FvH4_3g05282

LSM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0017944
Physical Location & Seq
Forward (+)
3079895 .. 3085680
5786 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g05282.t1

Sequence Viewer

Length: 1587 bp
ATGGACTGCTGCACCCCACGTGTTCCACTCTGCACTGGTTGGTCTTCGTGTCCCACTCTGCAGTCTGCACTAGCTGGTCCCACTCTGCACTGGCTGGTCTTCGTGTCCCACTCTGCAGTTTCGAACCTTGTTTGGCCTGATACAAGGTTAATGCCACAACCAACCTTGCTAAGCATCCAAGTTGTTCATGCGGCCCAAAGCAGGTCAAGGCGGGTCAAGGCAGCCCTATATGTGTCAAGGCGGTGCAAGGGGAGCCAAGGCGGGTCAAGACAGCCCAAAGTGGGTCAAGGCAGTCCTTTAGCGGGTCAAGACAGCCCAAAGTGGGTCAAAGCAGAAGGTCTGGGAGAGTCAAGGCAGCCTAAGGCGGGTCACAGCGGCCCTAGACGGGACAAGGCGGCCCATGAGGACCTAGGAGGGTTATGGCGGCCTAAGACGGGTCAAGGCGACTTGAAGGGTGAAGTGTCTTATACGTGGAGGAGTATCTTGGCAGGAAGAGAGGTGTTGAAATTGGGGCTAAGGTACCAGGTTGGGGATGGAATGAATATTTTAATTTGGAACGATCCATGGGTGCCTCAACCTCATTCTTTTAAACCTTATTCCCCTATGATGGAGGGCACTGAAGACTACAAAGTTGGAGATTTAATTGATCAGGAAACTAAAAAATGGGAGGACCAAGCTTCATCTTCTTCCAACGTAGTGGGAAAGGTGAGCAACAAGTATTGGTCAATGGTGTGGCAGGCCAGGGTTCCCCCAAAAATCAAATCTTTGGTGTGGCGTCTTTTGCACGATTATCTTCCAACAAGGGCTGAGCTCTTACGTCGCAAAGCCAACATTGAAGACTCGGCTTGTCTTTTCTGCATGAGTCAAGATTATCAGAAATACTATCCCAAGGCAGTGAGGAAAAAGGCTAGGCCTCGTGTGAGGTGGGAATGCCCACCTAGTGGAAGGCTGAAAATAAATGTCGACGGAGCATTTTGCTCGGACAATGGATATGGGGGAATTGGAGTAGTAGTGAGGGATGATTTTGGCATGGGTATTGCTGCAGTAGTAAGGCCTTTTCTACATGCACACTCGGTTCTTAATATGGAAGCGGAGGCGTGTAGGGTTGGTCTTCTTCTTGGTATTCACCAAGGTTGGACGAACATTGACATTGAAAGCAACTTTACCATCCTTGTGGTTGCTCTTAAAAGTGAGGAGGAAGATCTCTCGGAGGTCACCATGAACATGGAACGAGAAGCAGCGGAATCACTAATTCAGGTGGCGGGCTCAGAAGGGTCGAACCCGAATAGCCCAGACGGGTCGGACCTAGCTTTCTCGGAGGCCGTGACCCGCGTCAAGAAGCTTATTTTCCGGCGAATGCTGGTTGGGATCAAAGACGGCCGCTTTTTCCTGGGGACCTTTCACTGCATCGACAAACAGGGTAACATCATTCTTCAGGACTCGGTGGAGTATCGGAGCACTCGCCGGAGCTCGACTTCTCCGACGGAGCAGCGCTGCCTCGGTCTCATTCTCATCCCTAGCTCTTGTCGTATCTCTTGCCATGTTGGGTGTTCCGTTGAAGAACAACTAAGTCTACTTTCAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LSM

Protein Analysis

529

Amino Acids

58.59

Weight (kDa)

9.04

Isoelectric Point (pI)

59.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 236 - 289 4.3e-10 zinc-binding in reverse transcriptase
