D-amino acid dehydrogenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48440 AT5G48440 AT5G48440 |
| fragaria_vesca | FvH4_2g17671 |
| malus_domestica | MD05G1157000.v1.1 |
| prunus_persica | Prupe.8G189100_v2.0.a1 Prupe.8G189100_v2.0.a1 Prupe.8G189100_v2.0.a1 Prupe.8G189100_v2.0.a1 Prupe.8G189200_v2.0.a1 |
| pyrus_communis | pycom05g14960 |
| rosa_chinensis | RchiOBHm_Chr6g0282641 |
| rosa_laevigata | RLG00000012878 |
| rosa_multiflora | Rmu_sc0003070.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00186150 |
| rosa_rugosa | Rorug06G0148200 |
| rosa_samantha | Rh6AG261600 Rh6BG264700 Rh6CG263800 Rh6DG256000 |
| rosa_wichuraiana | Rw6G022610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 747 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 287, 308, 920 |
| AatII | GACGTC | 1 cut(s) | 918 |
| AccB1I | GGYRCC | 1 cut(s) | 332 |
| AccBSI | CCGCTC | 1 cut(s) | 170 |
| AciI | CCGC | 7 cut(s) | 88, 91, 144, 150, 168, 198, 1129 |
| AclWI | GGATC | 2 cut(s) | 746, 877 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AcsI | RAATTY | 3 cut(s) | 116, 958, 1199 |
| AcuI | CTGAAG | 1 cut(s) | 1173 |
| AcyI | GRCGYC | 3 cut(s) | 51, 333, 915 |
| AfaI | GTAC | 2 cut(s) | 578, 909 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 258, 320, 935, 1301 |
| AgeI | ACCGGT | 1 cut(s) | 190 |
| AgsI | TTSAA | 4 cut(s) | 121, 698, 974, 1080 |
| AjnI | CCWGG | 2 cut(s) | 812, 1312 |
| AleI | CACNNNNGTG | 1 cut(s) | 1154 |
| AluBI | AGCT | 8 cut(s) | 11, 382, 391, 412, 560, 667, 854, 1193 |
| AluI | AGCT | 8 cut(s) | 11, 382, 391, 412, 560, 667, 854, 1193 |
| Alw26I | GTCTC | 1 cut(s) | 1050 |
| AlwI | GGATC | 2 cut(s) | 746, 877 |
| AoxI | GGCC | 3 cut(s) | 337, 727, 837 |
| ApeKI | GCWGC | 5 cut(s) | 375, 547, 641, 851, 1125 |
| ApoI | RAATTY | 3 cut(s) | 116, 958, 1199 |
| AseI | ATTAAT | 1 cut(s) | 1425 |
| AsiGI | ACCGGT | 1 cut(s) | 190 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 74, 1167, 1203 |
| AspLEI | GCGC | 1 cut(s) | 335 |
| AspS9I | GGNCC | 4 cut(s) | 280, 454, 727, 1186 |
| AsuC2I | CCSGG | 3 cut(s) | 67, 259, 1050 |
| AsuHPI | GGTGA | 2 cut(s) | 602, 932 |
| AvaII | GGWCC | 3 cut(s) | 280, 454, 1186 |
| BanI | GGYRCC | 1 cut(s) | 332 |
| BbvCI | CCTCAGC | 1 cut(s) | 513 |
| BbvI | GCAGC | 5 cut(s) | 387, 559, 628, 863, 1137 |
| BccI | CCATC | 3 cut(s) | 349, 985, 1280 |
| BceAI | ACGGC | 3 cut(s) | 38, 278, 668 |
| BciT130I | CCWGG | 2 cut(s) | 814, 1314 |
| BciVI | GTATCC | 3 cut(s) | 205, 625, 1090 |
| BclI | TGATCA | 3 cut(s) | 222, 1009, 1060 |
| BcnI | CCSGG | 3 cut(s) | 67, 259, 1050 |
| BcoDI | GTCTC | 1 cut(s) | 1050 |
| BfaI | CTAG | 2 cut(s) | 947, 1406 |
