Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0010991

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG374500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGCGTGAAGCACTGTTGTGTGAATCCCCAAGCGACGTCGTGTTGTGTGCCAAGAAGAAGAGGTCAGAGGACGAGGAGGCGCCGCCGCAGCTCGTGGTTGCCGCCCCGGCGCTCTCCATTGGCCGGAGCCGATCTCAGGCGGGGACTCGCCGCGTCACTCCGACGACGACGACGACGACGACGACGACGACTACTAGCACGGAGGTGGCGGTGCCGAGCATCGAGAGGTTTCTGCCGAACGGGGATCTCTACATCGGGAGCTTCGCCGGCTCGGTCCCGAACGGATCCGGTAAGTATCTGTGGACGGACGGGTGCATGTACGAGGGGGAGTGGCGGAAGGGCAAGGCCTCCGGGAAAGGGAAATTCTCGTGGCCGTCGGGCGCGACTTACGAGGGCGAATTCAAGTCGGGTCGGATGGAAGGGTACGGGACGTTTATCGGATCCGACGGCGACACGTACCGGGGGACGTGGTCGGCGGATCGGAAGCACGGGATGGGCCAGAAGCGCTACGCCAACGGCGATTTCTACGAGGGATCGTGGAAGAGGAACCTCCAGGACGGCCAGGGGAGGTACGTGTGGCAGAACGGCAACGAGTACGTCGGCGAGTGGAAGGCCGGAGTCATTTCGGGTCGGGGCGTTTTGATTTGGGCCAATGGGAACAAGTACGACGGCCAGTGGGAAAATGGAGTCCCCAAAGGCAACGGAATATTCACCTGGCCTGACGGCAGCTGCTACGTCGGTTGCTGGAACAAGGATTTGAAGATACAGCAGCTTAACGGCACGTTTTACCCCGCCAACGGCGGCAAGGAGCAGAACTTCGACAACATTGGGCCGTTCGCGGCGGAGAATTTGACGATAACGATGAGGAAACGGTCGTCGGTGGACGGAGCTAGAGGGAGCCTGGCGGAGAGGTCGTTTCCGAGGATTTGTATTTGGGAGAGCGACGGTGAGGCTGGGGATATTACTTGTGATATTATTGATAATGTGGAGGCTTCTATGTTCTACCGCAACGGCACGGCGTTCGATCGGGATTCGTTTATGCAGTTCAAGAGGAATCCCTGTTGCTTTTCCGGCGAGCCCAAGAAACCTGGCCAGCCCATTTCCAAAGGGCATAAGAACTACGATTTGATGCTCAATCTTCAATTGGGTATAAGGTACTCTATTGGGAAGCATGCTTCCATAGTGCGGGACCTTAAATCCAGTGATTTCGATCCGAAGGAGAAGTTCTGGACCAGGTTTCCGCCGGAGGGATCCAGCAAAACGCCGCCTCATCAATCGTTTGAGTTCAGGTGGAAGGACTACTGTCCTATGGTGTTCAGGCGTTTGAGGGAGTTATTCCAAGTAGACCCTGCAGATTATATGCTGGCTATTTGTGGAAATGATGCTCTTAGGGAGCTTTCTTCTCCAGGGAAAAGCGGCAGCTTCTTTTACCTGACTCAGGATGATAGATTCATGATTAAGACTGTCAAAAAATCAGAAGTCAAGGTGCTAATAAGGATGCTTCCAAGTTATTATAGACATATGTCTCGGTATGAAAATTCTCTTGTCACTAAATTCTACGGGGTGCATTGTGTCAAACCTGTTGGGGGCCAGAAGACAAGGTTTATAGTGATGGGCAATTTGTTCTGCTCGGAGTATAGAATACATAGACGATTTGACTTGAAAGGATCTTCCCATGGTAGAACAACTGATAAGCCTGAGGGGGAGATTGATGAAATTACAACCCTGAAGGACCTTGATCTTAATTTTGTGTTTCGACTACAAGGAAAATGGTACCAGGAGCTTATGAAGCAAATTGATCTGGATTGTGAATTTTTGGAAGCAGAGAGAATCATGGATTATAGTCTTTTGGTTGGTCTTCATTTTTATGATGGCAATACGTATGACAAAATGGCGCTGTCACCTTTTCTCTTGCGCTCTGGCCAAAAGGATTCATTTCAGAATGAAAAGTTTATGCGCGGGTGTCGGTTTCTCGAAGCTGAGCTACAAGACATGGATCGAGTTTTGTCTGGCCGGAAGCCACGGATCTGCCTAGGAGCCAACATGCCTGCAAGGGCAGAGCGGATGGCTCGAAGGAGTGACTTCGATCAGTACACCCCTGGTGGGTTCAGTCATTTGACCCCTTCACGCAGCGGTGAAATCTATGATGTAGTTCTTTACTTCGGGATAATAGACATTTTACAAGACTATGATATCAGCAAGAAGTTAGAGCATGCATATAAATCCTTGCAAGTCGACCCGACTTCAATATCAGCTGTGGATCCCAAGCTTTACTCAAAGAGGTTCCGGGATTTCATTGGAAGAATTTTCATTGAAGACAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003779 GO:0003785 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0007275 GO:0008092 GO:0008150 GO:0008152 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009958 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016020 GO:0016301 GO:0016307 GO:0016308 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0022414 GO:0022622 GO:0030258 GO:0032501 GO:0032502 GO:0040007 GO:0044237 GO:0044238 GO:0044255 GO:0044464 GO:0044877 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050896 GO:0051015 GO:0071704 GO:0071944 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04011 ko04070 ko04072 ko04139 ko04144 ko04666 ko04810 ko05231 map00562 map01100 map04011 map04070 map04072 map04139 map04144 map04666 map04810 map05231

Pfam Domains

Protein Families

MORN PIP5K

Protein Analysis

774

Amino Acids

88.01

Weight (kDa)

8.73

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MORN	PF02493	107 - 128	3.4e-07	MORN repeat
MORN	PF02493	130 - 152	7.3e-06	MORN repeat
MORN	PF02493	176 - 197	6.9e-06	MORN repeat
MORN	PF02493	199 - 220	8e-06	MORN repeat
MORN	PF02493	222 - 243	5e-07	MORN repeat
PIP5K	PF01504	457 - 768	2.6e-102	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21980 AT1G77740 AT1G77740
fragaria_vesca	FvH4_2g26240 FvH4_2g26240
malus_domestica	MD08G1170300.v1.1 MD15G1357100.v1.1
prunus_persica	Prupe.1G504100_v2.0.a1
pyrus_communis	pycom08g14580 pycom15g31930
rosa_chinensis	RchiOBHm_Chr6g0294851
rosa_laevigata	RLG00000011837
rosa_multiflora	Rmu_sc0008966.1_g000020 Rmu_sc0029501.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172980
rosa_rugosa	Rorug06G0247100
rosa_samantha	Rh6AG360700 Rh6BG367400 Rh6CG374500
rosa_wichuraiana	Rw6G031470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	39
Acc65I	GGTACC	1 cut(s)	1773
AccB1I	GGYRCC	3 cut(s)	79, 211, 1773
AccBSI	CCGCTC	1 cut(s)	2062
