCTGCTTTTCTTGTTGCTGTGTTATCCACCAAAGTGAATAAAGATGTCCAACTGAGTAATTCTGCTGATGTGAAGCTGCCAACAAATGAAGTTCTATCGAGGTCGTCTGAGTTTGAAAAAGCAAGTGTTGTGGATGCAGTGCTGCATCATGTTAGAAGATCTAATGATCTTATCAACAGCAATCCCCGTATACTTCTGAATGTTCTCAACTTTCTAAGAGCTCTGTGGCAAGATGCTGCTCGGTACTTGGATATTTTAGAATGCGTGAAACGCTCTGAAAATTTCTGGAGAAACTTGTCTAGTTCTATTACAGTAATTTTGAGTGCGAAAGCTTGTCCACCTGAGAATTTAACTGAGGCCGAAGCTGATGATTTCGGATATAGATATCAGTGTGAATCTTCGATATTAGAAATAATGGCGCATGATGTGTTCCTGCAAAAGAAACTGTTACATGCAGAGTCACTTGTAAAACAAGCGACTGAATCACAGGGCAAGATACAGAATACAGGGAGAACTGAAAAATCTGAAGGAGAAAGTCTAGAGGATATTTTATCAGCCTGGTGTGGAAGCTCAGTTTGGGGCAATCTGACCAAGTCACTAAGTCATAGTGAATATGACACCAGTCTATATTTGCGGGCAAAGGTTGCTGCCAGTTCAGTCACCGCCCTTGTCATGGTGAAATTAGCACAGGGTGATGCTGGAAGTTTGTCCGTGCCATTATTTGAGAAGTCCCGCATCCTTTCAAATAAGCTCAGAAGTCATCCTGCTTTTTCGGAAGTGTTAGCTAAATACTCACTGCGTAGTTACAGTGCAGAGAAGGAACAAAATTATTTGATACTCAGCGATCTTTATTATCATCTGCAAGGGGAGGTAGAAGGCCGTGAAATTGGTGCTGGATCGTTTAAAGCACTCTCTCGGTTCCTAATTGAATCAAACATTTTTCAGACATACCAACTAAAGTATGATGGCGATCTTTTTATAACTGGCAAAGATGCATACATGTTTGATCTGGAACGTATAAGAGCTGATTTGGGATTAGATTTTTGGGATTATTCAACGTGGAAGGATTCAAAGGCGATTGCTGAAACAATGTTGCATCACATGAAAAATGTGAACTCAATGGTATTCCTCACAAGCTCGAAACTTTCCGCACTGAGAGCATTAAGAAGTGTTCTAACTGTATACTTGGATGATTCACTGGAGGCGAAGAGCACAGCGCAAGAGATGTCTGATCAACTGGTTTTCCCATGCATAGATCACATATGCCAGAATTTCCTTGATACAGTAGAATTATTGGCTCCAGAACTTGGTGCCTCTGAAGAAATCTTTCACTTCCTTGCAGCTCAAGCAGAATTGCTTCTATACCTTATGATTTCTGCACACAAGAGCTTGCCTCCATCTGTTTGCATTCTTGTGCTAAAAACATCAGCTGCTGGCCTCAAAGTGTTGAGTGATTTCCAACCATTAGTTACTGGGTCATCAGTTTCTGTGGTTAGCTCTACAGTCAAGCTGTTACTGATGCTGCTTCTCTCAGCAGTGAAGTTAAGTTTGGTTGGGGGAAGAGATATGGTATCTGTTGAAGACATGGCTAAAATATCTAATATGAGTCTACGTCTGCTACCAATTCTCTGTAACCATATTGCTAGTGCTGAGGATTGCAGACTCTCGCTCACTAATATGGACTTGATATTGAGAAATTTCTTGACTCCCAACACTTGGTTTCCCCTCATACAGAATCACCTCCAGCTTCAGCATGTTATTCTGAAACTTCAAGATAGGAAGTCTCTCGAGTCTGTGCCTATTATAATGAAGTTCTTTTTGACTCTTGCTCGTGTGAGGCAGGGTGCAGAGATGCTTATAAATCACGGATTTCTATCGTCTCTGAGATTCTTGTTTACTGAATACTTGGATGATAGGTCTGCTTCAGTAACAATGGCGAATAGTCTTTCCAACTCATCTGACATAATGGAAAAGCCTAAACGAATATGGGGACTGGGTTCAGCTGTCATCACAGCTATGGTTCAGTCACTAGGAGACAGTTCTGCTTGTTCTGATGTTGTGGAGAATGTAATACCCTACTTCTTTTCCGAGAAAGCATATATCATTTCATACTATCTCAGTGCACCGGAGTTCCCATCTGATGATCATGACAAGAAAAGACTTCGTGCTCAGCAGAGACAAACCTCCCTTACTGAGCTTAAAGAAACTGAGCACACTCTCATGCTAATGTGTGTGCTGGCAAAACATTGGAATACATGGGTTAAGGCCATGAAAGAATTGGATTCCCAGTTGAGAGAGAAAAGCATCCATCTTTTAGCATTCATCAGCAGGGGAACTCAACGCCTTGGAGAAACTGCAAGTTCTAGTGCCCCACTCATATGTCCTCCTATGCTTAAAGATGAATTAAATAGTTGCAAGAAACCCTCGTTTGTCAACAGTAGTTGTGGATGGTTTGCTCTTTCACCACTTGGTTGTGTTTCAAAACCAAAAGTGTCAGCTGCCTCAATCACATCAATGGCGCTGACTACTAAAACTCAAGCAACTGCAAATGGATATCACATTTCCCAATCGCACTTCTCAGACATTATTGCCCTGCAGATTTACAAAAATACTTTTCTCTTATTGAAGTTTCTCTGTTTACAAGCTGAGTGTGCTTCTAGAAGGGCAGAGGAGGTGGGATTTGTTGATCTTGACCATTTTCCTGAGCTTCCAATGCCTGAGATCTTGCATGGCTTACAGGATCAAGCAATTGCCATCATTACAGAAGTGTGTGAAGCTAACAGAGTGAAGGAGATTCAAATCGAAGTCCAGTCTATATGTTGTTTATTGCTACAAATAATGGAGATGGCGATGTACTTGGAACTTTGTGTTCACCAGATATGTGGCATAAGACCAGTGCTAGGGCGTGTAGAAGATTTTTCGAAGGAAGTTAAACTGTTGATAAAAGCAACGGAGACGCATGCTTTCATGAAACCGTCTCTGAAGTCCTTGAAGCAGATAATGGTGGTTGTCTATCCCGGATTGGTACAGGCAGAGGACTTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1961

Amino Acids

218.96

Weight (kDa)

5.27

Isoelectric Point (pI)

42.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 2063, 3815, 4640, 4694
Acc36I ACCTGC 2 cut(s) 1737, 2817
AccB1I GGYRCC 1 cut(s) 4145
AccB7I CCANNNNNTGG 2 cut(s) 4142, 4551
AccBSI CCGCTC 1 cut(s) 394
AccI GTMKAC 6 cut(s) 12, 135, 1640, 3025, 4017, 4444
AclI AACGTT 1 cut(s) 932
AclWI GGATC 2 cut(s) 3739, 5583
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 8 cut(s) 717, 1361, 2498, 2622, 3115, 3181, 4105, 4531
AcvI CACGTG 1 cut(s) 2209
AcyI GRCGYC 2 cut(s) 15, 1082
AdeI CACNNNGTG 1 cut(s) 3527
AfiI CCNNNNNNNGG 8 cut(s) 24, 829, 1151, 1300, 3508, 4142, 4551, 5735
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 3 cut(s) 1833, 2208, 3834
AjnI CCWGG 7 cut(s) 125, 416, 828, 1549, 2307, 2322, 3392
AjuI GAANNNNNNNTTGG 8 cut(s) 167, 199, 777, 809, 3394, 3426, 4367, 4399
AleI CACNNNNGTG 2 cut(s) 1862, 2867
Alw21I GWGCWC 7 cut(s) 87, 1793, 3058, 4049, 4960, 5005, 5049
Alw44I GTGCAC 1 cut(s) 4956
