Rw6G002300

glomerular visceral epithelial cell migration

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
3856544 .. 3874610
18067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G002300.1

Sequence Viewer

Length: 5886 bp
ATGGCCACCGACGTCGACGCCTCTCTCTGGTGGGACCCCTTCTCTCTCTTACTCACCGACCTCGAGAACGCTCCTCTCTCCGACGACCTCCCTCCCAATCTGGTCAAGAAATTGAAGGCCAATCACGCCTGGTTCGTCGACACAGTCTTCCTCTTCAAGCCGCCCAGTGAGAAATCAAAGGCGGCTTTGGATTCACAGCTTGTCAAAATCGGGTCTCACCAGCTGGATATCAAGCCTGAATTGAAAGATAAGGCTCTGACTATCAGCTCCTATTTGTGTCTGGATGAGGTGCAATCTTACATTCTTGTCGAAAGGTCTCTCAAGGACAACAATGTAGCTCTTGACTTTGTGCTGCACGAGTATGTTCATGCGGTGTTAATTCACTATTATATTGAGCGACAGTGCTTGCTGAAGTGTACCAGGAGTATTCTCATGCTTGCTTTGTCTCTAGAAACTCTCTCTGGAGAAGGAACTGCTATTAAGGAGGAAGCACTGAAGTTGATTTCTGATGGATTGGAGAAGAAATTAATATCTGTGCTGCAAGACCTTTTATCTTCCAATCCCCCTGAACAAATGGATGTTGACCTTTTCAGCTTGTGGGCTGAGGAGACACTAATCGAAGACAATTTGGTTTTGGATATTCTTTTCCTGGCTTATTATGAGTCACTTTGTACTTGTAATGGTGAAACGTGGAAAGGATTGTGCTTGCTCTATAAGGGAATTTTATCTGGGTCTTCTAACTTTGAAAAGCTGGCAATATCAACTGAAGCACTACGTTCTTCTTACCAAGCCAAAGTTCAGCTTCTTCTAATTCTTATAGAAACCCTAGACCTGGAAAGTTGTCTCCAAATGGTCCATGATGAAATGCCTTTCAGGCACGGTGCATCTGCTATTACTTTGGCTGATATCCAAGAGATTGAAGCAATAATTTCAACTTTAAATGCATTTGAAACAAAAGAGGCAGGCCCATTAATTCTGGCATGGGCAGTCTTTCTTTGTCTGATTTCATCACTTCCAGGCAAAGAAGAAAACAACATACTAATGGAAATTGATCATGTTGGTTATGTTCGCCAAGCATTCGAGGCGTCATCTTTGACTTATTTTGTAGAAATCCTTGAAAGTGATGTATTGAAGGAATCTGATGGGTCTGTTACTGGTTATCGAAGTGTGTTGAGAACTATTATTTCTGCATTTATCGCATCTTATGAGATCAATCTTCAGATGGAAGAAGGCACTCTTATGTTAATACTGGATATTCTTTGCAAAATTTATCAGGGAGAGGAGTCACTTTGTATCCAGTTCTGGGACCGAGGAAGTTTTATTGATGGTCCTATCCGGTGTCTTCTTTACAACTTAGAGAGTGAATTTCCTTTCAGGACTGTGGAGCTTGTTCGCCTTTTATCATCCCTTTGTGAGGGAACGTGGCCTGCTGAATGTGTGTACAACTTTTTAGATAAGTCTGTTGGTGTATCATCCTTGTTTAAGATTGCGAACAATTCCTTTAGGGATGGCATCTCTCAAACTGTTGAGACGGACCTCCCGTTGCATGTCCCTGGACTTGAAGGTTTGGTCATCCCCAGTAAAACTTGTGGGCATATATTAAGATTAGTTGGTGAAAATACTGCTCTTGTTCGATGGGAGTATACACAATCCGGGGTGCTAGTGTTGCTTATGCGCTTGGCCCAAGAGCTGTATTTCAAAAGAAATGAAGAAGTTCTTCTTATCCTCAACCTCCTTAGCCGGATGGTTACCTTTAGCATGGCTGTATGCTTTGCTTTGATGGATATTGGGGGCTCTTTGCATTTCCAATCAACTGGCATGAGTGGGCAGAATAGCATGTGGGTGGTTGAGATGATTAGCACTTTAGTCAGAAGGTTATCTCCTACTCCTAGCGGTGCTGCTCTAATGTCCGTGGCTATCAACATTTTGGCAAAGATGTTAAAATGTTCCCCTTCTCATGTTGCTGAGGTAGCCTTAAAAGCAAATATGTTTGATTTCGAGATTGGCGACAATGGTTCATCAAGTGAATCATGGTTACTTTCTGGAAAACTGGCGAAGATGCTTGTAATTGATTGTGAGCATAATGATAGTGACTGCGCATTGACTATATCAGTGCTGGACTTTACTCTGCAGTTCATGGAATCAGGTGTGAAGAATGATGCTGTACTGGCTTTAATCGTTTTCTCTCTTCAGTATGTTCTCGTTAACCATGAGTACTGGAAATACAAGTTAAAGCATACTCGATGGAGAGTAACATTAAAGGTGCTTGAAGTGTTGAAAAGGTGTATTACATCAACTTCATGCTCTGAAAAGCTGGATGAAGTCATCCTAGATAGGATATTCTGTGATTCTTCCATCCATAATACTCTCTTTCAAATTGTTTGTACAACACCACAAATGTTAGAGAGACTATGTTTCAGCCGTCTTATTGAGCTAACAGAGATTGAAGGTTTACAGCTGGCTATATGTTCTGTTCTAGATGTTCTTTTCATCATGCTCTCCAAATTTTCTAAGGGTACATTTTCCAGCCTTCCAATTTTTCACCAAGCAGTTTTCTCCTCAGCAACAAAACCAATTCCTGTAGTTGCAGCGCTCGTATCGTTCATATCTTATTCTCGCAATCCACGAATACAAGTTGGTGCTGCTAGGGTTTTGTCAGTGTTCTTGATGATGGCAGATATTATCCAACCATATTTGTTTGGAAGCAGCTTTGGCCTAGATGACATACAGATTGAAGATCTGAGGCATGGTATTAGTTACATATTACTTGAGCAGTCAGTATCGAATGAAGATCTCTTTGTTGCTGTAGTCAATCTGCTCACTTCTGCTGCACGTTATCAGCCTGCTTTTCTTGTTGCTGTGTTATCCACCAAATTCAATGAAGGTGTCCAACTGAGTAATGCTGGTGATATGAATCTGCCAACAAATGAAGTTCTGTTGAGGTCATCTGAGTCTGAAAAGGCAAGTGTTGTGGATGCAGTTCTGCATTATGTTAGAAGATCTAATGATCTTATCAACAGCAATCCCCGTATACTGCTGAATGTTCTGAACTTTCTAAGAGCTCTGTGGCAAGACGCTGCTCGGTACTCTGGTATTTTGGAATGCGTGAAAGGCTCTGAAAATTTCTGGAAAAACTTGTCGAGTTCTATTTCCAAAATTTCTAGTGTGGAAGCTCCTCCACCTGAGAAGTTAACTGAGACAGAAGCTCAAGATTTTGGATACAGATATCAGTGTCAATCCTCGATATTGGAAATAATGGCGAATGATGTGTTCCTGCAGAAGAAACTGTTACATGCCGAGTCACTTGTAAAACAAGTGACTGAATCACAGGACAAGATACAGAATACAGTGAGAACTGAAAAATCAAAAGGAGAAATTCTAGAGGATATTTTATCAGCCTGGTGTGGAAGCTCAGTTTGGGGCAATTTGACCGAGTCACTAAGTCATAGTGAATATGACACCAATCTATATTTGCGGGCAAAGGTTGCTGCCAGTTCAGTCACCGCCCTTGTCATGGTGAAATTAGCACGTGGTGATGCTGGAAGTTTGTCTGTGTCATTACTTGAGAAGTCCCACATTCTTTTAAATAAGCTCCGAAGTCATCCTGCGTTTTCTGAATTGTTAGCTCAATACTCACTGCATAGTTACAGTGCAGAGAAGGAGCGAAATTATTTGATACTCAGCGATCTATATTATCATCTGCAAGGGGAGGTAGAAGGCCGTGAAATTGGTGCTGGATCATTTAAAGAACTCTCTCAGTTCTTAATTGAATCAAACATTTTTCAGACTTACCAACTTAAGTATGATGGCGATCTTTTTATAACTGGCAAAGATGCGTACCGGTTTGATCTCAAACGCGTAAGAGCTGATTTGGGATCAGATCTTTGGGATTATTCAACTTGGAAGGAGTCAAAGGCGATTGCAGAAACAATGTTGAATCACATGAAGGATGTGAACTCAATGGTGTTCCTTACAAGCTCAAAACTTTCTGCACTTAGAGCATTAAGAAGTGTCTTAACTGTTTACCTGGATGATTCACTGGAGTCGAAGAGTACAGCGAGAGAGATCTCTGATCAACTGGTTTTCCCATGCATAGATCACATATGCCAGAATTTCCTTGATGCAGTAAAATCATTGGCTCCAGAACTTGGTGCTTCTGAAGAAATCTTTCACTTCCTTGCAGCTCAAGCAGAATTGCTTCTTTATCTTATGATTTCTACACATAAGAGCCTGCCTCCATCTGTTTGCGTTCTTGTGCTAAAAACATCAGCTGCTGGCCTTAAAGTGTTGAGTGATTTCCAACCATTAGTTACTGGGTCATCAGTTTCTGTGGTTAGCTCTACAGTCAAGCTCTTACTCATGCTGCTTCTCTCAGCTTATTCAAATTTAGTTGGGGAAAGAGATACAGTATCTGTTGAAAACATGGCTAAAATATCTAATCTGAGTCTACGTCTGCTACCAATTCTCTGTAACCGCATTGCTAGTGCTGAGGATTGCAGACTCTCCCTTACTACTATGGACTTGATATTGAGAAATTTCTTGACTCCCAACACTTGGTTTCCCATCATACAGAATCACCTCCAGCTTCAGCATTTTATTCTGAAGCTTCAAGATAAAAAGTCTCTTGAATCTGTGCCTATTATAATGAAGTTCTTTTTGACTCTTGCTCGTGTGAGGCAGGGTGCAGAGATGCTTATTAATCATGGTTTTCTCTCATCTCTGAGATTCTTGTTCGCTGAGTACTTGGATGATATGTCTTCTTCAGTAACTATGAGTAATAGGCTTTCCAACTCATCTGACATAATGGAAAAGCCTAAACAAATTTGGGGACTGGGTTCGGCTGTCATCACAGCTATGGTTCAGTCTCTAGGAGACAGTTCTGCTTGTTCTGATGTTGTGGAGAATGTAATACCTTACTTCTTTTCTGAGAAAGCATATATGATTTCGTACTATCTCAGTGCACCGGACTTCCCATCTGATGATCATGACAAGAAAAGACCTCGTGCTCAGCAGAGACAAACCTCGCTTACTGATCTTAAAGAAACTGAGCACACTCTCATGCTAATGTGTGTGCTGGCAAAACATTGGAATTCATGGGTTAAGGCCATGAAAGAATTGGATTCCCAGCTGAGAGAGAAAAGTATCCATCTTTTAGCATTTATCAGCAGGGGAACTCAACGCCTTGGAGAAACTTCGAGTTTTAGTGCCCCTCTCATATGTCCTCCTACCCTTAAAGAGGAATTCGATACTTGCAAGAAACCCTCGTTTGTCAACAGTAGAAGTGGATGGTTTGCTCTTTCACCGCCTGGCTGCATGTCAAAACCAAAAGTGTCGGCTGCCTCTATCACATCAACAGCACTGACTATTAAAACTCAAGCTACTGCAAATGGTTATCACGTTTCTCAATCGTACTTCTCAGACACTATTGCCCTACAGATCTACAAAATTACGTTTCTCCTATTGAAGTTTCTCTGTTTACAAGCTGAGTGCGCTTCTAGAAGGTCAGAGGAGGTGGGGTTTGTTGATCTTGACCATTTTCCTGAGCTTCCAATGCCTGAGATCTTACATGGCTTACAGGATCAAGCAATTGCCATCATTACAGAACTATGTGAAGCTAACAGAACGAAGGAGATTCACATTGAAGTCCAGTCTATCTGTTGTTTGTTGCTACAAATAATGGAGATGGCCATGTACTTGGAACTTTGTGTTCTACAGATATGTGGCATAAGACCCGTGCTAGGGCGTGTGGAAGATTTTTCAAAGGAAGTTAAACTGTTGATAAAAGCGACGGAGACGCATGCTTTCCTGAAACCGTCTCTGAAGTCCTTGAAGCAGATAATGTCGGTTGTCTATCCCGGATTGGTACAGGCAGACGAATTTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1961

Amino Acids

219.45

Weight (kDa)

5.33

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3821, 4643
AatII GACGTC 1 cut(s) 15
Acc16I TGCGCA 1 cut(s) 2098
AccB7I CCANNNNNTGG 2 cut(s) 4148, 4554
AccI GTMKAC 5 cut(s) 15, 138, 1643, 3031, 4447
AccII CGCG 1 cut(s) 3858
AciI CCGC 8 cut(s) 161, 182, 371, 1893, 3475, 3504, 4474, 5303
AclWI GGATC 3 cut(s) 3745, 3883, 5586
AcoI YGGCCR 2 cut(s) 3, 5685
AcvI CACGTG 1 cut(s) 3530
AcyI GRCGYC 3 cut(s) 12, 18, 1085
AdeI CACNNNGTG 1 cut(s) 3533
AfeI AGCGCT 1 cut(s) 2592
AflII CTTAAG 1 cut(s) 3797
AflIII ACRYGT 1 cut(s) 3856
AgeI ACCGGT 1 cut(s) 3840
AjnI CCWGG 9 cut(s) 128, 419, 648, 831, 1015, 1552, 3398, 4026, 5305
AjuI GAANNNNNNNTTGG 4 cut(s) 780, 812, 3400, 3432
Alw21I GWGCWC 4 cut(s) 3064, 4963, 5008, 5052
Alw44I GTGCAC 1 cut(s) 4959