AccI	GTMKAC	2 cut(s)	1344, 2235
AccII	CGCG	4 cut(s)	153, 383, 839, 1959
AcoI	YGGCCR	7 cut(s)	121, 371, 559, 670, 1090, 1921, 2011
AcsI	RAATTY	7 cut(s)	362, 398, 847, 1537, 1553, 1811, 2304
AcuI	CTGAAG	1 cut(s)	1748
AcyI	GRCGYC	2 cut(s)	36, 80
AfaI	GTAC	9 cut(s)	320, 425, 458, 572, 596, 665, 1157, 1775, 2093
AfeI	AGCGCT	1 cut(s)	506
AfiI	CCNNNNNNNGG	9 cut(s)	123, 136, 357, 797, 1185, 1247, 1438, 1586, 2103
AflIII	ACRYGT	2 cut(s)	453, 573
AgsI	TTSAA	7 cut(s)	403, 760, 1048, 1142, 1663, 2247, 2315
AjiI	CACGTC	1 cut(s)	468
AjnI	CCWGG	9 cut(s)	552, 561, 713, 900, 1087, 1232, 1405, 1776, 2098
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
AleI	CACNNNNGTG	2 cut(s)	16, 203
Alw26I	GTCTC	1 cut(s)	1530
Aor51HI	AGCGCT	1 cut(s)	506
ApeKI	GCWGC	6 cut(s)	88, 726, 729, 769, 1419, 2130
ApoI	RAATTY	7 cut(s)	362, 398, 847, 1537, 1553, 1811, 2304
Asp718I	GGTACC	1 cut(s)	1773
AspA2I	CCTAGG	1 cut(s)	2032
AspLEI	GCGC	7 cut(s)	82, 112, 383, 507, 1897, 1917, 1959
AspS9I	GGNCC	8 cut(s)	274, 496, 648, 830, 1189, 1230, 1588, 1732
AsuC2I	CCSGG	4 cut(s)	107, 352, 461, 2288
AsuHPI	GGTGA	4 cut(s)	703, 959, 1893, 2147
AvaII	GGWCC	4 cut(s)	274, 1189, 1230, 1732
AvrII	CCTAGG	1 cut(s)	2032
AxyI	CCTNAGG	1 cut(s)	1698
BalI	TGGCCA	2 cut(s)	1092, 1923
BamHI	GGATCC	4 cut(s)	284, 440, 1250, 2260
BanI	GGYRCC	3 cut(s)	79, 211, 1773
BanII	GRGCYC	1 cut(s)	1080
BarI	GAAGNNNNNNTAC	2 cut(s)	1968, 2000
BauI	CACGAG	2 cut(s)	92, 367
BbsI	GAAGAC	2 cut(s)	1601, 1850
BbvI	GCAGC	6 cut(s)	100, 716, 738, 781, 1431, 2142
BccI	CCATC	5 cut(s)	409, 487, 1606, 1865, 2059
BcgI	CGANNNNNNTGC	2 cut(s)	1003, 1037
BciT130I	CCWGG	9 cut(s)	554, 563, 715, 902, 1089, 1234, 1407, 1778, 2100
BcnI	CCSGG	4 cut(s)	107, 352, 461, 2288
BcoDI	GTCTC	1 cut(s)	1530
BfaI	CTAG	3 cut(s)	195, 891, 2033
BfmI	CTRYAG	1 cut(s)	1350
BfoI	RGCGCY	4 cut(s)	83, 113, 508, 1898
BglI	GCCNNNNNGGC	1 cut(s)	107
BlnI	CCTAGG	1 cut(s)	2032
BlpI	GCTNAGC	1 cut(s)	1980
Bme18I	GGWCC	4 cut(s)	274, 1189, 1230, 1732
BmgBI	CACGTC	1 cut(s)	468
BmgT120I	GGNCC	8 cut(s)	274, 496, 648, 830, 1189, 1230, 1588, 1732
BmsI	GCATC	4 cut(s)	228, 1119, 1372, 1488
BoxI	GACNNNNGTC	2 cut(s)	1302, 1522
BpiI	GAAGAC	2 cut(s)	1601, 1850
BplI	GAGNNNNNCTC	2 cut(s)	118, 150
