Rh7AG148300

Peptidase inhibitor I9

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0016279
Physical Location & Seq
Forward (+)
12021856 .. 12023360
1505 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG148300.1

Sequence Viewer

Length: 294 bp
ATGGAAAATACAAAAAGCGAATCATACTTTGTTTTCATGAATTATGATCCTCAATATGCTCGCCTTCGATCTGATCGAAAGAAAGGGACGTCAAATGAGCTTGATCTGTATCTAAGCCGGAAGCATGATGAGCTATTGGAAAGCACCCTTGAACCAGGAAGTTACAGGAAGACATTGTCTCTGGTTATTGTTGATGGTTTTGCTGTGGAAATTACTGAGGACCAGGTCGATCTCTGTGAACACACACACACACACACACAAACACACACAAACATACGTAATATGCAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Inhibitor_I9

Protein Analysis

97

Amino Acids

11.43

Weight (kDa)

5.43

Isoelectric Point (pI)

26.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016279)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g01740 FvH4_5g04420 FvH4_5g04420 FvH4_5g04420
malus_domestica MD06G1104700.v1.1 MD14G1123400.v1.1
prunus_persica Prupe.5G117300_v2.0.a1
pyrus_communis pycom06g09920
rosa_chinensis RchiOBHm_Chr7g0195121
rosa_multiflora Rmu_sc0002381.1_g000027
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148300 Rh7BG149100 Rh7CG152500
rosa_wichuraiana Rw7G012660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 92
AclWI GGATC 1 cut(s) 41
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 1 cut(s) 290
AgsI TTSAA 1 cut(s) 152
AjnI CCWGG 2 cut(s) 154, 222
AluBI AGCT 2 cut(s) 100, 133
AluI AGCT 2 cut(s) 100, 133
Alw26I GTCTC 1 cut(s) 183
AlwI GGATC 1 cut(s) 41
AspS9I GGNCC 1 cut(s) 220
AvaII GGWCC 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 176
BccI CCATC 1 cut(s) 188
BciT130I CCWGG 2 cut(s) 156, 224
BcoDI GTCTC 1 cut(s) 183
BmcAI AGTACT 1 cut(s) 290
Bme1390I CCNGG 2 cut(s) 156, 224
Bme18I GGWCC 1 cut(s) 220
BmgT120I GGNCC 1 cut(s) 220
BmrFI CCNGG 2 cut(s) 156, 224
BpiI GAAGAC 1 cut(s) 176
BsaAI YACGTR 1 cut(s) 278
BsaBI GATNNNNATC 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 89
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 2 cut(s) 156, 224
BseJI GATNNNNATC 1 cut(s) 108
BseMII CTCAG 1 cut(s) 207
BsiSI CCGG 1 cut(s) 118
BslFI GGGAC 1 cut(s) 100
BsmAI GTCTC 1 cut(s) 183
BsmFI GGGAC 1 cut(s) 100
Bsp143I GATC 5 cut(s) 46, 68, 73, 103, 229
BspCNI CTCAG 1 cut(s) 208
BspHI TCATGA 1 cut(s) 36
BspPI GGATC 1 cut(s) 41
BssMI GATC 5 cut(s) 46, 68, 73, 103, 229
BssNI GRCGYC 1 cut(s) 89
Bst2UI CCWGG 2 cut(s) 156, 224
BstACI GRCGYC 1 cut(s) 89
BstBAI YACGTR 1 cut(s) 278
BstC8I GCNNGC 1 cut(s) 61
BstDEI CTNAG 2 cut(s) 113, 216
BstKTI GATC 5 cut(s) 49, 71, 76, 106, 232
BstMAI GTCTC 1 cut(s) 183
BstMBI GATC 5 cut(s) 46, 68, 73, 103, 229
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstNI CCWGG 2 cut(s) 156, 224
