FvH4_3g15310
ERF Family

ARM repeat superfamily protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
9506515 .. 9515676
9162 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15310.t2

Sequence Viewer

Length: 4083 bp
ATGGACGAAAACGACGGCTTCGCGGTCTCGGCCGAACAAGGAAGAAGCCGAGTGTTTACGCAGCTGAAGTCGTACTGCTTCGAGCTTCTGGAGCTTTTCCAAAACCCTAAGAAGAGCTCCTCGTCTATCTCTTCTCTGCTTCAGTTTCTTCGCCAGACTCCTTCTCATTCTCTCCAGCCTTTCTTCGACTATACTTTGTTTCCGTTGCTACTTCTATTCGATGCATCTGTGGAGTGTAGATCCCCAAAGAAGCTTGGTTCTGAAGAAAAAGTTGCGACTGCTAATATCACAAAAGTTCCCCAAAAAGTGAGTGACAGTGTGGCTGAAGGTGTGCTTCACTGTCTGGAGGAACTCCTTACGAAGTGTCTCTTAGGATCTGTAGACCAGATGGTTGTTGTGCTCAAGAAGTTGACTTATGGGGCTTTGCTTTCACCATCTGATGCATCAGAAGAGTTTCGTGAGGGAGTTATCAAGTGTTTCAGGGCACTGCTTCTGAATTTACTTCCATGCTCTGATAAGTCCTGCACATGTCATCAAATCTTTGGTCTGCCTATGCTATTAGAAAAGAGAGATTTTAAATCTCCAGCCATTAGCTCTCCAAACTACGTTTCAGCATCAAATGAATGTTTACTTTCATTTCTACAGTCACAAGCTGCTTCTGCAGCTGTTGGACATTGGCTATCTCTTCTTCTCAAAGCTGCAGACAATGAGGCTATGCGAGGACATCTAGGGAGTGCAAAGCTTCGTGTTGAAGTATTTTTGACTCTTCGTGTGCTTGTTGCTAAGGTTGGTACTGCTGATGCATTGGCCTTCTTTTTACCTGGTGTCGTTAGTCAGTTTGCTAAAGTTTTGCATGCCTCCAAAATGATGACCAGTGGAGCTGCTGGAAGTGGGGATGCAATTGATCAAGCAGTTAGAGGTTTGGCTGAGTATCTGATGATAGTTCTCCAGGATGATGCTAATTTATCTGGACGTGATATGTCAATAATTGTTACTTCTGACAAAAAGTACGAGTCTACACAATCTTTTATGGACGAGCTTCGTCAATTGCCAATTAAGTCCCATTCTCAAAGCAAAATTTTACTGGATGATTCAAGTGGTCAAATGATTACAAGTATTTCCAAATCTGAGAGGAAAATTGATTCTGGCAAGGGCGATGCATCTTTTCATGTGAATCGTACGAATGACTGGATTGAAAAAACTTCAGTTCATGTGGATAAACTTTTGGGCACAACTTTTCGACATATCTGCATTCATCCAGCAAAGAAAGTGAGACAAGGGCTCCTGGCTTCCATACGAGGACTGTTGTCAAAGTGCACTTATACACTGAGGCAGAGTAGACAAATGTTTCTGGAGGGCTTATGTGTTTTGGTTATAGATGAAGCTGAAGAGGTGTCTTCAGGTGCACAGGAATTTCTTGAAAATTTATTCACGTTGATTGGAAAATATCAATTGGAACAAGATGTTGCTCAGATATTTAGCAGGCTCATTGATAAGCTTCCAAAAGTGGTGCTTGGGAGTGAGGAATCAGTTGCACTGTCACATGCTCAGCAGTTACTTGTAATCATGTACTATTCTGGTCCTCAGTTTGTGGTGGATCACATCCTTCAGTCTCCTGTAACAACTACTCTTTTCTTGGACATTTTCGCTATATGTATGAGTCAAAATTCGGTATATGCTGGATCTCTTGATAAGCTTATTACATCGAGGCCATCCTCAGTAAGATACCTAGACTCTATTACTGAGTTGAAAGCTGGAATCCACCTTACCAGTGATTGCCTAATAAACATGGCTGCTACCCCTCAAAATTCAAAGATTACAGCCATCCAGGAGAAAGACCCACCCTATACATCAGATAATGCCCAGAAGAATTATGAGCTTCCGCACATGCCTCCTTGGTTTGTTTACATCGGGGGTCGAAAGCTATACCAATCTCTTTCAGGGATTCTCAGACTTGTGGGTCTGTCCTTGATGGCAGATAAAAAGAATGGGCAGCATTTAGCACTTATCACTGACATTCCACTGGGTTACTTGCGAAATTTAGTTTCTGAGGTCCGCATGAAGGATTATAATGAAACAAGTTGGCACTCTTGGTATAAAAGAACTGGTTCGGGACAGTTGCTACGCCAAGCAAGCACTGCTGTATGTATTCTGAACGAGATGATATTTGGTATATCAGATCAAGCCACTGAATATTTCAGAAGGAGGTTTCAAAAGTCAAGCAAAAGAAGGCAAGAAGTTCAGGAATCTGATGCCAAATTTGTTGGTGCCCAACATTTCAATACTGAATTATCCATGTTCGGTGAATCTAGGTGGAAAGTTTTACAGGATGAGGGTTTAAGGAGTCACTTGATTGATTGTATTGGTAGAATTTTACATGAATATCTATCTCATGAAGTATGGGATCTTCCAACAGAAAATAGATCTCCGGTTATACTTCATGATTATGAAGCTGAGGATATTAGCGTAAACTTGTTTCATGACACGGCTATGTTACACCAGGTTATTATTGAAGGAATAGGCATCATCAGTATCTGCCTTGGAGGGGATTTTGCCTCTAGTGGATTTCTTCATCAGTCACTTTATATGTTGCTCGAGAACCTCATTTCTTCAAACTATCATGTTAGAAGTGCTTCTGATGCTGTATTGCACATTCTGGCAGCTACATCTGGTTATCCGACAGTTGGGCATCTGGTATTAGGGAATGCAGATTATGTGATAGATTCAATATGCAGACAATTACGCCATTTGGAGATTAATCCTCATGTGCCAAGTGTGCTTGCAGCAATGCTATCTTATGTTGGAGTAGCTTATAAGATATTGCCTTTATTCGAGGAGCCGATGCGCTCAGTTTCTCTGGAGCTTGAGATTCTTGGCAGGCATCAGCACCCTGAATTAACGATCCCATTTTTAAAGGCCGTAGCAGAAATCGCCAAGGCATCAAAGCGTGAGGCTTGTTCCTTACCAACCCATGCAGAGTCTTACTTGTTGGATGTCAAGGCCAATATATCCGATACAAAAAAGAAAGATGAGGATGACATTAATATGTCTCATGAGGAATCAGAGAAATGGGAGAGCATTTTGTTCAAGCTGAATGATTCAAAGAGATATAGACGAACAGTTGGAGCTATTGCCAGTTCATGTATTATGGCTGCAACCTCTCTACTGGCTTCAGAAAATCAAGCAGCTTGTTTGGTGGCCTTGGATATAGTTGAGGATGGTGTTACGTCATTGGCGAAAGTAGAAGAGGCCTATCGCCATGAGAGAGATACTAAGGAAGGAATTGAAGAAGTAATTCAGGAATATTCACTCTATCATCTTCAAGATAATTTAGATGCTGCTGATGAAGGGGCTGATGAGAACAGGTTGCTTCCAGCAATGAATAAAATATGGCCTTTCCTGGTTGTTTGTATCCGAAATAAAAACCCACTGGCTGTTCGAAGATGTTTATCTGTAGTAAGCAATGTAGTGCAAATTTCTGGGGGAGATTTCTTTTCACGACGTTTCCACACTGATGGCGCCCACTTCTGGAAACTTTTATCCACCTCCCCATTCCATAGAAAACCCAACCTTAAAGAAGAAAGAATCCCTCTGCAACTCCCTTACAGAAGCACATCCAGTTCTTCAGAAAGCTCCATGGCTGAAACTTCCAATCTGAAAGTCCAGGCTGCGGTGCTCAACATGATTGCTGAATTGTCCCGAAACAATAAGAGTGCTTCGGCATTGGACATTGTCCTCAAGAAGGTCAGTGGTCTTGTGGTTGGGATTGCTTGCAGTGGTGTCGTAGGTCTACGTGAAGCTGCTGTAAATGCCCTTCAGGGTCTTGCATCTGTTGACCCTGATCTTATATGGCTTCTTATGGCTGATGTTTACTATTCTATGAAGAAAAAAGATATGCCTCCACCCCCAACACCAGATATTCCAGCAATCTCCCAAATTCTTCCTCCACCCTCATGTCCAAAAGAGTACCTTTACGTTCAGTATGGAGGTCAGAGTTATGGTTTCGATGTAGACTTTGCTTCTGTTGAAACTGTTTTCAAGAAACTTCACTCTAGAGTTTTTGTTAACCAAATGTACAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1361