| BfmI | CTRYAG | 2 cut(s) | 829, 1020 |
| BfoI | RGCGCY | 1 cut(s) | 336 |
| BfuI | GTATCC | 3 cut(s) | 205, 625, 1090 |
| BglII | AGATCT | 1 cut(s) | 773 |
| BisI | GCNGC | 7 cut(s) | 91, 376, 548, 642, 852, 1126, 1129 |
| BlsI | GCNGC | 7 cut(s) | 92, 377, 549, 643, 853, 1127, 1130 |
| BmcAI | AGTACT | 1 cut(s) | 578 |
| Bme1390I | CCNGG | 5 cut(s) | 67, 259, 814, 1050, 1314 |
| Bme18I | GGWCC | 3 cut(s) | 280, 454, 1186 |
| BmgT120I | GGNCC | 4 cut(s) | 280, 454, 727, 1186 |
| BmiI | GGNNCC | 6 cut(s) | 189, 232, 334, 456, 609, 1187 |
| BmrFI | CCNGG | 5 cut(s) | 67, 259, 814, 1050, 1314 |
| BmrI | ACTGGG | 3 cut(s) | 479, 645, 1350 |
| BmsI | GCATC | 3 cut(s) | 209, 661, 867 |
| BmuI | ACTGGG | 3 cut(s) | 479, 645, 1350 |
| BpmI | CTGGAG | 1 cut(s) | 1215 |
| Bpu10I | CCTNAGC | 1 cut(s) | 513 |
| BpuEI | CTTGAG | 1 cut(s) | 974 |
| BpuMI | CCSGG | 3 cut(s) | 67, 259, 1050 |
| BsaBI | GATNNNNATC | 1 cut(s) | 675 |
| BsaHI | GRCGYC | 3 cut(s) | 51, 333, 915 |
| BsaJI | CCNNGG | 2 cut(s) | 340, 982 |
| BsaWI | WCCGGW | 1 cut(s) | 190 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 258, 320, 935, 1301 |
| Bse118I | RCCGGY | 4 cut(s) | 190, 329, 335, 587 |
| Bse1I | ACTGG | 6 cut(s) | 474, 640, 755, 915, 1295, 1345 |
| Bse3DI | GCAATG | 2 cut(s) | 557, 1417 |
| Bse8I | GATNNNNATC | 1 cut(s) | 675 |
| BseBI | CCWGG | 2 cut(s) | 814, 1314 |
| BseDI | CCNNGG | 2 cut(s) | 340, 982 |
| BseGI | GGATG | 4 cut(s) | 200, 360, 676, 1030 |
| BseJI | GATNNNNATC | 1 cut(s) | 675 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 258, 320, 935, 1301 |
| BseMI | GCAATG | 2 cut(s) | 557, 1417 |
| BseMII | CTCAG | 6 cut(s) | 389, 420, 504, 729, 1186, 1407 |
| BseNI | ACTGG | 6 cut(s) | 474, 640, 755, 915, 1295, 1345 |
| BseRI | GAGGAG | 3 cut(s) | 434, 530, 1434 |
| BseXI | GCAGC | 5 cut(s) | 387, 559, 628, 863, 1137 |
| BseYI | CCCAGC | 4 cut(s) | 391, 560, 663, 1139 |
| BsgI | GTGCAG | 2 cut(s) | 1132, 1416 |
| BshFI | GGCC | 3 cut(s) | 339, 729, 839 |
| BshNI | GGYRCC | 1 cut(s) | 332 |
| BshTI | ACCGGT | 1 cut(s) | 190 |
| BsiSI | CCGG | 8 cut(s) | 67, 191, 234, 259, 330, 336, 588, 1050 |
| BslFI | GGGAC | 3 cut(s) | 296, 902, 1199 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 258, 320, 935, 1301 |
| BsmAI | GTCTC | 1 cut(s) | 1050 |
| BsmFI | GGGAC | 3 cut(s) | 296, 902, 1199 |
| BsnI | GGCC | 3 cut(s) | 339, 729, 839 |
| Bsp143I | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| Bsp19I | CCATGG | 1 cut(s) | 982 |
| BspACI | CCGC | 7 cut(s) | 88, 91, 144, 150, 168, 198, 1129 |
| BspANI | GGCC | 3 cut(s) | 339, 729, 839 |
| BspCNI | CTCAG | 6 cut(s) | 390, 421, 505, 730, 1185, 1408 |
| BspLI | GGNNCC | 6 cut(s) | 189, 232, 334, 456, 609, 1187 |
