Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0010991

Physical Location & Seq

Genomic Coordinates Reverse (-)

55490958 .. 55494662

Gene Structure 3705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G031470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGCGTGAAGCACTGTTGTGTGAATCCCCAAGCGACGTCGTGTTGTGTGCCAAGAAGAAGAGGTCAGAGGACGAGGACGCGCCGCCGCAGCTCGTGGTTGCCGCCCCGGCGCTCTCCATTGGCCGGAGCCGATCTCAGGCGGGGACTCGCCGCGTCACTCCGACGACGACTACGACTACTACCACTACCACGGAGGTGGCGGTGCCGAGCATCGAGAGGTTTCTGCCGAACGGGGATCTCTACATCGGGAGCTTCGCCGGCTCGGTCCCGAACGGATCCGGTAAGTATCTGTGGACGGACGGGTGCATGTACGAGGGGGAGTGGCGGAAGGGCAAGGCCTCCGGGAAAGGGAAATTCTCGTGGCCGTCGGGCGCGACTTACGAGGGCGAATTCAAGTCGGGTCGGATGGAAGGGTACGGGACGTTTATCGGATCCGACGGTGACACGTACCGGGGGACGTGGTCGGCGGATCGGAAGCACGGGATTGGCCAGAAGCGCTACGCCAACGGCGATTTCTACGAGGGATCGTGGAAGAGGAACCTCCAGGACGGCCAAGGGAGGTACGTGTGGCAGAACGGCAACGAGTACGTCGGCGAGTGGAAGGCCGGAGTCATTTCGGGTCGGGGCGTTTTGATTTGGGCCAATGGGAACAAGTACGACGGCCAGTGGGAAAATGGAGTCCCCAAAGGCAACGGAATATTCACCTGGCCGGACGGCAGCTGCTACGTCGGTAGCTGGAACAAGGATTTGAAGATACAGCAGCTTAACGGCACGTTTTACCCGGCCAACGGCGGCAAGGAGCAGAACTTCGACAACATTGGGCCGTTCGCGGCGGAGAATTTGACGATAACGATGAGGAAACGGTCGTCGGTGGACGGAGCCAGAGGGAGCCTGGCGGAGAGGTCGTTTCCGAGGATTTGTATTTGGGAGAGCGACGGTGAGGCTGGGGATATTACTTGTGATATTATTGATAATGTGGAGGCTTCTATGTTCTACCGCAACGGCACGGCGTTCGATCGGGATTCGTTTATGCAGTTCAAGAGGAATCCCTGTTGCTTTTCCGGTGAGCCCAAGAAACCTGGCCAGCCCATTTCCAAAGGGCATAAGAACTACGATTTGATGCTCAATCTTCAACTGGGTATAAGGTACTCTATTGGGAAGCATGCTTCCATAGTGCGGGACCTTAAATCCAGTGATTTCGATCCCAAGGAGAAGTTCTGGACCAGGTTTCCGCCGGAGGGATCCAGCAAAACGCCGCCTCATCAGTCGTTTGAGTTCAGGTGGAAGGACTACTGTCCTATGGTGTTCAGGCGTTTGAGGGAGTTATTCCAAGTAGACCCTGCAGATTATATGCTGGCTATTTGTGGAAATGATGCTCTTAGGGAGCTTTCTTCTCCAGGGAAAAGCGGCAGCTTCTTTTACCTGACTCAGGATGATAGATTCATGATTAAGACTGTCAAAAAATCAGAAGTCAAGGTGCTAATAAGGATGCTTCCAAGTTATTATAGACATATGTCTCGGTATGAAAATTCTCTTGTCACTAAATTCTACGGGGTGCATTGTGTCAAACCTGTTGGGGGCCAGAAGACGAGGTTTATAGTGATGGGCAATTTGTTCTGCTCGGAGTATAGAATACATAGACGATTTGACCTGAAAGGATCTTCCCATGGTAGAACAACTGATAAGCCTGAGGGGGAGATTGATGAAATTACAACCCTGAAGGACCTTGATCTTAATTTTGTGTTTCGACTACAAGGAAAATGGTACCAGGAGCTTATGAAGCAAATTGATCTAGATTGTGAATTTTTGGAAGCAGAGAGAATCATGGATTATAGTCTTTTGGTTGGTCTTCATTTTTATGATGGCAATACGTATGACAAAATGGCGCTGTCACCTTTTCTCTTGCGCTCTGGCCAAAAGGATTCATTTCAGAATGAAAAGTTTATGCGCGGGTGTCGGTTTCTCGAAGCTGAGCTACAAGACATGGATCGAGTTTTGTCTGGCCGGAAGCCACGGATCTGCTTAGGAGCCAACATGCCTGCAAGGGCAGAGCGGATGGCTCGAAGGAGTGACTTCGATCAGTACACTCCTGGTGGGTTCAGTCATTTGACCCCTTCACGCAGCGGTGAAATCTATGATGTAGTTCTTTACTTCGGGATAATAGACATTTTACAAGACTATGATATCAGCAAGAAGTTAGAGCATGCATATAAATCCTTGCAAGTCGACCCGACTTCAATATCAGCTGTGGATCCCAAGCTTTACTCAAAGAGGTTCCGGGATTTCATTGGAAGAATTTTCATTGAAGACAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0003785 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008092 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009958 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016020 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0022414 GO:0022622 GO:0030258 GO:0032501 GO:0032502 GO:0040007 GO:0044237 GO:0044238 GO:0044255 GO:0044464 GO:0044877 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051015 GO:0071704 GO:0071944 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

771

Amino Acids

87.67

Weight (kDa)

8.75

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	104 - 125	3.4e-07	MORN repeat
MORN	PF02493	127 - 149	7.3e-06	MORN repeat
MORN	PF02493	173 - 194	6.9e-06	MORN repeat
MORN	PF02493	196 - 217	7.9e-06	MORN repeat
MORN	PF02493	219 - 240	5e-07	MORN repeat
PIP5K	PF01504	454 - 765	2.5e-102	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21980 AT1G77740 AT1G77740
fragaria_vesca	FvH4_2g26240 FvH4_2g26240
malus_domestica	MD08G1170300.v1.1 MD15G1357100.v1.1
prunus_persica	Prupe.1G504100_v2.0.a1
pyrus_communis	pycom08g14580 pycom15g31930
rosa_chinensis	RchiOBHm_Chr6g0294851
rosa_laevigata	RLG00000011837
rosa_multiflora	Rmu_sc0008966.1_g000020 Rmu_sc0029501.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172980
rosa_rugosa	Rorug06G0247100
rosa_samantha	Rh6AG360700 Rh6BG367400 Rh6CG374500
rosa_wichuraiana	Rw6G031470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
Acc65I	GGTACC	1 cut(s)	1764
AccB1I	GGYRCC	2 cut(s)	202, 1764
AccBSI	CCGCTC	1 cut(s)	2053
AccI	GTMKAC	2 cut(s)	1335, 2226
