ARM repeat superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79190 AT1G79190 |
| fragaria_vesca | FvH4_3g15310 FvH4_3g15310 |
| malus_domestica | MD05G1224200.v1.1 |
| prunus_persica | Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 |
| pyrus_communis | pycom05g20690 |
| rosa_chinensis | RchiOBHm_Chr5g0025751 |
| rosa_laevigata | RLG00000032869 |
| rosa_multiflora | Rmu_sc0005580.1_g000012 Rmu_sc0005879.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00053440 Rroxscaffold_1G00054310 |
| rosa_rugosa | Rorug05G0088300 |
| rosa_samantha | Rh5AG180200 Rh5BG178900 Rh5CG196700 Rh5DG178600 |
| rosa_wichuraiana | Rw5G016350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1710 |
| AarI | CACCTGC | 1 cut(s) | 1031 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1599 |
| Acc36I | ACCTGC | 1 cut(s) | 1031 |
| AccI | GTMKAC | 3 cut(s) | 656, 979, 3430 |
| AccIII | TCCGGA | 1 cut(s) | 608 |
| AciI | CCGC | 3 cut(s) | 1696, 2202, 3311 |
| AclWI | GGATC | 4 cut(s) | 1245, 1330, 2052, 3470 |
| AcoI | YGGCCR | 2 cut(s) | 1461, 1909 |
| AcuI | CTGAAG | 6 cut(s) | 234, 1047, 1232, 2796, 3249, 3342 |
| AfaI | GTAC | 6 cut(s) | 245, 433, 820, 1211, 2409, 3608 |
| AfeI | AGCGCT | 1 cut(s) | 2272 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1702, 2806, 2988, 3168, 3310 |
| AflIII | ACRYGT | 2 cut(s) | 167, 2625 |
| AjnI | CCWGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 232, 264 |
| Alw21I | GWGCWC | 4 cut(s) | 42, 959, 1048, 3318 |
| Alw26I | GTCTC | 3 cut(s) | 907, 1257, 2694 |
| Alw44I | GTGCAC | 2 cut(s) | 955, 1044 |
| AlwI | GGATC | 4 cut(s) | 1245, 1330, 2052, 3470 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2175, 3074 |
| Ama87I | CYCGRG | 1 cut(s) | 2234 |
| Aor13HI | TCCGGA | 1 cut(s) | 608 |
| Aor51HI | AGCGCT | 1 cut(s) | 2272 |
| AoxI | GGCC | 5 cut(s) | 447, 1349, 1461, 1909, 3032 |
| ApaLI | GTGCAC | 2 cut(s) | 955, 1044 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 169, 201 |
| AseI | ATTAAT | 1 cut(s) | 2682 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 93, 396, 1747, 2272, 2934 |
| AspLEI | GCGC | 2 cut(s) | 2273, 2487 |
| AspS9I | GGNCC | 2 cut(s) | 1220, 1693 |
| AsuHPI | GGTGA | 4 cut(s) | 63, 1955, 2198, 3534 |
| AsuII | TTCGAA | 2 cut(s) | 3055, 3079 |
| AvaI | CYCGRG | 1 cut(s) | 2234 |
| AvaII | GGWCC | 2 cut(s) | 1220, 1693 |
| BaeGI | GKGCMC | 4 cut(s) | 127, 872, 959, 1048 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2006, 2039 |
| BalI | TGGCCA | 1 cut(s) | 1911 |
| BanII | GRGCYC | 1 cut(s) | 924 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2031, 2063, 3438, 3470 |