AlwI GGATC 2 cut(s) 3739, 5583
AlwNI CAGNNNCTG 2 cut(s) 4268, 4322
Ama87I CYCGRG 2 cut(s) 59, 4622
ApaI GGGCCC 1 cut(s) 965
ApaLI GTGCAC 1 cut(s) 4956
ApoI RAATTY 8 cut(s) 717, 1361, 2498, 2622, 3115, 3181, 4105, 4531
AseI ATTAAT 2 cut(s) 524, 968
Asp700I GAANNNNTTC 5 cut(s) 837, 1710, 1713, 4161, 4191
AspLEI GCGC 5 cut(s) 352, 1674, 3256, 4054, 5356
AspS9I GGNCC 8 cut(s) 31, 850, 961, 962, 1142, 1303, 1325, 1678
AsuC2I CCSGG 2 cut(s) 1014, 5853
AsuII TTCGAA 2 cut(s) 844, 5756
AvaI CYCGRG 2 cut(s) 59, 4622
AvaII GGWCC 4 cut(s) 31, 850, 1303, 1325
BaeGI GKGCMC 3 cut(s) 965, 4960, 5206
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 4145
BanII GRGCYC 4 cut(s) 87, 965, 1793, 3058
BauI CACGAG 3 cut(s) 302, 353, 4665
BbrPI CACGTG 1 cut(s) 2209
BbsI GAAGAC 4 cut(s) 624, 830, 1331, 4422
Bbv12I GWGCWC 7 cut(s) 87, 1793, 3058, 4049, 4960, 5005, 5049
BbvCI CCTCAGC 4 cut(s) 600, 1962, 2554, 4485
BceAI ACGGC 1 cut(s) 3699
BciT130I CCWGG 7 cut(s) 127, 418, 830, 1551, 2309, 2324, 3394
BciVI GTATCC 2 cut(s) 1301, 2503
BclI TGATCA 3 cut(s) 1048, 4066, 4978
BcnI CCSGG 2 cut(s) 1014, 5853
BfmI CTRYAG 4 cut(s) 2126, 2799, 4335, 5429
BfoI RGCGCY 1 cut(s) 5357
BfrI CTTAAG 1 cut(s) 317
BfuAI ACCTGC 2 cut(s) 1737, 2817
BfuI GTATCC 2 cut(s) 1301, 2503
BglII AGATCT 4 cut(s) 2731, 2785, 2993, 5556
BlpI GCTNAGC 2 cut(s) 1733, 5004
BmcAI AGTACT 1 cut(s) 2775
Bme1390I CCNGG 9 cut(s) 127, 418, 830, 1014, 1551, 2309, 2324, 3394, 5853
Bme18I GGWCC 4 cut(s) 31, 850, 1303, 1325
BmeT110I CYCGRG 2 cut(s) 59, 4622
BmgT120I GGNCC 8 cut(s) 31, 850, 961, 962, 1142, 1303, 1325, 1678
BmiI GGNNCC 7 cut(s) 32, 33, 963, 1304, 3755, 4134, 4147
BmrFI CCNGG 9 cut(s) 127, 418, 830, 1014, 1551, 2309, 2324, 3394, 5853
BmrI ACTGGG 4 cut(s) 1569, 4317, 4838, 5116
BmuI ACTGGG 4 cut(s) 1569, 4317, 4838, 5116
BoxI GACNNNNGTC 1 cut(s) 3456
BpiI GAAGAC 4 cut(s) 624, 830, 1331, 4422
BplI GAGNNNNNCTC 2 cut(s) 4213, 4245
BpmI CTGGAG 6 cut(s) 1199, 2395, 3142, 4055, 4119, 4562
Bpu10I CCTNAGC 5 cut(s) 600, 1962, 2554, 4485, 5538
Bpu1102I GCTNAGC 2 cut(s) 1733, 5004