BstSCI CCNGG 2 cut(s) 154, 222
BstSNI TACGTA 1 cut(s) 278
BstV2I GAAGAC 1 cut(s) 176
Cac8I GCNNGC 1 cut(s) 61
CciI TCATGA 1 cut(s) 36
Cfr13I GGNCC 1 cut(s) 220
CsiI ACCWGGT 1 cut(s) 222
Csp6I GTAC 1 cut(s) 289
CviAII CATG 2 cut(s) 37, 125
CviJI RGCY 3 cut(s) 100, 117, 133
CviKI_1 RGCY 3 cut(s) 100, 117, 133
CviQI GTAC 1 cut(s) 289
DdeI CTNAG 2 cut(s) 113, 216
DpnI GATC 5 cut(s) 48, 70, 75, 105, 231
DpnII GATC 5 cut(s) 46, 68, 73, 103, 229
Eco105I TACGTA 1 cut(s) 278
Eco47I GGWCC 1 cut(s) 220
EcoRII CCWGG 2 cut(s) 154, 222
FaeI CATG 2 cut(s) 40, 128
FaiI YATR 7 cut(s) 25, 38, 45, 57, 126, 275, 284
FaqI GGGAC 1 cut(s) 100
FatI CATG 2 cut(s) 36, 124
HapII CCGG 1 cut(s) 118
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 2 cut(s) 40, 128
HinfI GANTC 1 cut(s) 20
HpaII CCGG 1 cut(s) 118
Hpy166II GTNNAC 1 cut(s) 239
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 1 cut(s) 37
Hpy8I GTNNAC 1 cut(s) 239
HpyAV CCTTC 1 cut(s) 74
HpyCH4IV ACGT 2 cut(s) 89, 277
HpyCH4V TGCA 1 cut(s) 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
HpyF3I CTNAG 2 cut(s) 113, 216
HpySE526I ACGT 2 cut(s) 89, 277
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 2 cut(s) 40, 128
Kzo9I GATC 5 cut(s) 46, 68, 73, 103, 229
LpnPI CCDG 7 cut(s) 131, 141, 151, 167, 168, 209, 236
MabI ACCWGGT 1 cut(s) 222
MaeII ACGT 2 cut(s) 89, 277
MaeIII GTNAC 1 cut(s) 161
MalI GATC 5 cut(s) 48, 70, 75, 105, 231
MboI GATC 5 cut(s) 46, 68, 73, 103, 229
MboII GAAGA 1 cut(s) 181
MluCI AATT 2 cut(s) 40, 210
MnlI CCTC 2 cut(s) 60, 211
MspI CCGG 1 cut(s) 118
MspR9I CCNGG 2 cut(s) 156, 224
MvaI CCWGG 2 cut(s) 156, 224
MwoI GCNNNNNNNGC 1 cut(s) 130
NdeII GATC 5 cut(s) 46, 68, 73, 103, 229
NlaIII CATG 2 cut(s) 40, 128
PagI TCATGA 1 cut(s) 36
PcsI WCGNNNNNNNCGW 1 cut(s) 73
PfeI GAWTC 1 cut(s) 20
PflFI GACNNNGTC 2 cut(s) 175, 224
Ppu21I YACGTR 1 cut(s) 278
Psp6I CCWGG 2 cut(s) 154, 222
PspGI CCWGG 2 cut(s) 154, 222
PspPI GGNCC 1 cut(s) 220
PsyI GACNNNGTC 2 cut(s) 175, 224
RsaI GTAC 1 cut(s) 290
RsaNI GTAC 1 cut(s) 289
Sau3AI GATC 5 cut(s) 46, 68, 73, 103, 229
Sau96I GGNCC 1 cut(s) 220
ScaI AGTACT 1 cut(s) 290
ScrFI CCNGG 2 cut(s) 156, 224
SetI ASST 5 cut(s) 92, 102, 135, 228, 280
SexAI ACCWGGT 1 cut(s) 222
SinI GGWCC 1 cut(s) 220
SnaBI TACGTA 1 cut(s) 278
Sse9I AATT 2 cut(s) 40, 210
StyD4I CCNGG 2 cut(s) 154, 222
TaiI ACGT 2 cut(s) 92, 280
TaqI TCGA 3 cut(s) 67, 76, 228
TasI AATT 2 cut(s) 40, 210
TatI WGTACW 1 cut(s) 288
TfiI GAWTC 1 cut(s) 20
TspDTI ATGAA 2 cut(s) 25, 53
Tth111I GACNNNGTC 2 cut(s) 175, 224
VpaK11BI GGWCC 1 cut(s) 220
ZraI GACGTC 1 cut(s) 90
ZrmI AGTACT 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.