Amino Acids

151.16

Weight (kDa)

6.19

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_TTI1_N PF24173 77 - 332 1.6e-18 TTI1 N-terminal TPR domain
TTI1 PF21547 732 - 822 4.3e-26 TELO2-interacting protein 1
TPR_TTI1_C PF24181 872 - 1155 5.7e-13 TTI1 C-terminal TPR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2070, 2814
AasI GACNNNNNNGTC 1 cut(s) 1959
AccB1I GGYRCC 2 cut(s) 2267, 3518
AccI GTMKAC 5 cut(s) 381, 1016, 1339, 3790, 4011
AccII CGCG 1 cut(s) 23
AciI CCGC 4 cut(s) 23, 1883, 2056, 3671
AclWI GGATC 6 cut(s) 234, 382, 1605, 1690, 2412, 2896
AcoI YGGCCR 1 cut(s) 30
AcyI GRCGYC 1 cut(s) 3519
AfaI GTAC 7 cut(s) 74, 793, 1010, 1180, 1571, 3968, 4076
AfiI CCNNNNNNNGG 6 cut(s) 2062, 2545, 2684, 3528, 3670, 3742
AflIII ACRYGT 1 cut(s) 527
AjiI CACGTC 1 cut(s) 974
AjnI CCWGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
AjuI GAANNNNNNNTTGG 2 cut(s) 592, 624
Alw21I GWGCWC 5 cut(s) 119, 402, 1319, 1408, 3678
Alw26I GTCTC 5 cut(s) 31, 371, 1267, 1617, 3054
Alw44I GTGCAC 2 cut(s) 1315, 1404
AlwI GGATC 6 cut(s) 234, 382, 1605, 1690, 2412, 2896
AlwNI CAGNNNCTG 1 cut(s) 2535
Ama87I CYCGRG 1 cut(s) 2594
AoxI GGCC 8 cut(s) 30, 807, 1709, 2916, 3000, 3198, 3249, 3392
ApaLI GTGCAC 2 cut(s) 1315, 1404
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
AseI ATTAAT 2 cut(s) 2757, 3042
Asp700I GAANNNNTTC 4 cut(s) 453, 2107, 2632, 3294
AspLEI GCGC 2 cut(s) 2847, 3521
AspS9I GGNCC 2 cut(s) 1580, 2053
AsuHPI GGTGA 2 cut(s) 423, 2315
AsuII TTCGAA 1 cut(s) 3439
AvaI CYCGRG 1 cut(s) 2594
AvaII GGWCC 2 cut(s) 1580, 2053
BaeGI GKGCMC 5 cut(s) 487, 1232, 1319, 1408, 2272
BanI GGYRCC 2 cut(s) 2267, 3518
BanII GRGCYC 2 cut(s) 119, 1284
BarI GAAGNNNNNNTAC 4 cut(s) 2391, 2423, 3798, 3830
BbsI GAAGAC 1 cut(s) 1389
Bbv12I GWGCWC 5 cut(s) 119, 402, 1319, 1408, 3678
BbvCI CCTCAGC 1 cut(s) 2454
BccI CCATC 7 cut(s) 382, 442, 1720, 1832, 1966, 3212, 3509
BceAI ACGGC 3 cut(s) 31, 2502, 2903
BcgI CGANNNNNNTGC 4 cut(s) 1230, 1264, 3763, 3797
BciT130I CCWGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
BciVI GTATCC 1 cut(s) 3422
BclI TGATCA 1 cut(s) 904
BcoDI GTCTC 5 cut(s) 31, 371, 1267, 1617, 3054
BfaI CTAG 5 cut(s) 728, 1730, 2310, 2559, 4053