Bpu14I TTCGAA 2 cut(s) 844, 5756
BpuEI CTTGAG 3 cut(s) 2783, 4164, 5355
BpuMI CCSGG 2 cut(s) 1014, 5853
BsaAI YACGTR 1 cut(s) 2209
BsaBI GATNNNNATC 4 cut(s) 579, 3804, 4708, 5633
BsaHI GRCGYC 2 cut(s) 15, 1082
BsaI GGTCTC 1 cut(s) 318
BsaJI CCNNGG 3 cut(s) 1306, 1908, 5179
BsaWI WCCGGW 2 cut(s) 1332, 4960
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bsc4I CCNNNNNNNGG 8 cut(s) 24, 829, 1151, 1300, 3508, 4142, 4551, 5735
Bse3DI GCAATG 1 cut(s) 1538
Bse8I GATNNNNATC 4 cut(s) 579, 3804, 4708, 5633
BseBI CCWGG 7 cut(s) 127, 418, 830, 1551, 2309, 2324, 3394
BseDI CCNNGG 3 cut(s) 1306, 1908, 5179
BseJI GATNNNNATC 4 cut(s) 579, 3804, 4708, 5633
BseLI CCNNNNNNNGG 8 cut(s) 24, 829, 1151, 1300, 3508, 4142, 4551, 5735
BseMI GCAATG 1 cut(s) 1538
BseRI GAGGAG 5 cut(s) 60, 617, 1292, 2542, 5519
BseSI GKGCMC 3 cut(s) 965, 4960, 5206
BseYI CCCAGC 1 cut(s) 161
BsgI GTGCAG 6 cut(s) 2077, 2688, 2808, 3666, 4197, 4701
BshNI GGYRCC 1 cut(s) 4145
BsiHKAI GWGCWC 7 cut(s) 87, 1793, 3058, 4049, 4960, 5005, 5049
BsiHKCI CYCGRG 2 cut(s) 59, 4622
BsiSI CCGG 4 cut(s) 1013, 1333, 4961, 5853
BslFI GGGAC 4 cut(s) 44, 1316, 3550, 4839
BslI CCNNNNNNNGG 8 cut(s) 24, 829, 1151, 1300, 3508, 4142, 4551, 5735
BsmBI CGTCTC 4 cut(s) 1520, 4719, 5783, 5817
BsmFI GGGAC 4 cut(s) 44, 1316, 3550, 4839
BsmI GAATGC 3 cut(s) 3101, 4242, 5153
Bso31I GGTCTC 1 cut(s) 318
BsoBI CYCGRG 2 cut(s) 59, 4622
Bsp119I TTCGAA 2 cut(s) 844, 5756
Bsp120I GGGCCC 1 cut(s) 961
Bsp1286I GDGCHC 9 cut(s) 87, 965, 1793, 3058, 4049, 4960, 5005, 5049, 5206
Bsp1407I TGTACA 2 cut(s) 1437, 2378
Bsp1720I GCTNAGC 2 cut(s) 1733, 5004
BspHI TCATGA 2 cut(s) 4981, 5802
BspLI GGNNCC 7 cut(s) 32, 33, 963, 1304, 3755, 4134, 4147
BspMAI CTGCAG 2 cut(s) 2130, 5433
BspMI ACCTGC 2 cut(s) 1737, 2817
BspPI GGATC 2 cut(s) 3739, 5583
BspQI GCTCTTC 1 cut(s) 4037
BspT104I TTCGAA 2 cut(s) 844, 5756
BspT107I GGYRCC 1 cut(s) 4145
BspTI CTTAAG 1 cut(s) 317
BspTNI GGTCTC 1 cut(s) 318
BsrBI CCGCTC 1 cut(s) 394
BsrDI GCAATG 1 cut(s) 1538
BsrGI TGTACA 2 cut(s) 1437, 2378
BssECI CCNNGG 3 cut(s) 1306, 1908, 5179
