FvH4_2g18680

GPI transamidase component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0009321
Physical Location & Seq
Forward (+)
15973474 .. 15982002
8529 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g18680.t1

Sequence Viewer

Length: 1767 bp
ATGGCGGAAATCACCGAACCTCTCATCCCTGCAAATCAAACACCTCCTGACTTCGATCCCGAAACCATGCGCAAAACCAAGCCAGGCCTCAAGCGCCTCATCTTAACCGTCTCAGTCCTTTTCTCCTTCATTCTAGGCGTCCCATTGATATACAAATCCGTGGAAATTTACCGCGCGCCGTTACCTTTCCTCGAAATCGATTCACTCTCAGCTGAAATCGACTCCAATCCGCTCCTATTTCCATGTCGTTTCCTAGCAATCCTCGTCGGCTTCGACTCCGAATCCTCTATCGCCTCTCTGGAATCTTCCATTCTTCACCAAATGACCGAATTGACCCGCCAAACGCCTCAATGCGGCACCTGTAGCCCCAACCACAGCGTCTCAGTTGTCCTGGACCCCGATGATCACCCTCTCCTCGGTGCCGTTGATTTCGACGCCGACGATGAGGCTGTGGATGAGGCTCTAGATGAGGCTCTGGAGGCTGTGTTTCGGGGTGGTTGGGGTTCTGGCGACCGCGGAGAGGTGTATACGGTGGTGGTGGTGAATAGGGGAGGGGACGAGGCTAGAGCCGTGGTGGGGAAGTATAGGAATGCTTGGATTGTTGGTAGGGTTTCGGAGGAGGAGGCGGTGGCCAAGGCGGCGGAGGTGTTTGTTAAAGTGTTTGTGAATGGTGGGAAGGAGGAAGGATTGATTCATGGCGAGTTTATGCCTGTTGGTGCTGATGGAACTCTTGTTCTTTCGTTTAATTTGCTGAATGCGGACCCTCGAGATTGGGTTTATGATTGGGACTTTCAGACAGTAGATGCGACTCTGTTGGCTCCAATAATTGAGGCTATGAAACCTGTAGCAAACATAAGCGTGGAAAGTCAGGTGTTATATCATGTGCCAAAGTCGTCACTGTCTTACTGGGATGATAAGTGGGATAGCTACGTATTTAGTACCAAGGACCTTCCTTTCTTTGTAAATTCGAACGAATGGCACTTGGATACATCCATTGCAGCTGGTGGGAGGTCAAAGATGTTGCACTTTGTGGTATATATACCATCCGCAAAGGAGTGCCCTCTTCTTCTACAGCTTCCAGATGGGCAGATTTCCATGACAAATAGCTTTATATCTCCAATGTGGGGAGGTGTTATTGTGTTGAACCCCCAAACATGCAGAAAGGATTCAGAAAGTAAGCATTCATCTAGGCATACAATTATGCATGAGGATCTGCAGAAGGTTTTTGAAGTTTTCATGGGGCAGTTCCGCCAACTTTTTAGTTTTAGATCTGATAACCTGTATGTTGGGGCTTCAGGCACGTACAACCTTTTACCCAGTGAAAAAGGCTTCACAGTATGGGAGTTGGATGTGCTGTCACGTATGCATACATGCTTCAATCTTCATTCATGTGCCACAACCCTTGGATCCCTTTCCAGATTGGTTCAATCATTACCGAGGATGATTATAAAGGATGAGATTGGAAAGCAGGTGAAGTATTCTCTGGAGGCAGCGAAGTTGGCTCAGACTAATGCCTCTCTCGGTATTTATGATGCTTCTGCTGTGTCTTCTAGGCAAGCGAGGTCTCTAGCTGAGGATGCCTTTTTTCATCCATCGATTATGTCGGTCAGCTACTACTCGTTCGAGCATTGTTTCGCCGTTTATTCGCCTTTCTTTCTGCCAGTTTCGATGCATGTTATATTGGCGGCTCTAAGAGAATGGAGAAGATACAAGAAAGAAAATAAGAAGTACTTAGTATGGAAGGCCAAAATGAAGGATGCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00563 ko01100 map00563 map01100
Pfam Domains
Protein Families
