MD10G1193500.v1.1

Histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0012235
Physical Location & Seq
Reverse (-)
28954018 .. 28965224
11207 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1193500.v1.1.491

Sequence Viewer

Length: 1653 bp
ATGGACACGCACTCCTCGCACCTCGCCGCGTCGAACCGTTCGCGGAGCTCGCAGACCCCATCCCCGTCGCACTCGGCCTCGGCTTCAGCCACCTCATCGATCCACAAGCGCAAGCTCGCATCCGAGGATCACGCACCGCCGTTCCCTCCCTCTTCCTTCTCGGCCGACACTCGCGACGGCGCGTTAACGTCTAACGACGACCTCGAGAGCATTTCTGCTCGCGGCGGCGGCGCCGATTCCGACTCGGACGATGAGTCCGACGCTCTGGTCGACGACGATGAGGAGGACTTCGACAACGACTCCTCCATGCGAAACTTCACGGCTGCGCGCCTCGATAACAGCGGGGGTTCTGCTGTGGCGCGCAACTCTAAACTCAAAATTGAGAACTCGACGGTCAAGAATGAGCCTTCGGATGGCGCGAAAGAAGGCGGCGCCCCCGCCGGAGCCGGTGCCTCGGGGACCACCGCAGCCGCAGGGTCGGTTCCGGGGATCGTGGTGAAGGAGGACGCCTCTAAGATTTTCACTGAGAATATACAGACCAGTGGAGCTTACAGTGCTAGAGAAGAGAGTTTGAAGAGAGAGGAGGAAGCAGGGAGGCTCAAGTTTGTGTGCCTTTCGAATGATGGTATTGATCAGCATATGATTTGGTTGGTAGGATTGAAGAACATATTTGCCAGGCAACTACCAAACATGCCAAAGGAGTACATTGTCCGACTTGTTATGGATAGAAGTCATAAATCAGTTATGGTTATCAGGCGTAATCATGTTGTCGGTGGCATAACATATCGACCATATATCAGTCAAAGGTTTGGAGAGATAGCCTTTTGTGCAATCACAGCTGATGAACAAGTTAAAGGTTATGGTACTAGACTGATGAATCACTTAAAACAGCATGCACGGGATGAGGACGGCCTAACCCATTTCCTGACTTATGCTGACAATAATGCTGTTGGCTACTTTATTAAACAGGGTTTCACAAAAGAGATTCACTTGGAGAAAGACCGATGGCACGGCTATATAAAAGATTACGATGGAGGAATCCTAATGGAATGCAGAATTGACCCAAAGCTTCCATACACCGACTTATCCACTATGATTCGTCGTCAGAGGCAGGCAATCGATGAAAAGATAAGAGAGCTCTCAAACTGCCACATTGTTTATCCTGGCATAGAGTTTCAAAAGAAAGAAGCTGGTATACCTAAAAAAATCATCAAGGCCGAGGAAATCCCTGGCTTGAGGGAGGCTGGGTGGACCCCGGATCAATGGGGACATTCACGCTTTGTAACTTTGAGTGGTTCCACAGACAGTGCCAGGAAGCATTTTACTGCATTCATGCGAGCACTTCTAAAGAGTATGCATGAACATGCTGATGCCTGGCCTTTCAAGGAACCAGTCGACGCACGTGATGTTCCTGATTATTATGACATCATAAAAGATCCTATGGATCTGAGGACGATGTCAAAGAGGGTAGAGTCGGAGCAGTATTATGTAACATTCGAGATGTTTGTTGCAGATGCCAAGAGGATGTTTGCAAATGCACGCACCTACAACTCCCCGGACACCATTTACTACAAATGCGCAACAAGGCTGGAAGCCCATTTTCAAAGCAAGGTTCAGTTAGGTCTCCAAGGTGGTGGTGCCAAAATCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000123 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010015 GO:0010321 GO:0010468 GO:0010484 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0061733 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04330 ko04919 ko05166 ko05203 map04330 map04919 map05166 map05203
Pfam Domains
Protein Families
Acetyltransf_1 Bromodomain

Protein Analysis

551

Amino Acids

61.15

Weight (kDa)

6.19

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_10 PF13673 241 - 327 7e-06 Acetyltransferase (GNAT) domain
Acetyltransf_1 PF00583 242 - 325 2.3e-11 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 247 - 326 1.1e-06 Acetyltransferase (GNAT) domain
Bromodomain PF00439 446 - 528 5.2e-22 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012235)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54610
fragaria_vesca FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590
malus_domestica MD10G1193500.v1.1
prunus_persica Prupe.8G232900_v2.0.a1
pyrus_communis pycom10g16730
rosa_chinensis RchiOBHm_Chr6g0289651
rosa_laevigata RLG00000012285
rosa_multiflora Rmu_sc0005376.1_g000013
rosa_roxburghii Rroxscaffold_7G00177770
rosa_rugosa Rorug06G0205300 Rorug06G0205400
rosa_samantha Rh6BG323600 Rh6CG330200 Rh6DG315400
rosa_wichuraiana Rw6G027340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 266
Acc16I TGCGCA 1 cut(s) 1579
AccB1I GGYRCC 4 cut(s) 230, 431, 449, 1637
AccI GTMKAC 3 cut(s) 270, 1195, 1395
AccII CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
AclWI GGATC 6 cut(s) 94, 135, 497, 1266, 1430, 1452
AcoI YGGCCR 1 cut(s) 162
AcuI CTGAAG 1 cut(s) 69
AcvI CACGTG 1 cut(s) 1403
AcyI GRCGYC 3 cut(s) 231, 432, 507
AfaI GTAC 2 cut(s) 704, 865
AfiI CCNNNNNNNGG 1 cut(s) 413
AgsI TTSAA 5 cut(s) 574, 661, 1178, 1384, 1604
AhdI GACNNNNNGTC 1 cut(s) 253
AjnI CCWGG 5 cut(s) 674, 1162, 1228, 1310, 1373
AluBI AGCT 7 cut(s) 48, 115, 548, 839, 1069, 1138, 1190
AluI AGCT 7 cut(s) 48, 115, 548, 839, 1069, 1138, 1190
Alw21I GWGCWC 3 cut(s) 50, 1140, 1342
Alw26I GTCTC 1 cut(s) 1628
AlwI GGATC 6 cut(s) 94, 135, 497, 1266, 1430, 1452
Ama87I CYCGRG 2 cut(s) 203, 454
AoxI GGCC 5 cut(s) 75, 162, 910, 1215, 1376
ApeKI GCWGC 2 cut(s) 323, 467
AspS9I GGNCC 2 cut(s) 459, 1251
AsuC2I CCSGG 3 cut(s) 486, 1256, 1556
AsuHPI GGTGA 1 cut(s) 508
AsuII TTCGAA 1 cut(s) 617
AvaI CYCGRG 2 cut(s) 203, 454
AvaII GGWCC 2 cut(s) 459, 1251
BanI GGYRCC 4 cut(s) 230, 431, 449, 1637
BanII GRGCYC 2 cut(s) 50, 1140
BarI GAAGNNNNNNTAC 2 cut(s) 1179, 1211
BbrPI CACGTG 1 cut(s) 1403
Bbv12I GWGCWC 3 cut(s) 50, 1140, 1342
BbvI GCAGC 2 cut(s) 310, 479
BccI CCATC 5 cut(s) 67, 407, 617, 999, 1025
BceAI ACGGC 5 cut(s) 124, 193, 336, 925, 1027
