FvH4_5g04420

Peptidase inhibitor I9

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
2592404 .. 2593525
1122 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04420.t2

Sequence Viewer

Length: 291 bp
ATGGAAAATACAAAAAGCGAATCATACTTTGTTTTCATGAACTTTGATCCTCAATACGCTAGCCTTCGATCTAATCAAAGAAAGAAAGGGACGTCAGATGAGCTGGATCTGTATCTGAGCCGGAAGCATGACGAGCTTTTGGAAAGCACCCTCGAACCAGGAACTTATAGGAAGACGTTTTCTCTTGTTATTGCTGATGGCTTTGCTGTGGAAATTACTGAGGACCAGGCGAGTAAGCTTAGATCTGCAAAGGGAGTGAGATTGGTGGAGAAAAACCAAGAGATTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.01

Weight (kDa)

5.41

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016279)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 95
AclWI GGATC 2 cut(s) 41, 114
AcyI GRCGYC 1 cut(s) 92
AjnI CCWGG 2 cut(s) 157, 225
AluBI AGCT 3 cut(s) 103, 136, 238
AluI AGCT 3 cut(s) 103, 136, 238
AlwI GGATC 2 cut(s) 41, 114
AspS9I GGNCC 1 cut(s) 223
AsuNHI GCTAGC 1 cut(s) 59
AvaII GGWCC 1 cut(s) 223
BbsI GAAGAC 1 cut(s) 179
BccI CCATC 1 cut(s) 191
BciT130I CCWGG 2 cut(s) 159, 227
BfaI CTAG 1 cut(s) 60
BglII AGATCT 1 cut(s) 242
Bme1390I CCNGG 2 cut(s) 159, 227
Bme18I GGWCC 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 223
BmrFI CCNGG 2 cut(s) 159, 227
BmtI GCTAGC 1 cut(s) 63
BpiI GAAGAC 1 cut(s) 179
BsaBI GATNNNNATC 1 cut(s) 111
BsaHI GRCGYC 1 cut(s) 92
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 2 cut(s) 159, 227
BseJI GATNNNNATC 1 cut(s) 111
BseMII CTCAG 2 cut(s) 107, 210
BsiSI CCGG 1 cut(s) 121
BslFI GGGAC 1 cut(s) 103
BsmFI GGGAC 1 cut(s) 103
Bsp143I GATC 4 cut(s) 46, 68, 106, 242
BspCNI CTCAG 2 cut(s) 108, 211
BspHI TCATGA 1 cut(s) 36
BspOI GCTAGC 1 cut(s) 63
BspPI GGATC 2 cut(s) 41, 114
BssMI GATC 4 cut(s) 46, 68, 106, 242
BssNI GRCGYC 1 cut(s) 92
Bst2UI CCWGG 2 cut(s) 159, 227
BstACI GRCGYC 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 61
BstDEI CTNAG 3 cut(s) 116, 219, 239
BstKTI GATC 4 cut(s) 49, 71, 109, 245
BstMBI GATC 4 cut(s) 46, 68, 106, 242
BstMWI GCNNNNNNNGC 1 cut(s) 133
BstNI CCWGG 2 cut(s) 159, 227
BstSCI CCNGG 2 cut(s) 157, 225
BstV2I GAAGAC 1 cut(s) 179
BstX2I RGATCY 2 cut(s) 106, 242
BstYI RGATCY 2 cut(s) 106, 242
Cac8I GCNNGC 1 cut(s) 61
CciI TCATGA 1 cut(s) 36
Cfr13I GGNCC 1 cut(s) 223
CviAII CATG 2 cut(s) 37, 128
CviJI RGCY 6 cut(s) 63, 103, 120, 136, 201, 238
CviKI_1 RGCY 6 cut(s) 63, 103, 120, 136, 201, 238
DdeI CTNAG 3 cut(s) 116, 219, 239
DpnI GATC 4 cut(s) 48, 70, 108, 244
DpnII GATC 4 cut(s) 46, 68, 106, 242
Eco47I GGWCC 1 cut(s) 223
EcoRII CCWGG 2 cut(s) 157, 225
FaeI CATG 2 cut(s) 40, 131
FaiI YATR 4 cut(s) 25, 38, 129, 168
FaqI GGGAC 1 cut(s) 103
FatI CATG 2 cut(s) 36, 127
FspBI CTAG 1 cut(s) 60
HapII CCGG 1 cut(s) 121
Hin1I GRCGYC 1 cut(s) 92
Hin1II CATG 2 cut(s) 40, 131
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 1 cut(s) 20
HpaII CCGG 1 cut(s) 121
Hpy188I TCNGA 2 cut(s) 97, 117
Hpy188III TCNNGA 1 cut(s) 37
HpyAV CCTTC 1 cut(s) 74
HpyCH4IV ACGT 2 cut(s) 92, 176
HpyCH4V TGCA 1 cut(s) 248
HpyF10VI GCNNNNNNNGC 1 cut(s) 133
HpyF3I CTNAG 3 cut(s) 116, 219, 239
HpySE526I ACGT 2 cut(s) 92, 176
Hsp92I GRCGYC 1 cut(s) 92
Hsp92II CATG 2 cut(s) 40, 131
Kzo9I GATC 4 cut(s) 46, 68, 106, 242
LpnPI CCDG 6 cut(s) 89, 134, 144, 171, 212, 239
MaeI CTAG 1 cut(s) 60
MaeII ACGT 2 cut(s) 92, 176
MalI GATC 4 cut(s) 48, 70, 108, 244
MboI GATC 4 cut(s) 46, 68, 106, 242
MboII GAAGA 1 cut(s) 184
MflI RGATCY 2 cut(s) 106, 242
MluCI AATT 1 cut(s) 213
MnlI CCTC 3 cut(s) 60, 161, 214
MseI TTAA 1 cut(s) 289
MspI CCGG 1 cut(s) 121
MspR9I CCNGG 2 cut(s) 159, 227
MvaI CCWGG 2 cut(s) 159, 227
MwoI GCNNNNNNNGC 1 cut(s) 133
NdeII GATC 4 cut(s) 46, 68, 106, 242
NheI GCTAGC 1 cut(s) 59
NlaIII CATG 2 cut(s) 40, 131
PagI TCATGA 1 cut(s) 36
PfeI GAWTC 1 cut(s) 20
Psp6I CCWGG 2 cut(s) 157, 225
PspGI CCWGG 2 cut(s) 157, 225
PspPI GGNCC 1 cut(s) 223
PsuI RGATCY 2 cut(s) 106, 242
SaqAI TTAA 1 cut(s) 289
Sau3AI GATC 4 cut(s) 46, 68, 106, 242
Sau96I GGNCC 1 cut(s) 223
ScrFI CCNGG 2 cut(s) 159, 227
SetI ASST 5 cut(s) 95, 105, 138, 179, 240
SinI GGWCC 1 cut(s) 223
Sse9I AATT 1 cut(s) 213
SspMI CTAG 1 cut(s) 60
StyD4I CCNGG 2 cut(s) 157, 225
TaiI ACGT 2 cut(s) 95, 179
TaqI TCGA 2 cut(s) 67, 153
TasI AATT 1 cut(s) 213
TfiI GAWTC 1 cut(s) 20
Tru1I TTAA 1 cut(s) 289
Tru9I TTAA 1 cut(s) 289
TspDTI ATGAA 2 cut(s) 25, 53
VpaK11BI GGWCC 1 cut(s) 223
XspI CTAG 1 cut(s) 60
ZraI GACGTC 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.