Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0010991

Physical Location & Seq

Genomic Coordinates Reverse (-)

21108566 .. 21113849

Gene Structure 5284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g26240.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGCGAGAAGCACTGCTATGTGAATCCCCAAGCGTCAGCGACGTCGTATTGTGCGCCAAGAAGAAGCGTTCAGACCACGAGGAGGACGCGCCGCCGCAGCTGGTCGTTGCGGCCCCGGCGCTGTCCATAGGCCGTAGCCGCTCGCAGGCCGGCACTCGCCGCGTCACTCCGACGACGGCTGCTGCGGCGGAGGAGTCGAGCATCGAGAGGTTTCTCCCCAACGGGGATCTCTACATCGGGAGCTTCGCCGGGTCTGCCCCGAACGGATCCGGTAAGTACCTCTGGACTGACGGCTGCATGTACGAAGGAGAGTGGCGGAAGGGCAAGGCCTCGGGAAAAGGGAAGTTCTCGTGGCCGTCGGGCGCGACTTACGAGGGCGAATTCAAGTCGGGTCGGATGGAAGGGTTCGGCACATTTATCGGATCCGACGGGGACACGTACCGCGGGTCGTGGTCGGCGGATCGGAAGCACGGGATGGGCCAGAAGCGCTACGCCAACGGCGATTTCTACGAGGGATCGTGGAAGCGGAACCTCCAGGACGGCCAGGGGAGGTACGTGTGGCAGAACGGGAACGAGTACGTCGGGGAATGGAAGGCCGGAGTTATTTCGGGTCGGGGCGTTTTGATTTGGGCCAATGGGAACAAGTACGACGGTCAGTGGGAGAATGGAGTCCCCAAAGGTAACGGAATATTCACGTGGCCGGACGGGAGCTGCTACGTCGGGTGTTGGAACAAGGATTTGAAGATTCAGCAGCTTAACGGGACGTTTTATCCGGCAAACGGCGGGAAGGAGCAGAGCTTCGACGACATTGGGCCGTTCGCGGCGGAGAATTTGACGATTACGATGAGGAAAAGGTCATCGGTGGACGGGAGTAGGGGGAGCTTGGCGGAGAGGACGTTTCCGAGGATTTGTATTTGGGAGAGTGACGGTGAGGCTGGGGATATTACTTGTGATATTATTGATAATGTGGAGGCTTCTATGTTCTACCGGAACGGGGCCGGTTTCGATCGGGACTCTCTTATGCAGTTCAAGAGGAGTCCCTGTTGCTTTTCCGGGGAGCCGAAGAAACCCGGGCAGCCTATTTCGAAAGGGCACAAGAACTATGACTTGATGCTCAATCTTCAACTGGGGATTAGGTACTCCATTGGGAAGCATGCTTCTATAGTGCGGGACCTTAAACCCAGTGATTTTGATCCAAAGGAGAAGTTCTGGACCAGGTTTCCGCCGGAGGGATCCAACAAAACGCCGCCTCATCAATCGTTTGAGTTCAGGTGGAAGGACTACTGTCCTATGGTGTTCAGGCGTTTGAGGGAGTTATTCCAAGTAGATCCTGCAGATTATATGCTGGCTATTTGTGGAAATGATGCTCTTAGGGAGCTTTCTTCTCCAGGGAAGAGCGGCAGCTTCTTTTACCTTACTCAGGATGATAGATTCATGATTAAGACGGTCAAGAAATCAGAAGTCAAGGTGCTAATAAGGATGCTTCCAAGTTATTATAGACACATGTCTCGGTATGAAAATTCTCTTGTGACCAAATTCTATGGGGTGCATTGTGTCAAACCTGTTGGCGGACAGAAGACAAGGTTTATAGTGATGGGCAATTTGTTCTGCTCGGAATATAGAATACATAGACGATTTGACCTGAAAGGATCATCCCATGGTAGAACAACTGATAAGCCCGAGGGGGAAATTGATGAAATTACAACCCTGAAGGACCTTGATCTTAATTTTGTGTTTCGCCTGCAAGGAAAATGGTACCAGGAGCTTATGAAGCAAATTGATCTAGATTGTGAATTTTTGGAAGCGGAGAGAATCATGGATTATAGTCTTTTGGTTGGACTTCATTTTTACGATGGCAATACGTATGACAAAATGGCGCTATCACCTTTTCTCTTGCGCTCTGGCCAAAAGGATTCATTTCAGAATGAGAAGTTTATGCGCGGGTGTCGGTTTCTTGAAGCTGAGCTACAAGACATGGATCGAGTTTTATCTGGCCGGAAATCTCGGATCTGCTTAGGAGCCAACATGCCTGCAAGGGCAGAGCGGATGGCTCGAAGGAGTGACTTCGATCAGTACACCCCTGGTGGGTTCAGTCATTTGACCCCTTCACGCAGCGGTGAAATCTATGATGTAGTTCTCTACTTCGGGATAATAGACATTTTACAAGACTACGATATCAGCAAAAAGTTAGAACATGCATATAAATCCTTGCAAGTTGACCCAACTTCAATATCAGCTGTGGATCCCAAGCTTTACTCAAAGAGGTTTCGGGATTTCATTGGAAGAATTTTCATTGAAGACAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0003785 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008092 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009958 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016020 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0022414 GO:0022622 GO:0030258 GO:0032501 GO:0032502 GO:0040007 GO:0044237 GO:0044238 GO:0044255 GO:0044464 GO:0044877 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051015 GO:0071704 GO:0071944 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

769

Amino Acids

87.22

Weight (kDa)

8.61

Isoelectric Point (pI)

41.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	101 - 122	3.4e-07	MORN repeat
MORN	PF02493	170 - 191	6.8e-06	MORN repeat
MORN	PF02493	193 - 214	7.8e-06	MORN repeat
MORN	PF02493	216 - 237	4.9e-07	MORN repeat
PIP5K	PF01504	451 - 640	1.5e-76	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21980 AT1G77740 AT1G77740
fragaria_vesca	FvH4_2g26240 FvH4_2g26240
malus_domestica	MD08G1170300.v1.1 MD15G1357100.v1.1
prunus_persica	Prupe.1G504100_v2.0.a1
pyrus_communis	pycom08g14580 pycom15g31930
rosa_chinensis	RchiOBHm_Chr6g0294851
rosa_laevigata	RLG00000011837
rosa_multiflora	Rmu_sc0008966.1_g000020 Rmu_sc0029501.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172980
rosa_rugosa	Rorug06G0247100
rosa_samantha	Rh6AG360700 Rh6BG367400 Rh6CG374500
rosa_wichuraiana	Rw6G031470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	45
Acc65I	GGTACC	1 cut(s)	1755
AccB1I	GGYRCC	1 cut(s)	1755
AccBSI	CCGCTC	3 cut(s)	141, 1398, 2044
AccII	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
AcoI	YGGCCR	5 cut(s)	353, 541, 698, 1903, 1993
AcsI	RAATTY	6 cut(s)	380, 829, 1519, 1535, 1793, 2286
