Rmu_ssc0000087.1_g000004

glomerular visceral epithelial cell migration

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000087.1
Physical Location & Seq
Forward (+)
12222 .. 31175
18954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000087.1_g000004.1.cds

Sequence Viewer

Length: 6225 bp
atgcgccccagaccatccttcccgacgccggcgagctccgatgtcaccactccgctgccacgcatcaccaagccacgccgccgcaaccccacgccacttcgccgcctggccacgctgcagacagatccgactacctgcaaacggcctcaaccagatccaagatcgcgaccaaaccaggtcagtcctacgtccaaatcccaccctgccgaccaaaaaaacgttggcacattttcgccgaagcgcgaaaaaaatcaaacagacataaacccccaactgcgaactctctctctctctggggtttcgaagctcctccctccttcaatggccaccgacgtcgacgcctctctctggtgggaccccttctctctcttactcaccgacctcgagaacgctcctctctccgacgacctccctcccaatctggtcaagaaattgaaggccaatcacgcctggttcgtcgacacagtcttcctcttcaagccgcccagtgagaaatcaaaggcggctttggattcacagcttgtcaaaatcgggtcgcaccagctggatatcaagcctgaattgaaagataaggctctgactatcagctcctatttgtgtctggatgaggtgcaatcgtacattcttgtcgaaaggtctctcaaggacaacaatgtagctcttgactctgtggtgcacgagtatgttcatgcggtgttaattcactattatattgagcgacagtgcttgctgaagtgtaccaggagtattctcatgcttgctttgtctctagaaactttctctggagaaggaactgctattaaggaggaagcactaaagttgatttctgatggattggagaagaaattaatatctgtgctgcaagaccttttatcttccaatccccctgaacaaatggatgttgaccttttcagcttgtgggctgaggagacactaattgaagacaatttggttttggatattcttttcctggcttattatgagtcactttgtacttgtaatggtgaaacgtggaaaggattgtgcttgctctataagggaattttatctgggtcttctaactttgaaaagctggcaatatcaactgaagcactacgttcttcttaccaagccaaagttcagcttcttctaattcttatagaaaccctagacctggaaagttgtctccaaatggtccatgatgaaatgcctttcaggcacggtgcatctgctattactttggctgatatccaagagattgaagcaataatttcaactttaaatgcatttgaaacaaaagaggcaggcccattaattctggcatgggcagtctttctttgtctgatttcatcacttccaggcaaagaagaaaacaacatactaatggaaattgatcatgttggttatgttcgccaagcattcgaggcgtcatctttgacttattttgtagaaatccttgaaagtgatgtattgaaggaatctgatgggtctgttactggttatcgaagtgtgttgagaactattatttctgcatttatcgcatcttatgagatcaatcttcagatggaagaaggcactcttatgttaatactggatattctttgcaaaatttatcagggagaggagtcactttgtatccagttctgggaccgaggaagttttattgatggtcctatccggtgtcttctttacaacttagagagtgaatttcctttcaggactgtggagcttgttcgccttttatcatccctttgtgagggaacgtggcctgctgaatgtgtgtacaactttttagataagtctgttggtgtatcatccttgtttaagattgcgaacaattcctttagggatggcatctctcaaactgttgagacggacctcccgttgcatgtccctggacttgaaggtttggtcatccccagtaaaacttgtgggcatatattaagattagttggtgaaaatactgctcttgttcgatgggagtatacacaatccggggtgctagtgttgcttatgcgcttggcccaagagctgtatttcaaaagaaatgaagaagttcttcttatcctcaacctccttagccagatggttacctttagcatggctgtatgctttgctttgatggatattgggagctctttgcatttccaatcaactggcatgagtgggcagaatagcatgtgggtggttgagatgattagcactttagtcagaaggttatctcctactcctagcggtgctgctctaatgtccgtggctatcaacattttggcaaagatgttaaaatgttccccttctcatgttgctgaggtagccttaaaagcaaatatgtttgatttcgagattggcgacaatggttcatcaagtgaatcatggttactttctggaaaactggcgaagatgcttgtaattgattgtgagcataatgatagtgactgcgcattgactatatcagtgctggactttactctgcagttcatggaatcaggtgtgaagaatgatgctgtactggctttaatcgttttctctcttcagtatgttctcgttaaccatgagtactggaaatacaagttaaagcatactcgatggagagtaacattaaaggtgcttgaagtgttgaaaaggtgtattacatcaacttcatgctctgaaaagctggatgaagtcatcctagataggatattctgtgattcttccatccataatactctctttcaaattgtttgtacaacaccacaaatgttagagagactatgtgtcagccgtcttattgagctaacagagattgaaggtttacagctggctatatgttctgttctagatgttcttttcatcatgctctccaaattttctaagggtacattttccagccttccaatttttcaccaagcagttttctcctcagcaacaaaaccaattcctgtagttgcagcgctcgtatcgttcatatcttattctcgcaatccacgaatacaagttggtgctgctagggttttgtcagtgttcttgatgatggcagatattatccaaccatatttgtttggaagcagctttggcctagatgacatacagattgaagatctgaggcatggtattagttacatattacttgagcagtcagtatcgaatgaagatctctttgttgctgtagtcaatctgctcacttctgctgcacgttatcagcctgcttttcttgttgctgtgttatccaccaaattcaatgaaggtgtccaactgagtaatgctggtgatatgaagctgccaacaaatgaagttctgttgaggtcatctgagtctgaaaaggcaagtgttgtggatgcagttctgcattatgttagaagatctaatgatcttatcaacagcaatccccgtatactgctgaatgttctgaactttctaagagctctgtggcaagacgctgctcggtactctggtattttggaatgcgtgaaaggctctgaaaatttctggaaaaacttgtcgagttctatttccaaaatttctagtgtggaagctcctccacctgagaagttaactgagacagaagctcaagattttggatacagatatcagtgtcaatcctcgatattggaaataatggcgaatgatgtgttcctgcagaagaaactgttacatgccgagtcacttgtaaaacaagtgactgaatcacaggacaagatacagaatacagtgagaactgaaaaatcaaaaggagaaattctagaggatattttatcagcctggtgtggaagctcagtttggggcaatttgaccgagtcactaagtcatagtgaatatgacaccaatctatatttgcgggcaaaggttgctgccagttcagtcaccgcccttgtcatggtgaaattagcacgtggtgatgctggaagtttgtctgtgtcattacttgagaagtcccacattcttttaaataagctccgaagtcatcctgcgttttctgaattgttagctcaatactcactgcatagttacagtgcagagaaggagcgaaattatttgatactcagcgatctatattatcatctgcaaggggaggtagaaggccgtgaaattggtgctggatcatttaaagaactctctcagttcttaattgaatcaaacatttttcagacttaccaacttaagtatgatggcgatctttttataactggcaaagatgcgtaccggtttgatctcaaacgcgtaagagctgatttgggatcagatctttgggattattcaacttggaaggagtcaaaggcgattgcagaaacaatgttgaatcacatgaaggatgtgaactcaatggtgttccttacaagctcaaaactttctgcacttagagcattaagaagtgtcttaactgtttacctggatgattcactggagtcgaagagtacagcgagagagatctctgatcaactggttttcccatgcatagatcacatatgccagaatttccttgatgcagtaaaatcattggctccagaacttggtgcttctgaagaaatctttcacttccttgcagctcaagcagaattgcttctttatcttatgatttctacacataagagcctgcctccatctgtttgcgttcttgtgctaaaaacatcagctgctggccttaaagtgttgagtgatttccaaccattagttactgggtcatcagtttctgtggttagctctacagtcaagctcttactcatgctgcttctctcagcagtgaagtttagttgtcattattcaaatttagttggggaaagagatacagtatctgttgaaaacatggctaaaatatctaatctgagtctacgtctgctaccaattctctgtaaccgcattgctagtgctgaggattgcagactctcccttactactatggacttgatattgagaaatttcttgactcccaacacttggtttcccatcatacagaatcacctccagcttcagcattttattctgaagcttcaagataaaaagtctcttgaatctgtgcctattataatgaagttctttttgactcttgctcgtgtgaggcagggtgcagagatgcttattaatcatggttttctctcatctctgagattcttgttcgctgagtacttggatgatatgtcttcttcagtaactatgagtaataggctttccaactcatctgacataatggaaaagcctaaacaaatttggggactgggttcggctgtcatcacagctatggttcagtctctaggagacagttctgcttgttctgatgttgtggagaatgtaataccttacttcttttctgagaaagcatatatgatttcgtactatctcagtgcaccggacttcccatctgatgatcatgacaagaaaagacctcgtgctcagcagagacaaacctcgcttactgatcttaaagaaactgagcacactctcatgctaatgtgtgtgctggcaaaacattggaattcatgggttaaggccatgaaagaattggattcccagctgagagagaaaagtatccatcttttagcatttatcagcaggggaactcaacgccttggagaaacttcgagttttagtgcccctctcatatgtcctcctacccttaaagaggaattcgatacttgcaagaaaccctcgtttgtcaacagtagaagtggatggtttgctctttcaccgcctggctgcatgtcaaaaccaaaagtgtcggctgcctctatcacatcaacagcactgactattaaaactcaagctactgcaaatggttatcacgtttctcaatcgtacttctcagacactattgccctacagatctacaaaattacgtttctcctattgaagtttctctgtttacaagctgagtgcgcttctagaaggtcagaggaggtggggtttgttgatcttgaccattttcctgagcttccaatgcctgagatcttacatggcttacaggatcaagcaattgccatcattacagaactatgtgaagctaacagaacgaaggagattcacattgaagtccagtctatctgttgtttgttgctacaaataatggagatggccatgtacttggaactttgtgttctacagatatgtggcataagacccgtgctagggcgtgtggaagatttttcaaaggaagttaaactgttgataaaagcgacggagacgcatgctttcctgaaaccgtctctgaagtccttgaagcagataatgtcggttgtctatcccggattggtacaggcagacgaatttttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

2074

Amino Acids

231.99

Weight (kDa)

5.67

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 4142, 4982
AatII GACGTC 1 cut(s) 336
Acc16I TGCGCA 1 cut(s) 2419
Acc36I ACCTGC 1 cut(s) 143
AccB7I CCANNNNNTGG 2 cut(s) 4469, 4893
AccI GTMKAC 5 cut(s) 336, 459, 1964, 3352, 4786
AccII CGCG 3 cut(s) 166, 243, 4179
AclI AACGTT 1 cut(s) 219
AclWI GGATC 5 cut(s) 119, 149, 4066, 4204, 5925
AcoI YGGCCR 3 cut(s) 108, 324, 6024
AcuI CTGAAG 9 cut(s) 752, 1107, 1523, 2495, 4500, 4910, 4961, 5085, 6179
AcvI CACGTG 1 cut(s) 3851
AcyI GRCGYC 4 cut(s) 26, 333, 339, 1406
AdeI CACNNNGTG 1 cut(s) 3854
AfeI AGCGCT 1 cut(s) 2913
AflII CTTAAG 1 cut(s) 4118
AflIII ACRYGT 1 cut(s) 4177
AgeI ACCGGT 1 cut(s) 4161
AhdI GACNNNNNGTC 1 cut(s) 2735
