FvH4_2g22590

Histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0012235
Physical Location & Seq
Reverse (-)
18515161 .. 18521277
6117 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g22590.t4

Sequence Viewer

Length: 1647 bp
ATGGACACGCACTCTTCTCACCTCGCCGTGTCCAACCGTTCCCGGAGCTCACAGTCCCCTTCGCCGTCCCACTCGGCCTCCGCCTCCGCCACCTCCTCCATCCACAAGCGCAAGCTCGCGTCTGAGGACCACGCGCCTCCCTTCCCTCCCTCCTCCTTCTCCGCAGACACTCGCGACGGCGCCCTCACCTCCAACGACGACCTCGAGAGCATCTCCGCCCGCTGCGGCGGCGCCGACTCCGACTCCGACGATGAGTCCGAGGCCCTGGGCGACGACGACGAGGACTTCGACCACGACTCCTCCATGCGAAACTTCACCGCGGCGCGCCTCGACAACAGCGGCGGTTCCGCCGCGGCCTCGGCGCGCAATTCGAAGCTCAAGACGGAGAATTTGACCGTTAAGATTGAGAATTCGGATGGTGGAGTTAAGGACGGCGGCGGGAATGCCGGGACCGGCGCGGTGGGGCCTACTTCGTCGGTGCCGGGAATAATGGTGAAGGAGGACGCAACTAAAATATTCACAGAGAATATACAAACCAGTGGAGCTTATAGCGCTAGAGAAGAGCTATTGAAAAGAGAGGAGGAAGCGGGGAGGCTCAAGTTTGCAACGCTTTCGAATGATGGTGTAGATGAGCATATGATCTGGTTGGTAGGATTGAAGAACATATTTGCCAGGCAACTACCAAACATGCCCAAGGAGTACATTGTTCGACTGGTTATGGATAGGAGCCATAAGTCGGTTATGGTTATCAGACGTAATCATGTTGTTGGTGGCATAACTTATCGACCATATGTCAGCCAAAGGTTCGGAGAGATAGCTTTTTGCGCAATCACAGCTGATGAACAAGTAAAAGGTTATGGCACCAGACTTATGAATCACTTAAAACAGCATGCACGGGATGTTGATGGGCTAACCCATTTCCTGACATATGCTGACAATAATGCTGTTGGCTATTTTATTAAACAGGGTTTTACGAAAGAGATCTACTTGGAGAAGGACAGATGGCATGGCTATATAAAGGATTATGATGGAGGAATCCTAATGGAATGCAAAATAGACCCAAAACTTCCATATACTGATTTATCAACTATGATTCGTCGTCAAAGGCAGGCAATTGATGAAAAGATAAGAGAGCTCTCAAATTGTCATATTGTTTATCCTGGCATTGATTTCCAAAAGAAAGAAGCTGGTATTCCTAAAAAGCTCATCAAGGTCGAGGACATCCCTGGCTTAAGGGAGGCCGGGTGGACCCCTGATCAATGGGGCCATTCACGTTTTGGAGCATTGACAGCTTCCACAGAGAATGCCAAAAAGCATTTGACTGCTTTCATGCGTGCACTTCTAAAGTCTATGCATGACCATGTTGATGCGTGGCCATTCAAGGAACCAGTCGATGCACGTGATGTTCCTGATTATTATGACATTATCAAAGATCCTATGGATCTAAAGACAATGTCAAAGAGGGTAGAGTCAGAGCAGTATTATGTAACATTTGAGATGTTTGTTGCGGATGCCAAGAGGATGTTCGCAAATGCATGCACTTATAATTCTCCTGATACTATTTATTACAAGTGTGCAAGAAGGCTGGCATCTCACTTTGAAAGCAAAGTGCAATCAGGTCTCCAAGCTGGTGCCAAAATACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000123 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010015 GO:0010321 GO:0010468 GO:0010484 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0061733 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04330 ko04919 ko05166 ko05203 map04330 map04919 map05166 map05203
Pfam Domains
Protein Families
Acetyltransf_1 Bromodomain

Protein Analysis

549

Amino Acids

60.96

Weight (kDa)

6.27