BssNAI GTATAC 3 cut(s) 1641, 3026, 4018
BssNI GRCGYC 2 cut(s) 15, 1082
BssSI CACGAG 3 cut(s) 302, 353, 4665
BssT1I CCWWGG 1 cut(s) 5179
Bst1107I GTATAC 3 cut(s) 1641, 3026, 4018
Bst2BI CACGAG 3 cut(s) 302, 353, 4665
Bst2UI CCWGG 7 cut(s) 127, 418, 830, 1551, 2309, 2324, 3394
Bst6I CTCTTC 4 cut(s) 155, 2190, 4037, 4390
BstACI GRCGYC 2 cut(s) 15, 1082
BstAFI CTTAAG 1 cut(s) 317
BstAPI GCANNNNNTGC 2 cut(s) 403, 3479
BstAUI TGTACA 2 cut(s) 1437, 2378
BstBAI YACGTR 1 cut(s) 2209
BstBI TTCGAA 2 cut(s) 844, 5756
BstDSI CCRYGG 1 cut(s) 1908
BstEII GGTNACC 1 cut(s) 1744
BstH2I RGCGCY 1 cut(s) 5357
BstHHI GCGC 5 cut(s) 352, 1674, 3256, 4054, 5356
BstNI CCWGG 7 cut(s) 127, 418, 830, 1551, 2309, 2324, 3394
BstNSI RCATGY 6 cut(s) 1547, 1837, 3290, 3838, 4592, 5798
BstPAI GACNNNNGTC 1 cut(s) 3456
BstPI GGTNACC 1 cut(s) 1744
BstSCI CCNGG 9 cut(s) 125, 416, 828, 1012, 1549, 2307, 2322, 3392, 5851
BstSFI CTRYAG 4 cut(s) 2126, 2799, 4335, 5429
BstSLI GKGCMC 3 cut(s) 965, 4960, 5206
BstV2I GAAGAC 4 cut(s) 624, 830, 1331, 4422
BstX2I RGATCY 4 cut(s) 2731, 2785, 2993, 5556
BstXI CCANNNNNNTGG 2 cut(s) 1811, 5717
BstYI RGATCY 4 cut(s) 2731, 2785, 2993, 5556
BstZ17I GTATAC 3 cut(s) 1641, 3026, 4018
BsuI GTATCC 2 cut(s) 1301, 2503
BtgI CCRYGG 1 cut(s) 1908
BtgZI GCGATG 1 cut(s) 5699
BtsI GCAGTG 5 cut(s) 404, 990, 2979, 3629, 4377
BveI ACCTGC 2 cut(s) 1737, 2817
CaiI CAGNNNCTG 2 cut(s) 4268, 4322
CciI TCATGA 2 cut(s) 4981, 5802
CfoI GCGC 5 cut(s) 352, 1674, 3256, 4054, 5356
Cfr13I GGNCC 8 cut(s) 31, 850, 961, 962, 1142, 1303, 1325, 1678
CseI GACGC 3 cut(s) 23, 1071, 5800
CspCI CAANNNNNGTGG 2 cut(s) 2946, 2981
DraI TTTAAA 1 cut(s) 3739
DraIII CACNNNGTG 1 cut(s) 3527
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 155, 2190, 4037, 4390
EarI CTCTTC 4 cut(s) 155, 2190, 4037, 4390
Ecl136II GAGCTC 3 cut(s) 85, 1791, 3056
Eco130I CCWWGG 1 cut(s) 5179
Eco24I GRGCYC 4 cut(s) 87, 965, 1793, 3058
Eco31I GGTCTC 1 cut(s) 318
Eco32I GATATC 3 cut(s) 904, 3221, 5390
Eco47I GGWCC 4 cut(s) 31, 850, 1303, 1325
Eco53kI GAGCTC 3 cut(s) 85, 1791, 3056
