ARM repeat superfamily protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79190 AT1G79190 |
| fragaria_vesca | FvH4_3g15310 FvH4_3g15310 |
| malus_domestica | MD05G1224200.v1.1 |
| prunus_persica | Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 Prupe.4G136200_v2.0.a1 |
| pyrus_communis | pycom05g20690 |
| rosa_chinensis | RchiOBHm_Chr5g0025751 |
| rosa_laevigata | RLG00000032869 |
| rosa_multiflora | Rmu_sc0005580.1_g000012 Rmu_sc0005879.1_g000007 |
| rosa_roxburghii | Rroxscaffold_1G00053440 Rroxscaffold_1G00054310 |
| rosa_rugosa | Rorug05G0088300 |
| rosa_samantha | Rh5AG180200 Rh5BG178900 Rh5CG196700 Rh5DG178600 |
| rosa_wichuraiana | Rw5G016350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2070 |
| AarI | CACCTGC | 1 cut(s) | 1391 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1959 |
| Acc36I | ACCTGC | 2 cut(s) | 1391, 2491 |
| AccI | GTMKAC | 3 cut(s) | 1016, 1339, 3790 |
| AciI | CCGC | 3 cut(s) | 2056, 2562, 3671 |
| AclWI | GGATC | 6 cut(s) | 234, 382, 1605, 1690, 2412, 3830 |
| AcoI | YGGCCR | 3 cut(s) | 30, 1821, 2269 |
| AcuI | CTGAAG | 9 cut(s) | 282, 320, 345, 594, 1407, 1592, 3156, 3609, 3702 |
| AdeI | CACNNNGTG | 1 cut(s) | 363 |
| AfaI | GTAC | 9 cut(s) | 74, 605, 793, 1180, 1231, 1571, 2769, 3968, 4076 |
| AfeI | AGCGCT | 1 cut(s) | 2632 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 2062, 3166, 3348, 3528, 3670 |
| AflIII | ACRYGT | 2 cut(s) | 527, 2985 |
| AjiI | CACGTC | 1 cut(s) | 974 |
| AjnI | CCWGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 592, 624 |
| Alw21I | GWGCWC | 5 cut(s) | 119, 402, 1319, 1408, 3678 |
| Alw26I | GTCTC | 5 cut(s) | 31, 371, 1267, 1617, 3054 |
| Alw44I | GTGCAC | 2 cut(s) | 1315, 1404 |
| AlwI | GGATC | 6 cut(s) | 234, 382, 1605, 1690, 2412, 3830 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 343, 3434 |
| Ama87I | CYCGRG | 1 cut(s) | 2594 |
| Aor51HI | AGCGCT | 1 cut(s) | 2632 |
| AoxI | GGCC | 6 cut(s) | 30, 807, 1709, 1821, 2269, 3392 |
| ApaLI | GTGCAC | 2 cut(s) | 1315, 1404 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 9, 41, 529, 561 |
| AseI | ATTAAT | 2 cut(s) | 2757, 3042 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 453, 756, 2107, 2632, 3294 |
| AspLEI | GCGC | 3 cut(s) | 153, 2633, 2847 |
| AspS9I | GGNCC | 2 cut(s) | 1580, 2053 |
| AsuHPI | GGTGA | 5 cut(s) | 423, 1166, 2315, 2558, 3894 |
| AsuII | TTCGAA | 2 cut(s) | 3415, 3439 |
| AvaI | CYCGRG | 1 cut(s) | 2594 |
| AvaII | GGWCC | 2 cut(s) | 1580, 2053 |
| BaeGI | GKGCMC | 3 cut(s) | 487, 1319, 1408 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2366, 2399 |