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 241 - 324 3.2e-11 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 246 - 325 3.8e-06 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012235)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54610
fragaria_vesca FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590
malus_domestica MD10G1193500.v1.1
prunus_persica Prupe.8G232900_v2.0.a1
pyrus_communis pycom10g16730
rosa_chinensis RchiOBHm_Chr6g0289651
rosa_laevigata RLG00000012285
rosa_multiflora Rmu_sc0005376.1_g000013
rosa_roxburghii Rroxscaffold_7G00177770
rosa_rugosa Rorug06G0205300 Rorug06G0205400
rosa_samantha Rh6BG323600 Rh6CG330200 Rh6DG315400
rosa_wichuraiana Rw6G027340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1545
Acc16I TGCGCA 1 cut(s) 826
AccB1I GGYRCC 5 cut(s) 179, 230, 478, 860, 1631
AccII CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
AclWI GGATC 2 cut(s) 1427, 1449
AcoI YGGCCR 1 cut(s) 1373
AcsI RAATTY 2 cut(s) 388, 409
AcvI CACGTG 1 cut(s) 1400
AcyI GRCGYC 2 cut(s) 180, 231
AfaI GTAC 1 cut(s) 701
AfeI AGCGCT 1 cut(s) 553
AfiI CCNNNNNNNGG 1 cut(s) 736
AflII CTTAAG 1 cut(s) 1231
AgsI TTSAA 4 cut(s) 571, 658, 1381, 1601
AhdI GACNNNNNGTC 2 cut(s) 253, 791
AjnI CCWGG 4 cut(s) 264, 671, 1159, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 1508, 1540
Alw21I GWGCWC 3 cut(s) 50, 1137, 1339
Alw26I GTCTC 1 cut(s) 1625
Alw44I GTGCAC 1 cut(s) 1335
AlwI GGATC 2 cut(s) 1427, 1449
Ama87I CYCGRG 1 cut(s) 203
Aor51HI AGCGCT 1 cut(s) 553
AoxI GGCC 7 cut(s) 75, 261, 354, 464, 1239, 1264, 1373
ApaLI GTGCAC 1 cut(s) 1335
ApeKI GCWGC 1 cut(s) 222
ApoI RAATTY 2 cut(s) 388, 409
ArsI GACNNNNNNTTYG 4 cut(s) 269, 301, 373, 405
AscI GGCGCGCC 1 cut(s) 323
AspS9I GGNCC 6 cut(s) 127, 262, 450, 464, 1248, 1264
AsuC2I CCSGG 4 cut(s) 43, 448, 483, 1243
AsuHPI GGTGA 4 cut(s) 11, 178, 307, 505
AsuII TTCGAA 2 cut(s) 371, 614
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 3 cut(s) 127, 450, 1248
BaeGI GKGCMC 1 cut(s) 1339
BalI TGGCCA 1 cut(s) 1375
BanI GGYRCC 5 cut(s) 179, 230, 478, 860, 1631
BanII GRGCYC 2 cut(s) 50, 1137
BbrPI CACGTG 1 cut(s) 1400
Bbv12I GWGCWC 3 cut(s) 50, 1137, 1339
BbvI GCAGC 1 cut(s) 209
BccI CCATC 6 cut(s) 107, 410, 614, 899, 996, 1022
BceAI ACGGC 4 cut(s) 11, 49, 193, 448
BcgI CGANNNNNNTGC 2 cut(s) 594, 628
BciT130I CCWGG 4 cut(s) 266, 673, 1161, 1227