Eco72I CACGTG 1 cut(s) 2209
Eco88I CYCGRG 2 cut(s) 59, 4622
Eco91I GGTNACC 1 cut(s) 1744
EcoICRI GAGCTC 3 cut(s) 85, 1791, 3056
EcoO109I RGGNCCY 1 cut(s) 31
EcoO65I GGTNACC 1 cut(s) 1744
EcoRII CCWGG 7 cut(s) 125, 416, 828, 1549, 2307, 2322, 3392
EcoRV GATATC 3 cut(s) 904, 3221, 5390
EcoT14I CCWWGG 1 cut(s) 5179
EcoT22I ATGCAT 2 cut(s) 3832, 4088
EcoT38I GRGCYC 4 cut(s) 87, 965, 1793, 3058
ErhI CCWWGG 1 cut(s) 5179
Esp3I CGTCTC 4 cut(s) 1520, 4719, 5783, 5817
FalI AAGNNNNNCTT 6 cut(s) 783, 815, 1698, 1730, 1701, 1733
FaqI GGGAC 4 cut(s) 44, 1316, 3550, 4839
FauI CCCGC 3 cut(s) 952, 3462, 3575
FauNDI CATATG 2 cut(s) 4097, 5213
FbaI TGATCA 3 cut(s) 1048, 4066, 4978
FblI GTMKAC 6 cut(s) 12, 135, 1640, 3025, 4017, 4444
FriOI GRGCYC 4 cut(s) 87, 965, 1793, 3058
GlaI GCGC 5 cut(s) 351, 1673, 3255, 4053, 5355
GsaI CCCAGC 1 cut(s) 165
GsuI CTGGAG 6 cut(s) 1199, 2395, 3142, 4055, 4119, 4562
HaeII RGCGCY 1 cut(s) 5357
HapII CCGG 4 cut(s) 1013, 1333, 4961, 5853
HgaI GACGC 3 cut(s) 23, 1071, 5800
HhaI GCGC 5 cut(s) 352, 1674, 3256, 4054, 5356
Hin1I GRCGYC 2 cut(s) 15, 1082
Hin6I GCGC 5 cut(s) 350, 1672, 3254, 4052, 5354
HinP1I GCGC 5 cut(s) 350, 1672, 3254, 4052, 5354
HincII GTYRAC 5 cut(s) 13, 136, 2203, 2806, 5269
HindII GTYRAC 5 cut(s) 13, 136, 2203, 2806, 5269
HindIII AAGCTT 1 cut(s) 3165
HpaI GTTAAC 1 cut(s) 2203
HpaII CCGG 4 cut(s) 1013, 1333, 4961, 5853
Hpy99I CGWCG 4 cut(s) 14, 17, 83, 137
HpyCH4IV ACGT 8 cut(s) 466, 932, 1062, 2208, 2827, 3850, 3893, 4447
HpySE526I ACGT 8 cut(s) 466, 932, 1062, 2208, 2827, 3850, 3893, 4447
Hsp92I GRCGYC 2 cut(s) 15, 1082
HspAI GCGC 5 cut(s) 350, 1672, 3254, 4052, 5354
KflI GGGWCCC 1 cut(s) 31
Ksp22I TGATCA 3 cut(s) 1048, 4066, 4978
KspAI GTTAAC 1 cut(s) 2203
LguI GCTCTTC 1 cut(s) 4037
LmnI GCTCC 7 cut(s) 73, 90, 269, 1381, 1788, 2414, 4138
MaeII ACGT 8 cut(s) 466, 932, 1062, 2208, 2827, 3850, 3893, 4447
MbiI CCGCTC 1 cut(s) 394
MfeI CAATTG 1 cut(s) 5583
MflI RGATCY 4 cut(s) 2731, 2785, 2993, 5556
MhlI GDGCHC 9 cut(s) 87, 965, 1793, 3058, 4049, 4960, 5005, 5049, 5206