RVT_3 PF13456 320 - 405 1.2e-09 Reverse transcriptase-like
LSM PF01423 446 - 506 8.7e-07 LSM domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017944)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18372 AT4G18372
fragaria_vesca FvH4_3g05282
malus_domestica MD05G1281500.v1.1
prunus_persica Prupe.4G083100_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0014441
rosa_laevigata RLG00000032110
rosa_multiflora Rmu_sc0031709.1_g000002 Rmu_ssc0000422.1_g000033
rosa_roxburghii Rroxscaffold_1G00062140
rosa_wichuraiana Rw5G009820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 192
Acc65I GGTACC 1 cut(s) 519
AccB1I GGYRCC 2 cut(s) 519, 568
AccB7I CCANNNNNTGG 1 cut(s) 941
AccI GTMKAC 2 cut(s) 963, 1573
AccII CGCG 1 cut(s) 1332
AclWI GGATC 2 cut(s) 554, 1376
AcoI YGGCCR 1 cut(s) 1378
AcuI CTGAAG 2 cut(s) 639, 1418
AcvI CACGTG 1 cut(s) 20
AcyI GRCGYC 1 cut(s) 775
AdeI CACNNNGTG 1 cut(s) 941
AfaI GTAC 1 cut(s) 521
AfeI AGCGCT 1 cut(s) 1493
AflIII ACRYGT 1 cut(s) 19
AgsI TTSAA 5 cut(s) 451, 505, 836, 1154, 1559
AjnI CCWGG 3 cut(s) 522, 740, 1389
AluBI AGCT 7 cut(s) 74, 677, 811, 1310, 1342, 1470, 1521
AluI AGCT 7 cut(s) 74, 677, 811, 1310, 1342, 1470, 1521
Alw21I GWGCWC 3 cut(s) 813, 1460, 1472
Alw26I GTCTC 1 cut(s) 1508
AlwI GGATC 2 cut(s) 554, 1376
Aor51HI AGCGCT 1 cut(s) 1493
ApeKI GCWGC 7 cut(s) 9, 221, 355, 1040, 1238, 1489, 1494
Asp718I GGTACC 1 cut(s) 519
AspA2I CCTAGG 1 cut(s) 409
AspLEI GCGC 1 cut(s) 1494
AspS9I GGNCC 8 cut(s) 77, 193, 377, 397, 406, 670, 1303, 1395
AsuHPI GGTGA 4 cut(s) 467, 718, 1118, 1207
AsuII TTCGAA 1 cut(s) 122
AvaII GGWCC 5 cut(s) 77, 406, 670, 1303, 1395
AvrII CCTAGG 1 cut(s) 409
AxyI CCTNAGG 1 cut(s) 360
BaeGI GKGCMC 1 cut(s) 617
BanI GGYRCC 2 cut(s) 519, 568
BanII GRGCYC 3 cut(s) 813, 1268, 1472
BauI CACGAG 1 cut(s) 915
BbrPI CACGTG 1 cut(s) 20
BbsI GAAGAC 5 cut(s) 36, 91, 627, 843, 1103
Bbv12I GWGCWC 3 cut(s) 813, 1460, 1472
BbvI GCAGC 6 cut(s) 233, 367, 1027, 1250, 1481, 1501
BccI CCATC 3 cut(s) 527, 601, 1175
BceAI ACGGC 2 cut(s) 1307, 1393
BcgI CGANNNNNNTGC 2 cut(s) 960, 994
BciT130I CCWGG 3 cut(s) 524, 742, 1391
BclI TGATCA 1 cut(s) 646
BcoDI GTCTC 1 cut(s) 1508