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 4 cut(s) 43, 448, 483, 1243
BcoDI GTCTC 1 cut(s) 1625
BfaI CTAG 1 cut(s) 555
BfoI RGCGCY 3 cut(s) 183, 234, 555
BfrI CTTAAG 1 cut(s) 1231
BglII AGATCT 1 cut(s) 981
BisI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 351, 354, 436
BlsI GCNGC 8 cut(s) 224, 227, 230, 322, 341, 352, 355, 437
Bme1390I CCNGG 8 cut(s) 43, 266, 448, 483, 673, 1161, 1227, 1243
Bme18I GGWCC 3 cut(s) 127, 450, 1248
BmeRI GACNNNNNGTC 2 cut(s) 253, 791
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 6 cut(s) 127, 262, 450, 464, 1248, 1264
BmrFI CCNGG 8 cut(s) 43, 266, 448, 483, 673, 1161, 1227, 1243
BmsI GCATC 5 cut(s) 219, 1357, 1384, 1501, 1598
BplI GAGNNNNNCTC 2 cut(s) 197, 229
Bpu14I TTCGAA 2 cut(s) 371, 614
BpuEI CTTGAG 2 cut(s) 362, 581
BpuMI CCSGG 4 cut(s) 43, 448, 483, 1243
BsaAI YACGTR 1 cut(s) 1400
BsaHI GRCGYC 2 cut(s) 180, 231
BsaI GGTCTC 1 cut(s) 1625
BsaJI CCNNGG 8 cut(s) 258, 264, 265, 318, 351, 357, 693, 1225
Bsc4I CCNNNNNNNGG 1 cut(s) 736
Bse118I RCCGGY 1 cut(s) 452
Bse1I ACTGG 3 cut(s) 537, 717, 1388
BseBI CCWGG 4 cut(s) 266, 673, 1161, 1227
BseDI CCNNGG 8 cut(s) 258, 264, 265, 318, 351, 357, 693, 1225
BseGI GGATG 6 cut(s) 99, 421, 904, 1221, 1516, 1527
BseLI CCNNNNNNNGG 1 cut(s) 736
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 3 cut(s) 537, 717, 1388
BsePI GCGCGC 2 cut(s) 323, 362
BseRI GAGGAG 4 cut(s) 85, 142, 289, 593
BseSI GKGCMC 1 cut(s) 1339
BseXI GCAGC 1 cut(s) 209
Bsh1236I CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
BshFI GGCC 7 cut(s) 77, 263, 356, 466, 1241, 1266, 1375
BshNI GGYRCC 5 cut(s) 179, 230, 478, 860, 1631
BsiHKAI GWGCWC 3 cut(s) 50, 1137, 1339
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 5 cut(s) 43, 447, 453, 482, 1242
BslFI GGGAC 3 cut(s) 40, 52, 463
BslI CCNNNNNNNGG 1 cut(s) 736
BsmAI GTCTC 1 cut(s) 1625
BsmFI GGGAC 3 cut(s) 40, 52, 463
BsmI GAATGC 3 cut(s) 448, 1052, 1309
BsnI GGCC 7 cut(s) 77, 263, 356, 466, 1241, 1266, 1375
Bso31I GGTCTC 1 cut(s) 1625
BsoBI CYCGRG 1 cut(s) 203
Bsp119I TTCGAA 2 cut(s) 371, 614
Bsp1286I GDGCHC 3 cut(s) 50, 1137, 1339
Bsp143I GATC 5 cut(s) 639, 981, 1255, 1432, 1441
Bsp68I TCGCGA 1 cut(s) 174
BspANI GGCC 7 cut(s) 77, 263, 356, 466, 1241, 1266, 1375
BspCNI CTCAG 1 cut(s) 115
BspFNI CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
BspPI GGATC 2 cut(s) 1427, 1449
