Rroxscaffold_7G00177770

Histone acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0012235
Physical Location & Seq
Forward (+)
17374925 .. 17380824
5900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00177770.1

Sequence Viewer

Length: 1341 bp
ATGCGCAATTTCACCGCCGCGCGCCTCGACAACAGCGGCGGCTCCGCCGCGGCCTCCGCGCGCAATTCGAAGCTCAAGACGGAGAATTTGACGGTTAAGATTGAGAATTCGGATAGTGTTAAGGACGGCGGTGGGAATGCCGGGACCTGTACGGTGGGGCCTACTTCGTCGGTGCCGGGGATAATGGTTAAGGAGGACGCAACTAAAATTTTTACAGAGAATATACAAACCAGTGGAGCTTATAGTGCTAGAGAGGAGCTACTGAAGAGAGAGGAGGAAGCAGGGAGGCTCAAGTTTGTGTGCCTTTCGAATGATGGTATTGATGAGCATATGGTCTGGTTGGTAGGATTGAAGAACATATTTGCCAGGCAACTACCAAACATGCCCAAGGAGTACATTGTTCGACTGGTTATGGATAGGAGCCATAAGTCGGTTATGGTTATCAGACGTAATCATGTTGTTGGTGGCATAACTTATCGACCATATGTCAGCCAAAGGTTTGGAGAGATAGCTTTTTGCGCAATCACAGCTGATGAACAAGTAAAAGGTTATGGCACCAGACTGATGAATCACTTAAAACAACATGCACGGGATGTTGATGGGCTAACCCATTTCCTGACCTATGCTGACAATAATGCCGTTGGCTATTTTATTAAACAGGGTTTTACGAAAGAGATTTACCTGGAGAAGGACAGATGGCATGGCTATATAAAAGACTATGATGGAGGAATCCTAATGGAATGCAAAATAGACCAAAAGCTTCCATATACTGATTTATCAACTATGATTCGCCGTCAAAGGCAGGCAATTGATGAAAAGATAAGAGAGCTCTCAAATTGTCACATTGTTTATCCTGGCATTGATTTCCAAAAGAAAGAAGCTGGTATTCCTAAAAAGCTCATCAAGGTCGAGGACATCCCTGGCTTGAGGGAGGCTGGGTGGACCCCTGACCAATTTGGCCATTCACGTTTTGGAGCTTTGACAGCTTCCACAGAGAATGCCAAAAAGCATTTGACTGCTTTCATGCGTGCCCTTCTAAAGTCTATGCATGACCATGTTGATGCGTGGCCATTCAAGGAACCAGTCGATGCACGTGATGTTCCTGATTATTATGACATCATCAAAGATCCTATGGATCTAAAGACAATGTCTAAGAGGGTAGAGTCGGAGCAGTATTATGTAACATTTGAGATGTTTGTTGCGGATGCCAAGAGGATGTTCGCAAATGCACGCACTTACAATTCTCCCGATACCATTTACTACAAGTGTGCAACCAGGCTGGAATCTCACTTTCAAAGCAAAGTGCAATCAGGTCTCCAAGCTGGCGCCAAAATTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000123 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004402 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009628 GO:0009653 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009987 GO:0010015 GO:0010321 GO:0010468 GO:0010484 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048367 GO:0048518 GO:0048522 GO:0048580 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051252 GO:0051254 GO:0051276 GO:0060255 GO:0061458 GO:0061733 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990234 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04330 ko04919 ko05166 ko05203 map04330 map04919 map05166 map05203
Pfam Domains
Protein Families
Acetyltransf_1 Bromodomain

Protein Analysis

446

Amino Acids

50.56

Weight (kDa)

8.84

Isoelectric Point (pI)