BpmI	CTGGAG	2 cut(s)	536, 1389
Bpu1102I	GCTNAGC	1 cut(s)	1980
BpuMI	CCSGG	4 cut(s)	107, 352, 461, 2288
BsaAI	YACGTR	3 cut(s)	456, 574, 1881
BsaBI	GATNNNNATC	1 cut(s)	1209
BsaHI	GRCGYC	2 cut(s)	36, 80
BsaJI	CCNNGG	9 cut(s)	105, 460, 562, 920, 1406, 1675, 2021, 2032, 2098
BsaWI	WCCGGW	1 cut(s)	287
BsaXI	ACNNNNNCTCC	2 cut(s)	899, 929
Bsc4I	CCNNNNNNNGG	9 cut(s)	123, 136, 357, 797, 1185, 1247, 1438, 1586, 2103
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	2 cut(s)	673, 1200
Bse21I	CCTNAGG	1 cut(s)	1698
Bse8I	GATNNNNATC	1 cut(s)	1209
BseBI	CCWGG	9 cut(s)	554, 563, 715, 902, 1089, 1234, 1407, 1778, 2100
BseDI	CCNNGG	9 cut(s)	105, 460, 562, 920, 1406, 1675, 2021, 2032, 2098
BseGI	GGATG	5 cut(s)	420, 498, 1447, 1503, 2070
BseJI	GATNNNNATC	1 cut(s)	1209
BseLI	CCNNNNNNNGG	9 cut(s)	123, 136, 357, 797, 1185, 1247, 1438, 1586, 2103
BseMII	CTCAG	4 cut(s)	149, 1451, 1689, 1971
BseNI	ACTGG	2 cut(s)	673, 1200
BseRI	GAGGAG	1 cut(s)	89
BseXI	GCAGC	6 cut(s)	100, 716, 738, 781, 1431, 2142
BseYI	CCCAGC	1 cut(s)	953
Bsh1236I	CGCG	4 cut(s)	153, 383, 839, 1959
Bsh1285I	CGRYCG	2 cut(s)	875, 1027
BshNI	GGYRCC	3 cut(s)	79, 211, 1773
BsiEI	CGRYCG	2 cut(s)	875, 1027
BslFI	GGGAC	6 cut(s)	157, 260, 442, 478, 674, 1202
BslI	CCNNNNNNNGG	9 cut(s)	123, 136, 357, 797, 1185, 1247, 1438, 1586, 2103
BsmAI	GTCTC	1 cut(s)	1530
BsmFI	GGGAC	6 cut(s)	157, 260, 442, 478, 674, 1202
Bsp1286I	GDGCHC	1 cut(s)	1080
Bsp1720I	GCTNAGC	1 cut(s)	1980
Bsp19I	CCATGG	1 cut(s)	1675
BspCNI	CTCAG	4 cut(s)	148, 1450, 1690, 1972
BspFNI	CGCG	4 cut(s)	153, 383, 839, 1959
BspHI	TCATGA	1 cut(s)	1452
BspMAI	CTGCAG	1 cut(s)	1354
BspT107I	GGYRCC	3 cut(s)	79, 211, 1773
BsrBI	CCGCTC	1 cut(s)	2062
BsrFI	RCCGGY	1 cut(s)	266
BsrI	ACTGG	2 cut(s)	673, 1200
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	9 cut(s)	105, 460, 562, 920, 1406, 1675, 2021, 2032, 2098
BssNI	GRCGYC	2 cut(s)	36, 80
BssSI	CACGAG	2 cut(s)	92, 367
BssT1I	CCWWGG	2 cut(s)	1675, 2032
Bst2BI	CACGAG	2 cut(s)	92, 367
Bst2UI	CCWGG	9 cut(s)	554, 563, 715, 902, 1089, 1234, 1407, 1778, 2100
Bst4CI	ACNGT	5 cut(s)	15, 873, 947, 1304, 1465
Bst6I	CTCTTC	2 cut(s)	53, 536
BstACI	GRCGYC	2 cut(s)	36, 80
BstBAI	YACGTR	3 cut(s)	456, 574, 1881