AcuI	CTGAAG	1 cut(s)	1730
AcvI	CACGTG	1 cut(s)	696
AcyI	GRCGYC	1 cut(s)	42
AfaI	GTAC	9 cut(s)	278, 302, 440, 554, 578, 647, 1139, 1757, 2075
AfeI	AGCGCT	1 cut(s)	488
AfiI	CCNNNNNNNGG	9 cut(s)	82, 145, 223, 779, 994, 1229, 1420, 1568, 2085
AflIII	ACRYGT	3 cut(s)	435, 555, 1503
AgsI	TTSAA	7 cut(s)	385, 742, 1030, 1124, 1958, 2229, 2297
AjnI	CCWGG	6 cut(s)	534, 543, 1214, 1387, 1758, 2080
AjuI	GAANNNNNNNTTGG	2 cut(s)	488, 520
Alw26I	GTCTC	1 cut(s)	1512
Ama87I	CYCGRG	3 cut(s)	331, 1070, 1679
Aor51HI	AGCGCT	1 cut(s)	488
ApeKI	GCWGC	9 cut(s)	97, 179, 182, 294, 711, 751, 1075, 1401, 2112
ApoI	RAATTY	6 cut(s)	380, 829, 1519, 1535, 1793, 2286
Asp718I	GGTACC	1 cut(s)	1755
AspLEI	GCGC	8 cut(s)	56, 91, 121, 365, 489, 1879, 1899, 1941
AspS9I	GGNCC	8 cut(s)	112, 478, 630, 812, 996, 1171, 1212, 1714
AsuC2I	CCSGG	5 cut(s)	116, 250, 1054, 1071, 1072
AsuHPI	GGTGA	3 cut(s)	941, 1875, 2129
AsuII	TTCGAA	1 cut(s)	1085
AvaI	CYCGRG	3 cut(s)	331, 1070, 1679
AvaII	GGWCC	3 cut(s)	1171, 1212, 1714
BaeGI	GKGCMC	1 cut(s)	1095
BalI	TGGCCA	1 cut(s)	1905
BamHI	GGATCC	4 cut(s)	266, 422, 1232, 2242
BanI	GGYRCC	1 cut(s)	1755
BarI	GAAGNNNNNNTAC	2 cut(s)	1950, 1982
BauI	CACGAG	2 cut(s)	77, 349
BbrPI	CACGTG	1 cut(s)	696
BbsI	GAAGAC	1 cut(s)	1583
BbvI	GCAGC	9 cut(s)	109, 166, 169, 281, 698, 763, 1087, 1413, 2124
BccI	CCATC	5 cut(s)	391, 469, 1588, 1847, 2041
BceAI	ACGGC	8 cut(s)	117, 192, 307, 340, 514, 556, 796, 799
BcgI	CGANNNNNNTGC	2 cut(s)	400, 434
BciT130I	CCWGG	6 cut(s)	536, 545, 1216, 1389, 1760, 2082
BcnI	CCSGG	5 cut(s)	116, 250, 1054, 1071, 1072
BcoDI	GTCTC	1 cut(s)	1512
BfaI	CTAG	1 cut(s)	1784
BfmI	CTRYAG	2 cut(s)	1161, 1332
BfoI	RGCGCY	3 cut(s)	122, 490, 1880
BlpI	GCTNAGC	1 cut(s)	1962
Bme18I	GGWCC	3 cut(s)	1171, 1212, 1714
BmeT110I	CYCGRG	3 cut(s)	331, 1070, 1679
BmgT120I	GGNCC	8 cut(s)	112, 478, 630, 812, 996, 1171, 1212, 1714
BmrI	ACTGGG	2 cut(s)	1136, 1176
BmsI	GCATC	4 cut(s)	210, 1101, 1354, 1470
BmuI	ACTGGG	2 cut(s)	1136, 1176
BoxI	GACNNNNGTC	2 cut(s)	1284, 1504
BpiI	GAAGAC	1 cut(s)	1583
BpmI	CTGGAG	2 cut(s)	518, 1371
Bpu10I	CCTNAGC	1 cut(s)	2014
Bpu1102I	GCTNAGC	1 cut(s)	1962
Bpu14I	TTCGAA	1 cut(s)	1085