PIG-S

Protein Analysis

589

Amino Acids

65.65

Weight (kDa)

5.29

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIG-S PF10510 38 - 573 1.9e-129 Phosphatidylinositol-glycan biosynthesis class S protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1448
AarI CACCTGC 1 cut(s) 1459
Acc16I TGCGCA 1 cut(s) 71
Acc36I ACCTGC 1 cut(s) 1459
AccB1I GGYRCC 2 cut(s) 356, 419
AccBSI CCGCTC 1 cut(s) 232
AccI GTMKAC 1 cut(s) 527
AccII CGCG 3 cut(s) 174, 176, 516
AclWI GGATC 4 cut(s) 50, 1218, 1401, 1414
AcoI YGGCCR 1 cut(s) 630
AcsI RAATTY 2 cut(s) 165, 964
AcuI CTGAAG 1 cut(s) 1278
AcyI GRCGYC 2 cut(s) 138, 435
AdeI CACNNNGTG 1 cut(s) 1030
AfaI GTAC 3 cut(s) 940, 1304, 1730
AfiI CCNNNNNNNGG 5 cut(s) 353, 416, 520, 576, 1124
AgsI TTSAA 4 cut(s) 1144, 1229, 1378, 1427
AjnI CCWGG 2 cut(s) 82, 390
AloI GAACNNNNNNTCC 4 cut(s) 9, 41, 717, 749
AluBI AGCT 7 cut(s) 212, 927, 1001, 1075, 1107, 1571, 1611
AluI AGCT 7 cut(s) 212, 927, 1001, 1075, 1107, 1571, 1611
Alw26I GTCTC 3 cut(s) 115, 385, 1569
AlwI GGATC 4 cut(s) 50, 1218, 1401, 1414
Ama87I CYCGRG 1 cut(s) 765
AoxI GGCC 3 cut(s) 85, 630, 1743
ApeKI GCWGC 2 cut(s) 998, 1490
ApoI RAATTY 2 cut(s) 165, 964
Asp700I GAANNNNTTC 1 cut(s) 1165
AspLEI GCGC 4 cut(s) 72, 96, 176, 178
AspS9I GGNCC 3 cut(s) 394, 760, 946
AsuHPI GGTGA 5 cut(s) 4, 308, 398, 553, 1483
AsuII TTCGAA 1 cut(s) 968
AvaI CYCGRG 1 cut(s) 765
AvaII GGWCC 3 cut(s) 394, 760, 946
BaeGI GKGCMC 1 cut(s) 1061
BalI TGGCCA 1 cut(s) 632
BamHI GGATCC 1 cut(s) 1406
BanI GGYRCC 2 cut(s) 356, 419
BbsI GAAGAC 1 cut(s) 1539
BbvCI CCTCAGC 1 cut(s) 1572
BbvI GCAGC 2 cut(s) 1010, 1502
BccI CCATC 4 cut(s) 716, 1051, 1076, 1600
BceAI ACGGC 4 cut(s) 163, 407, 554, 1622
BciT130I CCWGG 2 cut(s) 84, 392
BciVI GTATCC 1 cut(s) 979
BclI TGATCA 1 cut(s) 403
BcoDI GTCTC 3 cut(s) 115, 385, 1569
BfaI CTAG 7 cut(s) 134, 254, 464, 564, 1188, 1551, 1568
BfmI CTRYAG 4 cut(s) 361, 843, 1070, 1214
BfoI RGCGCY 1 cut(s) 97
BfuAI ACCTGC 1 cut(s) 1459
BfuI GTATCC 1 cut(s) 979
BglI GCCNNNNNGGC 1 cut(s) 638
BglII AGATCT 1 cut(s) 1268
BisI GCNGC 5 cut(s) 355, 639, 999, 1491, 1686
BlsI GCNGC 5 cut(s) 356, 640, 1000, 1492, 1687