| BalI | TGGCCA | 1 cut(s) | 2271 |
| BanII | GRGCYC | 2 cut(s) | 119, 1284 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2391, 2423, 3798, 3830 |
| BauI | CACGAG | 1 cut(s) | 717 |
| Bbv12I | GWGCWC | 5 cut(s) | 119, 402, 1319, 1408, 3678 |
| BbvCI | CCTCAGC | 2 cut(s) | 1328, 2454 |
| BccI | CCATC | 6 cut(s) | 382, 442, 1720, 1832, 3212, 3509 |
| BceAI | ACGGC | 1 cut(s) | 1836 |
| BcgI | CGANNNNNNTGC | 3 cut(s) | 36, 1230, 1264 |
| BciT130I | CCWGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| BclI | TGATCA | 1 cut(s) | 904 |
| BcoDI | GTCTC | 5 cut(s) | 31, 371, 1267, 1617, 3054 |
| BfaI | CTAG | 5 cut(s) | 728, 1730, 2310, 2559, 4055 |
| BfmI | CTRYAG | 9 cut(s) | 378, 641, 660, 699, 1398, 2495, 2919, 3453, 3604 |
| BfoI | RGCGCY | 1 cut(s) | 2634 |
| BfuAI | ACCTGC | 2 cut(s) | 1391, 2491 |
| BglII | AGATCT | 1 cut(s) | 2423 |
| BlpI | GCTNAGC | 1 cut(s) | 1548 |
| Bme1390I | CCNGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| Bme18I | GGWCC | 2 cut(s) | 1580, 2053 |
| BmeT110I | CYCGRG | 1 cut(s) | 2594 |
| BmgBI | CACGTC | 1 cut(s) | 974 |
| BmgT120I | GGNCC | 2 cut(s) | 1580, 2053 |
| BmiI | GGNNCC | 3 cut(s) | 1283, 2838, 3520 |
| BmrFI | CCNGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| BmrI | ACTGGG | 1 cut(s) | 2033 |
| BmuI | ACTGGG | 1 cut(s) | 2033 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1306 |
| BpmI | CTGGAG | 5 cut(s) | 110, 158, 365, 1373, 2879 |
| Bpu10I | CCTNAGC | 3 cut(s) | 783, 1328, 2454 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1548 |
| Bpu14I | TTCGAA | 2 cut(s) | 3415, 3439 |
| BpuEI | CTTGAG | 3 cut(s) | 386, 2885, 3722 |
| BsaAI | YACGTR | 1 cut(s) | 3794 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3448, 3840 |
| BsaJI | CCNNGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1266, 1296 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 2062, 3166, 3348, 3528, 3670 |
| Bse1I | ACTGG | 8 cut(s) | 680, 873, 1089, 2028, 2110, 3135, 3428, 3618 |
| Bse3DI | GCAATG | 5 cut(s) | 203, 2793, 2960, 3384, 3469 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3448, 3840 |
| BseBI | CCWGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| BseDI | CCNNGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| BseJI | GATNNNNATC | 2 cut(s) | 3448, 3840 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 2062, 3166, 3348, 3528, 3670 |
| BseMI | GCAATG | 5 cut(s) | 203, 2793, 2960, 3384, 3469 |
| BseNI | ACTGG | 8 cut(s) | 680, 873, 1089, 2028, 2110, 3135, 3428, 3618 |