BpuMI	CCSGG	5 cut(s)	116, 250, 1054, 1071, 1072
BsaAI	YACGTR	4 cut(s)	438, 556, 696, 1863
BsaBI	GATNNNNATC	1 cut(s)	1191
BsaHI	GRCGYC	1 cut(s)	42
BsaWI	WCCGGW	2 cut(s)	269, 987
BsaXI	ACNNNNNCTCC	4 cut(s)	881, 911, 1027, 1057
Bsc4I	CCNNNNNNNGG	9 cut(s)	82, 145, 223, 779, 994, 1229, 1420, 1568, 2085
Bse118I	RCCGGY	2 cut(s)	149, 998
Bse1I	ACTGG	2 cut(s)	1131, 1182
Bse8I	GATNNNNATC	1 cut(s)	1191
BseBI	CCWGG	6 cut(s)	536, 545, 1216, 1389, 1760, 2082
BseGI	GGATG	6 cut(s)	402, 480, 1429, 1485, 1652, 2052
BseJI	GATNNNNATC	1 cut(s)	1191
BseLI	CCNNNNNNNGG	9 cut(s)	82, 145, 223, 779, 994, 1229, 1420, 1568, 2085
BseMII	CTCAG	2 cut(s)	1433, 1953
BseNI	ACTGG	2 cut(s)	1131, 1182
BseRI	GAGGAG	3 cut(s)	95, 206, 1048
BseSI	GKGCMC	1 cut(s)	1095
BseXI	GCAGC	9 cut(s)	109, 166, 169, 281, 698, 763, 1087, 1413, 2124
BseYI	CCCAGC	1 cut(s)	935
Bsh1236I	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
Bsh1285I	CGRYCG	1 cut(s)	1009
BshNI	GGYRCC	1 cut(s)	1755
BsiEI	CGRYCG	1 cut(s)	1009
BsiHKCI	CYCGRG	3 cut(s)	331, 1070, 1679
BslFI	GGGAC	6 cut(s)	446, 656, 775, 1023, 1025, 1184
BslI	CCNNNNNNNGG	9 cut(s)	82, 145, 223, 779, 994, 1229, 1420, 1568, 2085
BsmAI	GTCTC	1 cut(s)	1512
BsmFI	GGGAC	6 cut(s)	446, 656, 775, 1023, 1025, 1184
BsoBI	CYCGRG	3 cut(s)	331, 1070, 1679
Bsp119I	TTCGAA	1 cut(s)	1085
Bsp1286I	GDGCHC	1 cut(s)	1095
Bsp1720I	GCTNAGC	1 cut(s)	1962
Bsp19I	CCATGG	1 cut(s)	1657
BspCNI	CTCAG	2 cut(s)	1432, 1954
BspFNI	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
BspHI	TCATGA	1 cut(s)	1434
BspMAI	CTGCAG	1 cut(s)	1336
BspQI	GCTCTTC	1 cut(s)	1388
BspT104I	TTCGAA	1 cut(s)	1085
BspT107I	GGYRCC	1 cut(s)	1755
BsrBI	CCGCTC	3 cut(s)	141, 1398, 2044
BsrFI	RCCGGY	2 cut(s)	149, 998
BsrI	ACTGG	2 cut(s)	1131, 1182
BssAI	RCCGGY	2 cut(s)	149, 998
BssNI	GRCGYC	1 cut(s)	42
BssSI	CACGAG	2 cut(s)	77, 349
BssT1I	CCWWGG	1 cut(s)	1657
Bst2BI	CACGAG	2 cut(s)	77, 349
Bst2UI	CCWGG	6 cut(s)	536, 545, 1216, 1389, 1760, 2082
Bst4CI	ACNGT	4 cut(s)	653, 929, 1286, 1447
Bst6I	CTCTTC	1 cut(s)	1388
BstACI	GRCGYC	1 cut(s)	42
BstBAI	YACGTR	4 cut(s)	438, 556, 696, 1863
BstBI	TTCGAA	1 cut(s)	1085
BstC8I	GCNNGC	7 cut(s)	143, 147, 151, 1155, 1347, 1742, 2031