BmcAI AGTACT 1 cut(s) 1730
Bme1390I CCNGG 2 cut(s) 84, 392
Bme18I GGWCC 3 cut(s) 394, 760, 946
BmeT110I CYCGRG 1 cut(s) 765
BmgT120I GGNCC 3 cut(s) 394, 760, 946
BmiI GGNNCC 6 cut(s) 358, 396, 421, 762, 819, 1408
BmrFI CCNGG 2 cut(s) 84, 392
BmrI ACTGGG 2 cut(s) 916, 1311
BmsI GCATC 5 cut(s) 793, 1522, 1567, 1659, 1747
BmuI ACTGGG 2 cut(s) 916, 1311
BpiI GAAGAC 1 cut(s) 1539
BpmI CTGGAG 2 cut(s) 497, 1505
Bpu10I CCTNAGC 1 cut(s) 1572
Bpu14I TTCGAA 1 cut(s) 968
BpuEI CTTGAG 1 cut(s) 74
Bsa29I ATCGAT 2 cut(s) 198, 1595
BsaAI YACGTR 3 cut(s) 931, 1302, 1361
BsaHI GRCGYC 2 cut(s) 138, 435
BsaI GGTCTC 1 cut(s) 1569
BsaJI CCNNGG 8 cut(s) 159, 415, 514, 570, 633, 942, 1402, 1436
BsaXI ACNNNNNCTCC 2 cut(s) 470, 500
Bsc4I CCNNNNNNNGG 5 cut(s) 353, 416, 520, 576, 1124
Bse1I ACTGG 3 cut(s) 911, 1317, 1661
Bse3DI GCAATG 1 cut(s) 993
BseBI CCWGG 2 cut(s) 84, 392
BseCI ATCGAT 2 cut(s) 198, 1595
BseDI CCNNGG 8 cut(s) 159, 415, 514, 570, 633, 942, 1402, 1436
BseLI CCNNNNNNNGG 5 cut(s) 353, 416, 520, 576, 1124
BseMI GCAATG 1 cut(s) 993
BseMII CTCAG 5 cut(s) 126, 222, 396, 1517, 1563
BseNI ACTGG 3 cut(s) 911, 1317, 1661
BsePI GCGCGC 1 cut(s) 174
BseRI GAGGAG 3 cut(s) 404, 632, 635
BseSI GKGCMC 1 cut(s) 1061
BseXI GCAGC 2 cut(s) 1010, 1502
Bsh1236I CGCG 3 cut(s) 174, 176, 516
Bsh1285I CGRYCG 1 cut(s) 514
BshFI GGCC 3 cut(s) 87, 632, 1745
BshNI GGYRCC 2 cut(s) 356, 419
BshVI ATCGAT 2 cut(s) 198, 1595
BsiEI CGRYCG 1 cut(s) 514
BsiHKCI CYCGRG 1 cut(s) 765
BslFI GGGAC 3 cut(s) 125, 569, 800
BslI CCNNNNNNNGG 5 cut(s) 353, 416, 520, 576, 1124
BsmAI GTCTC 3 cut(s) 115, 385, 1569
BsmBI CGTCTC 2 cut(s) 115, 385
BsmFI GGGAC 3 cut(s) 125, 569, 800
BsmI GAATGC 3 cut(s) 595, 760, 1180
BsnI GGCC 3 cut(s) 87, 632, 1745
Bso31I GGTCTC 1 cut(s) 1569
BsoBI CYCGRG 1 cut(s) 765
Bsp119I TTCGAA 1 cut(s) 968
Bsp1286I GDGCHC 1 cut(s) 1061
Bsp143I GATC 5 cut(s) 55, 403, 1210, 1268, 1406
BspANI GGCC 3 cut(s) 87, 632, 1745
BspCNI CTCAG 5 cut(s) 125, 221, 395, 1516, 1564
BspDI ATCGAT 2 cut(s) 198, 1595
BspFNI CGCG 3 cut(s) 174, 176, 516
BspLI GGNNCC 6 cut(s) 358, 396, 421, 762, 819, 1408
BspMAI CTGCAG 1 cut(s) 1218
BspMI ACCTGC 1 cut(s) 1459