37.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 139 - 222 2.6e-11 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 144 - 223 3.1e-06 Acetyltransferase (GNAT) domain
Bromodomain PF00439 343 - 425 8.5e-22 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012235)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54610
fragaria_vesca FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590 FvH4_2g22590
malus_domestica MD10G1193500.v1.1
prunus_persica Prupe.8G232900_v2.0.a1
pyrus_communis pycom10g16730
rosa_chinensis RchiOBHm_Chr6g0289651
rosa_laevigata RLG00000012285
rosa_multiflora Rmu_sc0005376.1_g000013
rosa_roxburghii Rroxscaffold_7G00177770
rosa_rugosa Rorug06G0205300 Rorug06G0205400
rosa_samantha Rh6BG323600 Rh6CG330200 Rh6DG315400
rosa_wichuraiana Rw6G027340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 5, 520
AccB1I GGYRCC 3 cut(s) 172, 554, 1325
AccII CGCG 5 cut(s) 20, 22, 50, 59, 61
AclWI GGATC 2 cut(s) 1121, 1143
AcoI YGGCCR 2 cut(s) 958, 1067
AcsI RAATTY 4 cut(s) 85, 106, 207, 1332
AcuI CTGAAG 1 cut(s) 284
AcvI CACGTG 1 cut(s) 1094
AcyI GRCGYC 1 cut(s) 1326
AfaI GTAC 2 cut(s) 151, 395
AfiI CCNNNNNNNGG 2 cut(s) 430, 688
AgsI TTSAA 3 cut(s) 352, 1075, 1295
AhdI GACNNNNNGTC 1 cut(s) 485
AjnI CCWGG 5 cut(s) 365, 681, 853, 919, 1274
AjuI GAANNNNNNNTTGG 2 cut(s) 1202, 1234
Alw21I GWGCWC 1 cut(s) 831
Alw26I GTCTC 1 cut(s) 1319
AlwI GGATC 2 cut(s) 1121, 1143
AoxI GGCC 4 cut(s) 51, 158, 958, 1067
ApoI RAATTY 4 cut(s) 85, 106, 207, 1332
ArsI GACNNNNNNTTYG 2 cut(s) 70, 102
AspLEI GCGC 7 cut(s) 6, 22, 24, 61, 63, 521, 1328
AspS9I GGNCC 3 cut(s) 144, 158, 942
AsuC2I CCSGG 2 cut(s) 142, 177
AsuHPI GGTGA 1 cut(s) 4
AsuII TTCGAA 2 cut(s) 68, 308
AvaII GGWCC 2 cut(s) 144, 942
BaeGI GKGCMC 1 cut(s) 1033
BalI TGGCCA 2 cut(s) 960, 1069
BanI GGYRCC 3 cut(s) 172, 554, 1325
BanII GRGCYC 1 cut(s) 831
BbrPI CACGTG 1 cut(s) 1094
Bbv12I GWGCWC 1 cut(s) 831
BccI CCATC 4 cut(s) 308, 593, 690, 716
BceAI ACGGC 3 cut(s) 142, 623, 777
BciT130I CCWGG 5 cut(s) 367, 683, 855, 921, 1276
BcnI CCSGG 2 cut(s) 142, 177
BcoDI GTCTC 1 cut(s) 1319
BfaI CTAG 1 cut(s) 249
BfoI RGCGCY 1 cut(s) 1329
BisI GCNGC 5 cut(s) 18, 37, 40, 48, 51
BlsI GCNGC 5 cut(s) 19, 38, 41, 49, 52
Bme1390I CCNGG 7 cut(s) 142, 177, 367, 683, 855, 921, 1276
Bme18I GGWCC 2 cut(s) 144, 942
BmeRI GACNNNNNGTC 1 cut(s) 485
BmgT120I GGNCC 3 cut(s) 144, 158, 942