BfmI CTRYAG 5 cut(s) 378, 641, 660, 699, 3453
BfoI RGCGCY 1 cut(s) 3522
BfuI GTATCC 1 cut(s) 3422
BglII AGATCT 1 cut(s) 2423
BlpI GCTNAGC 1 cut(s) 1548
Bme1390I CCNGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
Bme18I GGWCC 2 cut(s) 1580, 2053
BmeT110I CYCGRG 1 cut(s) 2594
BmgBI CACGTC 1 cut(s) 974
BmgT120I GGNCC 2 cut(s) 1580, 2053
BmiI GGNNCC 4 cut(s) 1283, 2269, 2838, 3520
BmrFI CCNGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
BmrI ACTGGG 1 cut(s) 2033
BmuI ACTGGG 1 cut(s) 2033
BoxI GACNNNNGTC 1 cut(s) 1306
BpiI GAAGAC 1 cut(s) 1389
BpmI CTGGAG 7 cut(s) 110, 158, 365, 567, 932, 1373, 2879
Bpu10I CCTNAGC 2 cut(s) 783, 2454
Bpu1102I GCTNAGC 1 cut(s) 1548
Bpu14I TTCGAA 1 cut(s) 3439
BpuEI CTTGAG 3 cut(s) 386, 2885, 3722
BsaAI YACGTR 1 cut(s) 3794
BsaBI GATNNNNATC 1 cut(s) 3448
BsaHI GRCGYC 1 cut(s) 3519
BsaI GGTCTC 1 cut(s) 31
BsaJI CCNNGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
BsaWI WCCGGW 1 cut(s) 2428
BsaXI ACNNNNNCTCC 2 cut(s) 1266, 1296
Bsc4I CCNNNNNNNGG 6 cut(s) 2062, 2545, 2684, 3528, 3670, 3742
Bse3DI GCAATG 3 cut(s) 2793, 3384, 3469
Bse8I GATNNNNATC 1 cut(s) 3448
BseBI CCWGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
BseDI CCNNGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
BseJI GATNNNNATC 1 cut(s) 3448
BseLI CCNNNNNNNGG 6 cut(s) 2062, 2545, 2684, 3528, 3670, 3742
BseMI GCAATG 3 cut(s) 2793, 3384, 3469
BseRI GAGGAG 2 cut(s) 109, 2849
BseSI GKGCMC 5 cut(s) 487, 1232, 1319, 1408, 2272
BseX3I CGGCCG 1 cut(s) 30
BsgI GTGCAG 1 cut(s) 508
Bsh1236I CGCG 1 cut(s) 23
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 8 cut(s) 32, 809, 1711, 2918, 3002, 3200, 3251, 3394
BshNI GGYRCC 2 cut(s) 2267, 3518
BsiEI CGRYCG 1 cut(s) 33
BsiHKAI GWGCWC 5 cut(s) 119, 402, 1319, 1408, 3678
BsiHKCI CYCGRG 1 cut(s) 2594
BsiSI CCGG 1 cut(s) 2429
BsiWI CGTACG 1 cut(s) 1178
BslFI GGGAC 3 cut(s) 1045, 2127, 3682
BslI CCNNNNNNNGG 6 cut(s) 2062, 2545, 2684, 3528, 3670, 3742
BsmAI GTCTC 5 cut(s) 31, 371, 1267, 1617, 3054
BsmFI GGGAC 3 cut(s) 1045, 2127, 3682
BsmI GAATGC 2 cut(s) 1251, 2710
BsnI GGCC 8 cut(s) 32, 809, 1711, 2918, 3002, 3200, 3251, 3394
Bso31I GGTCTC 1 cut(s) 31
BsoBI CYCGRG 1 cut(s) 2594
Bsp119I TTCGAA 1 cut(s) 3439