BspPI GGATC 4 cut(s) 50, 1218, 1401, 1414
BspT104I TTCGAA 1 cut(s) 968
BspT107I GGYRCC 2 cut(s) 356, 419
BspTNI GGTCTC 1 cut(s) 1569
BsrBI CCGCTC 1 cut(s) 232
BsrDI GCAATG 1 cut(s) 993
BsrI ACTGG 3 cut(s) 911, 1317, 1661
BssECI CCNNGG 8 cut(s) 159, 415, 514, 570, 633, 942, 1402, 1436
BssHII GCGCGC 1 cut(s) 174
BssMI GATC 5 cut(s) 55, 403, 1210, 1268, 1406
BssNAI GTATAC 1 cut(s) 528
BssNI GRCGYC 2 cut(s) 138, 435
BssT1I CCWWGG 3 cut(s) 633, 942, 1402
Bst1107I GTATAC 1 cut(s) 528
Bst2UI CCWGG 2 cut(s) 84, 392
Bst4CI ACNGT 5 cut(s) 109, 532, 799, 900, 1336
Bst6I CTCTTC 1 cut(s) 1068
BstACI GRCGYC 2 cut(s) 138, 435
BstBAI YACGTR 3 cut(s) 931, 1302, 1361
BstBI TTCGAA 1 cut(s) 968
BstC8I GCNNGC 2 cut(s) 176, 1557
BstDEI CTNAG 7 cut(s) 112, 208, 382, 1503, 1572, 1691, 1732
BstDSI CCRYGG 3 cut(s) 159, 514, 570
BstFNI CGCG 3 cut(s) 174, 176, 516
BstH2I RGCGCY 1 cut(s) 97
BstHHI GCGC 4 cut(s) 72, 96, 176, 178
BstKTI GATC 5 cut(s) 58, 406, 1213, 1271, 1409
BstMAI GTCTC 3 cut(s) 115, 385, 1569
BstMBI GATC 5 cut(s) 55, 403, 1210, 1268, 1406
BstMCI CGRYCG 1 cut(s) 514
BstMWI GCNNNNNNNGC 6 cut(s) 93, 363, 479, 638, 1499, 1577
BstNI CCWGG 2 cut(s) 84, 392
BstNSI RCATGY 3 cut(s) 1158, 1374, 1676
BstSCI CCNGG 2 cut(s) 82, 390
BstSFI CTRYAG 4 cut(s) 361, 843, 1070, 1214
BstSLI GKGCMC 1 cut(s) 1061
BstSNI TACGTA 1 cut(s) 931
BstUI CGCG 3 cut(s) 174, 176, 516
BstV1I GCAGC 2 cut(s) 1010, 1502
BstV2I GAAGAC 1 cut(s) 1539
BstX2I RGATCY 3 cut(s) 1210, 1268, 1406
BstYI RGATCY 3 cut(s) 1210, 1268, 1406
BstZ17I GTATAC 1 cut(s) 528
Bsu15I ATCGAT 2 cut(s) 198, 1595
BsuI GTATCC 1 cut(s) 979
BsuRI GGCC 3 cut(s) 87, 632, 1745
BsuTUI ATCGAT 2 cut(s) 198, 1595
BtgI CCRYGG 3 cut(s) 159, 514, 570
BtsIMutI CAGTG 2 cut(s) 896, 1324
BveI ACCTGC 1 cut(s) 1459
Cac8I GCNNGC 2 cut(s) 176, 1557
CfoI GCGC 4 cut(s) 72, 96, 176, 178
Cfr13I GGNCC 3 cut(s) 394, 760, 946
Cfr42I CCGCGG 1 cut(s) 517
ClaI ATCGAT 2 cut(s) 198, 1595
CseI GACGC 3 cut(s) 127, 367, 443
Csp6I GTAC 3 cut(s) 939, 1303, 1729
CspCI CAANNNNNGTGG 2 cut(s) 1384, 1419
CviQI GTAC 3 cut(s) 939, 1303, 1729
DdeI CTNAG 7 cut(s) 112, 208, 382, 1503, 1572, 1691, 1732