AlwI GGATC 3 cut(s) 3745, 3883, 5586
AlwNI CAGNNNCTG 3 cut(s) 4274, 4328, 4412
Ama87I CYCGRG 1 cut(s) 62
Aor51HI AGCGCT 1 cut(s) 2592
ApaLI GTGCAC 1 cut(s) 4959
AseI ATTAAT 3 cut(s) 527, 971, 4698
AsiGI ACCGGT 1 cut(s) 3840
Asp700I GAANNNNTTC 4 cut(s) 1713, 1716, 4167, 4197
AspLEI GCGC 4 cut(s) 1677, 2099, 2593, 5492
AspS9I GGNCC 7 cut(s) 34, 853, 965, 1306, 1328, 1534, 1681
AsuC2I CCSGG 2 cut(s) 1654, 5856
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 5 cut(s) 34, 853, 1306, 1328, 1534
BaeGI GKGCMC 2 cut(s) 4963, 5209
BaeI ACNNNNGTAYC 2 cut(s) 3076, 3109
BalI TGGCCA 2 cut(s) 5, 5687
BanII GRGCYC 2 cut(s) 1796, 3064
BauI CACGAG 3 cut(s) 356, 4668, 5001
BbrPI CACGTG 1 cut(s) 3530
BbsI GAAGAC 5 cut(s) 139, 627, 726, 1334, 4749
Bbv12I GWGCWC 4 cut(s) 3064, 4963, 5008, 5052
BbvCI CCTCAGC 4 cut(s) 603, 1965, 2560, 4488
BceAI ACGGC 2 cut(s) 2406, 3705
BciT130I CCWGG 9 cut(s) 130, 421, 650, 833, 1017, 1554, 3400, 4028, 5307
BciVI GTATCC 3 cut(s) 1304, 3212, 5153
BclI TGATCA 3 cut(s) 1051, 4072, 4981
BcnI CCSGG 2 cut(s) 1654, 5856
BfmI CTRYAG 7 cut(s) 2129, 2580, 2805, 3275, 4341, 5432, 5711
BfoI RGCGCY 1 cut(s) 2594
BfrI CTTAAG 1 cut(s) 3797
BfuI GTATCC 3 cut(s) 1304, 3212, 5153
BglI GCCNNNNNGGC 1 cut(s) 874
BglII AGATCT 7 cut(s) 2737, 2791, 2999, 3880, 4065, 5436, 5559
BlpI GCTNAGC 1 cut(s) 5007
BmcAI AGTACT 2 cut(s) 2216, 4742
Bme18I GGWCC 5 cut(s) 34, 853, 1306, 1328, 1534
BmeT110I CYCGRG 1 cut(s) 62
BmgT120I GGNCC 7 cut(s) 34, 853, 965, 1306, 1328, 1534, 1681
BmiI GGNNCC 4 cut(s) 35, 36, 1307, 4140
BmrI ACTGGG 4 cut(s) 159, 1572, 4323, 4841
BmuI ACTGGG 4 cut(s) 159, 1572, 4323, 4841
BpiI GAAGAC 5 cut(s) 139, 627, 726, 1334, 4749
BplI GAGNNNNNCTC 2 cut(s) 4219, 4251
BpmI CTGGAG 4 cut(s) 483, 4061, 4125, 4565
Bpu10I CCTNAGC 6 cut(s) 603, 1736, 1965, 2560, 4488, 5541
Bpu1102I GCTNAGC 1 cut(s) 5007
BpuEI CTTGAG 6 cut(s) 305, 2789, 3192, 3584, 4170, 5358
BpuMI CCSGG 2 cut(s) 1654, 5856
BsaAI YACGTR 1 cut(s) 3530
BsaBI GATNNNNATC 2 cut(s) 2913, 3810
BsaHI GRCGYC 3 cut(s) 12, 18, 1085
BsaI GGTCTC 2 cut(s) 219, 321
BsaJI CCNNGG 5 cut(s) 1309, 1552, 1653, 1911, 5182
BsaWI WCCGGW 3 cut(s) 1335, 3840, 4963
BsaXI ACNNNNNCTCC 2 cut(s) 5501, 5531
Bse118I RCCGGY 1 cut(s) 3840
Bse3DI GCAATG 1 cut(s) 4476
Bse8I GATNNNNATC 2 cut(s) 2913, 3810
BseBI CCWGG 9 cut(s) 130, 421, 650, 833, 1017, 1554, 3400, 4028, 5307