Bsp1286I GDGCHC 9 cut(s) 119, 402, 487, 1232, 1284, 1319, 1408, 2272, 3678
Bsp1407I TGTACA 1 cut(s) 4074
Bsp1720I GCTNAGC 1 cut(s) 1548
Bsp19I CCATGG 1 cut(s) 3636
BspACI CCGC 4 cut(s) 23, 1883, 2056, 3671
BspANI GGCC 8 cut(s) 32, 809, 1711, 2918, 3002, 3200, 3251, 3394
BspFNI CGCG 1 cut(s) 23
BspHI TCATGA 4 cut(s) 2392, 2440, 2479, 3052
BspLI GGNNCC 4 cut(s) 1283, 2269, 2838, 3520
BspMAI CTGCAG 2 cut(s) 664, 703
BspPI GGATC 6 cut(s) 234, 382, 1605, 1690, 2412, 2896
BspQI GCTCTTC 1 cut(s) 107
BspT104I TTCGAA 1 cut(s) 3439
BspT107I GGYRCC 2 cut(s) 2267, 3518
BspTNI GGTCTC 1 cut(s) 31
BsrDI GCAATG 3 cut(s) 2793, 3384, 3469
BsrGI TGTACA 1 cut(s) 4074
BssECI CCNNGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
BssNI GRCGYC 1 cut(s) 3519
BssT1I CCWWGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
Bst2UI CCWGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
Bst6I CTCTTC 7 cut(s) 107, 136, 444, 690, 771, 1383, 3240
BstACI GRCGYC 1 cut(s) 3519
BstAPI GCANNNNNTGC 1 cut(s) 2138
BstAUI TGTACA 1 cut(s) 4074
BstBAI YACGTR 1 cut(s) 3794
BstBI TTCGAA 1 cut(s) 3439
BstC8I GCNNGC 6 cut(s) 855, 1484, 2134, 2781, 2879, 3772
BstDSI CCRYGG 1 cut(s) 3636
BstENI CCTNNNNNAGG 1 cut(s) 3740
BstFNI CGCG 1 cut(s) 23
BstH2I RGCGCY 1 cut(s) 3522
BstHHI GCGC 2 cut(s) 2847, 3521
BstMAI GTCTC 5 cut(s) 31, 371, 1267, 1617, 3054
BstMCI CGRYCG 1 cut(s) 33
BstNI CCWGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
BstNSI RCATGY 4 cut(s) 531, 857, 1547, 1891
BstPAI GACNNNNGTC 1 cut(s) 1306
BstSCI CCNGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
BstSFI CTRYAG 5 cut(s) 378, 641, 660, 699, 3453
BstSLI GKGCMC 5 cut(s) 487, 1232, 1319, 1408, 2272
BstUI CGCG 1 cut(s) 23
BstV2I GAAGAC 1 cut(s) 1389
BstX2I RGATCY 5 cut(s) 239, 374, 1682, 2404, 2423
BstXI CCANNNNNNTGG 1 cut(s) 3515
BstYI RGATCY 5 cut(s) 239, 374, 1682, 2404, 2423
BstZI CGGCCG 1 cut(s) 30
BsuI GTATCC 1 cut(s) 3422
BsuRI GGCC 8 cut(s) 32, 809, 1711, 2918, 3002, 3200, 3251, 3394
BtgI CCRYGG 1 cut(s) 3636
BtgZI GCGATG 1 cut(s) 1170
BtrI CACGTC 1 cut(s) 974
BtsI GCAGTG 3 cut(s) 485, 2136, 3781
Cac8I GCNNGC 6 cut(s) 855, 1484, 2134, 2781, 2879, 3772
CaiI CAGNNNCTG 1 cut(s) 2535