BstC8I	GCNNGC	7 cut(s)	268, 1076, 1094, 1173, 1365, 2049, 2214
BstDEI	CTNAG	5 cut(s)	135, 1388, 1437, 1698, 1980
BstDSI	CCRYGG	2 cut(s)	1675, 2021
BstENI	CCTNNNNNAGG	1 cut(s)	1436
BstF5I	GGATG	5 cut(s)	420, 498, 1447, 1503, 2070
BstFNI	CGCG	4 cut(s)	153, 383, 839, 1959
BstH2I	RGCGCY	4 cut(s)	83, 113, 508, 1898
BstHHI	GCGC	7 cut(s)	82, 112, 383, 507, 1897, 1917, 1959
BstMAI	GTCTC	1 cut(s)	1530
BstMCI	CGRYCG	2 cut(s)	875, 1027
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 107, 267, 504, 1071, 1789
BstNI	CCWGG	9 cut(s)	554, 563, 715, 902, 1089, 1234, 1407, 1778, 2100
BstNSI	RCATGY	4 cut(s)	319, 1175, 2047, 2216
BstPAI	GACNNNNGTC	2 cut(s)	1302, 1522
BstSFI	CTRYAG	1 cut(s)	1350
BstSNI	TACGTA	1 cut(s)	1881
BstUI	CGCG	4 cut(s)	153, 383, 839, 1959
BstV1I	GCAGC	6 cut(s)	100, 716, 738, 781, 1431, 2142
BstV2I	GAAGAC	2 cut(s)	1601, 1850
BstX2I	RGATCY	7 cut(s)	244, 284, 440, 1250, 1667, 2025, 2260
BstYI	RGATCY	7 cut(s)	244, 284, 440, 1250, 1667, 2025, 2260
Bsu36I	CCTNAGG	1 cut(s)	1698
BtgI	CCRYGG	2 cut(s)	1675, 2021
BtrI	CACGTC	1 cut(s)	468
BtsCI	GGATG	5 cut(s)	420, 498, 1447, 1503, 2070
BtsIMutI	CAGTG	3 cut(s)	11, 680, 1207
Cac8I	GCNNGC	7 cut(s)	268, 1076, 1094, 1173, 1365, 2049, 2214
CciI	TCATGA	1 cut(s)	1452
CfoI	GCGC	7 cut(s)	82, 112, 383, 507, 1897, 1917, 1959
Cfr10I	RCCGGY	1 cut(s)	266
Cfr13I	GGNCC	8 cut(s)	274, 496, 648, 830, 1189, 1230, 1588, 1732
CseI	GACGC	1 cut(s)	142
CsiI	ACCWGGT	1 cut(s)	1232
Csp6I	GTAC	9 cut(s)	319, 424, 457, 571, 595, 664, 1156, 1774, 2092
CviAII	CATG	8 cut(s)	316, 1172, 1453, 1676, 1834, 1993, 2044, 2213
CviQI	GTAC	9 cut(s)	319, 424, 457, 571, 595, 664, 1156, 1774, 2092
DdeI	CTNAG	5 cut(s)	135, 1388, 1437, 1698, 1980
DinI	GGCGCC	1 cut(s)	81
EaeI	YGGCCR	7 cut(s)	121, 371, 559, 670, 1090, 1921, 2011
Eam1104I	CTCTTC	2 cut(s)	53, 536
EarI	CTCTTC	2 cut(s)	53, 536
EciI	GGCGGA	5 cut(s)	349, 491, 857, 920, 1230
Eco105I	TACGTA	1 cut(s)	1881
Eco130I	CCWWGG	2 cut(s)	1675, 2032
Eco147I	AGGCCT	1 cut(s)	347
Eco24I	GRGCYC	1 cut(s)	1080
Eco32I	GATATC	1 cut(s)	2194
Eco47I	GGWCC	4 cut(s)	274, 1189, 1230, 1732
Eco47III	AGCGCT	1 cut(s)	506
Eco57I	CTGAAG	1 cut(s)	1748
Eco81I	CCTNAGG	1 cut(s)	1698
EcoNI	CCTNNNNNAGG	1 cut(s)	1436
EcoO109I	RGGNCCY	2 cut(s)	1189, 1732