AjuI GAANNNNNNNTTGG 4 cut(s) 1101, 1133, 3721, 3753
Alw21I GWGCWC 7 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391
Alw44I GTGCAC 2 cut(s) 674, 5298
AlwI GGATC 5 cut(s) 119, 149, 4066, 4204, 5925
AlwNI CAGNNNCTG 3 cut(s) 4595, 4649, 4751
Ama87I CYCGRG 1 cut(s) 383
Aor51HI AGCGCT 1 cut(s) 2913
ApaLI GTGCAC 2 cut(s) 674, 5298
AseI ATTAAT 3 cut(s) 848, 1292, 5037
AsiGI ACCGGT 1 cut(s) 4161
Asp700I GAANNNNTTC 4 cut(s) 2034, 2037, 4488, 4518
AspLEI GCGC 6 cut(s) 6, 243, 1998, 2420, 2914, 5831
AspS9I GGNCC 7 cut(s) 355, 1174, 1286, 1627, 1649, 1855, 2002
AsuC2I CCSGG 2 cut(s) 1975, 6195
AsuII TTCGAA 1 cut(s) 302
AvaI CYCGRG 1 cut(s) 383
AvaII GGWCC 5 cut(s) 355, 1174, 1627, 1649, 1855
BaeGI GKGCMC 3 cut(s) 678, 5302, 5548
BaeI ACNNNNGTAYC 2 cut(s) 3397, 3430
BalI TGGCCA 3 cut(s) 110, 326, 6026
BanII GRGCYC 3 cut(s) 38, 2117, 3385
BauI CACGAG 3 cut(s) 677, 5007, 5340
BbrPI CACGTG 1 cut(s) 3851
BbsI GAAGAC 5 cut(s) 460, 948, 1047, 1655, 5088
Bbv12I GWGCWC 7 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391
BbvCI CCTCAGC 4 cut(s) 924, 2286, 2881, 4827
BceAI ACGGC 3 cut(s) 158, 2727, 4026
BciVI GTATCC 3 cut(s) 1625, 3533, 5492
BclI TGATCA 3 cut(s) 1372, 4393, 5320
BcnI CCSGG 2 cut(s) 1975, 6195
BfmI CTRYAG 8 cut(s) 116, 2450, 2901, 3126, 3596, 4662, 5771, 6050
BfoI RGCGCY 1 cut(s) 2915
BfrI CTTAAG 1 cut(s) 4118
BfuAI ACCTGC 1 cut(s) 143
BfuI GTATCC 3 cut(s) 1625, 3533, 5492
BglI GCCNNNNNGGC 1 cut(s) 1195
BglII AGATCT 7 cut(s) 3058, 3112, 3320, 4201, 4386, 5775, 5898
BlpI GCTNAGC 1 cut(s) 5346
BmcAI AGTACT 2 cut(s) 2537, 5081
Bme18I GGWCC 5 cut(s) 355, 1174, 1627, 1649, 1855
BmeRI GACNNNNNGTC 1 cut(s) 2735
BmeT110I CYCGRG 1 cut(s) 383
BmgT120I GGNCC 7 cut(s) 355, 1174, 1286, 1627, 1649, 1855, 2002
BmiI GGNNCC 4 cut(s) 356, 357, 1628, 4461
BmrI ACTGGG 4 cut(s) 480, 1893, 4644, 5180
BmuI ACTGGG 4 cut(s) 480, 1893, 4644, 5180
BpiI GAAGAC 5 cut(s) 460, 948, 1047, 1655, 5088
BplI GAGNNNNNCTC 2 cut(s) 4540, 4572
BpmI CTGGAG 4 cut(s) 804, 4382, 4446, 4904
Bpu10I CCTNAGC 6 cut(s) 924, 2057, 2286, 2881, 4827, 5880
Bpu1102I GCTNAGC 1 cut(s) 5346
Bpu14I TTCGAA 1 cut(s) 302
BpuEI CTTGAG 6 cut(s) 626, 3110, 3513, 3905, 4491, 5697
BpuMI CCSGG 2 cut(s) 1975, 6195
BsaAI YACGTR 1 cut(s) 3851
BsaBI GATNNNNATC 1 cut(s) 4131
BsaHI GRCGYC 4 cut(s) 26, 333, 339, 1406
BsaI GGTCTC 1 cut(s) 642
BsaJI CCNNGG 5 cut(s) 1630, 1873, 1974, 2232, 5521
BsaWI WCCGGW 3 cut(s) 1656, 4161, 5302
BsaXI ACNNNNNCTCC 2 cut(s) 5840, 5870