| BseRI | GAGGAG | 4 cut(s) | 20, 109, 344, 2849 |
| BseSI | GKGCMC | 3 cut(s) | 487, 1319, 1408 |
| BseX3I | CGGCCG | 1 cut(s) | 30 |
| BsgI | GTGCAG | 2 cut(s) | 508, 699 |
| Bsh1285I | CGRYCG | 1 cut(s) | 33 |
| BshFI | GGCC | 6 cut(s) | 32, 809, 1711, 1823, 2271, 3394 |
| BsiEI | CGRYCG | 1 cut(s) | 33 |
| BsiHKAI | GWGCWC | 5 cut(s) | 119, 402, 1319, 1408, 3678 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2594 |
| BsiWI | CGTACG | 1 cut(s) | 1178 |
| BslFI | GGGAC | 1 cut(s) | 3682 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 2062, 3166, 3348, 3528, 3670 |
| BsmAI | GTCTC | 5 cut(s) | 31, 371, 1267, 1617, 3054 |
| BsmFI | GGGAC | 1 cut(s) | 3682 |
| BsmI | GAATGC | 2 cut(s) | 1251, 2710 |
| BsnI | GGCC | 6 cut(s) | 32, 809, 1711, 1823, 2271, 3394 |
| BsoBI | CYCGRG | 1 cut(s) | 2594 |
| Bsp119I | TTCGAA | 2 cut(s) | 3415, 3439 |
| Bsp1286I | GDGCHC | 7 cut(s) | 119, 402, 487, 1284, 1319, 1408, 3678 |
| Bsp1407I | TGTACA | 1 cut(s) | 4074 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1548 |
| BspACI | CCGC | 3 cut(s) | 2056, 2562, 3671 |
| BspANI | GGCC | 6 cut(s) | 32, 809, 1711, 1823, 2271, 3394 |
| BspHI | TCATGA | 3 cut(s) | 2392, 2440, 2479 |
| BspLI | GGNNCC | 3 cut(s) | 1283, 2838, 3520 |
| BspMAI | CTGCAG | 3 cut(s) | 664, 703, 1402 |
| BspMI | ACCTGC | 2 cut(s) | 1391, 2491 |
| BspPI | GGATC | 6 cut(s) | 234, 382, 1605, 1690, 2412, 3830 |
| BspQI | GCTCTTC | 1 cut(s) | 107 |
| BspT104I | TTCGAA | 2 cut(s) | 3415, 3439 |
| BsrDI | GCAATG | 5 cut(s) | 203, 2793, 2960, 3384, 3469 |
| BsrGI | TGTACA | 1 cut(s) | 4074 |
| BsrI | ACTGG | 8 cut(s) | 680, 873, 1089, 2028, 2110, 3135, 3428, 3618 |
| BssECI | CCNNGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| BssSI | CACGAG | 1 cut(s) | 717 |
| BssT1I | CCWWGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| Bst2BI | CACGAG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| Bst6I | CTCTTC | 8 cut(s) | 107, 136, 444, 690, 771, 1383, 3168, 3240 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2138 |
| BstAUI | TGTACA | 1 cut(s) | 4074 |
| BstBAI | YACGTR | 1 cut(s) | 3794 |
| BstBI | TTCGAA | 2 cut(s) | 3415, 3439 |
| BstC8I | GCNNGC | 7 cut(s) | 855, 1065, 1484, 2134, 2781, 2879, 3772 |
| BstH2I | RGCGCY | 1 cut(s) | 2634 |
| BstHHI | GCGC | 3 cut(s) | 153, 2633, 2847 |
| BstMAI | GTCTC | 5 cut(s) | 31, 371, 1267, 1617, 3054 |
| BstMCI | CGRYCG | 1 cut(s) | 33 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 29, 91, 659, 662, 2133, 2138, 2639, 2930 |
