FvH4_2g14850

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
13033660 .. 13035359
1700 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g14850.t1

Sequence Viewer

Length: 393 bp
ATGAATATTCTGAAGCTCATTTTCAGACTAGTCTTTGGAAATGTCATCGCTACGTTCTTCTTCTGGTCGCCAATGAGTAAATTCAAGCAGATCATAACGAACAACTTTGCAGATCAGCTCTCAAGCATTTCATACCAGATCCATTTCTTCAAGTGCCTCTTTTCAGCTTGCAAAAAGAAAAACAGGTATTGGTTGCCGTTTGTGTCACCAAACAGCAATTTGATATCAACCATGAATGGCATTGGTGCAGCTATTGAAGCCATCAACCTGTTCATCCCCATGATGTTCTCCCCGAAGAGTGAGAAGGACAAACTTCTTGAAGTGCTTGAGTTTGTATTCTTCTTTAAGCACGATGAGAAATGCAAAGAATTATCTCAACATTACACTAGATGA

Protein Analysis

131

Amino Acids

15.3

Weight (kDa)

9.48

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017984)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g14850
malus_domestica MD05G1012300.v1.1
prunus_persica Prupe.8G017500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0277421
rosa_laevigata RLG00000013304
rosa_roxburghii Rroxscaffold_7G00191350
rosa_samantha Rh6AG218800 Rh6BG222700 Rh6CG225300 Rh6DG215600
rosa_wichuraiana Rw6G019170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 133
AcsI RAATTY 1 cut(s) 80
AcuI CTGAAG 1 cut(s) 32
AgsI TTSAA 4 cut(s) 85, 151, 257, 320
AhlI ACTAGT 1 cut(s) 28
AluBI AGCT 4 cut(s) 16, 118, 167, 251
AluI AGCT 4 cut(s) 16, 118, 167, 251
AlwI GGATC 1 cut(s) 133
ApeKI GCWGC 1 cut(s) 248
ApoI RAATTY 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 198
BbvI GCAGC 1 cut(s) 260
BccI CCATC 1 cut(s) 269
BceAI ACGGC 1 cut(s) 181
BcuI ACTAGT 1 cut(s) 28
BfaI CTAG 2 cut(s) 29, 387
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
BpuEI CTTGAG 2 cut(s) 106, 347
BseGI GGATG 1 cut(s) 273
BseXI GCAGC 1 cut(s) 260
BsgI GTGCAG 1 cut(s) 267
Bsp143I GATC 3 cut(s) 90, 112, 138
BspPI GGATC 1 cut(s) 133
BssMI GATC 3 cut(s) 90, 112, 138
Bst6I CTCTTC 1 cut(s) 290
BstC8I GCNNGC 1 cut(s) 169
BstF5I GGATG 1 cut(s) 273
BstKTI GATC 3 cut(s) 93, 115, 141
BstMBI GATC 3 cut(s) 90, 112, 138
BstMWI GCNNNNNNNGC 1 cut(s) 257
BstV1I GCAGC 1 cut(s) 260
BstX2I RGATCY 1 cut(s) 138
BstYI RGATCY 1 cut(s) 138
BtgZI GCGATG 1 cut(s) 31
BtsCI GGATG 1 cut(s) 273
Cac8I GCNNGC 1 cut(s) 169
CviAII CATG 2 cut(s) 232, 280
CviJI RGCY 5 cut(s) 16, 118, 167, 251, 260
CviKI_1 RGCY 5 cut(s) 16, 118, 167, 251, 260
DpnI GATC 3 cut(s) 92, 114, 140
DpnII GATC 3 cut(s) 90, 112, 138
Eam1104I CTCTTC 1 cut(s) 290
EarI CTCTTC 1 cut(s) 290
Eco32I GATATC 1 cut(s) 225
Eco57I CTGAAG 1 cut(s) 32
EcoRV GATATC 1 cut(s) 225
FaeI CATG 2 cut(s) 235, 283
FaiI YATR 4 cut(s) 95, 133, 233, 281
FalI AAGNNNNNCTT 2 cut(s) 143, 175
FatI CATG 2 cut(s) 231, 279
Fnu4HI GCNGC 1 cut(s) 249
FokI GGATG 1 cut(s) 260
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 2 cut(s) 29, 387
GluI GCNGC 1 cut(s) 249
Hin1II CATG 2 cut(s) 235, 283
HphI GGTGA 1 cut(s) 198
Hpy188I TCNGA 2 cut(s) 12, 26
Hpy188III TCNNGA 1 cut(s) 317
HpyAV CCTTC 1 cut(s) 298
HpyCH4IV ACGT 1 cut(s) 53
HpyCH4V TGCA 4 cut(s) 110, 171, 248, 363
HpyF10VI GCNNNNNNNGC 1 cut(s) 257
HpySE526I ACGT 1 cut(s) 53
Hsp92II CATG 2 cut(s) 235, 283
Kzo9I GATC 3 cut(s) 90, 112, 138
LpnPI CCDG 4 cut(s) 49, 149, 169, 281
Lsp1109I GCAGC 1 cut(s) 260
MaeI CTAG 2 cut(s) 29, 387
MaeII ACGT 1 cut(s) 53
MaeIII GTNAC 1 cut(s) 204
MalI GATC 3 cut(s) 92, 114, 140
MboI GATC 3 cut(s) 90, 112, 138
MboII GAAGA 5 cut(s) 49, 52, 139, 307, 331
MflI RGATCY 1 cut(s) 138
MluCI AATT 3 cut(s) 80, 217, 368
MnlI CCTC 1 cut(s) 167
MseI TTAA 1 cut(s) 345
MslI CAYNNNNRTG 1 cut(s) 278
MwoI GCNNNNNNNGC 1 cut(s) 257
NdeII GATC 3 cut(s) 90, 112, 138
NlaIII CATG 2 cut(s) 235, 283
NmuCI GTSAC 1 cut(s) 204
PkrI GCNGC 1 cut(s) 250
PsuI RGATCY 1 cut(s) 138
RseI CAYNNNNRTG 1 cut(s) 278
SaqAI TTAA 1 cut(s) 345
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 3 cut(s) 90, 112, 138
SetI ASST 7 cut(s) 18, 56, 120, 169, 188, 253, 270
SmiMI CAYNNNNRTG 1 cut(s) 278
SmlI CTYRAG 2 cut(s) 121, 326
SmoI CTYRAG 2 cut(s) 121, 326
SpeI ACTAGT 1 cut(s) 28
Sse9I AATT 3 cut(s) 80, 217, 368
SspI AATATT 1 cut(s) 7
SspMI CTAG 2 cut(s) 29, 387
TaiI ACGT 1 cut(s) 56
TasI AATT 3 cut(s) 80, 217, 368
Tru1I TTAA 1 cut(s) 345
Tru9I TTAA 1 cut(s) 345
TseFI GTSAC 1 cut(s) 204
TseI GCWGC 1 cut(s) 248
Tsp45I GTSAC 1 cut(s) 204
TspDTI ATGAA 4 cut(s) 17, 120, 248, 262
XapI RAATTY 1 cut(s) 80
XspI CTAG 2 cut(s) 29, 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.