| BspPI | GGATC | 2 cut(s) | 746, 877 |
| BspQI | GCTCTTC | 1 cut(s) | 181 |
| BspT107I | GGYRCC | 1 cut(s) | 332 |
| BsrBI | CCGCTC | 1 cut(s) | 170 |
| BsrDI | GCAATG | 2 cut(s) | 557, 1417 |
| BsrFI | RCCGGY | 4 cut(s) | 190, 329, 335, 587 |
| BsrI | ACTGG | 6 cut(s) | 474, 640, 755, 915, 1295, 1345 |
| BssAI | RCCGGY | 4 cut(s) | 190, 329, 335, 587 |
| BssECI | CCNNGG | 2 cut(s) | 340, 982 |
| BssMI | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| BssNI | GRCGYC | 3 cut(s) | 51, 333, 915 |
| BssT1I | CCWWGG | 2 cut(s) | 340, 982 |
| Bst2UI | CCWGG | 2 cut(s) | 814, 1314 |
| Bst4CI | ACNGT | 3 cut(s) | 830, 1024, 1102 |
| Bst6I | CTCTTC | 2 cut(s) | 67, 181 |
| BstACI | GRCGYC | 3 cut(s) | 51, 333, 915 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1439 |
| BstC8I | GCNNGC | 5 cut(s) | 172, 337, 380, 494, 1055 |
| BstDEI | CTNAG | 6 cut(s) | 398, 429, 513, 738, 1172, 1416 |
| BstDSI | CCRYGG | 1 cut(s) | 982 |
| BstEII | GGTNACC | 1 cut(s) | 938 |
| BstF5I | GGATG | 4 cut(s) | 200, 360, 676, 1030 |
| BstH2I | RGCGCY | 1 cut(s) | 336 |
| BstHHI | GCGC | 1 cut(s) | 335 |
| BstKTI | GATC | 6 cut(s) | 225, 754, 776, 872, 1012, 1063 |
| BstMAI | GTCTC | 1 cut(s) | 1050 |
| BstMBI | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 332, 388, 680, 1318, 1439 |
| BstNI | CCWGG | 2 cut(s) | 814, 1314 |
| BstNSI | RCATGY | 2 cut(s) | 496, 1282 |
| BstPI | GGTNACC | 1 cut(s) | 938 |
| BstSCI | CCNGG | 5 cut(s) | 65, 257, 812, 1048, 1312 |
| BstSFI | CTRYAG | 2 cut(s) | 829, 1020 |
| BstV1I | GCAGC | 5 cut(s) | 387, 559, 628, 863, 1137 |
| BstX2I | RGATCY | 1 cut(s) | 773 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 847, 1139 |
| BstYI | RGATCY | 1 cut(s) | 773 |
| BsuI | GTATCC | 3 cut(s) | 205, 625, 1090 |
| BsuRI | GGCC | 3 cut(s) | 339, 729, 839 |
| BtgI | CCRYGG | 1 cut(s) | 982 |
| BtsCI | GGATG | 4 cut(s) | 200, 360, 676, 1030 |
| BtsIMutI | CAGTG | 5 cut(s) | 762, 826, 1107, 1149, 1338 |
| Cac8I | GCNNGC | 5 cut(s) | 172, 337, 380, 494, 1055 |
| CfoI | GCGC | 1 cut(s) | 335 |
| Cfr10I | RCCGGY | 4 cut(s) | 190, 329, 335, 587 |
| Cfr13I | GGNCC | 4 cut(s) | 280, 454, 727, 1186 |
| CseI | GACGC | 1 cut(s) | 59 |
| Csp6I | GTAC | 2 cut(s) | 577, 908 |
| CspAI | ACCGGT | 1 cut(s) | 190 |
| CviAII | CATG | 6 cut(s) | 493, 881, 983, 1279, 1346, 1448 |
| CviQI | GTAC | 2 cut(s) | 577, 908 |
| DdeI | CTNAG | 6 cut(s) | 398, 429, 513, 738, 1172, 1416 |
| DinI | GGCGCC | 1 cut(s) | 334 |
| DpnI | GATC | 6 cut(s) | 224, 753, 775, 871, 1011, 1062 |
| DpnII | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 287, 308, 920 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 287, 308, 920 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Eam1104I | CTCTTC | 2 cut(s) | 67, 181 |