BciT130I CCWGG 5 cut(s) 676, 1164, 1230, 1312, 1375
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 3 cut(s) 486, 1256, 1556
BcoDI GTCTC 1 cut(s) 1628
BfaI CTAG 2 cut(s) 558, 867
BfoI RGCGCY 2 cut(s) 234, 435
BisI GCNGC 8 cut(s) 27, 223, 226, 229, 324, 430, 468, 471
BlsI GCNGC 8 cut(s) 28, 224, 227, 230, 325, 431, 469, 472
Bme1390I CCNGG 8 cut(s) 486, 676, 1164, 1230, 1256, 1312, 1375, 1556
Bme18I GGWCC 2 cut(s) 459, 1251
BmeRI GACNNNNNGTC 1 cut(s) 253
BmeT110I CYCGRG 2 cut(s) 203, 454
BmgT120I GGNCC 2 cut(s) 459, 1251
BmrFI CCNGG 8 cut(s) 486, 676, 1164, 1230, 1256, 1312, 1375, 1556
BmsI GCATC 3 cut(s) 128, 1360, 1504
BplI GAGNNNNNCTC 2 cut(s) 494, 526
Bpu14I TTCGAA 1 cut(s) 617
BpuEI CTTGAG 2 cut(s) 584, 1255
BpuMI CCSGG 3 cut(s) 486, 1256, 1556
Bsa29I ATCGAT 2 cut(s) 98, 1119
BsaAI YACGTR 1 cut(s) 1403
BsaHI GRCGYC 3 cut(s) 231, 432, 507
BsaI GGTCTC 1 cut(s) 1628
BsaJI CCNNGG 9 cut(s) 78, 123, 453, 485, 1218, 1228, 1254, 1554, 1627
BsaXI ACNNNNNCTCC 7 cut(s) 26, 284, 287, 314, 317, 1232, 1262
Bsc4I CCNNNNNNNGG 1 cut(s) 413
Bse118I RCCGGY 1 cut(s) 446
Bse1I ACTGG 3 cut(s) 540, 1391, 1648
BseBI CCWGG 5 cut(s) 676, 1164, 1230, 1312, 1375
BseCI ATCGAT 2 cut(s) 98, 1119
BseDI CCNNGG 9 cut(s) 78, 123, 453, 485, 1218, 1228, 1254, 1554, 1627
BseGI GGATG 5 cut(s) 59, 119, 418, 907, 1530
BseLI CCNNNNNNNGG 1 cut(s) 413
BseMII CTCAG 2 cut(s) 516, 1439
BseNI ACTGG 3 cut(s) 540, 1391, 1648
BsePI GCGCGC 2 cut(s) 326, 359
BseRI GAGGAG 4 cut(s) 4, 292, 296, 596
BseX3I CGGCCG 1 cut(s) 162
BseXI GCAGC 2 cut(s) 310, 479
BseYI CCCAGC 1 cut(s) 1244
Bsh1236I CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
Bsh1285I CGRYCG 1 cut(s) 165
BshFI GGCC 5 cut(s) 77, 164, 912, 1217, 1378
BshNI GGYRCC 4 cut(s) 230, 431, 449, 1637
BshVI ATCGAT 2 cut(s) 98, 1119
BsiEI CGRYCG 1 cut(s) 165
BsiHKAI GWGCWC 3 cut(s) 50, 1140, 1342
BsiHKCI CYCGRG 2 cut(s) 203, 454
BsiSI CCGG 5 cut(s) 441, 447, 485, 1256, 1556
BslFI GGGAC 2 cut(s) 472, 1281
BslI CCNNNNNNNGG 1 cut(s) 413
BsmAI GTCTC 1 cut(s) 1628
BsmFI GGGAC 2 cut(s) 472, 1281
BsmI GAATGC 2 cut(s) 1055, 1328
BsnI GGCC 5 cut(s) 77, 164, 912, 1217, 1378
Bso31I GGTCTC 1 cut(s) 1628
BsoBI CYCGRG 2 cut(s) 203, 454
Bsp119I TTCGAA 1 cut(s) 617
Bsp1286I GDGCHC 3 cut(s) 50, 1140, 1342
Bsp143I GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
Bsp68I TCGCGA 1 cut(s) 174
BspANI GGCC 5 cut(s) 77, 164, 912, 1217, 1378
BspCNI CTCAG 2 cut(s) 517, 1440
BspDI ATCGAT 2 cut(s) 98, 1119
BspFNI CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
BspPI GGATC 6 cut(s) 94, 135, 497, 1266, 1430, 1452
BspT104I TTCGAA 1 cut(s) 617
BspT107I GGYRCC 4 cut(s) 230, 431, 449, 1637
BspTNI GGTCTC 1 cut(s) 1628
BsrFI RCCGGY 1 cut(s) 446
BsrI ACTGG 3 cut(s) 540, 1391, 1648
BssAI RCCGGY 1 cut(s) 446
BssECI CCNNGG 9 cut(s) 78, 123, 453, 485, 1218, 1228, 1254, 1554, 1627
BssHII GCGCGC 2 cut(s) 326, 359
BssMI GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
BssNAI GTATAC 1 cut(s) 1196
BssNI GRCGYC 3 cut(s) 231, 432, 507
BssT1I CCWWGG 1 cut(s) 1627
Bst1107I GTATAC 1 cut(s) 1196
Bst2UI CCWGG 5 cut(s) 676, 1164, 1230, 1312, 1375
Bst4CI ACNGT 4 cut(s) 38, 394, 554, 1307
Bst6I CTCTTC 3 cut(s) 157, 558, 569
BstACI GRCGYC 3 cut(s) 231, 432, 507
BstBAI YACGTR 1 cut(s) 1403
BstBI TTCGAA 1 cut(s) 617
BstDEI CTNAG 3 cut(s) 513, 525, 1448
BstF5I GGATG 5 cut(s) 59, 119, 418, 907, 1530
BstFNI CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
BstH2I RGCGCY 2 cut(s) 234, 435
BstKTI GATC 7 cut(s) 102, 130, 492, 634, 1261, 1438, 1447
BstMAI GTCTC 1 cut(s) 1628
BstMBI GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
BstMCI CGRYCG 1 cut(s) 165
BstMWI GCNNNNNNNGC 6 cut(s) 16, 49, 228, 554, 827, 836
BstNI CCWGG 5 cut(s) 676, 1164, 1230, 1312, 1375
BstNSI RCATGY 3 cut(s) 694, 896, 1367
BstSCI CCNGG 8 cut(s) 484, 674, 1162, 1228, 1254, 1310, 1373, 1554
BstUI CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
BstV1I GCAGC 2 cut(s) 310, 479
BstX2I RGATCY 2 cut(s) 1435, 1444
BstXI CCANNNNNNTGG 1 cut(s) 1634
BstYI RGATCY 2 cut(s) 1435, 1444
BstZ17I GTATAC 1 cut(s) 1196
BstZI CGGCCG 1 cut(s) 162
Bsu15I ATCGAT 2 cut(s) 98, 1119
BsuRI GGCC 5 cut(s) 77, 164, 912, 1217, 1378
BsuTUI ATCGAT 2 cut(s) 98, 1119
BtsCI GGATG 5 cut(s) 59, 119, 418, 907, 1530
BtsIMutI CAGTG 4 cut(s) 522, 547, 559, 1312
BtuMI TCGCGA 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 446
Cfr13I GGNCC 2 cut(s) 459, 1251
ClaI ATCGAT 2 cut(s) 98, 1119
CseI GACGC 4 cut(s) 18, 269, 515, 1406
Csp6I GTAC 2 cut(s) 703, 864
CviAII CATG 7 cut(s) 307, 691, 764, 893, 1333, 1358, 1364
CviQI GTAC 2 cut(s) 703, 864
DdeI CTNAG 3 cut(s) 513, 525, 1448
DinI GGCGCC 2 cut(s) 232, 433