BspQI GCTCTTC 1 cut(s) 555
BspT104I TTCGAA 2 cut(s) 371, 614
BspT107I GGYRCC 5 cut(s) 179, 230, 478, 860, 1631
BspTI CTTAAG 1 cut(s) 1231
BspTNI GGTCTC 1 cut(s) 1625
BsrFI RCCGGY 1 cut(s) 452
BsrI ACTGG 3 cut(s) 537, 717, 1388
BssAI RCCGGY 1 cut(s) 452
BssECI CCNNGG 8 cut(s) 258, 264, 265, 318, 351, 357, 693, 1225
BssHII GCGCGC 2 cut(s) 323, 362
BssMI GATC 5 cut(s) 639, 981, 1255, 1432, 1441
BssNI GRCGYC 2 cut(s) 180, 231
BssT1I CCWWGG 1 cut(s) 693
Bst2UI CCWGG 4 cut(s) 266, 673, 1161, 1227
Bst4CI ACNGT 4 cut(s) 38, 54, 397, 1644
Bst6I CTCTTC 2 cut(s) 19, 555
BstACI GRCGYC 2 cut(s) 180, 231
BstAFI CTTAAG 1 cut(s) 1231
BstBAI YACGTR 1 cut(s) 1400
BstBI TTCGAA 2 cut(s) 371, 614
BstDEI CTNAG 1 cut(s) 123
BstDSI CCRYGG 2 cut(s) 318, 351
BstF5I GGATG 6 cut(s) 99, 421, 904, 1221, 1516, 1527
BstFNI CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
BstH2I RGCGCY 3 cut(s) 183, 234, 555
BstKTI GATC 5 cut(s) 642, 984, 1258, 1435, 1444
BstMAI GTCTC 1 cut(s) 1625
BstMBI GATC 5 cut(s) 639, 981, 1255, 1432, 1441
BstMWI GCNNNNNNNGC 6 cut(s) 228, 359, 551, 824, 833, 1289
BstNI CCWGG 4 cut(s) 266, 673, 1161, 1227
BstNSI RCATGY 3 cut(s) 691, 893, 1539
BstSCI CCNGG 8 cut(s) 41, 264, 446, 481, 671, 1159, 1225, 1241
BstSLI GKGCMC 1 cut(s) 1339
BstUI CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
BstV1I GCAGC 1 cut(s) 209
BstX2I RGATCY 3 cut(s) 981, 1432, 1441
BstYI RGATCY 3 cut(s) 981, 1432, 1441
BsuRI GGCC 7 cut(s) 77, 263, 356, 466, 1241, 1266, 1375
BtgI CCRYGG 2 cut(s) 318, 351
BtsCI GGATG 6 cut(s) 99, 421, 904, 1221, 1516, 1527
BtsIMutI CAGTG 1 cut(s) 544
BtuMI TCGCGA 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 452
Cfr13I GGNCC 6 cut(s) 127, 262, 450, 464, 1248, 1264
Cfr42I CCGCGG 2 cut(s) 321, 354
CseI GACGC 2 cut(s) 108, 512
Csp6I GTAC 1 cut(s) 700
CviAII CATG 9 cut(s) 304, 688, 761, 890, 1007, 1330, 1355, 1361, 1536
CviQI GTAC 1 cut(s) 700
DdeI CTNAG 1 cut(s) 123
DinI GGCGCC 2 cut(s) 181, 232
DpnI GATC 5 cut(s) 641, 983, 1257, 1434, 1443
DpnII GATC 5 cut(s) 639, 981, 1255, 1432, 1441
DriI GACNNNNNGTC 2 cut(s) 253, 791
EaeI YGGCCR 1 cut(s) 1373
Eam1104I CTCTTC 2 cut(s) 19, 555
Eam1105I GACNNNNNGTC 2 cut(s) 253, 791
EarI CTCTTC 2 cut(s) 19, 555
EciI GGCGGA 4 cut(s) 70, 76, 205, 337
Ecl136II GAGCTC 2 cut(s) 48, 1135
Eco130I CCWWGG 1 cut(s) 693
Eco24I GRGCYC 2 cut(s) 50, 1137
Eco31I GGTCTC 1 cut(s) 1625
