Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g02354 FvH4_2g02432 |
| rosa_chinensis | RchiOBHm_Chr4g0399421 |
| rosa_multiflora | Rmu_sc0015308.1_g000001 |
| rosa_samantha | Rh6DG066000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 260, 388 |
| AciI | CCGC | 1 cut(s) | 195 |
| AcsI | RAATTY | 1 cut(s) | 221 |
| AcuI | CTGAAG | 2 cut(s) | 267, 297 |
| AfaI | GTAC | 1 cut(s) | 66 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 176 |
| AgsI | TTSAA | 4 cut(s) | 214, 262, 359, 502 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 270 |
| AhlI | ACTAGT | 1 cut(s) | 13 |
| Alw26I | GTCTC | 1 cut(s) | 503 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 275 |
| AoxI | GGCC | 1 cut(s) | 419 |
| ApeKI | GCWGC | 1 cut(s) | 85 |
| ApoI | RAATTY | 1 cut(s) | 221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 166, 198 |
| AspLEI | GCGC | 1 cut(s) | 317 |
| AspS9I | GGNCC | 2 cut(s) | 272, 419 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BbsI | GAAGAC | 1 cut(s) | 269 |
| BbvCI | CCTCAGC | 1 cut(s) | 45 |
| BbvI | GCAGC | 1 cut(s) | 97 |
| BccI | CCATC | 4 cut(s) | 70, 336, 394, 513 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 38, 72 |
| BcoDI | GTCTC | 1 cut(s) | 503 |
| BcuI | ACTAGT | 1 cut(s) | 13 |
| BfaI | CTAG | 3 cut(s) | 14, 435, 456 |
| BfmI | CTRYAG | 3 cut(s) | 267, 291, 477 |
| BfoI | RGCGCY | 1 cut(s) | 318 |
| BfuAI | ACCTGC | 2 cut(s) | 260, 388 |
| BisI | GCNGC | 1 cut(s) | 86 |
| BlsI | GCNGC | 1 cut(s) | 87 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 270 |
| BmgT120I | GGNCC | 2 cut(s) | 272, 419 |
| BmiI | GGNNCC | 2 cut(s) | 199, 465 |
| BmsI | GCATC | 1 cut(s) | 260 |
| BpiI | GAAGAC | 1 cut(s) | 269 |
| Bpu10I | CCTNAGC | 1 cut(s) | 45 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 176 |
| Bse1I | ACTGG | 1 cut(s) | 517 |
| BseGI | GGATG | 2 cut(s) | 81, 524 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BseMII | CTCAG | 2 cut(s) | 59, 498 |
| BseNI | ACTGG | 1 cut(s) | 517 |
| BseRI | GAGGAG | 3 cut(s) | 33, 85, 245 |
| BseXI | GCAGC | 1 cut(s) | 97 |
| BshFI | GGCC | 1 cut(s) | 421 |
| BslFI | GGGAC | 1 cut(s) | 227 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 176 |
| BsmAI | GTCTC | 1 cut(s) | 503 |
| BsmFI | GGGAC | 1 cut(s) | 227 |
| BsnI | GGCC | 1 cut(s) | 421 |
| BspACI | CCGC | 1 cut(s) | 195 |
| BspANI | GGCC | 1 cut(s) | 421 |
| BspCNI | CTCAG | 2 cut(s) | 58, 499 |
| BspLI | GGNNCC | 2 cut(s) | 199, 465 |
| BspMAI | CTGCAG | 2 cut(s) | 271, 295 |
| BspMI | ACCTGC | 2 cut(s) | 260, 388 |
| BsrI | ACTGG | 1 cut(s) | 517 |
| Bst4CI | ACNGT | 1 cut(s) | 478 |
| Bst6I | CTCTTC | 2 cut(s) | 354, 363 |
| BstDEI | CTNAG | 2 cut(s) | 45, 507 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 174 |
| BstF5I | GGATG | 2 cut(s) | 81, 524 |
| BstH2I | RGCGCY | 1 cut(s) | 318 |
| BstHHI | GCGC | 1 cut(s) | 317 |
| BstMAI | GTCTC | 1 cut(s) | 503 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 46 |
| BstSFI | CTRYAG | 3 cut(s) | 267, 291, 477 |
| BstV1I | GCAGC | 1 cut(s) | 97 |
| BstV2I | GAAGAC | 1 cut(s) | 269 |
| BsuRI | GGCC | 1 cut(s) | 421 |
| BtgZI | GCGATG | 1 cut(s) | 355 |
| BtsCI | GGATG | 2 cut(s) | 81, 524 |
| BveI | ACCTGC | 2 cut(s) | 260, 388 |
| CaiI | CAGNNNCTG | 1 cut(s) | 275 |