| BauI | CACGAG | 1 cut(s) | 357 |
| Bbv12I | GWGCWC | 4 cut(s) | 42, 959, 1048, 3318 |
| BbvCI | CCTCAGC | 2 cut(s) | 968, 2094 |
| BccI | CCATC | 7 cut(s) | 22, 82, 1360, 1472, 2852, 3149, 3575 |
| BceAI | ACGGC | 1 cut(s) | 1476 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 870, 904 |
| BciT130I | CCWGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| BclI | TGATCA | 1 cut(s) | 544 |
| BcoDI | GTCTC | 3 cut(s) | 907, 1257, 2694 |
| BfaI | CTAG | 5 cut(s) | 368, 1370, 1950, 2199, 3693 |
| BfmI | CTRYAG | 9 cut(s) | 22, 281, 300, 339, 1038, 2135, 2559, 3093, 3244 |
| BfoI | RGCGCY | 1 cut(s) | 2274 |
| BfuAI | ACCTGC | 1 cut(s) | 1031 |
| BglII | AGATCT | 1 cut(s) | 2063 |
| BlpI | GCTNAGC | 1 cut(s) | 1188 |
| Bme1390I | CCNGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| Bme18I | GGWCC | 2 cut(s) | 1220, 1693 |
| BmeT110I | CYCGRG | 1 cut(s) | 2234 |
| BmgT120I | GGNCC | 2 cut(s) | 1220, 1693 |
| BmiI | GGNNCC | 3 cut(s) | 923, 2478, 3160 |
| BmrFI | CCNGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| BmrI | ACTGGG | 1 cut(s) | 1673 |
| BmuI | ACTGGG | 1 cut(s) | 1673 |
| BoxI | GACNNNNGTC | 1 cut(s) | 946 |
| BpmI | CTGGAG | 2 cut(s) | 1013, 2519 |
| Bpu10I | CCTNAGC | 3 cut(s) | 423, 968, 2094 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1188 |
| Bpu14I | TTCGAA | 2 cut(s) | 3055, 3079 |
| BpuEI | CTTGAG | 3 cut(s) | 26, 2525, 3362 |
| Bsa29I | ATCGAT | 1 cut(s) | 1017 |
| BsaAI | YACGTR | 1 cut(s) | 3434 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3480 |
| BsaJI | CCNNGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| BsaWI | WCCGGW | 1 cut(s) | 608 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 906, 936 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1702, 2806, 2988, 3168, 3310 |
| Bse1I | ACTGG | 9 cut(s) | 320, 513, 729, 1410, 1668, 1750, 2775, 3068, 3258 |
| Bse3DI | GCAATG | 4 cut(s) | 2433, 2600, 3024, 3109 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3480 |
| BseAI | TCCGGA | 1 cut(s) | 608 |
| BseBI | CCWGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| BseCI | ATCGAT | 1 cut(s) | 1017 |
| BseDI | CCNNGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| BseJI | GATNNNNATC | 1 cut(s) | 3480 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1702, 2806, 2988, 3168, 3310 |
| BseMI | GCAATG | 4 cut(s) | 2433, 2600, 3024, 3109 |
| BseNI | ACTGG | 9 cut(s) | 320, 513, 729, 1410, 1668, 1750, 2775, 3068, 3258 |
| BseRI | GAGGAG | 1 cut(s) | 2489 |
| BseSI | GKGCMC | 4 cut(s) | 127, 872, 959, 1048 |
| BsgI | GTGCAG | 2 cut(s) | 148, 339 |