DpnI GATC 7 cut(s) 101, 129, 491, 633, 1260, 1437, 1446
DpnII GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
DrdI GACNNNNNNGTC 1 cut(s) 266
DriI GACNNNNNGTC 1 cut(s) 253
DseDI GACNNNNNNGTC 1 cut(s) 266
EaeI YGGCCR 1 cut(s) 162
EagI CGGCCG 1 cut(s) 162
Eam1104I CTCTTC 3 cut(s) 157, 558, 569
Eam1105I GACNNNNNGTC 1 cut(s) 253
EarI CTCTTC 3 cut(s) 157, 558, 569
Ecl136II GAGCTC 2 cut(s) 48, 1138
EclXI CGGCCG 1 cut(s) 162
Eco130I CCWWGG 1 cut(s) 1627
Eco24I GRGCYC 2 cut(s) 50, 1140
Eco31I GGTCTC 1 cut(s) 1628
Eco47I GGWCC 2 cut(s) 459, 1251
Eco52I CGGCCG 1 cut(s) 162
Eco53kI GAGCTC 2 cut(s) 48, 1138
Eco57I CTGAAG 1 cut(s) 69
Eco72I CACGTG 1 cut(s) 1403
Eco88I CYCGRG 2 cut(s) 203, 454
EcoICRI GAGCTC 2 cut(s) 48, 1138
EcoRII CCWGG 5 cut(s) 674, 1162, 1228, 1310, 1373
EcoT14I CCWWGG 1 cut(s) 1627
EcoT22I ATGCAT 1 cut(s) 1359
EcoT38I GRGCYC 2 cut(s) 50, 1140
EgeI GGCGCC 2 cut(s) 232, 433
EheI GGCGCC 2 cut(s) 232, 433
ErhI CCWWGG 1 cut(s) 1627
FaeI CATG 7 cut(s) 310, 694, 767, 896, 1336, 1361, 1367
FaqI GGGAC 2 cut(s) 472, 1281
FatI CATG 7 cut(s) 306, 690, 763, 892, 1332, 1357, 1363
FauI CCCGC 2 cut(s) 335, 445
FauNDI CATATG 1 cut(s) 639
FbaI TGATCA 1 cut(s) 631
FblI GTMKAC 3 cut(s) 270, 1195, 1395
Fnu4HI GCNGC 8 cut(s) 27, 223, 226, 229, 324, 430, 468, 471
FokI GGATG 5 cut(s) 46, 106, 425, 914, 1537
FriOI GRGCYC 2 cut(s) 50, 1140
Fsp4HI GCNGC 8 cut(s) 27, 223, 226, 229, 324, 430, 468, 471
FspBI CTAG 2 cut(s) 558, 867
FspI TGCGCA 1 cut(s) 1579
GluI GCNGC 8 cut(s) 27, 223, 226, 229, 324, 430, 468, 471
GsaI CCCAGC 1 cut(s) 1248
HaeII RGCGCY 2 cut(s) 234, 435
HaeIII GGCC 5 cut(s) 77, 164, 912, 1217, 1378
HapII CCGG 5 cut(s) 441, 447, 485, 1256, 1556
HgaI GACGC 4 cut(s) 18, 269, 515, 1406
Hin1I GRCGYC 3 cut(s) 231, 432, 507
Hin1II CATG 7 cut(s) 310, 694, 767, 896, 1336, 1361, 1367
HincII GTYRAC 3 cut(s) 186, 271, 1396
HindII GTYRAC 3 cut(s) 186, 271, 1396
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 9 cut(s) 236, 242, 254, 299, 877, 985, 1038, 1096, 1472
HpaI GTTAAC 1 cut(s) 186
HpaII CCGG 5 cut(s) 441, 447, 485, 1256, 1556
HphI GGTGA 1 cut(s) 508
Hpy166II GTNNAC 5 cut(s) 186, 271, 1196, 1251, 1396
Hpy188I TCNGA 9 cut(s) 124, 241, 247, 259, 412, 713, 1107, 1449, 1477
Hpy188III TCNNGA 6 cut(s) 173, 205, 397, 925, 1412, 1498
Hpy8I GTNNAC 5 cut(s) 186, 271, 1196, 1251, 1396