BmiI GGNNCC 9 cut(s) 43, 145, 159, 174, 422, 556, 944, 1080, 1327
BmrFI CCNGG 7 cut(s) 142, 177, 367, 683, 855, 921, 1276
BmsI GCATC 3 cut(s) 1051, 1078, 1195
BpmI CTGGAG 1 cut(s) 704
Bpu14I TTCGAA 2 cut(s) 68, 308
BpuEI CTTGAG 3 cut(s) 59, 275, 946
BpuMI CCSGG 2 cut(s) 142, 177
BsaAI YACGTR 1 cut(s) 1094
BsaHI GRCGYC 1 cut(s) 1326
BsaI GGTCTC 1 cut(s) 1319
BsaJI CCNNGG 4 cut(s) 48, 176, 387, 919
BsaXI ACNNNNNCTCC 2 cut(s) 923, 953
Bsc4I CCNNNNNNNGG 2 cut(s) 430, 688
Bse1I ACTGG 3 cut(s) 231, 411, 1082
BseBI CCWGG 5 cut(s) 367, 683, 855, 921, 1276
BseDI CCNNGG 4 cut(s) 48, 176, 387, 919
BseGI GGATG 4 cut(s) 598, 915, 1210, 1221
BseLI CCNNNNNNNGG 2 cut(s) 430, 688
BseNI ACTGG 3 cut(s) 231, 411, 1082
BsePI GCGCGC 2 cut(s) 20, 59
BseRI GAGGAG 2 cut(s) 269, 287
BseSI GKGCMC 1 cut(s) 1033
BseYI CCCAGC 1 cut(s) 935
Bsh1236I CGCG 5 cut(s) 20, 22, 50, 59, 61
BshFI GGCC 4 cut(s) 53, 160, 960, 1069
BshNI GGYRCC 3 cut(s) 172, 554, 1325
BsiHKAI GWGCWC 1 cut(s) 831
BsiSI CCGG 2 cut(s) 141, 176
BslFI GGGAC 1 cut(s) 157
BslI CCNNNNNNNGG 2 cut(s) 430, 688
BsmAI GTCTC 1 cut(s) 1319
BsmFI GGGAC 1 cut(s) 157
BsmI GAATGC 3 cut(s) 142, 746, 1003
BsnI GGCC 4 cut(s) 53, 160, 960, 1069
Bso31I GGTCTC 1 cut(s) 1319
Bsp119I TTCGAA 2 cut(s) 68, 308
Bsp1286I GDGCHC 2 cut(s) 831, 1033
Bsp143I GATC 2 cut(s) 1126, 1135
BspANI GGCC 4 cut(s) 53, 160, 960, 1069
BspFNI CGCG 5 cut(s) 20, 22, 50, 59, 61
BspLI GGNNCC 9 cut(s) 43, 145, 159, 174, 422, 556, 944, 1080, 1327
BspPI GGATC 2 cut(s) 1121, 1143
BspT104I TTCGAA 2 cut(s) 68, 308
BspT107I GGYRCC 3 cut(s) 172, 554, 1325
BspTNI GGTCTC 1 cut(s) 1319
BsrI ACTGG 3 cut(s) 231, 411, 1082
BssECI CCNNGG 4 cut(s) 48, 176, 387, 919
BssHII GCGCGC 2 cut(s) 20, 59
BssMI GATC 2 cut(s) 1126, 1135
BssNI GRCGYC 1 cut(s) 1326
BssT1I CCWWGG 1 cut(s) 387
Bst2UI CCWGG 5 cut(s) 367, 683, 855, 921, 1276
Bst4CI ACNGT 2 cut(s) 94, 154
Bst6I CTCTTC 1 cut(s) 260
BstACI GRCGYC 1 cut(s) 1326
BstBAI YACGTR 1 cut(s) 1094
BstBI TTCGAA 2 cut(s) 68, 308
BstC8I GCNNGC 6 cut(s) 22, 61, 804, 1029, 1231, 1324
BstDEI CTNAG 1 cut(s) 1152
BstDSI CCRYGG 1 cut(s) 48
BstENI CCTNNNNNAGG 1 cut(s) 686
BstF5I GGATG 4 cut(s) 598, 915, 1210, 1221
BstFNI CGCG 5 cut(s) 20, 22, 50, 59, 61
BstH2I RGCGCY 1 cut(s) 1329
BstHHI GCGC 7 cut(s) 6, 22, 24, 61, 63, 521, 1328
BstKTI GATC 2 cut(s) 1129, 1138
BstMAI GTCTC 1 cut(s) 1319
BstMBI GATC 2 cut(s) 1126, 1135
BstMWI GCNNNNNNNGC 5 cut(s) 56, 245, 518, 527, 983