| BstNI | CCWGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| BstNSI | RCATGY | 5 cut(s) | 531, 857, 1067, 1891, 2989 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1306 |
| BstSCI | CCNGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| BstSFI | CTRYAG | 9 cut(s) | 378, 641, 660, 699, 1398, 2495, 2919, 3453, 3604 |
| BstSLI | GKGCMC | 3 cut(s) | 487, 1319, 1408 |
| BstX2I | RGATCY | 5 cut(s) | 239, 374, 1682, 2404, 2423 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3515 |
| BstYI | RGATCY | 5 cut(s) | 239, 374, 1682, 2404, 2423 |
| BstZI | CGGCCG | 1 cut(s) | 30 |
| BsuRI | GGCC | 6 cut(s) | 32, 809, 1711, 1823, 2271, 3394 |
| BtrI | CACGTC | 1 cut(s) | 974 |
| BtsI | GCAGTG | 4 cut(s) | 485, 739, 2136, 3781 |
| BveI | ACCTGC | 2 cut(s) | 1391, 2491 |
| Cac8I | GCNNGC | 7 cut(s) | 855, 1065, 1484, 2134, 2781, 2879, 3772 |
| CaiI | CAGNNNCTG | 2 cut(s) | 343, 3434 |
| CciI | TCATGA | 3 cut(s) | 2392, 2440, 2479 |
| CfoI | GCGC | 3 cut(s) | 153, 2633, 2847 |
| Cfr13I | GGNCC | 2 cut(s) | 1580, 2053 |
| CseI | GACGC | 3 cut(s) | 809, 2459, 3816 |
| CsiI | ACCWGGT | 1 cut(s) | 820 |
| Csp6I | GTAC | 9 cut(s) | 73, 604, 792, 1179, 1230, 1570, 2768, 3967, 4075 |
| CviQI | GTAC | 9 cut(s) | 73, 604, 792, 1179, 1230, 1570, 2768, 3967, 4075 |
| DraI | TTTAAA | 1 cut(s) | 2913 |
| DraIII | CACNNNGTG | 1 cut(s) | 363 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1959 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1959 |
| EaeI | YGGCCR | 3 cut(s) | 30, 1821, 2269 |
| EagI | CGGCCG | 1 cut(s) | 30 |
| Eam1104I | CTCTTC | 8 cut(s) | 107, 136, 444, 690, 771, 1383, 3168, 3240 |
| EarI | CTCTTC | 8 cut(s) | 107, 136, 444, 690, 771, 1383, 3168, 3240 |
| Ecl136II | GAGCTC | 1 cut(s) | 117 |
| EclXI | CGGCCG | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| Eco24I | GRGCYC | 2 cut(s) | 119, 1284 |
| Eco47I | GGWCC | 2 cut(s) | 1580, 2053 |
| Eco47III | AGCGCT | 1 cut(s) | 2632 |
| Eco52I | CGGCCG | 1 cut(s) | 30 |
| Eco53kI | GAGCTC | 1 cut(s) | 117 |
| Eco57I | CTGAAG | 9 cut(s) | 282, 320, 345, 594, 1407, 1592, 3156, 3609, 3702 |
| Eco88I | CYCGRG | 1 cut(s) | 2594 |
| EcoICRI | GAGCTC | 1 cut(s) | 117 |
| EcoRI | GAATTC | 1 cut(s) | 2215 |
| EcoRII | CCWGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| EcoT14I | CCWWGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| EcoT22I | ATGCAT | 1 cut(s) | 1162 |
| EcoT38I | GRGCYC | 2 cut(s) | 119, 1284 |
| ErhI | CCWWGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| FaqI | GGGAC | 1 cut(s) | 3682 |
| FbaI | TGATCA | 1 cut(s) | 904 |