Bse118I RCCGGY 2 cut(s) 28, 4161
Bse3DI GCAATG 1 cut(s) 4815
Bse8I GATNNNNATC 1 cut(s) 4131
BseDI CCNNGG 5 cut(s) 1630, 1873, 1974, 2232, 5521
BseJI GATNNNNATC 1 cut(s) 4131
BseMI GCAATG 1 cut(s) 4815
BseRI GAGGAG 7 cut(s) 299, 384, 941, 1616, 2869, 3486, 5861
BseSI GKGCMC 3 cut(s) 678, 5302, 5548
BseYI CCCAGC 1 cut(s) 5463
BsgI GTGCAG 4 cut(s) 3135, 3993, 4296, 5043
Bsh1236I CGCG 3 cut(s) 166, 243, 4179
BshTI ACCGGT 1 cut(s) 4161
BsiHKAI GWGCWC 7 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391
BsiHKCI CYCGRG 1 cut(s) 383
BsiSI CCGG 6 cut(s) 29, 1657, 1974, 4162, 5303, 6195
BslFI GGGAC 5 cut(s) 368, 1640, 1856, 3877, 5181
BsmBI CGTCTC 3 cut(s) 1844, 6125, 6159
BsmFI GGGAC 5 cut(s) 368, 1640, 1856, 3877, 5181
BsmI GAATGC 2 cut(s) 1397, 3428
Bso31I GGTCTC 1 cut(s) 642
BsoBI CYCGRG 1 cut(s) 383
Bsp119I TTCGAA 1 cut(s) 302
Bsp1286I GDGCHC 8 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391, 5548
Bsp1407I TGTACA 2 cut(s) 1761, 2705
Bsp1720I GCTNAGC 1 cut(s) 5346
Bsp68I TCGCGA 1 cut(s) 166
BspFNI CGCG 3 cut(s) 166, 243, 4179
BspHI TCATGA 1 cut(s) 5323
BspLI GGNNCC 4 cut(s) 356, 357, 1628, 4461
BspMAI CTGCAG 3 cut(s) 120, 2454, 3600
BspMI ACCTGC 1 cut(s) 143
BspPI GGATC 5 cut(s) 119, 149, 4066, 4204, 5925
BspT104I TTCGAA 1 cut(s) 302
BspTI CTTAAG 1 cut(s) 4118
BspTNI GGTCTC 1 cut(s) 642
BsrDI GCAATG 1 cut(s) 4815
BsrFI RCCGGY 2 cut(s) 28, 4161
BsrGI TGTACA 2 cut(s) 1761, 2705
BssAI RCCGGY 2 cut(s) 28, 4161
BssECI CCNNGG 5 cut(s) 1630, 1873, 1974, 2232, 5521
BssNAI GTATAC 2 cut(s) 1965, 3353
BssNI GRCGYC 4 cut(s) 26, 333, 339, 1406
BssSI CACGAG 3 cut(s) 677, 5007, 5340
BssT1I CCWWGG 1 cut(s) 5521
Bst1107I GTATAC 2 cut(s) 1965, 3353
Bst2BI CACGAG 3 cut(s) 677, 5007, 5340
Bst6I CTCTTC 3 cut(s) 479, 2514, 4364
BstACI GRCGYC 4 cut(s) 26, 333, 339, 1406
BstAFI CTTAAG 1 cut(s) 4118
BstAPI GCANNNNNTGC 1 cut(s) 3806
BstAUI TGTACA 2 cut(s) 1761, 2705
BstBAI YACGTR 1 cut(s) 3851
BstBI TTCGAA 1 cut(s) 302
BstDSI CCRYGG 1 cut(s) 2232
BstEII GGTNACC 1 cut(s) 2068
BstENI CCTNNNNNAGG 2 cut(s) 1733, 5573
BstFNI CGCG 3 cut(s) 166, 243, 4179
BstH2I RGCGCY 1 cut(s) 2915
BstHHI GCGC 6 cut(s) 6, 243, 1998, 2420, 2914, 5831
BstNSI RCATGY 5 cut(s) 1871, 2161, 3617, 5656, 6140
BstPI GGTNACC 1 cut(s) 2068
BstSFI CTRYAG 8 cut(s) 116, 2450, 2901, 3126, 3596, 4662, 5771, 6050
BstSLI GKGCMC 3 cut(s) 678, 5302, 5548
BstUI CGCG 3 cut(s) 166, 243, 4179
BstV2I GAAGAC 5 cut(s) 460, 948, 1047, 1655, 5088
BstX2I RGATCY 9 cut(s) 124, 154, 3058, 3112, 3320, 4201, 4386, 5775, 5898
BstXI CCANNNNNNTGG 2 cut(s) 2135, 6034
BstYI RGATCY 9 cut(s) 124, 154, 3058, 3112, 3320, 4201, 4386, 5775, 5898
BstZ17I GTATAC 2 cut(s) 1965, 3353
BsuI GTATCC 3 cut(s) 1625, 3533, 5492
BtgI CCRYGG 1 cut(s) 2232
BtsI GCAGTG 2 cut(s) 3956, 4704
BtuMI TCGCGA 1 cut(s) 166
BveI ACCTGC 1 cut(s) 143
CaiI CAGNNNCTG 3 cut(s) 4595, 4649, 4751
CciI TCATGA 1 cut(s) 5323
CfoI GCGC 6 cut(s) 6, 243, 1998, 2420, 2914, 5831
Cfr10I RCCGGY 2 cut(s) 28, 4161
Cfr13I GGNCC 7 cut(s) 355, 1174, 1286, 1627, 1649, 1855, 2002
CseI GACGC 5 cut(s) 34, 347, 1395, 3404, 6142
CsiI ACCWGGT 1 cut(s) 174
CspAI ACCGGT 1 cut(s) 4161
CspCI CAANNNNNGTGG 2 cut(s) 3273, 3308
DraI TTTAAA 3 cut(s) 1260, 3906, 4066
DraIII CACNNNGTG 1 cut(s) 3854
DriI GACNNNNNGTC 1 cut(s) 2735
EaeI YGGCCR 3 cut(s) 108, 324, 6024
Eam1104I CTCTTC 3 cut(s) 479, 2514, 4364
Eam1105I GACNNNNNGTC 1 cut(s) 2735
EarI CTCTTC 3 cut(s) 479, 2514, 4364
Ecl136II GAGCTC 3 cut(s) 36, 2115, 3383
Eco130I CCWWGG 1 cut(s) 5521
Eco24I GRGCYC 3 cut(s) 38, 2117, 3385
Eco31I GGTCTC 1 cut(s) 642
Eco32I GATATC 3 cut(s) 550, 1228, 3548
Eco47I GGWCC 5 cut(s) 355, 1174, 1627, 1649, 1855
Eco47III AGCGCT 1 cut(s) 2913
Eco53kI GAGCTC 3 cut(s) 36, 2115, 3383
Eco57I CTGAAG 9 cut(s) 752, 1107, 1523, 2495, 4500, 4910, 4961, 5085, 6179
Eco72I CACGTG 1 cut(s) 3851
Eco88I CYCGRG 1 cut(s) 383
Eco91I GGTNACC 1 cut(s) 2068
EcoICRI GAGCTC 3 cut(s) 36, 2115, 3383
EcoNI CCTNNNNNAGG 2 cut(s) 1733, 5573
EcoO109I RGGNCCY 1 cut(s) 355
EcoO65I GGTNACC 1 cut(s) 2068
EcoRI GAATTC 2 cut(s) 5428, 5579
EcoRV GATATC 3 cut(s) 550, 1228, 3548
EcoT14I CCWWGG 1 cut(s) 5521
EcoT22I ATGCAT 2 cut(s) 1267, 4415
EcoT38I GRGCYC 3 cut(s) 38, 2117, 3385
ErhI CCWWGG 1 cut(s) 5521
Esp3I CGTCTC 3 cut(s) 1844, 6125, 6159
FalI AAGNNNNNCTT 8 cut(s) 1107, 1139, 1542, 1574, 2022, 2054, 2025, 2057
FaqI GGGAC 5 cut(s) 368, 1640, 1856, 3877, 5181
FauI CCCGC 1 cut(s) 3789
FauNDI CATATG 2 cut(s) 4424, 5555
FbaI TGATCA 3 cut(s) 1372, 4393, 5320
FblI GTMKAC 5 cut(s) 336, 459, 1964, 3352, 4786
FriOI GRGCYC 3 cut(s) 38, 2117, 3385
FspI TGCGCA 1 cut(s) 2419
GlaI GCGC 6 cut(s) 5, 242, 1997, 2419, 2913, 5830
GsaI CCCAGC 1 cut(s) 5467
GsuI CTGGAG 4 cut(s) 804, 4382, 4446, 4904
HaeII RGCGCY 1 cut(s) 2915
HapII CCGG 6 cut(s) 29, 1657, 1974, 4162, 5303, 6195
HgaI GACGC 5 cut(s) 34, 347, 1395, 3404, 6142
HhaI GCGC 6 cut(s) 6, 243, 1998, 2420, 2914, 5831
Hin1I GRCGYC 4 cut(s) 26, 333, 339, 1406