HpyAV CCTTC 4 cut(s) 166, 417, 419, 493
HpyCH4III ACNGT 4 cut(s) 38, 394, 554, 1307
HpyCH4IV ACGT 2 cut(s) 188, 1402
HpyCH4V TGCA 8 cut(s) 830, 896, 1053, 1328, 1357, 1511, 1532, 1538
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 49, 228, 554, 827, 836
HpyF3I CTNAG 3 cut(s) 513, 525, 1448
HpySE526I ACGT 2 cut(s) 188, 1402
Hsp92I GRCGYC 3 cut(s) 231, 432, 507
Hsp92II CATG 7 cut(s) 310, 694, 767, 896, 1336, 1361, 1367
KasI GGCGCC 2 cut(s) 230, 431
Ksp22I TGATCA 1 cut(s) 631
KspAI GTTAAC 1 cut(s) 186
Kzo9I GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
LmnI GCTCC 4 cut(s) 45, 443, 545, 1477
Lsp1109I GCAGC 2 cut(s) 310, 479
LweI GCATC 3 cut(s) 128, 1360, 1504
MaeI CTAG 2 cut(s) 558, 867
MaeII ACGT 2 cut(s) 188, 1402
MaeIII GTNAC 2 cut(s) 1282, 1489
MalI GATC 7 cut(s) 101, 129, 491, 633, 1260, 1437, 1446
MboI GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
MboII GAAGA 4 cut(s) 144, 575, 586, 673
MflI RGATCY 2 cut(s) 1435, 1444
MhlI GDGCHC 3 cut(s) 50, 1140, 1342
MluCI AATT 2 cut(s) 378, 1056
Mly113I GGCGCC 2 cut(s) 231, 432
MlyI GAGTC 4 cut(s) 236, 263, 293, 1481
MmeI TCCRAC 4 cut(s) 264, 282, 736, 1455
Mph1103I ATGCAT 1 cut(s) 1359
MseI TTAA 4 cut(s) 185, 852, 884, 963
MslI CAYNNNNRTG 2 cut(s) 1362, 1368
MspA1I CMGCKG 2 cut(s) 342, 839
MspI CCGG 5 cut(s) 441, 447, 485, 1256, 1556
MspR9I CCNGG 8 cut(s) 486, 676, 1164, 1230, 1256, 1312, 1375, 1556
Mva1269I GAATGC 2 cut(s) 1055, 1328
MvaI CCWGG 5 cut(s) 676, 1164, 1230, 1312, 1375
MvnI CGCG 8 cut(s) 29, 43, 174, 182, 222, 328, 361, 419
MwoI GCNNNNNNNGC 6 cut(s) 16, 49, 228, 554, 827, 836
NarI GGCGCC 2 cut(s) 231, 432
NciI CCSGG 3 cut(s) 486, 1256, 1556
NdeI CATATG 1 cut(s) 639
NdeII GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
NlaIII CATG 7 cut(s) 310, 694, 767, 896, 1336, 1361, 1367
NmeAIII GCCGAG 4 cut(s) 53, 59, 140, 1243
NruI TCGCGA 1 cut(s) 174
NsbI TGCGCA 1 cut(s) 1579
NsiI ATGCAT 1 cut(s) 1359
NspI RCATGY 3 cut(s) 694, 896, 1367
NspV TTCGAA 1 cut(s) 617
PaeI GCATGC 1 cut(s) 896
PaeR7I CTCGAG 1 cut(s) 203
PauI GCGCGC 2 cut(s) 326, 359
PcsI WCGNNNNNNNCGW 4 cut(s) 201, 255, 267, 416
PctI GAATGC 2 cut(s) 1055, 1328
PfeI GAWTC 5 cut(s) 236, 877, 985, 1038, 1096
PflFI GACNNNGTC 1 cut(s) 1456
PkrI GCNGC 8 cut(s) 28, 224, 227, 230, 325, 431, 469, 472