CciI TCATGA 4 cut(s) 2392, 2440, 2479, 3052
CfoI GCGC 2 cut(s) 2847, 3521
Cfr13I GGNCC 2 cut(s) 1580, 2053
CsiI ACCWGGT 2 cut(s) 820, 2499
Csp6I GTAC 7 cut(s) 73, 792, 1009, 1179, 1570, 3967, 4075
CviQI GTAC 7 cut(s) 73, 792, 1009, 1179, 1570, 3967, 4075
DinI GGCGCC 1 cut(s) 3520
DraI TTTAAA 2 cut(s) 577, 2913
DrdI GACNNNNNNGTC 1 cut(s) 1959
DseDI GACNNNNNNGTC 1 cut(s) 1959
EaeI YGGCCR 1 cut(s) 30
EagI CGGCCG 1 cut(s) 30
Eam1104I CTCTTC 7 cut(s) 107, 136, 444, 690, 771, 1383, 3240
EarI CTCTTC 7 cut(s) 107, 136, 444, 690, 771, 1383, 3240
Ecl136II GAGCTC 1 cut(s) 117
EclXI CGGCCG 1 cut(s) 30
Eco130I CCWWGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
Eco147I AGGCCT 1 cut(s) 3251
Eco24I GRGCYC 2 cut(s) 119, 1284
Eco31I GGTCTC 1 cut(s) 31
Eco47I GGWCC 2 cut(s) 1580, 2053
Eco52I CGGCCG 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 117
Eco88I CYCGRG 1 cut(s) 2594
EcoICRI GAGCTC 1 cut(s) 117
EcoNI CCTNNNNNAGG 1 cut(s) 3740
EcoRII CCWGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
EcoT14I CCWWGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
EcoT22I ATGCAT 4 cut(s) 226, 445, 805, 1162
EcoT38I GRGCYC 2 cut(s) 119, 1284
EgeI GGCGCC 1 cut(s) 3520
EheI GGCGCC 1 cut(s) 3520
ErhI CCWWGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
FalI AAGNNNNNCTT 8 cut(s) 318, 350, 353, 385, 1497, 1529, 3954, 3986
FaqI GGGAC 3 cut(s) 1045, 2127, 3682
FbaI TGATCA 1 cut(s) 904
FblI GTMKAC 5 cut(s) 381, 1016, 1339, 3790, 4011
FriOI GRGCYC 2 cut(s) 119, 1284
FspBI CTAG 5 cut(s) 728, 1730, 2310, 2559, 4053
GlaI GCGC 2 cut(s) 2846, 3520
GsuI CTGGAG 7 cut(s) 110, 158, 365, 567, 932, 1373, 2879
HaeII RGCGCY 1 cut(s) 3522
HaeIII GGCC 8 cut(s) 32, 809, 1711, 2918, 3002, 3200, 3251, 3394
HapII CCGG 1 cut(s) 2429
HhaI GCGC 2 cut(s) 2847, 3521
Hin1I GRCGYC 1 cut(s) 3519
Hin6I GCGC 2 cut(s) 2845, 3519
HinP1I GCGC 2 cut(s) 2845, 3519
HincII GTYRAC 3 cut(s) 411, 3835, 4066
HindII GTYRAC 3 cut(s) 411, 3835, 4066
HindIII AAGCTT 4 cut(s) 251, 740, 1496, 1694
HpaI GTTAAC 1 cut(s) 4066
HpaII CCGG 1 cut(s) 2429
HphI GGTGA 2 cut(s) 423, 2315
Hpy99I CGWCG 2 cut(s) 17, 3504
HpyCH4IV ACGT 7 cut(s) 606, 973, 1433, 3227, 3502, 3793, 3975
HpySE526I ACGT 7 cut(s) 606, 973, 1433, 3227, 3502, 3793, 3975