| BshFI | GGCC | 5 cut(s) | 449, 1351, 1463, 1911, 3034 |
| BshVI | ATCGAT | 1 cut(s) | 1017 |
| BsiHKAI | GWGCWC | 4 cut(s) | 42, 959, 1048, 3318 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2234 |
| BsiSI | CCGG | 1 cut(s) | 609 |
| BsiWI | CGTACG | 1 cut(s) | 818 |
| BslFI | GGGAC | 1 cut(s) | 3322 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1702, 2806, 2988, 3168, 3310 |
| BsmAI | GTCTC | 3 cut(s) | 907, 1257, 2694 |
| BsmFI | GGGAC | 1 cut(s) | 3322 |
| BsmI | GAATGC | 2 cut(s) | 891, 2350 |
| BsnI | GGCC | 5 cut(s) | 449, 1351, 1463, 1911, 3034 |
| BsoBI | CYCGRG | 1 cut(s) | 2234 |
| Bsp119I | TTCGAA | 2 cut(s) | 3055, 3079 |
| Bsp1286I | GDGCHC | 7 cut(s) | 42, 127, 872, 924, 959, 1048, 3318 |
| Bsp13I | TCCGGA | 1 cut(s) | 608 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1188 |
| BspACI | CCGC | 3 cut(s) | 1696, 2202, 3311 |
| BspANI | GGCC | 5 cut(s) | 449, 1351, 1463, 1911, 3034 |
| BspDI | ATCGAT | 1 cut(s) | 1017 |
| BspEI | TCCGGA | 1 cut(s) | 608 |
| BspHI | TCATGA | 2 cut(s) | 2032, 2080 |
| BspLI | GGNNCC | 3 cut(s) | 923, 2478, 3160 |
| BspMAI | CTGCAG | 3 cut(s) | 304, 343, 1042 |
| BspMI | ACCTGC | 1 cut(s) | 1031 |
| BspPI | GGATC | 4 cut(s) | 1245, 1330, 2052, 3470 |
| BspT104I | TTCGAA | 2 cut(s) | 3055, 3079 |
| BsrDI | GCAATG | 4 cut(s) | 2433, 2600, 3024, 3109 |
| BsrI | ACTGG | 9 cut(s) | 320, 513, 729, 1410, 1668, 1750, 2775, 3068, 3258 |
| BssECI | CCNNGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| BssSI | CACGAG | 1 cut(s) | 357 |
| BssT1I | CCWWGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| Bst2BI | CACGAG | 1 cut(s) | 357 |
| Bst2UI | CCWGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| Bst6I | CTCTTC | 6 cut(s) | 84, 330, 411, 1023, 2808, 2880 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1778 |
| BstBAI | YACGTR | 1 cut(s) | 3434 |
| BstBI | TTCGAA | 2 cut(s) | 3055, 3079 |
| BstC8I | GCNNGC | 6 cut(s) | 495, 705, 1124, 1774, 2421, 2519 |
| BstH2I | RGCGCY | 1 cut(s) | 2274 |
| BstHHI | GCGC | 2 cut(s) | 2273, 2487 |
| BstMAI | GTCTC | 3 cut(s) | 907, 1257, 2694 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 299, 302, 1773, 1778, 2279, 2570 |
| BstNI | CCWGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| BstNSI | RCATGY | 5 cut(s) | 171, 497, 707, 1531, 2629 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 946 |
| BstSCI | CCNGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| BstSFI | CTRYAG | 9 cut(s) | 22, 281, 300, 339, 1038, 2135, 2559, 3093, 3244 |
| BstSLI | GKGCMC | 4 cut(s) | 127, 872, 959, 1048 |