PleI GAGTC 4 cut(s) 236, 262, 293, 1480
PluTI GGCGCC 2 cut(s) 234, 435
PmaCI CACGTG 1 cut(s) 1403
PmlI CACGTG 1 cut(s) 1403
PpsI GAGTC 4 cut(s) 236, 262, 293, 1480
Ppu21I YACGTR 1 cut(s) 1403
Psp124BI GAGCTC 2 cut(s) 50, 1140
Psp6I CCWGG 5 cut(s) 674, 1162, 1228, 1310, 1373
PspCI CACGTG 1 cut(s) 1403
PspFI CCCAGC 1 cut(s) 1244
PspGI CCWGG 5 cut(s) 674, 1162, 1228, 1310, 1373
PspPI GGNCC 2 cut(s) 459, 1251
PsuI RGATCY 2 cut(s) 1435, 1444
PsyI GACNNNGTC 1 cut(s) 1456
PteI GCGCGC 2 cut(s) 326, 359
PvuII CAGCTG 1 cut(s) 839
RruI TCGCGA 1 cut(s) 174
RsaI GTAC 2 cut(s) 704, 865
RsaNI GTAC 2 cut(s) 703, 864
RseI CAYNNNNRTG 2 cut(s) 1362, 1368
SacI GAGCTC 2 cut(s) 50, 1140
SalI GTCGAC 2 cut(s) 269, 1394
SaqAI TTAA 4 cut(s) 185, 852, 884, 963
SatI GCNGC 8 cut(s) 27, 223, 226, 229, 324, 430, 468, 471
Sau3AI GATC 7 cut(s) 99, 127, 489, 631, 1258, 1435, 1444
Sau96I GGNCC 2 cut(s) 459, 1251
SchI GAGTC 4 cut(s) 236, 263, 293, 1481
ScrFI CCNGG 8 cut(s) 486, 676, 1164, 1230, 1256, 1312, 1375, 1556
SduI GDGCHC 3 cut(s) 50, 1140, 1342
SfaNI GCATC 3 cut(s) 128, 1360, 1504
SfoI GGCGCC 2 cut(s) 232, 433
Sfr274I CTCGAG 1 cut(s) 203
SfuI TTCGAA 1 cut(s) 617
SinI GGWCC 2 cut(s) 459, 1251
SlaI CTCGAG 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 1362, 1368
SmlI CTYRAG 3 cut(s) 203, 599, 1234
SmoI CTYRAG 3 cut(s) 203, 599, 1234
SphI GCATGC 1 cut(s) 896
Sse9I AATT 2 cut(s) 378, 1056
SspDI GGCGCC 2 cut(s) 230, 431
SspMI CTAG 2 cut(s) 558, 867
SstI GAGCTC 2 cut(s) 50, 1140
StyD4I CCNGG 8 cut(s) 484, 674, 1162, 1228, 1254, 1310, 1373, 1554
StyI CCWWGG 1 cut(s) 1627
TaaI ACNGT 4 cut(s) 38, 394, 554, 1307
TaiI ACGT 2 cut(s) 191, 1405
TaqII GACCGA 1 cut(s) 1017
TasI AATT 2 cut(s) 378, 1056
TatI WGTACW 1 cut(s) 702
TauI GCSGC 6 cut(s) 29, 225, 228, 231, 432, 473
TfiI GAWTC 5 cut(s) 236, 877, 985, 1038, 1096
Tru1I TTAA 4 cut(s) 185, 852, 884, 963
Tru9I TTAA 4 cut(s) 185, 852, 884, 963
TscAI CASTG 4 cut(s) 529, 547, 559, 1312
TseI GCWGC 2 cut(s) 323, 467
TspDTI ATGAA 5 cut(s) 858, 890, 1137, 1321, 1374
TspRI CASTG 4 cut(s) 529, 547, 559, 1312
Tth111I GACNNNGTC 1 cut(s) 1456
VpaK11BI GGWCC 2 cut(s) 459, 1251
XceI RCATGY 3 cut(s) 694, 896, 1367
XhoI CTCGAG 1 cut(s) 203
XmiI GTMKAC 3 cut(s) 270, 1195, 1395
XspI CTAG 2 cut(s) 558, 867
Zsp2I ATGCAT 1 cut(s) 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.