Hin6I GCGC 6 cut(s) 4, 241, 1996, 2418, 2912, 5829
HinP1I GCGC 6 cut(s) 4, 241, 1996, 2418, 2912, 5829
HincII GTYRAC 6 cut(s) 337, 460, 904, 2527, 3513, 5611
HindII GTYRAC 6 cut(s) 337, 460, 904, 2527, 3513, 5611
HindIII AAGCTT 1 cut(s) 4943
HpaI GTTAAC 2 cut(s) 2527, 3513
HpaII CCGG 6 cut(s) 29, 1657, 1974, 4162, 5303, 6195
Hpy99I CGWCG 7 cut(s) 28, 335, 338, 341, 407, 461, 6130
Hsp92I GRCGYC 4 cut(s) 26, 333, 339, 1406
HspAI GCGC 6 cut(s) 4, 241, 1996, 2418, 2912, 5829
KflI GGGWCCC 1 cut(s) 355
KroI GCCGGC 1 cut(s) 28
KroNI GCCGGC 1 cut(s) 30
Ksp22I TGATCA 3 cut(s) 1372, 4393, 5320
KspAI GTTAAC 2 cut(s) 2527, 3513
MabI ACCWGGT 1 cut(s) 174
MfeI CAATTG 1 cut(s) 5925
MflI RGATCY 9 cut(s) 124, 154, 3058, 3112, 3320, 4201, 4386, 5775, 5898
MhlI GDGCHC 8 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391, 5548
MlsI TGGCCA 3 cut(s) 110, 326, 6026
MluI ACGCGT 1 cut(s) 4177
MluNI TGGCCA 3 cut(s) 110, 326, 6026
MmeI TCCRAC 6 cut(s) 152, 426, 3031, 3235, 4645, 5151
Mox20I TGGCCA 3 cut(s) 110, 326, 6026
Mph1103I ATGCAT 2 cut(s) 1267, 4415
MreI CGCCGGCG 1 cut(s) 28
MroNI GCCGGC 1 cut(s) 28
MroXI GAANNNNTTC 4 cut(s) 2034, 2037, 4488, 4518
MscI TGGCCA 3 cut(s) 110, 326, 6026
MslI CAYNNNNRTG 7 cut(s) 681, 1361, 1559, 2162, 5192, 5396, 5402
Msp20I TGGCCA 3 cut(s) 110, 326, 6026
MspA1I CMGCKG 5 cut(s) 55, 544, 2779, 4592, 5467
MspCI CTTAAG 1 cut(s) 4118
MspI CCGG 6 cut(s) 29, 1657, 1974, 4162, 5303, 6195
MunI CAATTG 1 cut(s) 5925
Mva1269I GAATGC 2 cut(s) 1397, 3428
MvnI CGCG 3 cut(s) 166, 243, 4179
NaeI GCCGGC 1 cut(s) 30
NciI CCSGG 2 cut(s) 1975, 6195
NdeI CATATG 2 cut(s) 4424, 5555
NgoMIV GCCGGC 1 cut(s) 28
NlaIV GGNNCC 4 cut(s) 356, 357, 1628, 4461
NmeAIII GCCGAG 1 cut(s) 3643
NmuCI GTSAC 8 cut(s) 43, 984, 1605, 2411, 3621, 3637, 3756, 3820
NruI TCGCGA 1 cut(s) 166
NsbI TGCGCA 1 cut(s) 2419
NsiI ATGCAT 2 cut(s) 1267, 4415
NspI RCATGY 5 cut(s) 1871, 2161, 3617, 5656, 6140
NspV TTCGAA 1 cut(s) 302
PaeI GCATGC 1 cut(s) 6140
PaeR7I CTCGAG 1 cut(s) 383
PagI TCATGA 1 cut(s) 5323
PcsI WCGNNNNNNNCGW 4 cut(s) 453, 1859, 2325, 2944
PctI GAATGC 2 cut(s) 1397, 3428
PdiI GCCGGC 1 cut(s) 30
PdmI GAANNNNTTC 4 cut(s) 2034, 2037, 4488, 4518
PflFI GACNNNGTC 2 cut(s) 464, 3754
PflMI CCANNNNNTGG 2 cut(s) 4469, 4893
PfoI TCCNGGA 1 cut(s) 6193
PinAI ACCGGT 1 cut(s) 4161
PmaCI CACGTG 1 cut(s) 3851
PmlI CACGTG 1 cut(s) 3851
Ppu21I YACGTR 1 cut(s) 3851
PpuMI RGGWCCY 1 cut(s) 355
PshBI ATTAAT 3 cut(s) 848, 1292, 5037