BfaI CTAG 8 cut(s) 71, 381, 410, 909, 939, 1307, 1518, 1585
BfmI CTRYAG 3 cut(s) 59, 114, 1041
BfoI RGCGCY 1 cut(s) 1495
BfuAI ACCTGC 1 cut(s) 192
BglII AGATCT 1 cut(s) 1201
BlnI CCTAGG 1 cut(s) 409
BlpI GCTNAGC 2 cut(s) 170, 807
Bme1390I CCNGG 3 cut(s) 524, 742, 1391
Bme18I GGWCC 5 cut(s) 77, 406, 670, 1303, 1395
BmgT120I GGNCC 8 cut(s) 77, 193, 377, 397, 406, 670, 1303, 1395
BmiI GGNNCC 6 cut(s) 79, 254, 521, 570, 747, 1396
BmrFI CCNGG 3 cut(s) 524, 742, 1391
BmsI GCATC 2 cut(s) 183, 1416
BoxI GACNNNNGTC 1 cut(s) 1331
BpiI GAAGAC 5 cut(s) 36, 91, 627, 843, 1103
Bpu10I CCTNAGC 1 cut(s) 515
Bpu1102I GCTNAGC 2 cut(s) 170, 807
Bpu14I TTCGAA 1 cut(s) 122
BsaAI YACGTR 2 cut(s) 20, 471
BsaHI GRCGYC 1 cut(s) 775
BsaI GGTCTC 1 cut(s) 1508
BsaJI CCNNGG 8 cut(s) 256, 409, 563, 741, 888, 1129, 1390, 1498
BsaXI ACNNNNNCTCC 2 cut(s) 996, 1026
Bse1I ACTGG 2 cut(s) 40, 95
Bse21I CCTNAGG 1 cut(s) 360
BseBI CCWGG 3 cut(s) 524, 742, 1391
BseDI CCNNGG 8 cut(s) 256, 409, 563, 741, 888, 1129, 1390, 1498
BseGI GGATG 5 cut(s) 174, 538, 1024, 1167, 1512
BseMII CTCAG 2 cut(s) 798, 1281
BseNI ACTGG 2 cut(s) 40, 95
BseRI GAGGAG 2 cut(s) 490, 1208
BseSI GKGCMC 1 cut(s) 617
BseX3I CGGCCG 1 cut(s) 1378
BseXI GCAGC 6 cut(s) 233, 367, 1027, 1250, 1481, 1501
BsgI GTGCAG 3 cut(s) 16, 51, 71
Bsh1236I CGCG 1 cut(s) 1332
Bsh1285I CGRYCG 1 cut(s) 1381
BshNI GGYRCC 2 cut(s) 519, 568
BsiEI CGRYCG 1 cut(s) 1381
BsiHKAI GWGCWC 3 cut(s) 813, 1460, 1472
BsiSI CCGG 2 cut(s) 1351, 1465
BslFI GGGAC 5 cut(s) 36, 63, 91, 401, 1408
BsmAI GTCTC 1 cut(s) 1508
BsmFI GGGAC 5 cut(s) 36, 63, 91, 401, 1408
BsmI GAATGC 2 cut(s) 935, 1362
Bso31I GGTCTC 1 cut(s) 1508
Bsp119I TTCGAA 1 cut(s) 122
Bsp1286I GDGCHC 5 cut(s) 617, 813, 1268, 1460, 1472
Bsp143I GATC 4 cut(s) 559, 646, 1201, 1368
Bsp1720I GCTNAGC 2 cut(s) 170, 807
Bsp19I CCATGG 1 cut(s) 563
BspCNI CTCAG 2 cut(s) 799, 1280
BspFNI CGCG 1 cut(s) 1332
BspLI GGNNCC 6 cut(s) 79, 254, 521, 570, 747, 1396
BspMAI CTGCAG 3 cut(s) 63, 118, 1045
BspMI ACCTGC 1 cut(s) 192
BspPI GGATC 2 cut(s) 554, 1376
BspT104I TTCGAA 1 cut(s) 122
BspT107I GGYRCC 2 cut(s) 519, 568