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 5 cut(s) 102, 2704, 2908, 4318, 4809
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 3832, 4088
MroXI GAANNNNTTC 5 cut(s) 837, 1710, 1713, 4161, 4191
MscI TGGCCA 1 cut(s) 5
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 5 cut(s) 220, 2452, 4265, 4838, 5333
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 4 cut(s) 1013, 1333, 4961, 5853
MspR9I CCNGG 9 cut(s) 127, 418, 830, 1014, 1551, 2309, 2324, 3394, 5853
MunI CAATTG 1 cut(s) 5583
Mva1269I GAATGC 3 cut(s) 3101, 4242, 5153
MvaI CCWGG 7 cut(s) 127, 418, 830, 1551, 2309, 2324, 3394
NciI CCSGG 2 cut(s) 1014, 5853
NdeI CATATG 2 cut(s) 4097, 5213
NlaIV GGNNCC 7 cut(s) 32, 33, 963, 1304, 3755, 4134, 4147
NmuCI GTSAC 9 cut(s) 660, 1281, 2087, 2248, 2750, 3294, 3429, 3493, 4860
NsiI ATGCAT 2 cut(s) 3832, 4088
NspI RCATGY 6 cut(s) 1547, 1837, 3290, 3838, 4592, 5798
NspV TTCGAA 2 cut(s) 844, 5756
OliI CACNNNNGTG 2 cut(s) 1862, 2867
PaeI GCATGC 1 cut(s) 5798
PaeR7I CTCGAG 2 cut(s) 59, 4622
PagI TCATGA 2 cut(s) 4981, 5802
PciI ACATGT 2 cut(s) 1833, 3834
PciSI GCTCTTC 1 cut(s) 4037
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 938
PctI GAATGC 3 cut(s) 3101, 4242, 5153
PdmI GAANNNNTTC 5 cut(s) 837, 1710, 1713, 4161, 4191
PflFI GACNNNGTC 2 cut(s) 140, 3427
PflMI CCANNNNNTGG 2 cut(s) 4142, 4551
PfoI TCCNGGA 3 cut(s) 1549, 2322, 5851
PmaCI CACGTG 1 cut(s) 2209
PmlI CACGTG 1 cut(s) 2209
Ppu21I YACGTR 1 cut(s) 2209
PpuMI RGGWCCY 1 cut(s) 31
PscI ACATGT 2 cut(s) 1833, 3834
PshAI GACNNNNGTC 1 cut(s) 3456
PshBI ATTAAT 2 cut(s) 524, 968
PsiI TTATAA 4 cut(s) 2063, 3815, 4640, 4694
Psp124BI GAGCTC 3 cut(s) 87, 1793, 3058
Psp1406I AACGTT 1 cut(s) 932
Psp5II RGGWCCY 1 cut(s) 31
Psp6I CCWGG 7 cut(s) 125, 416, 828, 1549, 2307, 2322, 3392
PspCI CACGTG 1 cut(s) 2209
PspEI GGTNACC 1 cut(s) 1744
PspFI CCCAGC 1 cut(s) 161
PspGI CCWGG 7 cut(s) 125, 416, 828, 1549, 2307, 2322, 3392
PspN4I GGNNCC 7 cut(s) 32, 33, 963, 1304, 3755, 4134, 4147
PspOMI GGGCCC 1 cut(s) 961
PspPI GGNCC 8 cut(s) 31, 850, 961, 962, 1142, 1303, 1325, 1678