AccII	CGCG	5 cut(s)	80, 153, 374, 830, 1950
AcsI	RAATTY	7 cut(s)	353, 389, 838, 1528, 1544, 1802, 2295
AcuI	CTGAAG	1 cut(s)	1739
AcyI	GRCGYC	1 cut(s)	36
AfaI	GTAC	9 cut(s)	311, 416, 449, 563, 587, 656, 1148, 1766, 2084
AfeI	AGCGCT	1 cut(s)	497
AfiI	CCNNNNNNNGG	8 cut(s)	123, 136, 348, 788, 1176, 1238, 1429, 1577
AflIII	ACRYGT	2 cut(s)	444, 564
AgsI	TTSAA	6 cut(s)	394, 751, 1039, 1133, 2238, 2306
AjiI	CACGTC	1 cut(s)	459
AjnI	CCWGG	8 cut(s)	543, 704, 891, 1078, 1223, 1396, 1767, 2089
AjuI	GAANNNNNNNTTGG	4 cut(s)	497, 529, 1199, 1231
AleI	CACNNNNGTG	2 cut(s)	16, 194
Alw26I	GTCTC	1 cut(s)	1521
Aor51HI	AGCGCT	1 cut(s)	497
ApeKI	GCWGC	6 cut(s)	88, 717, 720, 760, 1410, 2121
ApoI	RAATTY	7 cut(s)	353, 389, 838, 1528, 1544, 1802, 2295
Asp718I	GGTACC	1 cut(s)	1764
AspLEI	GCGC	7 cut(s)	82, 112, 374, 498, 1888, 1908, 1950
AspS9I	GGNCC	7 cut(s)	265, 639, 821, 1180, 1221, 1579, 1723
AsuC2I	CCSGG	5 cut(s)	107, 343, 452, 782, 2279
AsuHPI	GGTGA	6 cut(s)	452, 694, 950, 1076, 1884, 2138
AvaII	GGWCC	4 cut(s)	265, 1180, 1221, 1723
AxyI	CCTNAGG	1 cut(s)	1689
BalI	TGGCCA	3 cut(s)	489, 1083, 1914
BamHI	GGATCC	4 cut(s)	275, 431, 1241, 2251
BanI	GGYRCC	2 cut(s)	202, 1764
BanII	GRGCYC	1 cut(s)	1071
BarI	GAAGNNNNNNTAC	2 cut(s)	1959, 1991
BauI	CACGAG	2 cut(s)	92, 358
BbsI	GAAGAC	2 cut(s)	1592, 1841
BbvI	GCAGC	6 cut(s)	100, 707, 729, 772, 1422, 2133
BccI	CCATC	4 cut(s)	400, 1597, 1856, 2050
BcgI	CGANNNNNNTGC	2 cut(s)	994, 1028
BciT130I	CCWGG	8 cut(s)	545, 706, 893, 1080, 1225, 1398, 1769, 2091
BcnI	CCSGG	5 cut(s)	107, 343, 452, 782, 2279
BcoDI	GTCTC	1 cut(s)	1521
BfaI	CTAG	1 cut(s)	1793
BfmI	CTRYAG	1 cut(s)	1341
BfoI	RGCGCY	3 cut(s)	113, 499, 1889
BglI	GCCNNNNNGGC	1 cut(s)	107
BlpI	GCTNAGC	1 cut(s)	1971
Bme18I	GGWCC	4 cut(s)	265, 1180, 1221, 1723
BmgBI	CACGTC	1 cut(s)	459
BmgT120I	GGNCC	7 cut(s)	265, 639, 821, 1180, 1221, 1579, 1723
BmrI	ACTGGG	1 cut(s)	1145
BmsI	GCATC	4 cut(s)	219, 1110, 1363, 1479
BmuI	ACTGGG	1 cut(s)	1145
BoxI	GACNNNNGTC	2 cut(s)	1293, 1513
BpiI	GAAGAC	2 cut(s)	1592, 1841
BplI	GAGNNNNNCTC	2 cut(s)	118, 150
BpmI	CTGGAG	2 cut(s)	527, 1380
Bpu10I	CCTNAGC	1 cut(s)	2023