BseDI CCNNGG 5 cut(s) 1309, 1552, 1653, 1911, 5182
BseJI GATNNNNATC 2 cut(s) 2913, 3810
BseMI GCAATG 1 cut(s) 4476
BseRI GAGGAG 6 cut(s) 63, 620, 1295, 2548, 3165, 5522
BseSI GKGCMC 2 cut(s) 4963, 5209
BseYI CCCAGC 1 cut(s) 5124
BsgI GTGCAG 5 cut(s) 338, 2814, 3672, 3975, 4704
Bsh1236I CGCG 1 cut(s) 3858
BshTI ACCGGT 1 cut(s) 3840
BsiHKAI GWGCWC 4 cut(s) 3064, 4963, 5008, 5052
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 6 cut(s) 1336, 1653, 1741, 3841, 4964, 5856
BslFI GGGAC 5 cut(s) 47, 1319, 1535, 3556, 4842
BsmBI CGTCTC 3 cut(s) 1523, 5786, 5820
BsmFI GGGAC 5 cut(s) 47, 1319, 1535, 3556, 4842
BsmI GAATGC 2 cut(s) 1076, 3107
Bso31I GGTCTC 2 cut(s) 219, 321
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 6 cut(s) 1796, 3064, 4963, 5008, 5052, 5209
Bsp1407I TGTACA 2 cut(s) 1440, 2384
Bsp1720I GCTNAGC 1 cut(s) 5007
BspACI CCGC 8 cut(s) 161, 182, 371, 1893, 3475, 3504, 4474, 5303
BspFNI CGCG 1 cut(s) 3858
BspHI TCATGA 1 cut(s) 4984
BspLI GGNNCC 4 cut(s) 35, 36, 1307, 4140
BspMAI CTGCAG 2 cut(s) 2133, 3279
BspPI GGATC 3 cut(s) 3745, 3883, 5586
BspTI CTTAAG 1 cut(s) 3797
BspTNI GGTCTC 2 cut(s) 219, 321
BsrDI GCAATG 1 cut(s) 4476
BsrFI RCCGGY 1 cut(s) 3840
BsrGI TGTACA 2 cut(s) 1440, 2384
BssAI RCCGGY 1 cut(s) 3840
BssECI CCNNGG 5 cut(s) 1309, 1552, 1653, 1911, 5182
BssNAI GTATAC 2 cut(s) 1644, 3032
BssNI GRCGYC 3 cut(s) 12, 18, 1085
BssSI CACGAG 3 cut(s) 356, 4668, 5001
BssT1I CCWWGG 1 cut(s) 5182
Bst1107I GTATAC 2 cut(s) 1644, 3032
Bst2BI CACGAG 3 cut(s) 356, 4668, 5001
Bst2UI CCWGG 9 cut(s) 130, 421, 650, 833, 1017, 1554, 3400, 4028, 5307
Bst6I CTCTTC 3 cut(s) 158, 2193, 4043
BstACI GRCGYC 3 cut(s) 12, 18, 1085
BstAFI CTTAAG 1 cut(s) 3797
BstAPI GCANNNNNTGC 1 cut(s) 3485
BstAUI TGTACA 2 cut(s) 1440, 2384
BstBAI YACGTR 1 cut(s) 3530
BstDSI CCRYGG 1 cut(s) 1911
BstEII GGTNACC 1 cut(s) 1747
BstENI CCTNNNNNAGG 2 cut(s) 1412, 5234
BstFNI CGCG 1 cut(s) 3858
BstH2I RGCGCY 1 cut(s) 2594
BstHHI GCGC 4 cut(s) 1677, 2099, 2593, 5492
BstNI CCWGG 9 cut(s) 130, 421, 650, 833, 1017, 1554, 3400, 4028, 5307
BstNSI RCATGY 5 cut(s) 1550, 1840, 3296, 5317, 5801
BstPI GGTNACC 1 cut(s) 1747
BstSFI CTRYAG 7 cut(s) 2129, 2580, 2805, 3275, 4341, 5432, 5711
BstSLI GKGCMC 2 cut(s) 4963, 5209
BstUI CGCG 1 cut(s) 3858
BstV2I GAAGAC 5 cut(s) 139, 627, 726, 1334, 4749
BstX2I RGATCY 7 cut(s) 2737, 2791, 2999, 3880, 4065, 5436, 5559