BstNI CCWGG 5 cut(s) 367, 683, 855, 921, 1276
BstNSI RCATGY 2 cut(s) 385, 587
BstSCI CCNGG 7 cut(s) 140, 175, 365, 681, 853, 919, 1274
BstSLI GKGCMC 1 cut(s) 1033
BstUI CGCG 5 cut(s) 20, 22, 50, 59, 61
BstX2I RGATCY 2 cut(s) 1126, 1135
BstXI CCANNNNNNTGG 1 cut(s) 500
BstYI RGATCY 2 cut(s) 1126, 1135
BsuRI GGCC 4 cut(s) 53, 160, 960, 1069
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 4 cut(s) 598, 915, 1210, 1221
BtsIMutI CAGTG 1 cut(s) 238
Cac8I GCNNGC 6 cut(s) 22, 61, 804, 1029, 1231, 1324
CfoI GCGC 7 cut(s) 6, 22, 24, 61, 63, 521, 1328
Cfr13I GGNCC 3 cut(s) 144, 158, 942
Cfr42I CCGCGG 1 cut(s) 51
CseI GACGC 1 cut(s) 206
Csp6I GTAC 2 cut(s) 150, 394
CviAII CATG 7 cut(s) 382, 455, 584, 701, 1024, 1049, 1055
CviQI GTAC 2 cut(s) 150, 394
DdeI CTNAG 1 cut(s) 1152
DinI GGCGCC 1 cut(s) 1327
DpnI GATC 2 cut(s) 1128, 1137
DpnII GATC 2 cut(s) 1126, 1135
DriI GACNNNNNGTC 1 cut(s) 485
EaeI YGGCCR 2 cut(s) 958, 1067
Eam1104I CTCTTC 1 cut(s) 260
Eam1105I GACNNNNNGTC 1 cut(s) 485
EarI CTCTTC 1 cut(s) 260
EciI GGCGGA 1 cut(s) 34
Ecl136II GAGCTC 1 cut(s) 829
Eco130I CCWWGG 1 cut(s) 387
Eco24I GRGCYC 1 cut(s) 831
Eco31I GGTCTC 1 cut(s) 1319
Eco47I GGWCC 2 cut(s) 144, 942
Eco53kI GAGCTC 1 cut(s) 829
Eco57I CTGAAG 1 cut(s) 284
Eco72I CACGTG 1 cut(s) 1094
EcoICRI GAGCTC 1 cut(s) 829
EcoNI CCTNNNNNAGG 1 cut(s) 686
EcoO109I RGGNCCY 2 cut(s) 144, 158
EcoRI GAATTC 1 cut(s) 106
EcoRII CCWGG 5 cut(s) 365, 681, 853, 919, 1274
EcoT14I CCWWGG 1 cut(s) 387
EcoT22I ATGCAT 1 cut(s) 1050
EcoT38I GRGCYC 1 cut(s) 831
EgeI GGCGCC 1 cut(s) 1327
EheI GGCGCC 1 cut(s) 1327
ErhI CCWWGG 1 cut(s) 387
FaeI CATG 7 cut(s) 385, 458, 587, 704, 1027, 1052, 1058
FaqI GGGAC 1 cut(s) 157
FatI CATG 7 cut(s) 381, 454, 583, 700, 1023, 1048, 1054
FauNDI CATATG 2 cut(s) 330, 484
Fnu4HI GCNGC 5 cut(s) 18, 37, 40, 48, 51
FokI GGATG 4 cut(s) 605, 902, 1217, 1228
FriOI GRGCYC 1 cut(s) 831
Fsp4HI GCNGC 5 cut(s) 18, 37, 40, 48, 51
FspBI CTAG 1 cut(s) 249
FspI TGCGCA 2 cut(s) 5, 520
GlaI GCGC 7 cut(s) 5, 21, 23, 60, 62, 520, 1327
GluI GCNGC 5 cut(s) 18, 37, 40, 48, 51
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 704
HaeII RGCGCY 1 cut(s) 1329
HaeIII GGCC 4 cut(s) 53, 160, 960, 1069
HapII CCGG 2 cut(s) 141, 176
HgaI GACGC 1 cut(s) 206
HhaI GCGC 7 cut(s) 6, 22, 24, 61, 63, 521, 1328
Hin1I GRCGYC 1 cut(s) 1326
Hin1II CATG 7 cut(s) 385, 458, 587, 704, 1027, 1052, 1058
Hin6I GCGC 7 cut(s) 4, 20, 22, 59, 61, 519, 1326