BstDEI	CTNAG	4 cut(s)	1370, 1419, 1962, 2014
BstDSI	CCRYGG	2 cut(s)	442, 1657
BstENI	CCTNNNNNAGG	1 cut(s)	1418
BstF5I	GGATG	6 cut(s)	402, 480, 1429, 1485, 1652, 2052
BstFNI	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
BstH2I	RGCGCY	3 cut(s)	122, 490, 1880
BstHHI	GCGC	8 cut(s)	56, 91, 121, 365, 489, 1879, 1899, 1941
BstMAI	GTCTC	1 cut(s)	1512
BstMCI	CGRYCG	1 cut(s)	1009
BstMWI	GCNNNNNNNGC	8 cut(s)	97, 116, 138, 159, 185, 254, 486, 1771
BstNI	CCWGG	6 cut(s)	536, 545, 1216, 1389, 1760, 2082
BstNSI	RCATGY	5 cut(s)	301, 1157, 1507, 2029, 2198
BstPAI	GACNNNNGTC	2 cut(s)	1284, 1504
BstSFI	CTRYAG	2 cut(s)	1161, 1332
BstSLI	GKGCMC	1 cut(s)	1095
BstSNI	TACGTA	1 cut(s)	1863
BstUI	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
BstV1I	GCAGC	9 cut(s)	109, 166, 169, 281, 698, 763, 1087, 1413, 2124
BstV2I	GAAGAC	1 cut(s)	1583
BstX2I	RGATCY	7 cut(s)	226, 266, 422, 1232, 1327, 2007, 2242
BstYI	RGATCY	7 cut(s)	226, 266, 422, 1232, 1327, 2007, 2242
BtgI	CCRYGG	2 cut(s)	442, 1657
BtsCI	GGATG	6 cut(s)	402, 480, 1429, 1485, 1652, 2052
BtsI	GCAGTG	1 cut(s)	11
BtsIMutI	CAGTG	3 cut(s)	11, 662, 1189
Cac8I	GCNNGC	7 cut(s)	143, 147, 151, 1155, 1347, 1742, 2031
CciI	TCATGA	1 cut(s)	1434
CfoI	GCGC	8 cut(s)	56, 91, 121, 365, 489, 1879, 1899, 1941
Cfr10I	RCCGGY	2 cut(s)	149, 998
Cfr13I	GGNCC	8 cut(s)	112, 478, 630, 812, 996, 1171, 1212, 1714
Cfr42I	CCGCGG	1 cut(s)	445
Cfr9I	CCCGGG	1 cut(s)	1070
CseI	GACGC	3 cut(s)	22, 95, 151
CsiI	ACCWGGT	1 cut(s)	1214
Csp6I	GTAC	9 cut(s)	277, 301, 439, 553, 577, 646, 1138, 1756, 2074
CviAII	CATG	9 cut(s)	298, 1154, 1435, 1504, 1658, 1816, 1975, 2026, 2195
CviQI	GTAC	9 cut(s)	277, 301, 439, 553, 577, 646, 1138, 1756, 2074
DdeI	CTNAG	4 cut(s)	1370, 1419, 1962, 2014
EaeI	YGGCCR	5 cut(s)	353, 541, 698, 1903, 1993
Eam1104I	CTCTTC	1 cut(s)	1388
EarI	CTCTTC	1 cut(s)	1388
EciI	GGCGGA	7 cut(s)	203, 331, 473, 839, 902, 1212, 1584
Eco105I	TACGTA	1 cut(s)	1863
Eco130I	CCWWGG	1 cut(s)	1657
Eco147I	AGGCCT	1 cut(s)	329
Eco32I	GATATC	1 cut(s)	2176
Eco47I	GGWCC	3 cut(s)	1171, 1212, 1714
Eco47III	AGCGCT	1 cut(s)	488
Eco57I	CTGAAG	1 cut(s)	1730
Eco72I	CACGTG	1 cut(s)	696