BstXI CCANNNNNNTGG 2 cut(s) 1814, 5695
BstYI RGATCY 7 cut(s) 2737, 2791, 2999, 3880, 4065, 5436, 5559
BstZ17I GTATAC 2 cut(s) 1644, 3032
BsuI GTATCC 3 cut(s) 1304, 3212, 5153
BtgI CCRYGG 1 cut(s) 1911
BtsI GCAGTG 1 cut(s) 3635
CaiI CAGNNNCTG 3 cut(s) 4274, 4328, 4412
CciI TCATGA 1 cut(s) 4984
CfoI GCGC 4 cut(s) 1677, 2099, 2593, 5492
Cfr10I RCCGGY 1 cut(s) 3840
Cfr13I GGNCC 7 cut(s) 34, 853, 965, 1306, 1328, 1534, 1681
CseI GACGC 4 cut(s) 26, 1074, 3083, 5803
CspAI ACCGGT 1 cut(s) 3840
CspCI CAANNNNNGTGG 2 cut(s) 2952, 2987
DraI TTTAAA 3 cut(s) 939, 3585, 3745
DraIII CACNNNGTG 1 cut(s) 3533
EaeI YGGCCR 2 cut(s) 3, 5685
Eam1104I CTCTTC 3 cut(s) 158, 2193, 4043
EarI CTCTTC 3 cut(s) 158, 2193, 4043
Ecl136II GAGCTC 1 cut(s) 3062
Eco130I CCWWGG 1 cut(s) 5182
Eco24I GRGCYC 2 cut(s) 1796, 3064
Eco31I GGTCTC 2 cut(s) 219, 321
Eco32I GATATC 3 cut(s) 229, 907, 3227
Eco47I GGWCC 5 cut(s) 34, 853, 1306, 1328, 1534
Eco47III AGCGCT 1 cut(s) 2592
Eco53kI GAGCTC 1 cut(s) 3062
Eco72I CACGTG 1 cut(s) 3530
Eco88I CYCGRG 1 cut(s) 62
Eco91I GGTNACC 1 cut(s) 1747
EcoICRI GAGCTC 1 cut(s) 3062
EcoNI CCTNNNNNAGG 2 cut(s) 1412, 5234
EcoO109I RGGNCCY 1 cut(s) 34
EcoO65I GGTNACC 1 cut(s) 1747
EcoRI GAATTC 2 cut(s) 5089, 5240
EcoRII CCWGG 9 cut(s) 128, 419, 648, 831, 1015, 1552, 3398, 4026, 5305
EcoRV GATATC 3 cut(s) 229, 907, 3227
EcoT14I CCWWGG 1 cut(s) 5182
EcoT22I ATGCAT 2 cut(s) 946, 4094
EcoT38I GRGCYC 2 cut(s) 1796, 3064
ErhI CCWWGG 1 cut(s) 5182
Esp3I CGTCTC 3 cut(s) 1523, 5786, 5820
FalI AAGNNNNNCTT 8 cut(s) 786, 818, 1221, 1253, 1701, 1733, 1704, 1736
FaqI GGGAC 5 cut(s) 47, 1319, 1535, 3556, 4842
FauI CCCGC 1 cut(s) 3468
FauNDI CATATG 2 cut(s) 4103, 5216
FbaI TGATCA 3 cut(s) 1051, 4072, 4981
FblI GTMKAC 5 cut(s) 15, 138, 1643, 3031, 4447
FriOI GRGCYC 2 cut(s) 1796, 3064
FspI TGCGCA 1 cut(s) 2098
GlaI GCGC 4 cut(s) 1676, 2098, 2592, 5491
GsaI CCCAGC 1 cut(s) 5128
GsuI CTGGAG 4 cut(s) 483, 4061, 4125, 4565
HaeII RGCGCY 1 cut(s) 2594
HapII CCGG 6 cut(s) 1336, 1653, 1741, 3841, 4964, 5856
HgaI GACGC 4 cut(s) 26, 1074, 3083, 5803
HhaI GCGC 4 cut(s) 1677, 2099, 2593, 5492
Hin1I GRCGYC 3 cut(s) 12, 18, 1085
Hin6I GCGC 4 cut(s) 1675, 2097, 2591, 5490
HinP1I GCGC 4 cut(s) 1675, 2097, 2591, 5490
HincII GTYRAC 6 cut(s) 16, 139, 583, 2206, 3192, 5272
HindII GTYRAC 6 cut(s) 16, 139, 583, 2206, 3192, 5272
