FvH4_3g01740

Peptidase inhibitor I9

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
896142 .. 897214
1073 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g01740.t1

Sequence Viewer

Length: 291 bp
ATGGAAAATACAAAGATCGAATCATACTATTGTTTCATGAACTATGATCCTCAATACGCTCTCCTTCGATCTAATCAAAGAAAGAAAGGGAGGTCAGATGAGCTGGACATGTATCTGAGCCGGAAGCATGATGAGGTTTTGGAAAGCACCCTCGAACCAGGAACTTACAGGAAGACAGAGTCTCTTGTTATTGTAGATGGCTTTGCTGTGGAAATTACTGAGGACCAGGCGAGTAAGCTTAGATCTGCAAAGGGAGTGAGAGTAGTTGAGAAAAACGAAGAGATTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.16

Weight (kDa)

5.22

Isoelectric Point (pI)

55.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016279)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 41
AflIII ACRYGT 1 cut(s) 108
AjnI CCWGG 2 cut(s) 157, 225
AluBI AGCT 2 cut(s) 103, 238
AluI AGCT 2 cut(s) 103, 238
Alw26I GTCTC 1 cut(s) 186
AlwI GGATC 1 cut(s) 41
AspS9I GGNCC 1 cut(s) 223
AvaII GGWCC 1 cut(s) 223
BbsI GAAGAC 1 cut(s) 179
BccI CCATC 1 cut(s) 191
BcgI CGANNNNNNTGC 1 cut(s) 266
BciT130I CCWGG 2 cut(s) 159, 227
BcoDI GTCTC 1 cut(s) 186
BglII AGATCT 1 cut(s) 242
Bme1390I CCNGG 2 cut(s) 159, 227
Bme18I GGWCC 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 223
BmrFI CCNGG 2 cut(s) 159, 227
BpiI GAAGAC 1 cut(s) 179
BsaXI ACNNNNNCTCC 2 cut(s) 246, 276
BseBI CCWGG 2 cut(s) 159, 227
BseMII CTCAG 2 cut(s) 107, 210
BsiSI CCGG 1 cut(s) 121
BsmAI GTCTC 1 cut(s) 186
Bsp143I GATC 4 cut(s) 15, 46, 68, 242
BspCNI CTCAG 2 cut(s) 108, 211
BspHI TCATGA 1 cut(s) 36
BspPI GGATC 1 cut(s) 41
BssMI GATC 4 cut(s) 15, 46, 68, 242
Bst2UI CCWGG 2 cut(s) 159, 227
Bst6I CTCTTC 1 cut(s) 273
BstDEI CTNAG 3 cut(s) 116, 219, 239
BstKTI GATC 4 cut(s) 18, 49, 71, 245
BstMAI GTCTC 1 cut(s) 186
BstMBI GATC 4 cut(s) 15, 46, 68, 242
BstNI CCWGG 2 cut(s) 159, 227
BstNSI RCATGY 1 cut(s) 112
BstSCI CCNGG 2 cut(s) 157, 225
BstV2I GAAGAC 1 cut(s) 179
BstX2I RGATCY 1 cut(s) 242
BstYI RGATCY 1 cut(s) 242
CciI TCATGA 1 cut(s) 36
Cfr13I GGNCC 1 cut(s) 223
CviAII CATG 3 cut(s) 37, 109, 128
CviJI RGCY 4 cut(s) 103, 120, 201, 238
CviKI_1 RGCY 4 cut(s) 103, 120, 201, 238
DdeI CTNAG 3 cut(s) 116, 219, 239
DpnI GATC 4 cut(s) 17, 48, 70, 244
DpnII GATC 4 cut(s) 15, 46, 68, 242
Eam1104I CTCTTC 1 cut(s) 273
EarI CTCTTC 1 cut(s) 273
Eco47I GGWCC 1 cut(s) 223
EcoRII CCWGG 2 cut(s) 157, 225
FaeI CATG 3 cut(s) 40, 112, 131
FaiI YATR 5 cut(s) 25, 38, 45, 110, 129
FatI CATG 3 cut(s) 36, 108, 127
HapII CCGG 1 cut(s) 121
Hin1II CATG 3 cut(s) 40, 112, 131
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 2 cut(s) 20, 179
HpaII CCGG 1 cut(s) 121
Hpy188I TCNGA 2 cut(s) 97, 117
Hpy188III TCNNGA 1 cut(s) 37
HpyAV CCTTC 1 cut(s) 74
HpyCH4V TGCA 1 cut(s) 248
HpyF3I CTNAG 3 cut(s) 116, 219, 239
Hsp92II CATG 3 cut(s) 40, 112, 131
Kzo9I GATC 4 cut(s) 15, 46, 68, 242
LpnPI CCDG 7 cut(s) 89, 134, 144, 154, 171, 212, 239
MalI GATC 4 cut(s) 17, 48, 70, 244
MboI GATC 4 cut(s) 15, 46, 68, 242
MboII GAAGA 2 cut(s) 184, 290
MflI RGATCY 1 cut(s) 242
MluCI AATT 1 cut(s) 213
MlyI GAGTC 1 cut(s) 188
MnlI CCTC 5 cut(s) 60, 84, 127, 161, 214
MseI TTAA 1 cut(s) 289
MspI CCGG 1 cut(s) 121
MspR9I CCNGG 2 cut(s) 159, 227
MvaI CCWGG 2 cut(s) 159, 227
NdeII GATC 4 cut(s) 15, 46, 68, 242
NlaIII CATG 3 cut(s) 40, 112, 131
NspI RCATGY 1 cut(s) 112
PagI TCATGA 1 cut(s) 36
PciI ACATGT 1 cut(s) 108
PfeI GAWTC 1 cut(s) 20
PflFI GACNNNGTC 1 cut(s) 178
PleI GAGTC 1 cut(s) 187
PpsI GAGTC 1 cut(s) 187
PscI ACATGT 1 cut(s) 108
Psp6I CCWGG 2 cut(s) 157, 225
PspGI CCWGG 2 cut(s) 157, 225
PspPI GGNCC 1 cut(s) 223
PsuI RGATCY 1 cut(s) 242
PsyI GACNNNGTC 1 cut(s) 178
SaqAI TTAA 1 cut(s) 289
Sau3AI GATC 4 cut(s) 15, 46, 68, 242
Sau96I GGNCC 1 cut(s) 223
SchI GAGTC 1 cut(s) 188
ScrFI CCNGG 2 cut(s) 159, 227
SetI ASST 4 cut(s) 95, 105, 138, 240
SinI GGWCC 1 cut(s) 223
Sse9I AATT 1 cut(s) 213
StyD4I CCNGG 2 cut(s) 157, 225
TaqI TCGA 3 cut(s) 18, 67, 153
TasI AATT 1 cut(s) 213
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 1 cut(s) 289
Tru9I TTAA 1 cut(s) 289
TspDTI ATGAA 2 cut(s) 25, 53
Tth111I GACNNNGTC 1 cut(s) 178
VpaK11BI GGWCC 1 cut(s) 223
XceI RCATGY 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.