BspTNI GGTCTC 1 cut(s) 1508
BsrI ACTGG 2 cut(s) 40, 95
BssECI CCNNGG 8 cut(s) 256, 409, 563, 741, 888, 1129, 1390, 1498
BssMI GATC 4 cut(s) 559, 646, 1201, 1368
BssNI GRCGYC 1 cut(s) 775
BssSI CACGAG 1 cut(s) 915
BssT1I CCWWGG 5 cut(s) 256, 409, 563, 888, 1129
Bst2BI CACGAG 1 cut(s) 915
Bst2UI CCWGG 3 cut(s) 524, 742, 1391
Bst6I CTCTTC 1 cut(s) 487
BstACI GRCGYC 1 cut(s) 775
BstBAI YACGTR 2 cut(s) 20, 471
BstBI TTCGAA 1 cut(s) 122
BstC8I GCNNGC 2 cut(s) 738, 1264
BstDEI CTNAG 7 cut(s) 170, 360, 429, 515, 807, 1267, 1568
BstDSI CCRYGG 1 cut(s) 563
BstEII GGTNACC 1 cut(s) 1213
BstF5I GGATG 5 cut(s) 174, 538, 1024, 1167, 1512
BstFNI CGCG 1 cut(s) 1332
BstH2I RGCGCY 1 cut(s) 1495
BstHHI GCGC 1 cut(s) 1494
BstKTI GATC 4 cut(s) 562, 649, 1204, 1371
BstMAI GTCTC 1 cut(s) 1508
BstMBI GATC 4 cut(s) 559, 646, 1201, 1368
BstMCI CGRYCG 1 cut(s) 1381
BstMWI GCNNNNNNNGC 2 cut(s) 252, 781
BstNI CCWGG 3 cut(s) 524, 742, 1391
BstNSI RCATGY 1 cut(s) 1067
BstPAI GACNNNNGTC 1 cut(s) 1331
BstPI GGTNACC 1 cut(s) 1213
BstSCI CCNGG 3 cut(s) 522, 740, 1389
BstSFI CTRYAG 3 cut(s) 59, 114, 1041
BstSLI GKGCMC 1 cut(s) 617
BstUI CGCG 1 cut(s) 1332
BstV1I GCAGC 6 cut(s) 233, 367, 1027, 1250, 1481, 1501
BstV2I GAAGAC 5 cut(s) 36, 91, 627, 843, 1103
BstX2I RGATCY 1 cut(s) 1201
BstXI CCANNNNNNTGG 3 cut(s) 697, 1174, 1225
BstYI RGATCY 1 cut(s) 1201
BstZI CGGCCG 1 cut(s) 1378
Bsu36I CCTNAGG 1 cut(s) 360
BtgI CCRYGG 1 cut(s) 563
BtsCI GGATG 5 cut(s) 174, 538, 1024, 1167, 1512
BtsI GCAGTG 2 cut(s) 900, 1402
BtsIMutI CAGTG 5 cut(s) 33, 88, 615, 900, 1402
BveI ACCTGC 1 cut(s) 192
Cac8I GCNNGC 2 cut(s) 738, 1264
CfoI GCGC 1 cut(s) 1494
Cfr13I GGNCC 8 cut(s) 77, 193, 377, 397, 406, 670, 1303, 1395
CseI GACGC 2 cut(s) 764, 1321
CsiI ACCWGGT 1 cut(s) 522
Csp6I GTAC 1 cut(s) 520
CviAII CATG 9 cut(s) 188, 401, 564, 859, 1030, 1064, 1219, 1225, 1541
CviQI GTAC 1 cut(s) 520
DdeI CTNAG 7 cut(s) 170, 360, 429, 515, 807, 1267, 1568
DpnI GATC 4 cut(s) 561, 648, 1203, 1370
DpnII GATC 4 cut(s) 559, 646, 1201, 1368
DraI TTTAAA 1 cut(s) 589
DraIII CACNNNGTG 1 cut(s) 941
EaeI YGGCCR 1 cut(s) 1378
EagI CGGCCG 1 cut(s) 1378