EcoRI	GAATTC	1 cut(s)	398
EcoRII	CCWGG	9 cut(s)	552, 561, 713, 900, 1087, 1232, 1405, 1776, 2098
EcoRV	GATATC	1 cut(s)	2194
EcoT14I	CCWWGG	2 cut(s)	1675, 2032
EcoT22I	ATGCAT	1 cut(s)	2218
EcoT38I	GRGCYC	1 cut(s)	1080
EgeI	GGCGCC	1 cut(s)	81
EheI	GGCGCC	1 cut(s)	81
ErhI	CCWWGG	2 cut(s)	1675, 2032
FaeI	CATG	8 cut(s)	319, 1175, 1456, 1679, 1837, 1996, 2047, 2216
FaqI	GGGAC	6 cut(s)	157, 260, 442, 478, 674, 1202
FatI	CATG	8 cut(s)	315, 1171, 1452, 1675, 1833, 1992, 2043, 2212
FauI	CCCGC	4 cut(s)	133, 799, 1179, 1952
FauNDI	CATATG	1 cut(s)	1521
FblI	GTMKAC	2 cut(s)	1344, 2235
FokI	GGATG	5 cut(s)	427, 505, 1454, 1510, 2077
FriOI	GRGCYC	1 cut(s)	1080
FspBI	CTAG	3 cut(s)	195, 891, 2033
GlaI	GCGC	7 cut(s)	81, 111, 382, 506, 1896, 1916, 1958
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	2 cut(s)	536, 1389
HaeII	RGCGCY	4 cut(s)	83, 113, 508, 1898
HgaI	GACGC	1 cut(s)	142
HhaI	GCGC	7 cut(s)	82, 112, 383, 507, 1897, 1917, 1959
Hin1I	GRCGYC	2 cut(s)	36, 80
Hin1II	CATG	8 cut(s)	319, 1175, 1456, 1679, 1837, 1996, 2047, 2216
Hin6I	GCGC	7 cut(s)	80, 110, 381, 505, 1895, 1915, 1957
HinP1I	GCGC	7 cut(s)	80, 110, 381, 505, 1895, 1915, 1957
HincII	GTYRAC	1 cut(s)	2236
HindII	GTYRAC	1 cut(s)	2236
HindIII	AAGCTT	1 cut(s)	2267
HphI	GGTGA	4 cut(s)	703, 959, 1893, 2147
Hpy166II	GTNNAC	5 cut(s)	303, 883, 1345, 2094, 2236
Hpy8I	GTNNAC	5 cut(s)	303, 883, 1345, 2094, 2236
HpyAV	CCTTC	8 cut(s)	331, 413, 604, 1210, 1288, 1723, 2067, 2133
HpyCH4III	ACNGT	5 cut(s)	15, 873, 947, 1304, 1465
HpyCH4IV	ACGT	9 cut(s)	36, 431, 455, 467, 573, 597, 735, 782, 1880
HpyCH4V	TGCA	7 cut(s)	315, 1042, 1352, 1567, 2051, 2216, 2230
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 107, 267, 504, 1071, 1789
HpyF3I	CTNAG	5 cut(s)	135, 1388, 1437, 1698, 1980
HpySE526I	ACGT	9 cut(s)	36, 431, 455, 467, 573, 597, 735, 782, 1880
Hsp92I	GRCGYC	2 cut(s)	36, 80
Hsp92II	CATG	8 cut(s)	319, 1175, 1456, 1679, 1837, 1996, 2047, 2216
HspAI	GCGC	7 cut(s)	80, 110, 381, 505, 1895, 1915, 1957
KasI	GGCGCC	1 cut(s)	79
KpnI	GGTACC	1 cut(s)	1777
KroI	GCCGGC	1 cut(s)	266
KroNI	GCCGGC	1 cut(s)	268
LmnI	GCTCC	8 cut(s)	126, 258, 808, 887, 897, 1393, 1780, 2036
Lsp1109I	GCAGC	6 cut(s)	100, 716, 738, 781, 1431, 2142