HinP1I GCGC 7 cut(s) 4, 20, 22, 59, 61, 519, 1326
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 5 cut(s) 568, 729, 787, 1163, 1283
HpaII CCGG 2 cut(s) 141, 176
HphI GGTGA 1 cut(s) 4
Hpy166II GTNNAC 1 cut(s) 942
Hpy188I TCNGA 3 cut(s) 112, 446, 1168
Hpy188III TCNNGA 4 cut(s) 76, 616, 1103, 1247
Hpy8I GTNNAC 1 cut(s) 942
Hpy99I CGWCG 1 cut(s) 172
HpyAV CCTTC 2 cut(s) 682, 1043
HpyCH4III ACNGT 2 cut(s) 94, 154
HpyCH4IV ACGT 3 cut(s) 448, 967, 1093
HpyCH4V TGCA 7 cut(s) 587, 744, 1048, 1091, 1229, 1271, 1306
HpyF10VI GCNNNNNNNGC 5 cut(s) 56, 245, 518, 527, 983
HpyF3I CTNAG 1 cut(s) 1152
HpySE526I ACGT 3 cut(s) 448, 967, 1093
Hsp92I GRCGYC 1 cut(s) 1326
Hsp92II CATG 7 cut(s) 385, 458, 587, 704, 1027, 1052, 1058
HspAI GCGC 7 cut(s) 4, 20, 22, 59, 61, 519, 1326
KasI GGCGCC 1 cut(s) 1325
KspI CCGCGG 1 cut(s) 51
Kzo9I GATC 2 cut(s) 1126, 1135
LmnI GCTCC 6 cut(s) 47, 236, 256, 420, 974, 1168
LweI GCATC 3 cut(s) 1051, 1078, 1195
MaeI CTAG 1 cut(s) 249
MaeII ACGT 3 cut(s) 448, 967, 1093
MaeIII GTNAC 2 cut(s) 839, 1180
MalI GATC 2 cut(s) 1128, 1137
MboI GATC 2 cut(s) 1126, 1135
MboII GAAGA 2 cut(s) 277, 364
MfeI CAATTG 1 cut(s) 807
MflI RGATCY 2 cut(s) 1126, 1135
MhlI GDGCHC 2 cut(s) 831, 1033
MlsI TGGCCA 2 cut(s) 960, 1069
MluNI TGGCCA 2 cut(s) 960, 1069
Mly113I GGCGCC 1 cut(s) 1326
MlyI GAGTC 1 cut(s) 1172
MmeI TCCRAC 1 cut(s) 1146
Mox20I TGGCCA 2 cut(s) 960, 1069
Mph1103I ATGCAT 1 cut(s) 1050
MscI TGGCCA 2 cut(s) 960, 1069
MseI TTAA 5 cut(s) 96, 120, 189, 575, 654
MslI CAYNNNNRTG 2 cut(s) 1053, 1059
Msp20I TGGCCA 2 cut(s) 960, 1069
MspA1I CMGCKG 3 cut(s) 36, 50, 530
MspI CCGG 2 cut(s) 141, 176
MspR9I CCNGG 7 cut(s) 142, 177, 367, 683, 855, 921, 1276
MunI CAATTG 1 cut(s) 807
Mva1269I GAATGC 3 cut(s) 142, 746, 1003
MvaI CCWGG 5 cut(s) 367, 683, 855, 921, 1276
MvnI CGCG 5 cut(s) 20, 22, 50, 59, 61
MwoI GCNNNNNNNGC 5 cut(s) 56, 245, 518, 527, 983
NarI GGCGCC 1 cut(s) 1326
NciI CCSGG 2 cut(s) 142, 177
NdeI CATATG 2 cut(s) 330, 484
NdeII GATC 2 cut(s) 1126, 1135
NlaIII CATG 7 cut(s) 385, 458, 587, 704, 1027, 1052, 1058
NlaIV GGNNCC 9 cut(s) 43, 145, 159, 174, 422, 556, 944, 1080, 1327
NmuCI GTSAC 1 cut(s) 839
NsbI TGCGCA 2 cut(s) 5, 520
NsiI ATGCAT 1 cut(s) 1050
NspI RCATGY 2 cut(s) 385, 587
NspV TTCGAA 2 cut(s) 68, 308
PauI GCGCGC 2 cut(s) 20, 59
PctI GAATGC 3 cut(s) 142, 746, 1003
PfeI GAWTC 4 cut(s) 568, 729, 787, 1283