HindIII AAGCTT 1 cut(s) 4604
HpaI GTTAAC 2 cut(s) 2206, 3192
HpaII CCGG 6 cut(s) 1336, 1653, 1741, 3841, 4964, 5856
Hpy99I CGWCG 6 cut(s) 14, 17, 20, 86, 140, 5791
HpyCH4IV ACGT 9 cut(s) 12, 689, 775, 1421, 2833, 3529, 4450, 5397, 5450
HpySE526I ACGT 9 cut(s) 12, 689, 775, 1421, 2833, 3529, 4450, 5397, 5450
Hsp92I GRCGYC 3 cut(s) 12, 18, 1085
HspAI GCGC 4 cut(s) 1675, 2097, 2591, 5490
KflI GGGWCCC 1 cut(s) 34
Ksp22I TGATCA 3 cut(s) 1051, 4072, 4981
KspAI GTTAAC 2 cut(s) 2206, 3192
LmnI GCTCC 7 cut(s) 76, 272, 1384, 3178, 3597, 3661, 4144
MaeII ACGT 9 cut(s) 12, 689, 775, 1421, 2833, 3529, 4450, 5397, 5450
MfeI CAATTG 1 cut(s) 5586
MflI RGATCY 7 cut(s) 2737, 2791, 2999, 3880, 4065, 5436, 5559
MhlI GDGCHC 6 cut(s) 1796, 3064, 4963, 5008, 5052, 5209
MlsI TGGCCA 2 cut(s) 5, 5687
MluI ACGCGT 1 cut(s) 3856
MluNI TGGCCA 2 cut(s) 5, 5687
MmeI TCCRAC 5 cut(s) 105, 2710, 2914, 4324, 4812
Mox20I TGGCCA 2 cut(s) 5, 5687
Mph1103I ATGCAT 2 cut(s) 946, 4094
MroXI GAANNNNTTC 4 cut(s) 1713, 1716, 4167, 4197
MscI TGGCCA 2 cut(s) 5, 5687
MslI CAYNNNNRTG 7 cut(s) 360, 1040, 1238, 1841, 4853, 5057, 5063
Msp20I TGGCCA 2 cut(s) 5, 5687
MspA1I CMGCKG 4 cut(s) 223, 2458, 4271, 5128
MspCI CTTAAG 1 cut(s) 3797
MspI CCGG 6 cut(s) 1336, 1653, 1741, 3841, 4964, 5856
MunI CAATTG 1 cut(s) 5586
Mva1269I GAATGC 2 cut(s) 1076, 3107
MvaI CCWGG 9 cut(s) 130, 421, 650, 833, 1017, 1554, 3400, 4028, 5307
MvnI CGCG 1 cut(s) 3858
NciI CCSGG 2 cut(s) 1654, 5856
NdeI CATATG 2 cut(s) 4103, 5216
NlaIV GGNNCC 4 cut(s) 35, 36, 1307, 4140
NmeAIII GCCGAG 1 cut(s) 3322
NmuCI GTSAC 7 cut(s) 663, 1284, 2090, 3300, 3316, 3435, 3499
NsbI TGCGCA 1 cut(s) 2098
NsiI ATGCAT 2 cut(s) 946, 4094
NspI RCATGY 5 cut(s) 1550, 1840, 3296, 5317, 5801
PaeI GCATGC 1 cut(s) 5801
PaeR7I CTCGAG 1 cut(s) 62
PagI TCATGA 1 cut(s) 4984
PcsI WCGNNNNNNNCGW 4 cut(s) 132, 1538, 2004, 2623
PctI GAATGC 2 cut(s) 1076, 3107
PdmI GAANNNNTTC 4 cut(s) 1713, 1716, 4167, 4197
PflFI GACNNNGTC 2 cut(s) 143, 3433
PflMI CCANNNNNTGG 2 cut(s) 4148, 4554
PfoI TCCNGGA 1 cut(s) 5854
PinAI ACCGGT 1 cut(s) 3840
PmaCI CACGTG 1 cut(s) 3530
PmlI CACGTG 1 cut(s) 3530
Ppu21I YACGTR 1 cut(s) 3530
PpuMI RGGWCCY 1 cut(s) 34
PshBI ATTAAT 3 cut(s) 527, 971, 4698
PsiI TTATAA 2 cut(s) 3821, 4643
Psp124BI GAGCTC 1 cut(s) 3064
Psp5II RGGWCCY 1 cut(s) 34