| FblI | GTMKAC | 3 cut(s) | 1016, 1339, 3790 |
| FriOI | GRGCYC | 2 cut(s) | 119, 1284 |
| FspBI | CTAG | 5 cut(s) | 728, 1730, 2310, 2559, 4055 |
| GlaI | GCGC | 3 cut(s) | 152, 2632, 2846 |
| GsuI | CTGGAG | 5 cut(s) | 110, 158, 365, 1373, 2879 |
| HaeII | RGCGCY | 1 cut(s) | 2634 |
| HaeIII | GGCC | 6 cut(s) | 32, 809, 1711, 1823, 2271, 3394 |
| HgaI | GACGC | 3 cut(s) | 809, 2459, 3816 |
| HhaI | GCGC | 3 cut(s) | 153, 2633, 2847 |
| Hin6I | GCGC | 3 cut(s) | 151, 2631, 2845 |
| HinP1I | GCGC | 3 cut(s) | 151, 2631, 2845 |
| HincII | GTYRAC | 2 cut(s) | 411, 4012 |
| HindII | GTYRAC | 2 cut(s) | 411, 4012 |
| HindIII | AAGCTT | 2 cut(s) | 251, 1496 |
| HphI | GGTGA | 5 cut(s) | 423, 1166, 2315, 2558, 3894 |
| Hpy99I | CGWCG | 3 cut(s) | 17, 1382, 3504 |
| HpyCH4IV | ACGT | 5 cut(s) | 194, 973, 2947, 3502, 3793 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 29, 91, 659, 662, 2133, 2138, 2639, 2930 |
| HpySE526I | ACGT | 5 cut(s) | 194, 973, 2947, 3502, 3793 |
| HspAI | GCGC | 3 cut(s) | 151, 2631, 2845 |
| Ksp22I | TGATCA | 1 cut(s) | 904 |
| LguI | GCTCTTC | 1 cut(s) | 107 |
| LmnI | GCTCC | 7 cut(s) | 91, 122, 878, 1287, 2836, 2860, 3524 |
| MabI | ACCWGGT | 1 cut(s) | 820 |
| MaeI | CTAG | 5 cut(s) | 728, 1730, 2310, 2559, 4055 |
| MaeII | ACGT | 5 cut(s) | 194, 973, 2947, 3502, 3793 |
| MfeI | CAATTG | 4 cut(s) | 900, 1046, 1451, 1530 |
| MflI | RGATCY | 5 cut(s) | 239, 374, 1682, 2404, 2423 |
| MhlI | GDGCHC | 7 cut(s) | 119, 402, 487, 1284, 1319, 1408, 3678 |
| MlsI | TGGCCA | 1 cut(s) | 2271 |
| MluNI | TGGCCA | 1 cut(s) | 2271 |
| MlyI | GAGTC | 8 cut(s) | 151, 757, 1022, 1376, 1669, 1727, 2353, 2987 |
| MmeI | TCCRAC | 4 cut(s) | 649, 1420, 2435, 2970 |
| Mox20I | TGGCCA | 1 cut(s) | 2271 |
| Mph1103I | ATGCAT | 1 cut(s) | 1162 |
| MroXI | GAANNNNTTC | 5 cut(s) | 453, 756, 2107, 2632, 3294 |
| MscI | TGGCCA | 1 cut(s) | 2271 |
| MslI | CAYNNNNRTG | 6 cut(s) | 2445, 2489, 3044, 3513, 3952, 3996 |
| Msp20I | TGGCCA | 1 cut(s) | 2271 |
| MspA1I | CMGCKG | 1 cut(s) | 665 |
| MspR9I | CCNGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| MunI | CAATTG | 4 cut(s) | 900, 1046, 1451, 1530 |
| Mva1269I | GAATGC | 2 cut(s) | 1251, 2710 |
| MvaI | CCWGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 29, 91, 659, 662, 2133, 2138, 2639, 2930 |
| NlaIV | GGNNCC | 3 cut(s) | 1283, 2838, 3520 |
| NmeAIII | GCCGAG | 1 cut(s) | 8 |
| NmuCI | GTSAC | 7 cut(s) | 311, 645, 1539, 2008, 2345, 2577, 3989 |
| NsiI | ATGCAT | 1 cut(s) | 1162 |
| NspI | RCATGY | 5 cut(s) | 531, 857, 1067, 1891, 2989 |