| EarI | CTCTTC | 2 cut(s) | 67, 181 |
| EciI | GGCGGA | 2 cut(s) | 77, 133 |
| Eco130I | CCWWGG | 2 cut(s) | 340, 982 |
| Eco47I | GGWCC | 3 cut(s) | 280, 454, 1186 |
| Eco57I | CTGAAG | 1 cut(s) | 1173 |
| Eco91I | GGTNACC | 1 cut(s) | 938 |
| EcoO65I | GGTNACC | 1 cut(s) | 938 |
| EcoRI | GAATTC | 1 cut(s) | 1199 |
| EcoRII | CCWGG | 2 cut(s) | 812, 1312 |
| EcoT14I | CCWWGG | 2 cut(s) | 340, 982 |
| EcoT22I | ATGCAT | 1 cut(s) | 882 |
| EgeI | GGCGCC | 1 cut(s) | 334 |
| EheI | GGCGCC | 1 cut(s) | 334 |
| ErhI | CCWWGG | 2 cut(s) | 340, 982 |
| FaeI | CATG | 6 cut(s) | 496, 884, 986, 1282, 1349, 1451 |
| FaqI | GGGAC | 3 cut(s) | 296, 902, 1199 |
| FatI | CATG | 6 cut(s) | 492, 880, 982, 1278, 1345, 1447 |
| FauI | CCCGC | 1 cut(s) | 175 |
| FbaI | TGATCA | 3 cut(s) | 222, 1009, 1060 |
| Fnu4HI | GCNGC | 7 cut(s) | 91, 376, 548, 642, 852, 1126, 1129 |
| FokI | GGATG | 4 cut(s) | 187, 367, 683, 1017 |
| Fsp4HI | GCNGC | 7 cut(s) | 91, 376, 548, 642, 852, 1126, 1129 |
| FspBI | CTAG | 2 cut(s) | 947, 1406 |
| GlaI | GCGC | 1 cut(s) | 334 |
| GluI | GCNGC | 7 cut(s) | 91, 376, 548, 642, 852, 1126, 1129 |
| GsaI | CCCAGC | 4 cut(s) | 395, 564, 667, 1143 |
| GsuI | CTGGAG | 1 cut(s) | 1215 |
| HaeII | RGCGCY | 1 cut(s) | 336 |
| HaeIII | GGCC | 3 cut(s) | 339, 729, 839 |
| HapII | CCGG | 8 cut(s) | 67, 191, 234, 259, 330, 336, 588, 1050 |
| HgaI | GACGC | 1 cut(s) | 59 |
| HhaI | GCGC | 1 cut(s) | 335 |
| Hin1I | GRCGYC | 3 cut(s) | 51, 333, 915 |
| Hin1II | CATG | 6 cut(s) | 496, 884, 986, 1282, 1349, 1451 |
| Hin6I | GCGC | 1 cut(s) | 333 |
| HinP1I | GCGC | 1 cut(s) | 333 |
| HincII | GTYRAC | 2 cut(s) | 249, 979 |
| HindII | GTYRAC | 2 cut(s) | 249, 979 |
| HindIII | AAGCTT | 1 cut(s) | 410 |
| HinfI | GANTC | 3 cut(s) | 70, 659, 896 |
| HpaII | CCGG | 8 cut(s) | 67, 191, 234, 259, 330, 336, 588, 1050 |
| HphI | GGTGA | 2 cut(s) | 602, 932 |
| Hpy166II | GTNNAC | 2 cut(s) | 249, 979 |
| Hpy188I | TCNGA | 9 cut(s) | 187, 230, 280, 444, 724, 901, 990, 1065, 1234 |
| Hpy188III | TCNNGA | 2 cut(s) | 695, 805 |
| Hpy8I | GTNNAC | 2 cut(s) | 249, 979 |
| Hpy99I | CGWCG | 2 cut(s) | 53, 293 |
| HpyAV | CCTTC | 5 cut(s) | 28, 94, 598, 953, 1343 |
| HpyCH4III | ACNGT | 3 cut(s) | 830, 1024, 1102 |
| HpyCH4IV | ACGT | 1 cut(s) | 915 |
| HpyCH4V | TGCA | 4 cut(s) | 826, 880, 1149, 1433 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 332, 388, 680, 1318, 1439 |
| HpyF3I | CTNAG | 6 cut(s) | 398, 429, 513, 738, 1172, 1416 |
| HpySE526I | ACGT | 1 cut(s) | 915 |
| Hsp92I | GRCGYC | 3 cut(s) | 51, 333, 915 |