| BstX2I | RGATCY | 3 cut(s) | 1322, 2044, 2063 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3155 |
| BstYI | RGATCY | 3 cut(s) | 1322, 2044, 2063 |
| Bsu15I | ATCGAT | 1 cut(s) | 1017 |
| BsuRI | GGCC | 5 cut(s) | 449, 1351, 1463, 1911, 3034 |
| BsuTUI | ATCGAT | 1 cut(s) | 1017 |
| BtsI | GCAGTG | 4 cut(s) | 125, 379, 1776, 3421 |
| BveI | ACCTGC | 1 cut(s) | 1031 |
| Cac8I | GCNNGC | 6 cut(s) | 495, 705, 1124, 1774, 2421, 2519 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2175, 3074 |
| CciI | TCATGA | 2 cut(s) | 2032, 2080 |
| CfoI | GCGC | 2 cut(s) | 2273, 2487 |
| Cfr13I | GGNCC | 2 cut(s) | 1220, 1693 |
| ClaI | ATCGAT | 1 cut(s) | 1017 |
| CseI | GACGC | 3 cut(s) | 449, 2099, 3456 |
| Csp6I | GTAC | 6 cut(s) | 244, 432, 819, 1210, 2408, 3607 |
| CviQI | GTAC | 6 cut(s) | 244, 432, 819, 1210, 2408, 3607 |
| DraI | TTTAAA | 1 cut(s) | 2553 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1599 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1599 |
| EaeI | YGGCCR | 2 cut(s) | 1461, 1909 |
| Eam1104I | CTCTTC | 6 cut(s) | 84, 330, 411, 1023, 2808, 2880 |
| EarI | CTCTTC | 6 cut(s) | 84, 330, 411, 1023, 2808, 2880 |
| Eco130I | CCWWGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| Eco24I | GRGCYC | 1 cut(s) | 924 |
| Eco47I | GGWCC | 2 cut(s) | 1220, 1693 |
| Eco47III | AGCGCT | 1 cut(s) | 2272 |
| Eco57I | CTGAAG | 6 cut(s) | 234, 1047, 1232, 2796, 3249, 3342 |
| Eco88I | CYCGRG | 1 cut(s) | 2234 |
| EcoRI | GAATTC | 1 cut(s) | 1855 |
| EcoRII | CCWGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| EcoT14I | CCWWGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| EcoT22I | ATGCAT | 1 cut(s) | 802 |
| EcoT38I | GRGCYC | 1 cut(s) | 924 |
| ErhI | CCWWGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1137, 1169, 3340, 3372, 3594, 3626 |
| FaqI | GGGAC | 1 cut(s) | 3322 |
| FbaI | TGATCA | 1 cut(s) | 544 |
| FblI | GTMKAC | 3 cut(s) | 656, 979, 3430 |
| FriOI | GRGCYC | 1 cut(s) | 924 |
| FspBI | CTAG | 5 cut(s) | 368, 1370, 1950, 2199, 3693 |
| GlaI | GCGC | 2 cut(s) | 2272, 2486 |
| GsuI | CTGGAG | 2 cut(s) | 1013, 2519 |
| HaeII | RGCGCY | 1 cut(s) | 2274 |
| HaeIII | GGCC | 5 cut(s) | 449, 1351, 1463, 1911, 3034 |
| HapII | CCGG | 1 cut(s) | 609 |
| HgaI | GACGC | 3 cut(s) | 449, 2099, 3456 |
| HhaI | GCGC | 2 cut(s) | 2273, 2487 |
| Hin6I | GCGC | 2 cut(s) | 2271, 2485 |
| HinP1I | GCGC | 2 cut(s) | 2271, 2485 |
| HincII | GTYRAC | 3 cut(s) | 16, 51, 3652 |
| HindII | GTYRAC | 3 cut(s) | 16, 51, 3652 |
| HindIII | AAGCTT | 2 cut(s) | 1136, 1403 |
| HpaII | CCGG | 1 cut(s) | 609 |
| HphI | GGTGA | 4 cut(s) | 63, 1955, 2198, 3534 |