PsiI TTATAA 2 cut(s) 4142, 4982
Psp124BI GAGCTC 3 cut(s) 38, 2117, 3385
Psp1406I AACGTT 1 cut(s) 219
Psp5II RGGWCCY 1 cut(s) 355
PspCI CACGTG 1 cut(s) 3851
PspEI GGTNACC 1 cut(s) 2068
PspFI CCCAGC 1 cut(s) 5463
PspN4I GGNNCC 4 cut(s) 356, 357, 1628, 4461
PspPI GGNCC 7 cut(s) 355, 1174, 1286, 1627, 1649, 1855, 2002
PspPPI RGGWCCY 1 cut(s) 355
PstI CTGCAG 3 cut(s) 120, 2454, 3600
PstNI CAGNNNCTG 3 cut(s) 4595, 4649, 4751
PsuI RGATCY 9 cut(s) 124, 154, 3058, 3112, 3320, 4201, 4386, 5775, 5898
PsyI GACNNNGTC 2 cut(s) 464, 3754
PvuII CAGCTG 4 cut(s) 544, 2779, 4592, 5467
RruI TCGCGA 1 cut(s) 166
RseI CAYNNNNRTG 7 cut(s) 681, 1361, 1559, 2162, 5192, 5396, 5402
SacI GAGCTC 3 cut(s) 38, 2117, 3385
SalI GTCGAC 2 cut(s) 335, 458
Sau96I GGNCC 7 cut(s) 355, 1174, 1286, 1627, 1649, 1855, 2002
ScaI AGTACT 2 cut(s) 2537, 5081
SduI GDGCHC 8 cut(s) 38, 678, 2117, 3385, 5302, 5347, 5391, 5548
SexAI ACCWGGT 1 cut(s) 174
SfcI CTRYAG 8 cut(s) 116, 2450, 2901, 3126, 3596, 4662, 5771, 6050
Sfr274I CTCGAG 1 cut(s) 383
SfuI TTCGAA 1 cut(s) 302
SgrAI CRCCGGYG 1 cut(s) 28
SgrDI CGTCGACG 1 cut(s) 335
SinI GGWCC 5 cut(s) 355, 1174, 1627, 1649, 1855
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 7 cut(s) 681, 1361, 1559, 2162, 5192, 5396, 5402
SmlI CTYRAG 8 cut(s) 383, 641, 3089, 3528, 3884, 4118, 4506, 5712
SmoI CTYRAG 8 cut(s) 383, 641, 3089, 3528, 3884, 4118, 4506, 5712
SphI GCATGC 1 cut(s) 6140
SstI GAGCTC 3 cut(s) 38, 2117, 3385
StyI CCWWGG 1 cut(s) 5521
TaqII GACCGA 2 cut(s) 1644, 3767
TatI WGTACW 8 cut(s) 992, 1761, 2485, 2535, 2705, 4373, 5079, 6030
TauI GCSGC 5 cut(s) 81, 84, 105, 484, 506
TseFI GTSAC 8 cut(s) 43, 984, 1605, 2411, 3621, 3637, 3756, 3820
Tsp45I GTSAC 8 cut(s) 43, 984, 1605, 2411, 3621, 3637, 3756, 3820
TspGWI ACGGA 3 cut(s) 1868, 2221, 6143
Tth111I GACNNNGTC 2 cut(s) 464, 3754
Van91I CCANNNNNTGG 2 cut(s) 4469, 4893
Vha464I CTTAAG 1 cut(s) 4118
VneI GTGCAC 2 cut(s) 674, 5298
VpaK11BI GGWCC 5 cut(s) 355, 1174, 1627, 1649, 1855
VspI ATTAAT 3 cut(s) 848, 1292, 5037
XagI CCTNNNNNAGG 2 cut(s) 1733, 5573
XbaI TCTAGA 4 cut(s) 769, 2797, 3700, 5834
XceI RCATGY 5 cut(s) 1871, 2161, 3617, 5656, 6140
XcmI CCANNNNNNNNNTGG 2 cut(s) 218, 5452
XhoI CTCGAG 1 cut(s) 383
XmiI GTMKAC 5 cut(s) 336, 459, 1964, 3352, 4786
XmnI GAANNNNTTC 4 cut(s) 2034, 2037, 4488, 4518
ZraI GACGTC 1 cut(s) 334
ZrmI AGTACT 2 cut(s) 2537, 5081
Zsp2I ATGCAT 2 cut(s) 1267, 4415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.