Eco47I GGWCC 3 cut(s) 127, 450, 1248
Eco47III AGCGCT 1 cut(s) 553
Eco53kI GAGCTC 2 cut(s) 48, 1135
Eco72I CACGTG 1 cut(s) 1400
Eco88I CYCGRG 1 cut(s) 203
EcoICRI GAGCTC 2 cut(s) 48, 1135
EcoO109I RGGNCCY 2 cut(s) 262, 464
EcoRI GAATTC 1 cut(s) 409
EcoRII CCWGG 4 cut(s) 264, 671, 1159, 1225
EcoT14I CCWWGG 1 cut(s) 693
EcoT22I ATGCAT 2 cut(s) 1356, 1537
EcoT38I GRGCYC 2 cut(s) 50, 1137
EgeI GGCGCC 2 cut(s) 181, 232
EheI GGCGCC 2 cut(s) 181, 232
ErhI CCWWGG 1 cut(s) 693
FaeI CATG 9 cut(s) 307, 691, 764, 893, 1010, 1333, 1358, 1364, 1539
FaqI GGGAC 3 cut(s) 40, 52, 463
FatI CATG 9 cut(s) 303, 687, 760, 889, 1006, 1329, 1354, 1360, 1535
FauI CCCGC 3 cut(s) 227, 431, 580
FauNDI CATATG 3 cut(s) 636, 790, 928
FbaI TGATCA 1 cut(s) 1255
Fnu4HI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 351, 354, 436
FokI GGATG 6 cut(s) 86, 428, 911, 1208, 1523, 1534
FriOI GRGCYC 2 cut(s) 50, 1137
Fsp4HI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 351, 354, 436
FspBI CTAG 1 cut(s) 555
FspI TGCGCA 1 cut(s) 826
GluI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 351, 354, 436
HaeII RGCGCY 3 cut(s) 183, 234, 555
HaeIII GGCC 7 cut(s) 77, 263, 356, 466, 1241, 1266, 1375
HapII CCGG 5 cut(s) 43, 447, 453, 482, 1242
HgaI GACGC 2 cut(s) 108, 512
Hin1I GRCGYC 2 cut(s) 180, 231
Hin1II CATG 9 cut(s) 307, 691, 764, 893, 1010, 1333, 1358, 1364, 1539
HinfI GANTC 8 cut(s) 236, 242, 254, 296, 874, 1035, 1093, 1469
HpaII CCGG 5 cut(s) 43, 447, 453, 482, 1242
HphI GGTGA 4 cut(s) 11, 178, 307, 505
Hpy166II GTNNAC 2 cut(s) 1248, 1337
Hpy188I TCNGA 8 cut(s) 124, 241, 247, 259, 415, 752, 809, 1474
Hpy188III TCNNGA 6 cut(s) 173, 205, 379, 922, 1409, 1553
Hpy8I GTNNAC 2 cut(s) 1248, 1337
Hpy99I CGWCG 8 cut(s) 179, 200, 251, 275, 278, 281, 478, 1101
HpyAV CCTTC 6 cut(s) 69, 151, 166, 490, 988, 1575
HpyCH4III ACNGT 4 cut(s) 38, 54, 397, 1644
HpyCH4IV ACGT 3 cut(s) 754, 1273, 1399
HpyF10VI GCNNNNNNNGC 6 cut(s) 228, 359, 551, 824, 833, 1289
HpyF3I CTNAG 1 cut(s) 123
HpySE526I ACGT 3 cut(s) 754, 1273, 1399
Hsp92I GRCGYC 2 cut(s) 180, 231
Hsp92II CATG 9 cut(s) 307, 691, 764, 893, 1010, 1333, 1358, 1364, 1539
KasI GGCGCC 2 cut(s) 179, 230
Ksp22I TGATCA 1 cut(s) 1255
KspI CCGCGG 2 cut(s) 321, 354
Kzo9I GATC 5 cut(s) 639, 981, 1255, 1432, 1441
LguI GCTCTTC 1 cut(s) 555
LmnI GCTCC 4 cut(s) 45, 542, 726, 1280
Lsp1109I GCAGC 1 cut(s) 209