Bpu1102I	GCTNAGC	1 cut(s)	1971
BpuMI	CCSGG	5 cut(s)	107, 343, 452, 782, 2279
BsaAI	YACGTR	3 cut(s)	447, 565, 1872
BsaBI	GATNNNNATC	1 cut(s)	1200
BsaHI	GRCGYC	1 cut(s)	36
BsaJI	CCNNGG	9 cut(s)	105, 189, 451, 553, 911, 1206, 1397, 1666, 2012
BsaWI	WCCGGW	2 cut(s)	278, 1061
BsaXI	ACNNNNNCTCC	2 cut(s)	890, 920
Bsc4I	CCNNNNNNNGG	8 cut(s)	123, 136, 348, 788, 1176, 1238, 1429, 1577
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	3 cut(s)	664, 1140, 1191
Bse21I	CCTNAGG	1 cut(s)	1689
Bse8I	GATNNNNATC	1 cut(s)	1200
BseBI	CCWGG	8 cut(s)	545, 706, 893, 1080, 1225, 1398, 1769, 2091
BseDI	CCNNGG	9 cut(s)	105, 189, 451, 553, 911, 1206, 1397, 1666, 2012
BseGI	GGATG	4 cut(s)	411, 1438, 1494, 2061
BseJI	GATNNNNATC	1 cut(s)	1200
BseLI	CCNNNNNNNGG	8 cut(s)	123, 136, 348, 788, 1176, 1238, 1429, 1577
BseMII	CTCAG	4 cut(s)	149, 1442, 1680, 1962
BseNI	ACTGG	3 cut(s)	664, 1140, 1191
BseXI	GCAGC	6 cut(s)	100, 707, 729, 772, 1422, 2133
BseYI	CCCAGC	1 cut(s)	944
Bsh1236I	CGCG	5 cut(s)	80, 153, 374, 830, 1950
Bsh1285I	CGRYCG	2 cut(s)	866, 1018
BshNI	GGYRCC	2 cut(s)	202, 1764
BsiEI	CGRYCG	2 cut(s)	866, 1018
BslFI	GGGAC	6 cut(s)	157, 251, 433, 469, 665, 1193
BslI	CCNNNNNNNGG	8 cut(s)	123, 136, 348, 788, 1176, 1238, 1429, 1577
BsmAI	GTCTC	1 cut(s)	1521
BsmFI	GGGAC	6 cut(s)	157, 251, 433, 469, 665, 1193
Bsp1286I	GDGCHC	1 cut(s)	1071
Bsp1720I	GCTNAGC	1 cut(s)	1971
Bsp19I	CCATGG	1 cut(s)	1666
BspCNI	CTCAG	4 cut(s)	148, 1441, 1681, 1963
BspFNI	CGCG	5 cut(s)	80, 153, 374, 830, 1950
BspHI	TCATGA	1 cut(s)	1443
BspMAI	CTGCAG	1 cut(s)	1345
BspT107I	GGYRCC	2 cut(s)	202, 1764
BsrBI	CCGCTC	1 cut(s)	2053
BsrFI	RCCGGY	1 cut(s)	257
BsrI	ACTGG	3 cut(s)	664, 1140, 1191
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	9 cut(s)	105, 189, 451, 553, 911, 1206, 1397, 1666, 2012
BssNI	GRCGYC	1 cut(s)	36
BssSI	CACGAG	2 cut(s)	92, 358
BssT1I	CCWWGG	3 cut(s)	553, 1206, 1666
Bst2BI	CACGAG	2 cut(s)	92, 358
Bst2UI	CCWGG	8 cut(s)	545, 706, 893, 1080, 1225, 1398, 1769, 2091
Bst4CI	ACNGT	6 cut(s)	15, 440, 864, 938, 1295, 1456
Bst6I	CTCTTC	2 cut(s)	53, 527
BstACI	GRCGYC	1 cut(s)	36
BstBAI	YACGTR	3 cut(s)	447, 565, 1872