| Hsp92II | CATG | 6 cut(s) | 496, 884, 986, 1282, 1349, 1451 |
| HspAI | GCGC | 1 cut(s) | 333 |
| KasI | GGCGCC | 1 cut(s) | 332 |
| KroI | GCCGGC | 1 cut(s) | 335 |
| KroNI | GCCGGC | 1 cut(s) | 337 |
| Ksp22I | TGATCA | 3 cut(s) | 222, 1009, 1060 |
| Kzo9I | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| LguI | GCTCTTC | 1 cut(s) | 181 |
| LmnI | GCTCC | 6 cut(s) | 230, 388, 544, 557, 1122, 1447 |
| Lsp1109I | GCAGC | 5 cut(s) | 387, 559, 628, 863, 1137 |
| LweI | GCATC | 3 cut(s) | 209, 661, 867 |
| MaeI | CTAG | 2 cut(s) | 947, 1406 |
| MaeII | ACGT | 1 cut(s) | 915 |
| MaeIII | GTNAC | 2 cut(s) | 590, 938 |
| MalI | GATC | 6 cut(s) | 224, 753, 775, 871, 1011, 1062 |
| MbiI | CCGCTC | 1 cut(s) | 170 |
| MboI | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| MboII | GAAGA | 5 cut(s) | 54, 168, 490, 1172, 1432 |
| MflI | RGATCY | 1 cut(s) | 773 |
| MluCI | AATT | 9 cut(s) | 116, 614, 903, 958, 964, 1133, 1199, 1211, 1426 |
| Mly113I | GGCGCC | 1 cut(s) | 333 |
| MmeI | TCCRAC | 2 cut(s) | 258, 842 |
| Mph1103I | ATGCAT | 1 cut(s) | 882 |
| MroNI | GCCGGC | 1 cut(s) | 335 |
| MroXI | GAANNNNTTC | 3 cut(s) | 74, 1167, 1203 |
| MseI | TTAA | 3 cut(s) | 530, 963, 1425 |
| MslI | CAYNNNNRTG | 2 cut(s) | 845, 1154 |
| MspA1I | CMGCKG | 2 cut(s) | 667, 854 |
| MspI | CCGG | 8 cut(s) | 67, 191, 234, 259, 330, 336, 588, 1050 |
| MspR9I | CCNGG | 5 cut(s) | 67, 259, 814, 1050, 1314 |
| MvaI | CCWGG | 2 cut(s) | 814, 1314 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 332, 388, 680, 1318, 1439 |
| NaeI | GCCGGC | 1 cut(s) | 337 |
| NarI | GGCGCC | 1 cut(s) | 333 |
| NciI | CCSGG | 3 cut(s) | 67, 259, 1050 |
| NcoI | CCATGG | 1 cut(s) | 982 |
| NdeII | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| NgoMIV | GCCGGC | 1 cut(s) | 335 |
| NlaIII | CATG | 6 cut(s) | 496, 884, 986, 1282, 1349, 1451 |
| NlaIV | GGNNCC | 6 cut(s) | 189, 232, 334, 456, 609, 1187 |
| NmuCI | GTSAC | 2 cut(s) | 590, 938 |
| NsiI | ATGCAT | 1 cut(s) | 882 |
| NspI | RCATGY | 2 cut(s) | 496, 1282 |
| OliI | CACNNNNGTG | 1 cut(s) | 1154 |
| PaeI | GCATGC | 1 cut(s) | 496 |
| PciSI | GCTCTTC | 1 cut(s) | 181 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 297 |
| PdiI | GCCGGC | 1 cut(s) | 337 |
| PdmI | GAANNNNTTC | 3 cut(s) | 74, 1167, 1203 |
| PfeI | GAWTC | 3 cut(s) | 70, 659, 896 |
| PflFI | GACNNNGTC | 1 cut(s) | 1069 |
| PfoI | TCCNGGA | 2 cut(s) | 65, 812 |
| PinAI | ACCGGT | 1 cut(s) | 190 |
| PkrI | GCNGC | 7 cut(s) | 92, 377, 549, 643, 853, 1127, 1130 |
| PluTI | GGCGCC | 1 cut(s) | 336 |
| PshBI | ATTAAT | 1 cut(s) | 1425 |
| PsiI | TTATAA | 1 cut(s) | 747 |
| Psp6I | CCWGG | 2 cut(s) | 812, 1312 |
| PspEI | GGTNACC | 1 cut(s) | 938 |