LweI GCATC 5 cut(s) 219, 1357, 1384, 1501, 1598
MaeI CTAG 1 cut(s) 555
MaeII ACGT 3 cut(s) 754, 1273, 1399
MaeIII GTNAC 1 cut(s) 1486
MalI GATC 5 cut(s) 641, 983, 1257, 1434, 1443
MboI GATC 5 cut(s) 639, 981, 1255, 1432, 1441
MboII GAAGA 3 cut(s) 6, 572, 670
MfeI CAATTG 1 cut(s) 1113
MflI RGATCY 3 cut(s) 981, 1432, 1441
MhlI GDGCHC 3 cut(s) 50, 1137, 1339
MlsI TGGCCA 1 cut(s) 1375
MluCI AATT 6 cut(s) 367, 388, 409, 1113, 1141, 1546
MluNI TGGCCA 1 cut(s) 1375
Mly113I GGCGCC 2 cut(s) 180, 231
MlyI GAGTC 5 cut(s) 230, 236, 263, 290, 1478
MmeI TCCRAC 4 cut(s) 57, 216, 264, 270
Mox20I TGGCCA 1 cut(s) 1375
Mph1103I ATGCAT 2 cut(s) 1356, 1537
MscI TGGCCA 1 cut(s) 1375
MseI TTAA 5 cut(s) 399, 426, 881, 960, 1232
MslI CAYNNNNRTG 2 cut(s) 1359, 1365
Msp20I TGGCCA 1 cut(s) 1375
MspA1I CMGCKG 5 cut(s) 222, 320, 339, 353, 836
MspCI CTTAAG 1 cut(s) 1231
MspI CCGG 5 cut(s) 43, 447, 453, 482, 1242
MspR9I CCNGG 8 cut(s) 43, 266, 448, 483, 673, 1161, 1227, 1243
MunI CAATTG 1 cut(s) 1113
Mva1269I GAATGC 3 cut(s) 448, 1052, 1309
MvaI CCWGG 4 cut(s) 266, 673, 1161, 1227
MvnI CGCG 8 cut(s) 119, 134, 174, 320, 325, 353, 364, 458
MwoI GCNNNNNNNGC 6 cut(s) 228, 359, 551, 824, 833, 1289
NarI GGCGCC 2 cut(s) 180, 231
NciI CCSGG 4 cut(s) 43, 448, 483, 1243
NdeI CATATG 3 cut(s) 636, 790, 928
NdeII GATC 5 cut(s) 639, 981, 1255, 1432, 1441
NlaIII CATG 9 cut(s) 307, 691, 764, 893, 1010, 1333, 1358, 1364, 1539
NmeAIII GCCGAG 2 cut(s) 53, 338
NruI TCGCGA 1 cut(s) 174
NsbI TGCGCA 1 cut(s) 826
NsiI ATGCAT 2 cut(s) 1356, 1537
NspI RCATGY 3 cut(s) 691, 893, 1539
NspV TTCGAA 2 cut(s) 371, 614
PaeI GCATGC 2 cut(s) 893, 1539
PaeR7I CTCGAG 1 cut(s) 203
PalAI GGCGCGCC 1 cut(s) 323
PasI CCCWGGG 1 cut(s) 265
PauI GCGCGC 2 cut(s) 323, 362
PciSI GCTCTTC 1 cut(s) 555
PcsI WCGNNNNNNNCGW 3 cut(s) 201, 255, 285
PctI GAATGC 3 cut(s) 448, 1052, 1309
PfeI GAWTC 3 cut(s) 874, 1035, 1093
PflFI GACNNNGTC 1 cut(s) 1453
PfoI TCCNGGA 1 cut(s) 41
PkrI GCNGC 8 cut(s) 224, 227, 230, 322, 341, 352, 355, 437
PleI GAGTC 5 cut(s) 230, 236, 262, 290, 1477
PluTI GGCGCC 2 cut(s) 183, 234
PmaCI CACGTG 1 cut(s) 1400
PmlI CACGTG 1 cut(s) 1400
PpsI GAGTC 5 cut(s) 230, 236, 262, 290, 1477
Ppu21I YACGTR 1 cut(s) 1400
PsiI TTATAA 1 cut(s) 1545
Psp124BI GAGCTC 2 cut(s) 50, 1137
Psp6I CCWGG 4 cut(s) 264, 671, 1159, 1225
PspCI CACGTG 1 cut(s) 1400