Psp6I CCWGG 9 cut(s) 128, 419, 648, 831, 1015, 1552, 3398, 4026, 5305
PspCI CACGTG 1 cut(s) 3530
PspEI GGTNACC 1 cut(s) 1747
PspFI CCCAGC 1 cut(s) 5124
PspGI CCWGG 9 cut(s) 128, 419, 648, 831, 1015, 1552, 3398, 4026, 5305
PspN4I GGNNCC 4 cut(s) 35, 36, 1307, 4140
PspPI GGNCC 7 cut(s) 34, 853, 965, 1306, 1328, 1534, 1681
PspPPI RGGWCCY 1 cut(s) 34
PstI CTGCAG 2 cut(s) 2133, 3279
PstNI CAGNNNCTG 3 cut(s) 4274, 4328, 4412
PsuI RGATCY 7 cut(s) 2737, 2791, 2999, 3880, 4065, 5436, 5559
PsyI GACNNNGTC 2 cut(s) 143, 3433
PvuII CAGCTG 4 cut(s) 223, 2458, 4271, 5128
RseI CAYNNNNRTG 7 cut(s) 360, 1040, 1238, 1841, 4853, 5057, 5063
SacI GAGCTC 1 cut(s) 3064
SalI GTCGAC 2 cut(s) 14, 137
Sau96I GGNCC 7 cut(s) 34, 853, 965, 1306, 1328, 1534, 1681
ScaI AGTACT 2 cut(s) 2216, 4742
SduI GDGCHC 6 cut(s) 1796, 3064, 4963, 5008, 5052, 5209
SfcI CTRYAG 7 cut(s) 2129, 2580, 2805, 3275, 4341, 5432, 5711
Sfr274I CTCGAG 1 cut(s) 62
SgrDI CGTCGACG 1 cut(s) 14
SinI GGWCC 5 cut(s) 34, 853, 1306, 1328, 1534
SlaI CTCGAG 1 cut(s) 62
SmiMI CAYNNNNRTG 7 cut(s) 360, 1040, 1238, 1841, 4853, 5057, 5063
SmlI CTYRAG 8 cut(s) 62, 320, 2768, 3207, 3563, 3797, 4185, 5373
SmoI CTYRAG 8 cut(s) 62, 320, 2768, 3207, 3563, 3797, 4185, 5373
SphI GCATGC 1 cut(s) 5801
SsiI CCGC 8 cut(s) 161, 182, 371, 1893, 3475, 3504, 4474, 5303
SstI GAGCTC 1 cut(s) 3064
StyI CCWWGG 1 cut(s) 5182
TaiI ACGT 9 cut(s) 15, 692, 778, 1424, 2836, 3532, 4453, 5400, 5453
TaqII GACCGA 2 cut(s) 1323, 3446
TatI WGTACW 8 cut(s) 671, 1440, 2164, 2214, 2384, 4052, 4740, 5691
TauI GCSGC 2 cut(s) 163, 185
TseFI GTSAC 7 cut(s) 663, 1284, 2090, 3300, 3316, 3435, 3499
Tsp45I GTSAC 7 cut(s) 663, 1284, 2090, 3300, 3316, 3435, 3499
TspGWI ACGGA 3 cut(s) 1547, 1900, 5804
Tth111I GACNNNGTC 2 cut(s) 143, 3433
Van91I CCANNNNNTGG 2 cut(s) 4148, 4554
Vha464I CTTAAG 1 cut(s) 3797
VneI GTGCAC 1 cut(s) 4959
VpaK11BI GGWCC 5 cut(s) 34, 853, 1306, 1328, 1534
VspI ATTAAT 3 cut(s) 527, 971, 4698
XagI CCTNNNNNAGG 2 cut(s) 1412, 5234
XbaI TCTAGA 4 cut(s) 448, 2476, 3379, 5495
XceI RCATGY 5 cut(s) 1550, 1840, 3296, 5317, 5801
XcmI CCANNNNNNNNNTGG 1 cut(s) 5113
XhoI CTCGAG 1 cut(s) 62
XmiI GTMKAC 5 cut(s) 15, 138, 1643, 3031, 4447
XmnI GAANNNNTTC 4 cut(s) 1713, 1716, 4167, 4197
ZraI GACGTC 1 cut(s) 13
ZrmI AGTACT 2 cut(s) 2216, 4742
Zsp2I ATGCAT 2 cut(s) 946, 4094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.