DpnI GATC 5 cut(s) 57, 405, 1212, 1270, 1408
DpnII GATC 5 cut(s) 55, 403, 1210, 1268, 1406
DraIII CACNNNGTG 1 cut(s) 1030
EaeI YGGCCR 1 cut(s) 630
Eam1104I CTCTTC 1 cut(s) 1068
EarI CTCTTC 1 cut(s) 1068
EciI GGCGGA 3 cut(s) 20, 656, 1238
Eco105I TACGTA 1 cut(s) 931
Eco130I CCWWGG 3 cut(s) 633, 942, 1402
Eco147I AGGCCT 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 1569
Eco47I GGWCC 3 cut(s) 394, 760, 946
Eco57I CTGAAG 1 cut(s) 1278
Eco88I CYCGRG 1 cut(s) 765
EcoO109I RGGNCCY 1 cut(s) 946
EcoRII CCWGG 2 cut(s) 82, 390
EcoT14I CCWWGG 3 cut(s) 633, 942, 1402
EcoT22I ATGCAT 4 cut(s) 1206, 1368, 1674, 1762
ErhI CCWWGG 3 cut(s) 633, 942, 1402
Esp3I CGTCTC 2 cut(s) 115, 385
FalI AAGNNNNNCTT 2 cut(s) 1715, 1747
FaqI GGGAC 3 cut(s) 125, 569, 800
FauI CCCGC 1 cut(s) 344
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 1 cut(s) 527
Fnu4HI GCNGC 5 cut(s) 355, 639, 999, 1491, 1686
Fsp4HI GCNGC 5 cut(s) 355, 639, 999, 1491, 1686
FspBI CTAG 7 cut(s) 134, 254, 464, 564, 1188, 1551, 1568
FspI TGCGCA 1 cut(s) 71
GlaI GCGC 4 cut(s) 71, 95, 175, 177
GluI GCNGC 5 cut(s) 355, 639, 999, 1491, 1686
GsuI CTGGAG 2 cut(s) 497, 1505
HaeII RGCGCY 1 cut(s) 97
HaeIII GGCC 3 cut(s) 87, 632, 1745
HgaI GACGC 3 cut(s) 127, 367, 443
HhaI GCGC 4 cut(s) 72, 96, 176, 178
Hin1I GRCGYC 2 cut(s) 138, 435
Hin6I GCGC 4 cut(s) 70, 94, 174, 176
HinP1I GCGC 4 cut(s) 70, 94, 174, 176
HinfI GANTC 8 cut(s) 200, 221, 275, 281, 302, 691, 808, 1166
HphI GGTGA 5 cut(s) 4, 308, 398, 553, 1483
Hpy166II GTNNAC 1 cut(s) 528
Hpy188I TCNGA 6 cut(s) 280, 616, 795, 1171, 1273, 1506
Hpy188III TCNNGA 9 cut(s) 47, 59, 299, 464, 476, 767, 1079, 1416, 1484
Hpy8I GTNNAC 1 cut(s) 528
Hpy99I CGWCG 3 cut(s) 269, 437, 443
HpyAV CCTTC 7 cut(s) 136, 670, 677, 959, 1213, 1735, 1747
HpyCH4III ACNGT 5 cut(s) 109, 532, 799, 900, 1336
HpyCH4IV ACGT 3 cut(s) 930, 1301, 1360
HpyCH4V TGCA 9 cut(s) 32, 998, 1024, 1158, 1204, 1216, 1366, 1672, 1760
HpyF10VI GCNNNNNNNGC 6 cut(s) 93, 363, 479, 638, 1499, 1577
HpyF3I CTNAG 7 cut(s) 112, 208, 382, 1503, 1572, 1691, 1732
HpySE526I ACGT 3 cut(s) 930, 1301, 1360
Hsp92I GRCGYC 2 cut(s) 138, 435
HspAI GCGC 4 cut(s) 70, 94, 174, 176