| PspFI | CCCAGC | 4 cut(s) | 391, 560, 663, 1139 |
| PspGI | CCWGG | 2 cut(s) | 812, 1312 |
| PspN4I | GGNNCC | 6 cut(s) | 189, 232, 334, 456, 609, 1187 |
| PspPI | GGNCC | 4 cut(s) | 280, 454, 727, 1186 |
| PsuI | RGATCY | 1 cut(s) | 773 |
| PsyI | GACNNNGTC | 1 cut(s) | 1069 |
| PvuII | CAGCTG | 2 cut(s) | 667, 854 |
| RsaI | GTAC | 2 cut(s) | 578, 909 |
| RsaNI | GTAC | 2 cut(s) | 577, 908 |
| RseI | CAYNNNNRTG | 2 cut(s) | 845, 1154 |
| SapI | GCTCTTC | 1 cut(s) | 181 |
| SaqAI | TTAA | 3 cut(s) | 530, 963, 1425 |
| SatI | GCNGC | 7 cut(s) | 91, 376, 548, 642, 852, 1126, 1129 |
| Sau3AI | GATC | 6 cut(s) | 222, 751, 773, 869, 1009, 1060 |
| Sau96I | GGNCC | 4 cut(s) | 280, 454, 727, 1186 |
| ScaI | AGTACT | 1 cut(s) | 578 |
| ScrFI | CCNGG | 5 cut(s) | 67, 259, 814, 1050, 1314 |
| SfaNI | GCATC | 3 cut(s) | 209, 661, 867 |
| SfcI | CTRYAG | 2 cut(s) | 829, 1020 |
| SfoI | GGCGCC | 1 cut(s) | 334 |
| SinI | GGWCC | 3 cut(s) | 280, 454, 1186 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 845, 1154 |
| SmlI | CTYRAG | 1 cut(s) | 953 |
| SmoI | CTYRAG | 1 cut(s) | 953 |
| SphI | GCATGC | 1 cut(s) | 496 |
| Sse9I | AATT | 9 cut(s) | 116, 614, 903, 958, 964, 1133, 1199, 1211, 1426 |
| SsiI | CCGC | 7 cut(s) | 88, 91, 144, 150, 168, 198, 1129 |
| SspDI | GGCGCC | 1 cut(s) | 332 |
| SspMI | CTAG | 2 cut(s) | 947, 1406 |
| StyD4I | CCNGG | 5 cut(s) | 65, 257, 812, 1048, 1312 |
| StyI | CCWWGG | 2 cut(s) | 340, 982 |
| TaaI | ACNGT | 3 cut(s) | 830, 1024, 1102 |
| TaiI | ACGT | 1 cut(s) | 918 |
| TaqI | TCGA | 4 cut(s) | 125, 213, 300, 1453 |
| TaqII | GACCGA | 1 cut(s) | 1203 |
| TasI | AATT | 9 cut(s) | 116, 614, 903, 958, 964, 1133, 1199, 1211, 1426 |
| TatI | WGTACW | 2 cut(s) | 576, 907 |
| TauI | GCSGC | 2 cut(s) | 93, 1131 |
| TfiI | GAWTC | 3 cut(s) | 70, 659, 896 |
| Tru1I | TTAA | 3 cut(s) | 530, 963, 1425 |
| Tru9I | TTAA | 3 cut(s) | 530, 963, 1425 |
| TscAI | CASTG | 5 cut(s) | 762, 833, 1107, 1156, 1345 |
| TseFI | GTSAC | 2 cut(s) | 590, 938 |
| TseI | GCWGC | 5 cut(s) | 375, 547, 641, 851, 1125 |
| Tsp45I | GTSAC | 2 cut(s) | 590, 938 |
| TspDTI | ATGAA | 3 cut(s) | 126, 708, 1362 |
| TspGWI | ACGGA | 1 cut(s) | 277 |
| TspRI | CASTG | 5 cut(s) | 762, 833, 1107, 1156, 1345 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1069 |
| VpaK11BI | GGWCC | 3 cut(s) | 280, 454, 1186 |
| VspI | ATTAAT | 1 cut(s) | 1425 |
| XapI | RAATTY | 3 cut(s) | 116, 958, 1199 |
| XceI | RCATGY | 2 cut(s) | 496, 1282 |
| XmnI | GAANNNNTTC | 3 cut(s) | 74, 1167, 1203 |
| XspI | CTAG | 2 cut(s) | 947, 1406 |
| ZraI | GACGTC | 1 cut(s) | 916 |
| ZrmI | AGTACT | 1 cut(s) | 578 |
| Zsp2I | ATGCAT | 1 cut(s) | 882 |