BstC8I	GCNNGC	6 cut(s)	259, 1085, 1164, 1356, 2040, 2205
BstDEI	CTNAG	6 cut(s)	135, 1379, 1428, 1689, 1971, 2023
BstDSI	CCRYGG	3 cut(s)	189, 1666, 2012
BstENI	CCTNNNNNAGG	1 cut(s)	1427
BstF5I	GGATG	4 cut(s)	411, 1438, 1494, 2061
BstFNI	CGCG	5 cut(s)	80, 153, 374, 830, 1950
BstH2I	RGCGCY	3 cut(s)	113, 499, 1889
BstHHI	GCGC	7 cut(s)	82, 112, 374, 498, 1888, 1908, 1950
BstMAI	GTCTC	1 cut(s)	1521
BstMCI	CGRYCG	2 cut(s)	866, 1018
BstMWI	GCNNNNNNNGC	5 cut(s)	88, 107, 258, 495, 1780
BstNI	CCWGG	8 cut(s)	545, 706, 893, 1080, 1225, 1398, 1769, 2091
BstNSI	RCATGY	4 cut(s)	310, 1166, 2038, 2207
BstPAI	GACNNNNGTC	2 cut(s)	1293, 1513
BstSFI	CTRYAG	1 cut(s)	1341
BstSNI	TACGTA	1 cut(s)	1872
BstUI	CGCG	5 cut(s)	80, 153, 374, 830, 1950
BstV1I	GCAGC	6 cut(s)	100, 707, 729, 772, 1422, 2133
BstV2I	GAAGAC	2 cut(s)	1592, 1841
BstX2I	RGATCY	7 cut(s)	235, 275, 431, 1241, 1658, 2016, 2251
BstXI	CCANNNNNNTGG	1 cut(s)	196
BstYI	RGATCY	7 cut(s)	235, 275, 431, 1241, 1658, 2016, 2251
Bsu36I	CCTNAGG	1 cut(s)	1689
BtgI	CCRYGG	3 cut(s)	189, 1666, 2012
BtrI	CACGTC	1 cut(s)	459
BtsCI	GGATG	4 cut(s)	411, 1438, 1494, 2061
BtsIMutI	CAGTG	3 cut(s)	11, 671, 1198
Cac8I	GCNNGC	6 cut(s)	259, 1085, 1164, 1356, 2040, 2205
CciI	TCATGA	1 cut(s)	1443
CfoI	GCGC	7 cut(s)	82, 112, 374, 498, 1888, 1908, 1950
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	7 cut(s)	265, 639, 821, 1180, 1221, 1579, 1723
CseI	GACGC	2 cut(s)	86, 142
CsiI	ACCWGGT	1 cut(s)	1223
Csp6I	GTAC	9 cut(s)	310, 415, 448, 562, 586, 655, 1147, 1765, 2083
CviAII	CATG	8 cut(s)	307, 1163, 1444, 1667, 1825, 1984, 2035, 2204
CviQI	GTAC	9 cut(s)	310, 415, 448, 562, 586, 655, 1147, 1765, 2083
DdeI	CTNAG	6 cut(s)	135, 1379, 1428, 1689, 1971, 2023
Eam1104I	CTCTTC	2 cut(s)	53, 527
EarI	CTCTTC	2 cut(s)	53, 527
EciI	GGCGGA	5 cut(s)	340, 482, 848, 911, 1221
Eco105I	TACGTA	1 cut(s)	1872
Eco130I	CCWWGG	3 cut(s)	553, 1206, 1666
Eco147I	AGGCCT	1 cut(s)	338
Eco24I	GRGCYC	1 cut(s)	1071
Eco32I	GATATC	1 cut(s)	2185
Eco47I	GGWCC	4 cut(s)	265, 1180, 1221, 1723
Eco47III	AGCGCT	1 cut(s)	497
Eco57I	CTGAAG	1 cut(s)	1739
Eco81I	CCTNAGG	1 cut(s)	1689