Ksp22I TGATCA 1 cut(s) 403
KspI CCGCGG 1 cut(s) 517
Kzo9I GATC 5 cut(s) 55, 403, 1210, 1268, 1406
LmnI GCTCC 2 cut(s) 237, 823
Lsp1109I GCAGC 2 cut(s) 1010, 1502
LweI GCATC 5 cut(s) 793, 1522, 1567, 1659, 1747
MaeI CTAG 7 cut(s) 134, 254, 464, 564, 1188, 1551, 1568
MaeII ACGT 3 cut(s) 930, 1301, 1360
MaeIII GTNAC 3 cut(s) 180, 894, 1356
MalI GATC 5 cut(s) 57, 405, 1212, 1270, 1408
MbiI CCGCTC 1 cut(s) 232
MboI GATC 5 cut(s) 55, 403, 1210, 1268, 1406
MboII GAAGA 7 cut(s) 297, 305, 1055, 1058, 1373, 1539, 1716
MflI RGATCY 3 cut(s) 1210, 1268, 1406
MhlI GDGCHC 1 cut(s) 1061
MlsI TGGCCA 1 cut(s) 632
MluCI AATT 6 cut(s) 165, 329, 745, 825, 964, 1197
MluNI TGGCCA 1 cut(s) 632
MlyI GAGTC 3 cut(s) 215, 269, 802
MmeI TCCRAC 1 cut(s) 1326
Mox20I TGGCCA 1 cut(s) 632
Mph1103I ATGCAT 4 cut(s) 1206, 1368, 1674, 1762
MroXI GAANNNNTTC 1 cut(s) 1165
MscI TGGCCA 1 cut(s) 632
MseI TTAA 4 cut(s) 104, 654, 744, 1765
MslI CAYNNNNRTG 2 cut(s) 857, 1389
Msp20I TGGCCA 1 cut(s) 632
MspA1I CMGCKG 3 cut(s) 212, 516, 1001
MspR9I CCNGG 2 cut(s) 84, 392
Mva1269I GAATGC 3 cut(s) 595, 760, 1180
MvaI CCWGG 2 cut(s) 84, 392
MvnI CGCG 3 cut(s) 174, 176, 516
MwoI GCNNNNNNNGC 6 cut(s) 93, 363, 479, 638, 1499, 1577
NdeII GATC 5 cut(s) 55, 403, 1210, 1268, 1406
NlaIV GGNNCC 6 cut(s) 358, 396, 421, 762, 819, 1408
NmuCI GTSAC 2 cut(s) 894, 1356
NsbI TGCGCA 1 cut(s) 71
NsiI ATGCAT 4 cut(s) 1206, 1368, 1674, 1762
NspI RCATGY 3 cut(s) 1158, 1374, 1676
NspV TTCGAA 1 cut(s) 968
PaeR7I CTCGAG 1 cut(s) 765
PaqCI CACCTGC 1 cut(s) 1459
PauI GCGCGC 1 cut(s) 174
PceI AGGCCT 1 cut(s) 87
PcsI WCGNNNNNNNCGW 2 cut(s) 270, 438
PctI GAATGC 3 cut(s) 595, 760, 1180
PdmI GAANNNNTTC 1 cut(s) 1165
PfeI GAWTC 5 cut(s) 200, 281, 302, 691, 1166
PfoI TCCNGGA 1 cut(s) 390
PkrI GCNGC 5 cut(s) 356, 640, 1000, 1492, 1687
PleI GAGTC 3 cut(s) 215, 269, 802
PpsI GAGTC 3 cut(s) 215, 269, 802
Ppu21I YACGTR 3 cut(s) 931, 1302, 1361
PpuMI RGGWCCY 1 cut(s) 946
PsiI TTATAA 1 cut(s) 1448
Psp5II RGGWCCY 1 cut(s) 946
Psp6I CCWGG 2 cut(s) 82, 390
PspGI CCWGG 2 cut(s) 82, 390
PspN4I GGNNCC 6 cut(s) 358, 396, 421, 762, 819, 1408
PspPI GGNCC 3 cut(s) 394, 760, 946
PspPPI RGGWCCY 1 cut(s) 946