Eam1104I CTCTTC 1 cut(s) 487
EarI CTCTTC 1 cut(s) 487
Ecl136II GAGCTC 2 cut(s) 811, 1470
EclXI CGGCCG 1 cut(s) 1378
Eco130I CCWWGG 5 cut(s) 256, 409, 563, 888, 1129
Eco147I AGGCCT 2 cut(s) 913, 1054
Eco24I GRGCYC 3 cut(s) 813, 1268, 1472
Eco31I GGTCTC 1 cut(s) 1508
Eco47I GGWCC 5 cut(s) 77, 406, 670, 1303, 1395
Eco47III AGCGCT 1 cut(s) 1493
Eco52I CGGCCG 1 cut(s) 1378
Eco53kI GAGCTC 2 cut(s) 811, 1470
Eco57I CTGAAG 2 cut(s) 639, 1418
Eco72I CACGTG 1 cut(s) 20
Eco81I CCTNAGG 1 cut(s) 360
Eco91I GGTNACC 1 cut(s) 1213
EcoICRI GAGCTC 2 cut(s) 811, 1470
EcoO109I RGGNCCY 2 cut(s) 406, 1395
EcoO65I GGTNACC 1 cut(s) 1213
EcoRII CCWGG 3 cut(s) 522, 740, 1389
EcoT14I CCWWGG 5 cut(s) 256, 409, 563, 888, 1129
EcoT38I GRGCYC 3 cut(s) 813, 1268, 1472
ErhI CCWWGG 5 cut(s) 256, 409, 563, 888, 1129
FaeI CATG 9 cut(s) 191, 404, 567, 862, 1033, 1067, 1222, 1228, 1544
FaqI GGGAC 5 cut(s) 36, 63, 91, 401, 1408
FatI CATG 9 cut(s) 187, 400, 563, 858, 1029, 1063, 1218, 1224, 1540
FauI CCCGC 6 cut(s) 204, 254, 295, 358, 1255, 1337
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 2 cut(s) 963, 1573
FokI GGATG 5 cut(s) 161, 545, 1031, 1154, 1499
FriOI GRGCYC 3 cut(s) 813, 1268, 1472
FspBI CTAG 8 cut(s) 71, 381, 410, 909, 939, 1307, 1518, 1585
GlaI GCGC 1 cut(s) 1493
HaeII RGCGCY 1 cut(s) 1495
HapII CCGG 2 cut(s) 1351, 1465
HgaI GACGC 2 cut(s) 764, 1321
HhaI GCGC 1 cut(s) 1494
Hin1I GRCGYC 1 cut(s) 775
Hin1II CATG 9 cut(s) 191, 404, 567, 862, 1033, 1067, 1222, 1228, 1544
Hin6I GCGC 1 cut(s) 1492
HinP1I GCGC 1 cut(s) 1492
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HindIII AAGCTT 2 cut(s) 675, 1340
HinfI GANTC 5 cut(s) 347, 839, 862, 1244, 1439
HpaII CCGG 2 cut(s) 1351, 1465
HphI GGTGA 4 cut(s) 467, 718, 1118, 1207
Hpy166II GTNNAC 2 cut(s) 964, 1574
Hpy188I TCNGA 8 cut(s) 876, 982, 1210, 1270, 1303, 1318, 1455, 1482
Hpy188III TCNNGA 6 cut(s) 267, 308, 650, 866, 1336, 1436
Hpy8I GTNNAC 2 cut(s) 964, 1574
Hpy99I CGWCG 3 cut(s) 822, 968, 1486
HpyAV CCTTC 4 cut(s) 329, 445, 939, 1265
HpyCH4IV ACGT 4 cut(s) 19, 470, 693, 817
HpyF10VI GCNNNNNNNGC 2 cut(s) 252, 781