| Hpy99I | CGWCG | 1 cut(s) | 3144 |
| HpyCH4IV | ACGT | 3 cut(s) | 2587, 3142, 3433 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 299, 302, 1773, 1778, 2279, 2570 |
| HpySE526I | ACGT | 3 cut(s) | 2587, 3142, 3433 |
| HspAI | GCGC | 2 cut(s) | 2271, 2485 |
| Kpn2I | TCCGGA | 1 cut(s) | 608 |
| Ksp22I | TGATCA | 1 cut(s) | 544 |
| LmnI | GCTCC | 5 cut(s) | 518, 927, 2476, 2500, 3164 |
| MaeI | CTAG | 5 cut(s) | 368, 1370, 1950, 2199, 3693 |
| MaeII | ACGT | 3 cut(s) | 2587, 3142, 3433 |
| MfeI | CAATTG | 4 cut(s) | 540, 686, 1091, 2922 |
| MflI | RGATCY | 3 cut(s) | 1322, 2044, 2063 |
| MhlI | GDGCHC | 7 cut(s) | 42, 127, 872, 924, 959, 1048, 3318 |
| MlsI | TGGCCA | 1 cut(s) | 1911 |
| MluNI | TGGCCA | 1 cut(s) | 1911 |
| MlyI | GAGTC | 7 cut(s) | 397, 662, 1016, 1309, 1367, 1993, 2627 |
| MmeI | TCCRAC | 4 cut(s) | 289, 1060, 2075, 2610 |
| Mox20I | TGGCCA | 1 cut(s) | 1911 |
| Mph1103I | ATGCAT | 1 cut(s) | 802 |
| MroI | TCCGGA | 1 cut(s) | 608 |
| MroXI | GAANNNNTTC | 5 cut(s) | 93, 396, 1747, 2272, 2934 |
| MscI | TGGCCA | 1 cut(s) | 1911 |
| MseI | TTAA | 9 cut(s) | 111, 1401, 1979, 2397, 2537, 2552, 2682, 2727, 3703 |
| MslI | CAYNNNNRTG | 5 cut(s) | 2085, 2129, 2684, 3153, 3592 |
| Msp20I | TGGCCA | 1 cut(s) | 1911 |
| MspA1I | CMGCKG | 1 cut(s) | 305 |
| MspI | CCGG | 1 cut(s) | 609 |
| MspR9I | CCNGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| MunI | CAATTG | 4 cut(s) | 540, 686, 1091, 2922 |
| Mva1269I | GAATGC | 2 cut(s) | 891, 2350 |
| MvaI | CCWGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 299, 302, 1773, 1778, 2279, 2570 |
| NlaIV | GGNNCC | 3 cut(s) | 923, 2478, 3160 |
| NmuCI | GTSAC | 6 cut(s) | 285, 1179, 1648, 1985, 2120, 2217 |
| NsiI | ATGCAT | 1 cut(s) | 802 |
| NspI | RCATGY | 5 cut(s) | 171, 497, 707, 1531, 2629 |
| NspV | TTCGAA | 2 cut(s) | 3055, 3079 |
| PaeI | GCATGC | 2 cut(s) | 497, 707 |
| PaeR7I | CTCGAG | 1 cut(s) | 2234 |
| PagI | TCATGA | 2 cut(s) | 2032, 2080 |
| PaqCI | CACCTGC | 1 cut(s) | 1031 |
| PciI | ACATGT | 2 cut(s) | 167, 2625 |
| PctI | GAATGC | 2 cut(s) | 891, 2350 |
| PdmI | GAANNNNTTC | 5 cut(s) | 93, 396, 1747, 2272, 2934 |
| Pfl23II | CGTACG | 1 cut(s) | 818 |
| PflFI | GACNNNGTC | 1 cut(s) | 3371 |
| PfoI | TCCNGGA | 1 cut(s) | 1467 |
| PleI | GAGTC | 7 cut(s) | 397, 661, 1016, 1308, 1367, 1992, 2626 |
| PpsI | GAGTC | 7 cut(s) | 397, 661, 1016, 1308, 1367, 1992, 2626 |
| Ppu21I | YACGTR | 1 cut(s) | 3434 |
| PscI | ACATGT | 2 cut(s) | 167, 2625 |
| PshAI | GACNNNNGTC | 1 cut(s) | 946 |
| PshBI | ATTAAT | 1 cut(s) | 2682 |
| PsiI | TTATAA | 1 cut(s) | 1710 |