EcoNI	CCTNNNNNAGG	1 cut(s)	1427
EcoO109I	RGGNCCY	2 cut(s)	1180, 1723
EcoRI	GAATTC	1 cut(s)	389
EcoRII	CCWGG	8 cut(s)	543, 704, 891, 1078, 1223, 1396, 1767, 2089
EcoRV	GATATC	1 cut(s)	2185
EcoT14I	CCWWGG	3 cut(s)	553, 1206, 1666
EcoT22I	ATGCAT	1 cut(s)	2209
EcoT38I	GRGCYC	1 cut(s)	1071
ErhI	CCWWGG	3 cut(s)	553, 1206, 1666
FaeI	CATG	8 cut(s)	310, 1166, 1447, 1670, 1828, 1987, 2038, 2207
FaqI	GGGAC	6 cut(s)	157, 251, 433, 469, 665, 1193
FatI	CATG	8 cut(s)	306, 1162, 1443, 1666, 1824, 1983, 2034, 2203
FauI	CCCGC	3 cut(s)	133, 1170, 1943
FauNDI	CATATG	1 cut(s)	1512
FblI	GTMKAC	2 cut(s)	1335, 2226
FokI	GGATG	4 cut(s)	418, 1445, 1501, 2068
FriOI	GRGCYC	1 cut(s)	1071
FspBI	CTAG	1 cut(s)	1793
GlaI	GCGC	7 cut(s)	81, 111, 373, 497, 1887, 1907, 1949
GsaI	CCCAGC	1 cut(s)	948
GsuI	CTGGAG	2 cut(s)	527, 1380
HaeII	RGCGCY	3 cut(s)	113, 499, 1889
HgaI	GACGC	2 cut(s)	86, 142
HhaI	GCGC	7 cut(s)	82, 112, 374, 498, 1888, 1908, 1950
Hin1I	GRCGYC	1 cut(s)	36
Hin1II	CATG	8 cut(s)	310, 1166, 1447, 1670, 1828, 1987, 2038, 2207
Hin6I	GCGC	7 cut(s)	80, 110, 372, 496, 1886, 1906, 1948
HinP1I	GCGC	7 cut(s)	80, 110, 372, 496, 1886, 1906, 1948
HincII	GTYRAC	1 cut(s)	2227
HindII	GTYRAC	1 cut(s)	2227
HindIII	AAGCTT	1 cut(s)	2258
HphI	GGTGA	6 cut(s)	452, 694, 950, 1076, 1884, 2138
Hpy166II	GTNNAC	5 cut(s)	294, 874, 1336, 2085, 2227
Hpy8I	GTNNAC	5 cut(s)	294, 874, 1336, 2085, 2227
HpyAV	CCTTC	7 cut(s)	322, 404, 595, 1279, 1714, 2058, 2124
HpyCH4III	ACNGT	6 cut(s)	15, 440, 864, 938, 1295, 1456
HpyCH4IV	ACGT	9 cut(s)	36, 422, 446, 458, 564, 588, 726, 773, 1871
HpyCH4V	TGCA	7 cut(s)	306, 1033, 1343, 1558, 2042, 2207, 2221
HpyF10VI	GCNNNNNNNGC	5 cut(s)	88, 107, 258, 495, 1780
HpyF3I	CTNAG	6 cut(s)	135, 1379, 1428, 1689, 1971, 2023
HpySE526I	ACGT	9 cut(s)	36, 422, 446, 458, 564, 588, 726, 773, 1871
Hsp92I	GRCGYC	1 cut(s)	36
Hsp92II	CATG	8 cut(s)	310, 1166, 1447, 1670, 1828, 1987, 2038, 2207
HspAI	GCGC	7 cut(s)	80, 110, 372, 496, 1886, 1906, 1948
KpnI	GGTACC	1 cut(s)	1768
KroI	GCCGGC	1 cut(s)	257
KroNI	GCCGGC	1 cut(s)	259
LmnI	GCTCC	8 cut(s)	126, 249, 799, 878, 888, 1384, 1771, 2027