HpyF3I CTNAG 7 cut(s) 170, 360, 429, 515, 807, 1267, 1568
HpySE526I ACGT 4 cut(s) 19, 470, 693, 817
Hsp92I GRCGYC 1 cut(s) 775
Hsp92II CATG 9 cut(s) 191, 404, 567, 862, 1033, 1067, 1222, 1228, 1544
HspAI GCGC 1 cut(s) 1492
KpnI GGTACC 1 cut(s) 523
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 4 cut(s) 559, 646, 1201, 1368
LmnI GCTCC 5 cut(s) 252, 968, 1455, 1467, 1486
Lsp1109I GCAGC 6 cut(s) 233, 367, 1027, 1250, 1481, 1501
LweI GCATC 2 cut(s) 183, 1416
MabI ACCWGGT 1 cut(s) 522
MaeI CTAG 8 cut(s) 71, 381, 410, 909, 939, 1307, 1518, 1585
MaeII ACGT 4 cut(s) 19, 470, 693, 817
MaeIII GTNAC 4 cut(s) 368, 1213, 1324, 1421
MalI GATC 4 cut(s) 561, 648, 1203, 1370
MboI GATC 4 cut(s) 559, 646, 1201, 1368
MflI RGATCY 1 cut(s) 1201
MhlI GDGCHC 5 cut(s) 617, 813, 1268, 1460, 1472
MluCI AATT 5 cut(s) 506, 549, 642, 999, 1251
MlyI GAGTC 4 cut(s) 356, 833, 871, 1433
MmeI TCCRAC 6 cut(s) 613, 714, 821, 1115, 1281, 1505
MseI TTAA 6 cut(s) 149, 548, 588, 641, 1080, 1185
MslI CAYNNNNRTG 2 cut(s) 1172, 1223
MspA1I CMGCKG 2 cut(s) 375, 1241
MspI CCGG 2 cut(s) 1351, 1465
MspR9I CCNGG 3 cut(s) 524, 742, 1391
Mva1269I GAATGC 2 cut(s) 935, 1362
MvaI CCWGG 3 cut(s) 524, 742, 1391
MvnI CGCG 1 cut(s) 1332
MwoI GCNNNNNNNGC 2 cut(s) 252, 781
NcoI CCATGG 1 cut(s) 563
NdeII GATC 4 cut(s) 559, 646, 1201, 1368
NlaIII CATG 9 cut(s) 191, 404, 567, 862, 1033, 1067, 1222, 1228, 1544
NlaIV GGNNCC 6 cut(s) 79, 254, 521, 570, 747, 1396
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 3 cut(s) 368, 1213, 1324
NspI RCATGY 1 cut(s) 1067
NspV TTCGAA 1 cut(s) 122
PceI AGGCCT 2 cut(s) 913, 1054
PcsI WCGNNNNNNNCGW 1 cut(s) 1478
PctI GAATGC 2 cut(s) 935, 1362
PfeI GAWTC 1 cut(s) 1244
PflMI CCANNNNNTGG 1 cut(s) 941
PleI GAGTC 4 cut(s) 355, 833, 870, 1433
PmaCI CACGTG 1 cut(s) 20
PmlI CACGTG 1 cut(s) 20
PpsI GAGTC 4 cut(s) 355, 833, 870, 1433
Ppu21I YACGTR 2 cut(s) 20, 471
PpuMI RGGWCCY 2 cut(s) 406, 1395
PshAI GACNNNNGTC 1 cut(s) 1331
Psp124BI GAGCTC 2 cut(s) 813, 1472
Psp5II RGGWCCY 2 cut(s) 406, 1395
Psp6I CCWGG 3 cut(s) 522, 740, 1389
PspCI CACGTG 1 cut(s) 20
PspEI GGTNACC 1 cut(s) 1213
PspGI CCWGG 3 cut(s) 522, 740, 1389