| Psp6I | CCWGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| PspGI | CCWGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| PspLI | CGTACG | 1 cut(s) | 818 |
| PspN4I | GGNNCC | 3 cut(s) | 923, 2478, 3160 |
| PspPI | GGNCC | 2 cut(s) | 1220, 1693 |
| PstI | CTGCAG | 3 cut(s) | 304, 343, 1042 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2175, 3074 |
| PsuI | RGATCY | 3 cut(s) | 1322, 2044, 2063 |
| PsyI | GACNNNGTC | 1 cut(s) | 3371 |
| PvuII | CAGCTG | 1 cut(s) | 305 |
| RsaI | GTAC | 6 cut(s) | 245, 433, 820, 1211, 2409, 3608 |
| RsaNI | GTAC | 6 cut(s) | 244, 432, 819, 1210, 2408, 3607 |
| RseI | CAYNNNNRTG | 5 cut(s) | 2085, 2129, 2684, 3153, 3592 |
| SaqAI | TTAA | 9 cut(s) | 111, 1401, 1979, 2397, 2537, 2552, 2682, 2727, 3703 |
| Sau96I | GGNCC | 2 cut(s) | 1220, 1693 |
| SchI | GAGTC | 7 cut(s) | 397, 662, 1016, 1309, 1367, 1993, 2627 |
| ScrFI | CCNGG | 6 cut(s) | 462, 926, 1469, 1769, 3041, 3305 |
| SduI | GDGCHC | 7 cut(s) | 42, 127, 872, 924, 959, 1048, 3318 |
| SfcI | CTRYAG | 9 cut(s) | 22, 281, 300, 339, 1038, 2135, 2559, 3093, 3244 |
| Sfr274I | CTCGAG | 1 cut(s) | 2234 |
| SfuI | TTCGAA | 2 cut(s) | 3055, 3079 |
| SinI | GGWCC | 2 cut(s) | 1220, 1693 |
| SlaI | CTCGAG | 1 cut(s) | 2234 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 2085, 2129, 2684, 3153, 3592 |
| SmlI | CTYRAG | 4 cut(s) | 41, 2234, 2504, 3377 |
| SmoI | CTYRAG | 4 cut(s) | 41, 2234, 2504, 3377 |
| SphI | GCATGC | 2 cut(s) | 497, 707 |
| SsiI | CCGC | 3 cut(s) | 1696, 2202, 3311 |
| SspI | AATATT | 1 cut(s) | 1835 |
| SspMI | CTAG | 5 cut(s) | 368, 1370, 1950, 2199, 3693 |
| StyD4I | CCNGG | 6 cut(s) | 460, 924, 1467, 1767, 3039, 3303 |
| StyI | CCWWGG | 4 cut(s) | 1535, 2179, 2574, 2841 |
| TaiI | ACGT | 3 cut(s) | 2590, 3145, 3436 |
| TatI | WGTACW | 1 cut(s) | 1209 |
| Tru1I | TTAA | 9 cut(s) | 111, 1401, 1979, 2397, 2537, 2552, 2682, 2727, 3703 |
| Tru9I | TTAA | 9 cut(s) | 111, 1401, 1979, 2397, 2537, 2552, 2682, 2727, 3703 |
| TseFI | GTSAC | 6 cut(s) | 285, 1179, 1648, 1985, 2120, 2217 |
| Tsp45I | GTSAC | 6 cut(s) | 285, 1179, 1648, 1985, 2120, 2217 |
| TspGWI | ACGGA | 2 cut(s) | 836, 2672 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3371 |
| VneI | GTGCAC | 2 cut(s) | 955, 1044 |
| VpaK11BI | GGWCC | 2 cut(s) | 1220, 1693 |
| VspI | ATTAAT | 1 cut(s) | 2682 |
| XceI | RCATGY | 5 cut(s) | 171, 497, 707, 1531, 2629 |
| XhoI | CTCGAG | 1 cut(s) | 2234 |
| XmiI | GTMKAC | 3 cut(s) | 656, 979, 3430 |
| XmnI | GAANNNNTTC | 5 cut(s) | 93, 396, 1747, 2272, 2934 |
| XspI | CTAG | 5 cut(s) | 368, 1370, 1950, 2199, 3693 |
| Zsp2I | ATGCAT | 1 cut(s) | 802 |