Lsp1109I	GCAGC	6 cut(s)	100, 707, 729, 772, 1422, 2133
LweI	GCATC	4 cut(s)	219, 1110, 1363, 1479
MabI	ACCWGGT	1 cut(s)	1223
MaeI	CTAG	1 cut(s)	1793
MaeII	ACGT	9 cut(s)	36, 422, 446, 458, 564, 588, 726, 773, 1871
MaeIII	GTNAC	5 cut(s)	154, 440, 1537, 1890, 2069
MbiI	CCGCTC	1 cut(s)	2053
MflI	RGATCY	7 cut(s)	235, 275, 431, 1241, 1658, 2016, 2251
MhlI	GDGCHC	1 cut(s)	1071
MlsI	TGGCCA	3 cut(s)	489, 1083, 1914
MluNI	TGGCCA	3 cut(s)	489, 1083, 1914
MlyI	GAGTC	4 cut(s)	139, 618, 687, 1420
MmeI	TCCRAC	3 cut(s)	185, 383, 459
Mox20I	TGGCCA	3 cut(s)	489, 1083, 1914
Mph1103I	ATGCAT	1 cut(s)	2209
MroNI	GCCGGC	1 cut(s)	257
MscI	TGGCCA	3 cut(s)	489, 1083, 1914
MseI	TTAA	4 cut(s)	765, 1185, 1449, 1734
MslI	CAYNNNNRTG	3 cut(s)	16, 194, 1857
Msp20I	TGGCCA	3 cut(s)	489, 1083, 1914
MspA1I	CMGCKG	3 cut(s)	720, 2124, 2246
MvaI	CCWGG	8 cut(s)	545, 706, 893, 1080, 1225, 1398, 1769, 2091
MvnI	CGCG	5 cut(s)	80, 153, 374, 830, 1950
MwoI	GCNNNNNNNGC	5 cut(s)	88, 107, 258, 495, 1780
NaeI	GCCGGC	1 cut(s)	259
NciI	CCSGG	5 cut(s)	107, 343, 452, 782, 2279
NcoI	CCATGG	1 cut(s)	1666
NdeI	CATATG	1 cut(s)	1512
NgoMIV	GCCGGC	1 cut(s)	257
NlaIII	CATG	8 cut(s)	310, 1166, 1447, 1670, 1828, 1987, 2038, 2207
NmeAIII	GCCGAG	1 cut(s)	231
NmuCI	GTSAC	5 cut(s)	154, 440, 1537, 1890, 2069
NsiI	ATGCAT	1 cut(s)	2209
NspI	RCATGY	4 cut(s)	310, 1166, 2038, 2207
OliI	CACNNNNGTG	2 cut(s)	16, 194
PaeI	GCATGC	2 cut(s)	1166, 2207
PagI	TCATGA	1 cut(s)	1443
PceI	AGGCCT	1 cut(s)	338
PcsI	WCGNNNNNNNCGW	2 cut(s)	170, 507
PdiI	GCCGGC	1 cut(s)	259
PfeI	GAWTC	6 cut(s)	23, 1022, 1045, 1440, 1821, 1922
PflFI	GACNNNGTC	1 cut(s)	460
PfoI	TCCNGGA	3 cut(s)	341, 543, 2277
Ple19I	CGATCG	1 cut(s)	1018
PleI	GAGTC	4 cut(s)	139, 617, 686, 1420
PpsI	GAGTC	4 cut(s)	139, 617, 686, 1420
Ppu21I	YACGTR	3 cut(s)	447, 565, 1872
PpuMI	RGGWCCY	2 cut(s)	1180, 1723
PshAI	GACNNNNGTC	2 cut(s)	1293, 1513
Psp5II	RGGWCCY	2 cut(s)	1180, 1723
Psp6I	CCWGG	8 cut(s)	543, 704, 891, 1078, 1223, 1396, 1767, 2089
PspFI	CCCAGC	1 cut(s)	944
PspGI	CCWGG	8 cut(s)	543, 704, 891, 1078, 1223, 1396, 1767, 2089
PspPI	GGNCC	7 cut(s)	265, 639, 821, 1180, 1221, 1579, 1723