Hsp92I GRCGYC 1 cut(s) 3519
HspAI GCGC 2 cut(s) 2845, 3519
KasI GGCGCC 1 cut(s) 3518
Ksp22I TGATCA 1 cut(s) 904
KspAI GTTAAC 1 cut(s) 4066
LguI GCTCTTC 1 cut(s) 107
LmnI GCTCC 8 cut(s) 91, 122, 878, 1287, 2836, 2860, 3125, 3638
MabI ACCWGGT 2 cut(s) 820, 2499
MaeI CTAG 5 cut(s) 728, 1730, 2310, 2559, 4053
MaeII ACGT 7 cut(s) 606, 973, 1433, 3227, 3502, 3793, 3975
MfeI CAATTG 3 cut(s) 900, 1046, 1451
MflI RGATCY 5 cut(s) 239, 374, 1682, 2404, 2423
MhlI GDGCHC 9 cut(s) 119, 402, 487, 1232, 1284, 1319, 1408, 2272, 3678
Mly113I GGCGCC 1 cut(s) 3519
MlyI GAGTC 7 cut(s) 151, 757, 1022, 1669, 1727, 2353, 2987
MmeI TCCRAC 6 cut(s) 649, 2435, 2702, 2782, 2970, 3103
Mph1103I ATGCAT 4 cut(s) 226, 445, 805, 1162
MroXI GAANNNNTTC 4 cut(s) 453, 2107, 2632, 3294
MslI CAYNNNNRTG 5 cut(s) 2445, 2489, 3044, 3513, 3952
MspA1I CMGCKG 2 cut(s) 64, 665
MspI CCGG 1 cut(s) 2429
MspR9I CCNGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
MunI CAATTG 3 cut(s) 900, 1046, 1451
Mva1269I GAATGC 2 cut(s) 1251, 2710
MvaI CCWGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
MvnI CGCG 1 cut(s) 23
NarI GGCGCC 1 cut(s) 3519
NcoI CCATGG 1 cut(s) 3636
NlaIV GGNNCC 4 cut(s) 1283, 2269, 2838, 3520
NmeAIII GCCGAG 2 cut(s) 8, 74
NmuCI GTSAC 5 cut(s) 311, 645, 1539, 2345, 2577
NsiI ATGCAT 4 cut(s) 226, 445, 805, 1162
NspI RCATGY 4 cut(s) 531, 857, 1547, 1891
NspV TTCGAA 1 cut(s) 3439
PaeI GCATGC 1 cut(s) 857
PaeR7I CTCGAG 1 cut(s) 2594
PagI TCATGA 4 cut(s) 2392, 2440, 2479, 3052
PceI AGGCCT 1 cut(s) 3251
PciI ACATGT 1 cut(s) 527
PciSI GCTCTTC 1 cut(s) 107
PcsI WCGNNNNNNNCGW 1 cut(s) 3233
PctI GAATGC 2 cut(s) 1251, 2710
PdmI GAANNNNTTC 4 cut(s) 453, 2107, 2632, 3294
Pfl23II CGTACG 1 cut(s) 1178
PflFI GACNNNGTC 1 cut(s) 3731
PfoI TCCNGGA 2 cut(s) 948, 1827
PleI GAGTC 7 cut(s) 151, 757, 1021, 1668, 1727, 2352, 2986
PluTI GGCGCC 1 cut(s) 3522
PpsI GAGTC 7 cut(s) 151, 757, 1021, 1668, 1727, 2352, 2986
Ppu21I YACGTR 1 cut(s) 3794
PscI ACATGT 1 cut(s) 527
PshAI GACNNNNGTC 1 cut(s) 1306
PshBI ATTAAT 2 cut(s) 2757, 3042
PsiI TTATAA 2 cut(s) 2070, 2814
Psp124BI GAGCTC 1 cut(s) 119
Psp6I CCWGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