LweI	GCATC	4 cut(s)	228, 1119, 1372, 1488
MabI	ACCWGGT	1 cut(s)	1232
MaeI	CTAG	3 cut(s)	195, 891, 2033
MaeII	ACGT	9 cut(s)	36, 431, 455, 467, 573, 597, 735, 782, 1880
MaeIII	GTNAC	4 cut(s)	154, 1546, 1899, 2078
MbiI	CCGCTC	1 cut(s)	2062
MfeI	CAATTG	1 cut(s)	1142
MflI	RGATCY	7 cut(s)	244, 284, 440, 1250, 1667, 2025, 2260
MhlI	GDGCHC	1 cut(s)	1080
MlsI	TGGCCA	2 cut(s)	1092, 1923
MluNI	TGGCCA	2 cut(s)	1092, 1923
Mly113I	GGCGCC	1 cut(s)	80
MlyI	GAGTC	4 cut(s)	139, 627, 696, 1429
MmeI	TCCRAC	3 cut(s)	185, 392, 468
Mox20I	TGGCCA	2 cut(s)	1092, 1923
Mph1103I	ATGCAT	1 cut(s)	2218
MroNI	GCCGGC	1 cut(s)	266
MscI	TGGCCA	2 cut(s)	1092, 1923
MseI	TTAA	4 cut(s)	774, 1194, 1458, 1743
MslI	CAYNNNNRTG	3 cut(s)	16, 203, 1866
Msp20I	TGGCCA	2 cut(s)	1092, 1923
MspA1I	CMGCKG	3 cut(s)	729, 2133, 2255
MunI	CAATTG	1 cut(s)	1142
MvaI	CCWGG	9 cut(s)	554, 563, 715, 902, 1089, 1234, 1407, 1778, 2100
MvnI	CGCG	4 cut(s)	153, 383, 839, 1959
MwoI	GCNNNNNNNGC	6 cut(s)	88, 107, 267, 504, 1071, 1789
NaeI	GCCGGC	1 cut(s)	268
NarI	GGCGCC	1 cut(s)	80
NciI	CCSGG	4 cut(s)	107, 352, 461, 2288
NcoI	CCATGG	1 cut(s)	1675
NdeI	CATATG	1 cut(s)	1521
NgoMIV	GCCGGC	1 cut(s)	266
NlaIII	CATG	8 cut(s)	319, 1175, 1456, 1679, 1837, 1996, 2047, 2216
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	4 cut(s)	154, 1546, 1899, 2078
NsiI	ATGCAT	1 cut(s)	2218
NspI	RCATGY	4 cut(s)	319, 1175, 2047, 2216
OliI	CACNNNNGTG	2 cut(s)	16, 203
PaeI	GCATGC	2 cut(s)	1175, 2216
PagI	TCATGA	1 cut(s)	1452
PceI	AGGCCT	1 cut(s)	347
PcsI	WCGNNNNNNNCGW	7 cut(s)	170, 173, 176, 179, 182, 185, 516
PdiI	GCCGGC	1 cut(s)	268
PfeI	GAWTC	6 cut(s)	23, 1031, 1054, 1449, 1830, 1931
PflFI	GACNNNGTC	1 cut(s)	469
PfoI	TCCNGGA	3 cut(s)	350, 552, 2286
Ple19I	CGATCG	1 cut(s)	1027
PleI	GAGTC	4 cut(s)	139, 626, 695, 1429
PluTI	GGCGCC	1 cut(s)	83
PpsI	GAGTC	4 cut(s)	139, 626, 695, 1429
Ppu21I	YACGTR	3 cut(s)	456, 574, 1881
PpuMI	RGGWCCY	2 cut(s)	1189, 1732
PshAI	GACNNNNGTC	2 cut(s)	1302, 1522
Psp5II	RGGWCCY	2 cut(s)	1189, 1732
Psp6I	CCWGG	9 cut(s)	552, 561, 713, 900, 1087, 1232, 1405, 1776, 2098
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	9 cut(s)	552, 561, 713, 900, 1087, 1232, 1405, 1776, 2098