| CfoI | GCGC | 1 cut(s) | 317 |
| Cfr13I | GGNCC | 2 cut(s) | 272, 419 |
| Csp6I | GTAC | 1 cut(s) | 65 |
| CviJI | RGCY | 2 cut(s) | 421, 506 |
| CviKI_1 | RGCY | 2 cut(s) | 421, 506 |
| CviQI | GTAC | 1 cut(s) | 65 |
| DdeI | CTNAG | 2 cut(s) | 45, 507 |
| DriI | GACNNNNNGTC | 1 cut(s) | 270 |
| Eam1104I | CTCTTC | 2 cut(s) | 354, 363 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 270 |
| EarI | CTCTTC | 2 cut(s) | 354, 363 |
| EciI | GGCGGA | 1 cut(s) | 210 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| Eco57I | CTGAAG | 2 cut(s) | 267, 297 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 174 |
| EcoO109I | RGGNCCY | 1 cut(s) | 272 |
| FaiI | YATR | 6 cut(s) | 23, 304, 306, 428, 469, 486 |
| FaqI | GGGAC | 1 cut(s) | 227 |
| Fnu4HI | GCNGC | 1 cut(s) | 86 |
| FokI | GGATG | 1 cut(s) | 88 |
| Fsp4HI | GCNGC | 1 cut(s) | 86 |
| FspBI | CTAG | 3 cut(s) | 14, 435, 456 |
| GlaI | GCGC | 1 cut(s) | 316 |
| GluI | GCNGC | 1 cut(s) | 86 |
| HaeII | RGCGCY | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 421 |
| HhaI | GCGC | 1 cut(s) | 317 |
| Hin6I | GCGC | 1 cut(s) | 315 |
| HinP1I | GCGC | 1 cut(s) | 315 |
| HincII | GTYRAC | 1 cut(s) | 185 |
| HindII | GTYRAC | 1 cut(s) | 185 |
| Hpy166II | GTNNAC | 2 cut(s) | 185, 453 |
| Hpy188III | TCNNGA | 1 cut(s) | 275 |
| Hpy8I | GTNNAC | 2 cut(s) | 185, 453 |
| HpyAV | CCTTC | 5 cut(s) | 208, 272, 394, 403, 496 |
| HpyCH4III | ACNGT | 1 cut(s) | 478 |
| HpyCH4V | TGCA | 3 cut(s) | 11, 269, 293 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 46 |
| HpyF3I | CTNAG | 2 cut(s) | 45, 507 |
| HspAI | GCGC | 1 cut(s) | 315 |
| LmnI | GCTCC | 2 cut(s) | 25, 388 |
| Lsp1109I | GCAGC | 1 cut(s) | 97 |
| LweI | GCATC | 1 cut(s) | 260 |
| MaeI | CTAG | 3 cut(s) | 14, 435, 456 |
| MboII | GAAGA | 6 cut(s) | 110, 133, 274, 371, 380, 386 |
| MluCI | AATT | 1 cut(s) | 221 |
| MmeI | TCCRAC | 1 cut(s) | 377 |
| MseI | TTAA | 1 cut(s) | 447 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 46 |
| NlaIV | GGNNCC | 2 cut(s) | 199, 465 |
| PkrI | GCNGC | 1 cut(s) | 87 |
| PpuMI | RGGWCCY | 1 cut(s) | 272 |
| Psp5II | RGGWCCY | 1 cut(s) | 272 |
| PspN4I | GGNNCC | 2 cut(s) | 199, 465 |
| PspPI | GGNCC | 2 cut(s) | 272, 419 |
| PspPPI | RGGWCCY | 1 cut(s) | 272 |
| PstI | CTGCAG | 2 cut(s) | 271, 295 |
| PstNI | CAGNNNCTG | 1 cut(s) | 275 |
| RsaI | GTAC | 1 cut(s) | 66 |
| RsaNI | GTAC | 1 cut(s) | 65 |
| SaqAI | TTAA | 1 cut(s) | 447 |
| SatI | GCNGC | 1 cut(s) | 86 |
| Sau96I | GGNCC | 2 cut(s) | 272, 419 |
| SetI | ASST | 5 cut(s) | 161, 274, 382, 436, 465 |
| SfaNI | GCATC | 1 cut(s) | 260 |
| SfcI | CTRYAG | 3 cut(s) | 267, 291, 477 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SpeI | ACTAGT | 1 cut(s) | 13 |
| Sse9I | AATT | 1 cut(s) | 221 |
| SsiI | CCGC | 1 cut(s) | 195 |
| SspMI | CTAG | 3 cut(s) | 14, 435, 456 |
| TaaI | ACNGT | 1 cut(s) | 478 |
| TaqI | TCGA | 1 cut(s) | 119 |
| TasI | AATT | 1 cut(s) | 221 |
| Tru1I | TTAA | 1 cut(s) | 447 |
| Tru9I | TTAA | 1 cut(s) | 447 |
| TseI | GCWGC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 2 cut(s) | 43, 167 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 174 |
| XapI | RAATTY | 1 cut(s) | 221 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 393 |
| XspI | CTAG | 3 cut(s) | 14, 435, 456 |