PspGI CCWGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
PspLI CGTACG 1 cut(s) 1178
PspN4I GGNNCC 4 cut(s) 1283, 2269, 2838, 3520
PspPI GGNCC 2 cut(s) 1580, 2053
PstI CTGCAG 2 cut(s) 664, 703
PstNI CAGNNNCTG 1 cut(s) 2535
PsuI RGATCY 5 cut(s) 239, 374, 1682, 2404, 2423
PsyI GACNNNGTC 1 cut(s) 3731
PvuII CAGCTG 2 cut(s) 64, 665
RsaI GTAC 7 cut(s) 74, 793, 1010, 1180, 1571, 3968, 4076
RsaNI GTAC 7 cut(s) 73, 792, 1009, 1179, 1570, 3967, 4075
RseI CAYNNNNRTG 5 cut(s) 2445, 2489, 3044, 3513, 3952
SacI GAGCTC 1 cut(s) 119
SapI GCTCTTC 1 cut(s) 107
Sau96I GGNCC 2 cut(s) 1580, 2053
SchI GAGTC 7 cut(s) 151, 757, 1022, 1669, 1727, 2353, 2987
ScrFI CCNGG 7 cut(s) 822, 950, 1286, 1829, 2501, 3401, 3665
SduI GDGCHC 9 cut(s) 119, 402, 487, 1232, 1284, 1319, 1408, 2272, 3678
SexAI ACCWGGT 2 cut(s) 820, 2499
SfcI CTRYAG 5 cut(s) 378, 641, 660, 699, 3453
SfoI GGCGCC 1 cut(s) 3520
Sfr274I CTCGAG 1 cut(s) 2594
SfuI TTCGAA 1 cut(s) 3439
SinI GGWCC 2 cut(s) 1580, 2053
SlaI CTCGAG 1 cut(s) 2594
SmiMI CAYNNNNRTG 5 cut(s) 2445, 2489, 3044, 3513, 3952
SmlI CTYRAG 4 cut(s) 401, 2594, 2864, 3737
SmoI CTYRAG 4 cut(s) 401, 2594, 2864, 3737
SphI GCATGC 1 cut(s) 857
SseBI AGGCCT 1 cut(s) 3251
SsiI CCGC 4 cut(s) 23, 1883, 2056, 3671
SspDI GGCGCC 1 cut(s) 3518
SspI AATATT 2 cut(s) 2195, 3305
SspMI CTAG 5 cut(s) 728, 1730, 2310, 2559, 4053
SstI GAGCTC 1 cut(s) 119
StuI AGGCCT 1 cut(s) 3251
StyD4I CCNGG 7 cut(s) 820, 948, 1284, 1827, 2499, 3399, 3663
StyI CCWWGG 5 cut(s) 1895, 2539, 2934, 3201, 3636
TaiI ACGT 7 cut(s) 609, 976, 1436, 3230, 3505, 3796, 3978
TatI WGTACW 2 cut(s) 1569, 4074
TseFI GTSAC 5 cut(s) 311, 645, 1539, 2345, 2577
Tsp45I GTSAC 5 cut(s) 311, 645, 1539, 2345, 2577
TspGWI ACGGA 1 cut(s) 192
Tth111I GACNNNGTC 1 cut(s) 3731
VneI GTGCAC 2 cut(s) 1315, 1404
VpaK11BI GGWCC 2 cut(s) 1580, 2053
VspI ATTAAT 2 cut(s) 2757, 3042
XagI CCTNNNNNAGG 1 cut(s) 3740
XbaI TCTAGA 1 cut(s) 4052
XceI RCATGY 4 cut(s) 531, 857, 1547, 1891
XhoI CTCGAG 1 cut(s) 2594
XmiI GTMKAC 5 cut(s) 381, 1016, 1339, 3790, 4011
XmnI GAANNNNTTC 4 cut(s) 453, 2107, 2632, 3294
XspI CTAG 5 cut(s) 728, 1730, 2310, 2559, 4053
Zsp2I ATGCAT 4 cut(s) 226, 445, 805, 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.