PspN4I GGNNCC 6 cut(s) 79, 254, 521, 570, 747, 1396
PspPI GGNCC 8 cut(s) 77, 193, 377, 397, 406, 670, 1303, 1395
PspPPI RGGWCCY 2 cut(s) 406, 1395
PstI CTGCAG 3 cut(s) 63, 118, 1045
PsuI RGATCY 1 cut(s) 1201
RsaI GTAC 1 cut(s) 521
RsaNI GTAC 1 cut(s) 520
RseI CAYNNNNRTG 2 cut(s) 1172, 1223
SacI GAGCTC 2 cut(s) 813, 1472
SalI GTCGAC 1 cut(s) 962
SaqAI TTAA 6 cut(s) 149, 548, 588, 641, 1080, 1185
Sau3AI GATC 4 cut(s) 559, 646, 1201, 1368
Sau96I GGNCC 8 cut(s) 77, 193, 377, 397, 406, 670, 1303, 1395
SchI GAGTC 4 cut(s) 356, 833, 871, 1433
ScrFI CCNGG 3 cut(s) 524, 742, 1391
SduI GDGCHC 5 cut(s) 617, 813, 1268, 1460, 1472
SexAI ACCWGGT 1 cut(s) 522
SfaNI GCATC 2 cut(s) 183, 1416
SfcI CTRYAG 3 cut(s) 59, 114, 1041
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 5 cut(s) 77, 406, 670, 1303, 1395
SmiMI CAYNNNNRTG 2 cut(s) 1172, 1223
Sse9I AATT 5 cut(s) 506, 549, 642, 999, 1251
SseBI AGGCCT 2 cut(s) 913, 1054
SspI AATATT 1 cut(s) 544
SspMI CTAG 8 cut(s) 71, 381, 410, 909, 939, 1307, 1518, 1585
SstI GAGCTC 2 cut(s) 813, 1472
StuI AGGCCT 2 cut(s) 913, 1054
StyD4I CCNGG 3 cut(s) 522, 740, 1389
StyI CCWWGG 5 cut(s) 256, 409, 563, 888, 1129
TaiI ACGT 4 cut(s) 22, 473, 696, 820
TaqI TCGA 5 cut(s) 122, 963, 1277, 1410, 1472
TaqII GACCGA 1 cut(s) 1490
TasI AATT 5 cut(s) 506, 549, 642, 999, 1251
TauI GCSGC 5 cut(s) 194, 378, 398, 427, 1383
TfiI GAWTC 1 cut(s) 1244
Tru1I TTAA 6 cut(s) 149, 548, 588, 641, 1080, 1185
Tru9I TTAA 6 cut(s) 149, 548, 588, 641, 1080, 1185
TscAI CASTG 5 cut(s) 40, 95, 622, 900, 1409
TseFI GTSAC 3 cut(s) 368, 1213, 1324
TseI GCWGC 7 cut(s) 9, 221, 355, 1040, 1238, 1489, 1494
Tsp45I GTSAC 3 cut(s) 368, 1213, 1324
TspDTI ATGAA 4 cut(s) 176, 554, 669, 1235
TspGWI ACGGA 3 cut(s) 981, 1499, 1543
TspRI CASTG 5 cut(s) 40, 95, 622, 900, 1409
Van91I CCANNNNNTGG 1 cut(s) 941
VpaK11BI GGWCC 5 cut(s) 77, 406, 670, 1303, 1395
XceI RCATGY 1 cut(s) 1067
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
XmaJI CCTAGG 1 cut(s) 409
XmiI GTMKAC 2 cut(s) 963, 1573
XspI CTAG 8 cut(s) 71, 381, 410, 909, 939, 1307, 1518, 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.