Eco88I	CYCGRG	3 cut(s)	331, 1070, 1679
EcoNI	CCTNNNNNAGG	1 cut(s)	1418
EcoO109I	RGGNCCY	2 cut(s)	1171, 1714
EcoRI	GAATTC	1 cut(s)	380
EcoRII	CCWGG	6 cut(s)	534, 543, 1214, 1387, 1758, 2080
EcoRV	GATATC	1 cut(s)	2176
EcoT14I	CCWWGG	1 cut(s)	1657
EcoT22I	ATGCAT	1 cut(s)	2200
ErhI	CCWWGG	1 cut(s)	1657
FaeI	CATG	9 cut(s)	301, 1157, 1438, 1507, 1661, 1819, 1978, 2029, 2198
FaqI	GGGAC	6 cut(s)	446, 656, 775, 1023, 1025, 1184
FatI	CATG	9 cut(s)	297, 1153, 1434, 1503, 1657, 1815, 1974, 2025, 2194
FauI	CCCGC	4 cut(s)	437, 776, 1161, 1934
FokI	GGATG	6 cut(s)	409, 487, 1436, 1492, 1639, 2059
FspBI	CTAG	1 cut(s)	1784
GlaI	GCGC	8 cut(s)	55, 90, 120, 364, 488, 1878, 1898, 1940
GsaI	CCCAGC	1 cut(s)	939
GsuI	CTGGAG	2 cut(s)	518, 1371
HaeII	RGCGCY	3 cut(s)	122, 490, 1880
HgaI	GACGC	3 cut(s)	22, 95, 151
HhaI	GCGC	8 cut(s)	56, 91, 121, 365, 489, 1879, 1899, 1941
Hin1I	GRCGYC	1 cut(s)	42
Hin1II	CATG	9 cut(s)	301, 1157, 1438, 1507, 1661, 1819, 1978, 2029, 2198
Hin6I	GCGC	8 cut(s)	54, 89, 119, 363, 487, 1877, 1897, 1939
HinP1I	GCGC	8 cut(s)	54, 89, 119, 363, 487, 1877, 1897, 1939
HincII	GTYRAC	1 cut(s)	2218
HindII	GTYRAC	1 cut(s)	2218
HindIII	AAGCTT	1 cut(s)	2249
HinfI	GANTC	9 cut(s)	23, 194, 669, 745, 1013, 1036, 1431, 1812, 1913
HphI	GGTGA	3 cut(s)	941, 1875, 2129
Hpy166II	GTNNAC	3 cut(s)	865, 2076, 2218
Hpy8I	GTNNAC	3 cut(s)	865, 2076, 2218
HpyAV	CCTTC	9 cut(s)	299, 313, 395, 586, 781, 1270, 1705, 2049, 2115
HpyCH4III	ACNGT	4 cut(s)	653, 929, 1286, 1447
HpyCH4IV	ACGT	9 cut(s)	42, 437, 555, 579, 695, 717, 764, 896, 1862
HpyCH4V	TGCA	8 cut(s)	297, 1024, 1334, 1549, 1744, 2033, 2198, 2212
HpyF10VI	GCNNNNNNNGC	8 cut(s)	97, 116, 138, 159, 185, 254, 486, 1771
HpyF3I	CTNAG	4 cut(s)	1370, 1419, 1962, 2014
HpySE526I	ACGT	9 cut(s)	42, 437, 555, 579, 695, 717, 764, 896, 1862
Hsp92I	GRCGYC	1 cut(s)	42
Hsp92II	CATG	9 cut(s)	301, 1157, 1438, 1507, 1661, 1819, 1978, 2029, 2198
HspAI	GCGC	8 cut(s)	54, 89, 119, 363, 487, 1877, 1897, 1939
KpnI	GGTACC	1 cut(s)	1759
KroI	GCCGGC	1 cut(s)	149
KroNI	GCCGGC	1 cut(s)	151
KspI	CCGCGG	1 cut(s)	445
LguI	GCTCTTC	1 cut(s)	1388
LmnI	GCTCC	8 cut(s)	240, 708, 790, 879, 1057, 1375, 1762, 2018