PspPPI RGGWCCY 1 cut(s) 31
PstI CTGCAG 2 cut(s) 2130, 5433
PstNI CAGNNNCTG 2 cut(s) 4268, 4322
PsuI RGATCY 4 cut(s) 2731, 2785, 2993, 5556
PsyI GACNNNGTC 2 cut(s) 140, 3427
PvuII CAGCTG 5 cut(s) 220, 2452, 4265, 4838, 5333
SacI GAGCTC 3 cut(s) 87, 1793, 3058
SalI GTCGAC 2 cut(s) 11, 134
SapI GCTCTTC 1 cut(s) 4037
Sau96I GGNCC 8 cut(s) 31, 850, 961, 962, 1142, 1303, 1325, 1678
ScaI AGTACT 1 cut(s) 2775
ScrFI CCNGG 9 cut(s) 127, 418, 830, 1014, 1551, 2309, 2324, 3394, 5853
SduI GDGCHC 9 cut(s) 87, 965, 1793, 3058, 4049, 4960, 5005, 5049, 5206
SfcI CTRYAG 4 cut(s) 2126, 2799, 4335, 5429
Sfr274I CTCGAG 2 cut(s) 59, 4622
SfuI TTCGAA 2 cut(s) 844, 5756
SgrDI CGTCGACG 1 cut(s) 11
SinI GGWCC 4 cut(s) 31, 850, 1303, 1325
SlaI CTCGAG 2 cut(s) 59, 4622
SmlI CTYRAG 6 cut(s) 59, 317, 2762, 4179, 4622, 5370
SmoI CTYRAG 6 cut(s) 59, 317, 2762, 4179, 4622, 5370
SphI GCATGC 1 cut(s) 5798
SstI GAGCTC 3 cut(s) 87, 1793, 3058
StyD4I CCNGG 9 cut(s) 125, 416, 828, 1012, 1549, 2307, 2322, 3392, 5851
StyI CCWWGG 1 cut(s) 5179
TaiI ACGT 8 cut(s) 469, 935, 1065, 2211, 2830, 3853, 3896, 4450
TaqII GACCGA 1 cut(s) 1320
TatI WGTACW 7 cut(s) 668, 1437, 2161, 2211, 2378, 2773, 5688
TauI GCSGC 3 cut(s) 160, 182, 397
TseFI GTSAC 9 cut(s) 660, 1281, 2087, 2248, 2750, 3294, 3429, 3493, 4860
Tsp45I GTSAC 9 cut(s) 660, 1281, 2087, 2248, 2750, 3294, 3429, 3493, 4860
TspGWI ACGGA 4 cut(s) 1897, 3535, 4716, 5801
Tth111I GACNNNGTC 2 cut(s) 140, 3427
Van91I CCANNNNNTGG 2 cut(s) 4142, 4551
Vha464I CTTAAG 1 cut(s) 317
VneI GTGCAC 1 cut(s) 4956
VpaK11BI GGWCC 4 cut(s) 31, 850, 1303, 1325
VspI ATTAAT 2 cut(s) 524, 968
XapI RAATTY 8 cut(s) 717, 1361, 2498, 2622, 3115, 3181, 4105, 4531
XbaI TCTAGA 4 cut(s) 277, 2470, 3373, 5492
XceI RCATGY 6 cut(s) 1547, 1837, 3290, 3838, 4592, 5798
XcmI CCANNNNNNNNNTGG 2 cut(s) 1223, 5110
XhoI CTCGAG 2 cut(s) 59, 4622
XmiI GTMKAC 6 cut(s) 12, 135, 1640, 3025, 4017, 4444
XmnI GAANNNNTTC 5 cut(s) 837, 1710, 1713, 4161, 4191
ZrmI AGTACT 1 cut(s) 2775
Zsp2I ATGCAT 2 cut(s) 3832, 4088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.