PflFI GACNNNGTC 1 cut(s) 1147
PkrI GCNGC 5 cut(s) 19, 38, 41, 49, 52
PleI GAGTC 1 cut(s) 1171
PluTI GGCGCC 1 cut(s) 1329
PmaCI CACGTG 1 cut(s) 1094
PmlI CACGTG 1 cut(s) 1094
PpsI GAGTC 1 cut(s) 1171
Ppu21I YACGTR 1 cut(s) 1094
PpuMI RGGWCCY 1 cut(s) 144
Psp124BI GAGCTC 1 cut(s) 831
Psp5II RGGWCCY 1 cut(s) 144
Psp6I CCWGG 5 cut(s) 365, 681, 853, 919, 1274
PspCI CACGTG 1 cut(s) 1094
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 5 cut(s) 365, 681, 853, 919, 1274
PspN4I GGNNCC 9 cut(s) 43, 145, 159, 174, 422, 556, 944, 1080, 1327
PspPI GGNCC 3 cut(s) 144, 158, 942
PspPPI RGGWCCY 1 cut(s) 144
PsuI RGATCY 2 cut(s) 1126, 1135
PsyI GACNNNGTC 1 cut(s) 1147
PteI GCGCGC 2 cut(s) 20, 59
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 2 cut(s) 151, 395
RsaNI GTAC 2 cut(s) 150, 394
RseI CAYNNNNRTG 2 cut(s) 1053, 1059
SacI GAGCTC 1 cut(s) 831
SacII CCGCGG 1 cut(s) 51
SaqAI TTAA 5 cut(s) 96, 120, 189, 575, 654
SatI GCNGC 5 cut(s) 18, 37, 40, 48, 51
Sau3AI GATC 2 cut(s) 1126, 1135
Sau96I GGNCC 3 cut(s) 144, 158, 942
SchI GAGTC 1 cut(s) 1172
ScrFI CCNGG 7 cut(s) 142, 177, 367, 683, 855, 921, 1276
SduI GDGCHC 2 cut(s) 831, 1033
SfaNI GCATC 3 cut(s) 1051, 1078, 1195
SfoI GGCGCC 1 cut(s) 1327
Sfr303I CCGCGG 1 cut(s) 51
SfuI TTCGAA 2 cut(s) 68, 308
SgrBI CCGCGG 1 cut(s) 51
SinI GGWCC 2 cut(s) 144, 942
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1059
SmlI CTYRAG 3 cut(s) 74, 290, 925
SmoI CTYRAG 3 cut(s) 74, 290, 925
SspDI GGCGCC 1 cut(s) 1325
SspMI CTAG 1 cut(s) 249
SstI GAGCTC 1 cut(s) 831
StyD4I CCNGG 7 cut(s) 140, 175, 365, 681, 853, 919, 1274
StyI CCWWGG 1 cut(s) 387
TaaI ACNGT 2 cut(s) 94, 154
TaiI ACGT 3 cut(s) 451, 970, 1096
TaqI TCGA 7 cut(s) 27, 68, 308, 403, 478, 909, 1086
TatI WGTACW 1 cut(s) 393
TauI GCSGC 5 cut(s) 20, 39, 42, 50, 53
TfiI GAWTC 4 cut(s) 568, 729, 787, 1283
Tru1I TTAA 5 cut(s) 96, 120, 189, 575, 654
Tru9I TTAA 5 cut(s) 96, 120, 189, 575, 654
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 1 cut(s) 839
Tsp45I GTSAC 1 cut(s) 839
TspDTI ATGAA 4 cut(s) 549, 581, 828, 1012
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 1 cut(s) 238
Tth111I GACNNNGTC 1 cut(s) 1147
VpaK11BI GGWCC 2 cut(s) 144, 942
XagI CCTNNNNNAGG 1 cut(s) 686
XapI RAATTY 4 cut(s) 85, 106, 207, 1332
XceI RCATGY 2 cut(s) 385, 587
XcmI CCANNNNNNNNNTGG 1 cut(s) 968
XspI CTAG 1 cut(s) 249
Zsp2I ATGCAT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.