Lsp1109I	GCAGC	9 cut(s)	109, 166, 169, 281, 698, 763, 1087, 1413, 2124
LweI	GCATC	4 cut(s)	210, 1101, 1354, 1470
MabI	ACCWGGT	1 cut(s)	1214
MaeI	CTAG	1 cut(s)	1784
MaeII	ACGT	9 cut(s)	42, 437, 555, 579, 695, 717, 764, 896, 1862
MaeIII	GTNAC	5 cut(s)	163, 680, 923, 1528, 2060
MbiI	CCGCTC	3 cut(s)	141, 1398, 2044
MboII	GAAGA	8 cut(s)	73, 754, 1075, 1112, 1374, 1405, 1588, 2295
MflI	RGATCY	7 cut(s)	226, 266, 422, 1232, 1327, 2007, 2242
MhlI	GDGCHC	1 cut(s)	1095
MlsI	TGGCCA	1 cut(s)	1905
MluNI	TGGCCA	1 cut(s)	1905
MlyI	GAGTC	4 cut(s)	203, 678, 1007, 1045
MmeI	TCCRAC	6 cut(s)	194, 374, 450, 707, 1260, 1816
Mox20I	TGGCCA	1 cut(s)	1905
Mph1103I	ATGCAT	1 cut(s)	2200
MroNI	GCCGGC	1 cut(s)	149
MscI	TGGCCA	1 cut(s)	1905
MseI	TTAA	4 cut(s)	756, 1176, 1440, 1725
MslI	CAYNNNNRTG	1 cut(s)	16
Msp20I	TGGCCA	1 cut(s)	1905
MspA1I	CMGCKG	4 cut(s)	100, 444, 2115, 2237
MvaI	CCWGG	6 cut(s)	536, 545, 1216, 1389, 1760, 2082
MvnI	CGCG	6 cut(s)	89, 162, 365, 444, 821, 1941
MwoI	GCNNNNNNNGC	8 cut(s)	97, 116, 138, 159, 185, 254, 486, 1771
NaeI	GCCGGC	1 cut(s)	151
NciI	CCSGG	5 cut(s)	116, 250, 1054, 1071, 1072
NcoI	CCATGG	1 cut(s)	1657
NgoMIV	GCCGGC	1 cut(s)	149
NlaIII	CATG	9 cut(s)	301, 1157, 1438, 1507, 1661, 1819, 1978, 2029, 2198
NmuCI	GTSAC	4 cut(s)	163, 923, 1528, 2060
NsiI	ATGCAT	1 cut(s)	2200
NspI	RCATGY	5 cut(s)	301, 1157, 1507, 2029, 2198
NspV	TTCGAA	1 cut(s)	1085
PaeI	GCATGC	1 cut(s)	1157
PagI	TCATGA	1 cut(s)	1434
PceI	AGGCCT	1 cut(s)	329
PciI	ACATGT	1 cut(s)	1503
PciSI	GCTCTTC	1 cut(s)	1388
PcsI	WCGNNNNNNNCGW	1 cut(s)	498
PdiI	GCCGGC	1 cut(s)	151
PfeI	GAWTC	5 cut(s)	23, 745, 1431, 1812, 1913
PfoI	TCCNGGA	1 cut(s)	534
Ple19I	CGATCG	1 cut(s)	1009
PleI	GAGTC	4 cut(s)	202, 677, 1007, 1044
PmaCI	CACGTG	1 cut(s)	696
PmlI	CACGTG	1 cut(s)	696
PpsI	GAGTC	4 cut(s)	202, 677, 1007, 1044
Ppu21I	YACGTR	4 cut(s)	438, 556, 696, 1863
PpuMI	RGGWCCY	2 cut(s)	1171, 1714
PscI	ACATGT	1 cut(s)	1503
PshAI	GACNNNNGTC	2 cut(s)	1284, 1504
Psp5II	RGGWCCY	2 cut(s)	1171, 1714
Psp6I	CCWGG	6 cut(s)	534, 543, 1214, 1387, 1758, 2080
PspCI	CACGTG	1 cut(s)	696
PspFI	CCCAGC	1 cut(s)	935
PspGI	CCWGG	6 cut(s)	534, 543, 1214, 1387, 1758, 2080
PspPI	GGNCC	8 cut(s)	112, 478, 630, 812, 996, 1171, 1212, 1714