PspGI CCWGG 4 cut(s) 264, 671, 1159, 1225
PspPI GGNCC 6 cut(s) 127, 262, 450, 464, 1248, 1264
PsuI RGATCY 3 cut(s) 981, 1432, 1441
PsyI GACNNNGTC 1 cut(s) 1453
PteI GCGCGC 2 cut(s) 323, 362
PvuII CAGCTG 1 cut(s) 836
RruI TCGCGA 1 cut(s) 174
RsaI GTAC 1 cut(s) 701
RsaNI GTAC 1 cut(s) 700
RseI CAYNNNNRTG 2 cut(s) 1359, 1365
SacI GAGCTC 2 cut(s) 50, 1137
SacII CCGCGG 2 cut(s) 321, 354
SapI GCTCTTC 1 cut(s) 555
SaqAI TTAA 5 cut(s) 399, 426, 881, 960, 1232
SatI GCNGC 8 cut(s) 223, 226, 229, 321, 340, 351, 354, 436
Sau3AI GATC 5 cut(s) 639, 981, 1255, 1432, 1441
Sau96I GGNCC 6 cut(s) 127, 262, 450, 464, 1248, 1264
SchI GAGTC 5 cut(s) 230, 236, 263, 290, 1478
ScrFI CCNGG 8 cut(s) 43, 266, 448, 483, 673, 1161, 1227, 1243
SduI GDGCHC 3 cut(s) 50, 1137, 1339
SfaNI GCATC 5 cut(s) 219, 1357, 1384, 1501, 1598
SfoI GGCGCC 2 cut(s) 181, 232
Sfr274I CTCGAG 1 cut(s) 203
Sfr303I CCGCGG 2 cut(s) 321, 354
SfuI TTCGAA 2 cut(s) 371, 614
SgrBI CCGCGG 2 cut(s) 321, 354
SgsI GGCGCGCC 1 cut(s) 323
SinI GGWCC 3 cut(s) 127, 450, 1248
SlaI CTCGAG 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 1359, 1365
SmlI CTYRAG 4 cut(s) 203, 377, 596, 1231
SmoI CTYRAG 4 cut(s) 203, 377, 596, 1231
SphI GCATGC 2 cut(s) 893, 1539
Sse9I AATT 6 cut(s) 367, 388, 409, 1113, 1141, 1546
SspDI GGCGCC 2 cut(s) 179, 230
SspI AATATT 1 cut(s) 516
SspMI CTAG 1 cut(s) 555
SstI GAGCTC 2 cut(s) 50, 1137
StyD4I CCNGG 8 cut(s) 41, 264, 446, 481, 671, 1159, 1225, 1241
StyI CCWWGG 1 cut(s) 693
TaaI ACNGT 4 cut(s) 38, 54, 397, 1644
TaiI ACGT 3 cut(s) 757, 1276, 1402
TaqI TCGA 9 cut(s) 204, 288, 330, 371, 614, 709, 784, 1215, 1392
TasI AATT 6 cut(s) 367, 388, 409, 1113, 1141, 1546
TatI WGTACW 1 cut(s) 699
TauI GCSGC 7 cut(s) 228, 231, 323, 342, 353, 356, 438
TfiI GAWTC 3 cut(s) 874, 1035, 1093
Tru1I TTAA 5 cut(s) 399, 426, 881, 960, 1232
Tru9I TTAA 5 cut(s) 399, 426, 881, 960, 1232
TscAI CASTG 1 cut(s) 544
TseI GCWGC 1 cut(s) 222
TspDTI ATGAA 4 cut(s) 855, 887, 1134, 1318
TspGWI ACGGA 1 cut(s) 398
TspRI CASTG 1 cut(s) 544
Tth111I GACNNNGTC 1 cut(s) 1453
Vha464I CTTAAG 1 cut(s) 1231
VneI GTGCAC 1 cut(s) 1335
VpaK11BI GGWCC 3 cut(s) 127, 450, 1248
XapI RAATTY 2 cut(s) 388, 409
XceI RCATGY 3 cut(s) 691, 893, 1539
XcmI CCANNNNNNNNNTGG 1 cut(s) 1274
XhoI CTCGAG 1 cut(s) 203
XspI CTAG 1 cut(s) 555
Zsp2I ATGCAT 2 cut(s) 1356, 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.