PspPI	GGNCC	8 cut(s)	274, 496, 648, 830, 1189, 1230, 1588, 1732
PspPPI	RGGWCCY	2 cut(s)	1189, 1732
PstI	CTGCAG	1 cut(s)	1354
PsuI	RGATCY	7 cut(s)	244, 284, 440, 1250, 1667, 2025, 2260
PsyI	GACNNNGTC	1 cut(s)	469
PvuI	CGATCG	1 cut(s)	1027
PvuII	CAGCTG	2 cut(s)	729, 2255
RsaI	GTAC	9 cut(s)	320, 425, 458, 572, 596, 665, 1157, 1775, 2093
RsaNI	GTAC	9 cut(s)	319, 424, 457, 571, 595, 664, 1156, 1774, 2092
RseI	CAYNNNNRTG	3 cut(s)	16, 203, 1866
SalI	GTCGAC	1 cut(s)	2234
SaqAI	TTAA	4 cut(s)	774, 1194, 1458, 1743
Sau96I	GGNCC	8 cut(s)	274, 496, 648, 830, 1189, 1230, 1588, 1732
SchI	GAGTC	4 cut(s)	139, 627, 696, 1429
SduI	GDGCHC	1 cut(s)	1080
SexAI	ACCWGGT	1 cut(s)	1232
SfaNI	GCATC	4 cut(s)	228, 1119, 1372, 1488
SfcI	CTRYAG	1 cut(s)	1350
SfoI	GGCGCC	1 cut(s)	81
SinI	GGWCC	4 cut(s)	274, 1189, 1230, 1732
SmiMI	CAYNNNNRTG	3 cut(s)	16, 203, 1866
SnaBI	TACGTA	1 cut(s)	1881
SphI	GCATGC	2 cut(s)	1175, 2216
SseBI	AGGCCT	1 cut(s)	347
SspDI	GGCGCC	1 cut(s)	79
SspI	AATATT	1 cut(s)	708
SspMI	CTAG	3 cut(s)	195, 891, 2033
StuI	AGGCCT	1 cut(s)	347
StyI	CCWWGG	2 cut(s)	1675, 2032
TaaI	ACNGT	5 cut(s)	15, 873, 947, 1304, 1465
TaiI	ACGT	9 cut(s)	39, 434, 458, 470, 576, 600, 738, 785, 1883
TaqII	GACCGA	1 cut(s)	262
TatI	WGTACW	1 cut(s)	2091
TauI	GCSGC	8 cut(s)	85, 88, 104, 153, 804, 842, 1267, 1419
TfiI	GAWTC	6 cut(s)	23, 1031, 1054, 1449, 1830, 1931
Tru1I	TTAA	4 cut(s)	774, 1194, 1458, 1743
Tru9I	TTAA	4 cut(s)	774, 1194, 1458, 1743
TscAI	CASTG	3 cut(s)	18, 680, 1207
TseFI	GTSAC	4 cut(s)	154, 1546, 1899, 2078
TseI	GCWGC	6 cut(s)	88, 726, 729, 769, 1419, 2130
Tsp45I	GTSAC	4 cut(s)	154, 1546, 1899, 2078
TspDTI	ATGAA	9 cut(s)	1441, 1548, 1728, 1802, 1850, 1923, 1959, 2284, 2299
TspGWI	ACGGA	6 cut(s)	215, 297, 320, 717, 900, 2038
TspRI	CASTG	3 cut(s)	18, 680, 1207
Tth111I	GACNNNGTC	1 cut(s)	469
VpaK11BI	GGWCC	4 cut(s)	274, 1189, 1230, 1732
XagI	CCTNNNNNAGG	1 cut(s)	1436
XapI	RAATTY	7 cut(s)	362, 398, 847, 1537, 1553, 1811, 2304
XceI	RCATGY	4 cut(s)	319, 1175, 2047, 2216
XcmI	CCANNNNNNNNNTGG	1 cut(s)	680
XmaJI	CCTAGG	1 cut(s)	2032
XmiI	GTMKAC	2 cut(s)	1344, 2235
XspI	CTAG	3 cut(s)	195, 891, 2033
ZraI	GACGTC	1 cut(s)	37
Zsp2I	ATGCAT	1 cut(s)	2218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.