PspPPI	RGGWCCY	2 cut(s)	1171, 1714
PstI	CTGCAG	1 cut(s)	1336
PsuI	RGATCY	7 cut(s)	226, 266, 422, 1232, 1327, 2007, 2242
PvuI	CGATCG	1 cut(s)	1009
PvuII	CAGCTG	2 cut(s)	100, 2237
RsaI	GTAC	9 cut(s)	278, 302, 440, 554, 578, 647, 1139, 1757, 2075
RsaNI	GTAC	9 cut(s)	277, 301, 439, 553, 577, 646, 1138, 1756, 2074
RseI	CAYNNNNRTG	1 cut(s)	16
SacII	CCGCGG	1 cut(s)	445
SapI	GCTCTTC	1 cut(s)	1388
SaqAI	TTAA	4 cut(s)	756, 1176, 1440, 1725
Sau96I	GGNCC	8 cut(s)	112, 478, 630, 812, 996, 1171, 1212, 1714
SchI	GAGTC	4 cut(s)	203, 678, 1007, 1045
SduI	GDGCHC	1 cut(s)	1095
SexAI	ACCWGGT	1 cut(s)	1214
SfaNI	GCATC	4 cut(s)	210, 1101, 1354, 1470
SfcI	CTRYAG	2 cut(s)	1161, 1332
Sfr303I	CCGCGG	1 cut(s)	445
SfuI	TTCGAA	1 cut(s)	1085
SgrBI	CCGCGG	1 cut(s)	445
SinI	GGWCC	3 cut(s)	1171, 1212, 1714
SmaI	CCCGGG	1 cut(s)	1072
SmiMI	CAYNNNNRTG	1 cut(s)	16
SnaBI	TACGTA	1 cut(s)	1863
SphI	GCATGC	1 cut(s)	1157
SseBI	AGGCCT	1 cut(s)	329
SspI	AATATT	1 cut(s)	690
SspMI	CTAG	1 cut(s)	1784
StuI	AGGCCT	1 cut(s)	329
StyI	CCWWGG	1 cut(s)	1657
TaaI	ACNGT	4 cut(s)	653, 929, 1286, 1447
TaiI	ACGT	9 cut(s)	45, 440, 558, 582, 698, 720, 767, 899, 1865
TaqI	TCGA	8 cut(s)	197, 204, 801, 1005, 1085, 1981, 2053, 2067
TatI	WGTACW	1 cut(s)	2073
TauI	GCSGC	9 cut(s)	94, 97, 113, 141, 162, 188, 824, 1249, 1401
TfiI	GAWTC	5 cut(s)	23, 745, 1431, 1812, 1913
Tru1I	TTAA	4 cut(s)	756, 1176, 1440, 1725
Tru9I	TTAA	4 cut(s)	756, 1176, 1440, 1725
TscAI	CASTG	3 cut(s)	18, 662, 1189
TseFI	GTSAC	4 cut(s)	163, 923, 1528, 2060
TseI	GCWGC	9 cut(s)	97, 179, 182, 294, 711, 751, 1075, 1401, 2112
Tsp45I	GTSAC	4 cut(s)	163, 923, 1528, 2060
TspDTI	ATGAA	8 cut(s)	1423, 1530, 1710, 1784, 1832, 1905, 2266, 2281
TspGWI	ACGGA	2 cut(s)	279, 699
TspMI	CCCGGG	1 cut(s)	1070
TspRI	CASTG	3 cut(s)	18, 662, 1189
VpaK11BI	GGWCC	3 cut(s)	1171, 1212, 1714
XagI	CCTNNNNNAGG	1 cut(s)	1418
XapI	RAATTY	6 cut(s)	380, 829, 1519, 1535, 1793, 2286
XbaI	TCTAGA	1 cut(s)	1783
XceI	RCATGY	5 cut(s)	301, 1157, 1507, 2029, 2198
XmaI	CCCGGG	1 cut(s)	1070
XspI	CTAG	1 cut(s)	1784
ZraI	GACGTC	1 cut(s)	43
Zsp2I	ATGCAT	1 cut(s)	2200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.