PstI CTGCAG 1 cut(s) 1218
PsuI RGATCY 3 cut(s) 1210, 1268, 1406
PteI GCGCGC 1 cut(s) 174
PvuII CAGCTG 2 cut(s) 212, 1001
RsaI GTAC 3 cut(s) 940, 1304, 1730
RsaNI GTAC 3 cut(s) 939, 1303, 1729
RseI CAYNNNNRTG 2 cut(s) 857, 1389
SacII CCGCGG 1 cut(s) 517
SaqAI TTAA 4 cut(s) 104, 654, 744, 1765
SatI GCNGC 5 cut(s) 355, 639, 999, 1491, 1686
Sau3AI GATC 5 cut(s) 55, 403, 1210, 1268, 1406
Sau96I GGNCC 3 cut(s) 394, 760, 946
ScaI AGTACT 1 cut(s) 1730
SchI GAGTC 3 cut(s) 215, 269, 802
ScrFI CCNGG 2 cut(s) 84, 392
SduI GDGCHC 1 cut(s) 1061
SfaNI GCATC 5 cut(s) 793, 1522, 1567, 1659, 1747
SfcI CTRYAG 4 cut(s) 361, 843, 1070, 1214
Sfr274I CTCGAG 1 cut(s) 765
Sfr303I CCGCGG 1 cut(s) 517
SfuI TTCGAA 1 cut(s) 968
SgrBI CCGCGG 1 cut(s) 517
SinI GGWCC 3 cut(s) 394, 760, 946
SlaI CTCGAG 1 cut(s) 765
SmiMI CAYNNNNRTG 2 cut(s) 857, 1389
SmlI CTYRAG 2 cut(s) 89, 765
SmoI CTYRAG 2 cut(s) 89, 765
SnaBI TACGTA 1 cut(s) 931
Sse9I AATT 6 cut(s) 165, 329, 745, 825, 964, 1197
SseBI AGGCCT 1 cut(s) 87
SspMI CTAG 7 cut(s) 134, 254, 464, 564, 1188, 1551, 1568
StuI AGGCCT 1 cut(s) 87
StyD4I CCNGG 2 cut(s) 82, 390
StyI CCWWGG 3 cut(s) 633, 942, 1402
TaaI ACNGT 5 cut(s) 109, 532, 799, 900, 1336
TaiI ACGT 3 cut(s) 933, 1304, 1363
TaqII GACCGA 2 cut(s) 341, 1594
TasI AATT 6 cut(s) 165, 329, 745, 825, 964, 1197
TatI WGTACW 1 cut(s) 1728
TauI GCSGC 3 cut(s) 357, 641, 1688
TfiI GAWTC 5 cut(s) 200, 281, 302, 691, 1166
Tru1I TTAA 4 cut(s) 104, 654, 744, 1765
Tru9I TTAA 4 cut(s) 104, 654, 744, 1765
TscAI CASTG 2 cut(s) 903, 1324
TseFI GTSAC 2 cut(s) 894, 1356
TseI GCWGC 2 cut(s) 998, 1490
Tsp45I GTSAC 2 cut(s) 894, 1356
TspDTI ATGAA 9 cut(s) 118, 683, 851, 1173, 1225, 1373, 1377, 1577, 1766
TspGWI ACGGA 1 cut(s) 148
TspRI CASTG 2 cut(s) 903, 1324
VpaK11BI GGWCC 3 cut(s) 394, 760, 946
XapI RAATTY 2 cut(s) 165, 964
XbaI TCTAGA 1 cut(s) 463
XceI RCATGY 3 cut(s) 1158, 1374, 1676
XhoI CTCGAG 1 cut(s) 765
XmiI GTMKAC 1 cut(s) 527
XmnI GAANNNNTTC 1 cut(s) 1165
XspI CTAG 7 cut(s) 134, 254, 464, 564, 1188, 1551, 1568
ZrmI AGTACT 1 cut(s) 1730
Zsp2I ATGCAT 4 cut(s) 1206, 1368, 1674, 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.