PspPPI	RGGWCCY	2 cut(s)	1180, 1723
PstI	CTGCAG	1 cut(s)	1345
PsuI	RGATCY	7 cut(s)	235, 275, 431, 1241, 1658, 2016, 2251
PsyI	GACNNNGTC	1 cut(s)	460
PvuI	CGATCG	1 cut(s)	1018
PvuII	CAGCTG	2 cut(s)	720, 2246
RsaI	GTAC	9 cut(s)	311, 416, 449, 563, 587, 656, 1148, 1766, 2084
RsaNI	GTAC	9 cut(s)	310, 415, 448, 562, 586, 655, 1147, 1765, 2083
RseI	CAYNNNNRTG	3 cut(s)	16, 194, 1857
SalI	GTCGAC	1 cut(s)	2225
SaqAI	TTAA	4 cut(s)	765, 1185, 1449, 1734
Sau96I	GGNCC	7 cut(s)	265, 639, 821, 1180, 1221, 1579, 1723
SchI	GAGTC	4 cut(s)	139, 618, 687, 1420
SduI	GDGCHC	1 cut(s)	1071
SexAI	ACCWGGT	1 cut(s)	1223
SfaNI	GCATC	4 cut(s)	219, 1110, 1363, 1479
SfcI	CTRYAG	1 cut(s)	1341
SinI	GGWCC	4 cut(s)	265, 1180, 1221, 1723
SmiMI	CAYNNNNRTG	3 cut(s)	16, 194, 1857
SnaBI	TACGTA	1 cut(s)	1872
SphI	GCATGC	2 cut(s)	1166, 2207
SseBI	AGGCCT	1 cut(s)	338
SspI	AATATT	1 cut(s)	699
SspMI	CTAG	1 cut(s)	1793
StuI	AGGCCT	1 cut(s)	338
StyI	CCWWGG	3 cut(s)	553, 1206, 1666
TaaI	ACNGT	6 cut(s)	15, 440, 864, 938, 1295, 1456
TaiI	ACGT	9 cut(s)	39, 425, 449, 461, 567, 591, 729, 776, 1874
TaqII	GACCGA	1 cut(s)	253
TatI	WGTACW	1 cut(s)	2082
TauI	GCSGC	8 cut(s)	85, 88, 104, 153, 795, 833, 1258, 1410
TfiI	GAWTC	6 cut(s)	23, 1022, 1045, 1440, 1821, 1922
Tru1I	TTAA	4 cut(s)	765, 1185, 1449, 1734
Tru9I	TTAA	4 cut(s)	765, 1185, 1449, 1734
TscAI	CASTG	3 cut(s)	18, 671, 1198
TseFI	GTSAC	5 cut(s)	154, 440, 1537, 1890, 2069
TseI	GCWGC	6 cut(s)	88, 717, 720, 760, 1410, 2121
Tsp45I	GTSAC	5 cut(s)	154, 440, 1537, 1890, 2069
TspDTI	ATGAA	9 cut(s)	1432, 1539, 1719, 1793, 1841, 1914, 1950, 2275, 2290
TspGWI	ACGGA	6 cut(s)	206, 288, 311, 708, 891, 2029
TspRI	CASTG	3 cut(s)	18, 671, 1198
Tth111I	GACNNNGTC	1 cut(s)	460
VpaK11BI	GGWCC	4 cut(s)	265, 1180, 1221, 1723
XagI	CCTNNNNNAGG	1 cut(s)	1427
XapI	RAATTY	7 cut(s)	353, 389, 838, 1528, 1544, 1802, 2295
XbaI	TCTAGA	1 cut(s)	1792
XceI	RCATGY	4 cut(s)	310, 1166, 2038, 2207
XcmI	CCANNNNNNNNNTGG	2 cut(s)	671, 889
XmiI	GTMKAC	2 cut(s)	1335, 2226
XspI	CTAG	1 cut(s)	1793
ZraI	GACGTC	1 cut(s)	37
Zsp2I	ATGCAT	1 cut(s)	2209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.