| NspV | TTCGAA | 2 cut(s) | 3415, 3439 |
| PaeI | GCATGC | 2 cut(s) | 857, 1067 |
| PaeR7I | CTCGAG | 1 cut(s) | 2594 |
| PagI | TCATGA | 3 cut(s) | 2392, 2440, 2479 |
| PaqCI | CACCTGC | 1 cut(s) | 1391 |
| PciI | ACATGT | 2 cut(s) | 527, 2985 |
| PciSI | GCTCTTC | 1 cut(s) | 107 |
| PctI | GAATGC | 2 cut(s) | 1251, 2710 |
| PdmI | GAANNNNTTC | 5 cut(s) | 453, 756, 2107, 2632, 3294 |
| Pfl23II | CGTACG | 1 cut(s) | 1178 |
| PflFI | GACNNNGTC | 1 cut(s) | 3731 |
| PfoI | TCCNGGA | 1 cut(s) | 1827 |
| PleI | GAGTC | 8 cut(s) | 151, 757, 1021, 1376, 1668, 1727, 2352, 2986 |
| PpsI | GAGTC | 8 cut(s) | 151, 757, 1021, 1376, 1668, 1727, 2352, 2986 |
| Ppu21I | YACGTR | 1 cut(s) | 3794 |
| PscI | ACATGT | 2 cut(s) | 527, 2985 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1306 |
| PshBI | ATTAAT | 2 cut(s) | 2757, 3042 |
| PsiI | TTATAA | 1 cut(s) | 2070 |
| Psp124BI | GAGCTC | 1 cut(s) | 119 |
| Psp6I | CCWGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| PspGI | CCWGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| PspLI | CGTACG | 1 cut(s) | 1178 |
| PspN4I | GGNNCC | 3 cut(s) | 1283, 2838, 3520 |
| PspPI | GGNCC | 2 cut(s) | 1580, 2053 |
| PstI | CTGCAG | 3 cut(s) | 664, 703, 1402 |
| PstNI | CAGNNNCTG | 2 cut(s) | 343, 3434 |
| PsuI | RGATCY | 5 cut(s) | 239, 374, 1682, 2404, 2423 |
| PsyI | GACNNNGTC | 1 cut(s) | 3731 |
| PvuII | CAGCTG | 1 cut(s) | 665 |
| RsaI | GTAC | 9 cut(s) | 74, 605, 793, 1180, 1231, 1571, 2769, 3968, 4076 |
| RsaNI | GTAC | 9 cut(s) | 73, 604, 792, 1179, 1230, 1570, 2768, 3967, 4075 |
| RseI | CAYNNNNRTG | 6 cut(s) | 2445, 2489, 3044, 3513, 3952, 3996 |
| SacI | GAGCTC | 1 cut(s) | 119 |
| SapI | GCTCTTC | 1 cut(s) | 107 |
| Sau96I | GGNCC | 2 cut(s) | 1580, 2053 |
| SchI | GAGTC | 8 cut(s) | 151, 757, 1022, 1376, 1669, 1727, 2353, 2987 |
| ScrFI | CCNGG | 6 cut(s) | 822, 1286, 1829, 2129, 3401, 3665 |
| SduI | GDGCHC | 7 cut(s) | 119, 402, 487, 1284, 1319, 1408, 3678 |
| SexAI | ACCWGGT | 1 cut(s) | 820 |
| SfcI | CTRYAG | 9 cut(s) | 378, 641, 660, 699, 1398, 2495, 2919, 3453, 3604 |
| Sfr274I | CTCGAG | 1 cut(s) | 2594 |
| SfuI | TTCGAA | 2 cut(s) | 3415, 3439 |
| SinI | GGWCC | 2 cut(s) | 1580, 2053 |
| SlaI | CTCGAG | 1 cut(s) | 2594 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 2445, 2489, 3044, 3513, 3952, 3996 |
| SmlI | CTYRAG | 4 cut(s) | 401, 2594, 2864, 3737 |
| SmoI | CTYRAG | 4 cut(s) | 401, 2594, 2864, 3737 |
| SphI | GCATGC | 2 cut(s) | 857, 1067 |
| SsiI | CCGC | 3 cut(s) | 2056, 2562, 3671 |
| SspI | AATATT | 1 cut(s) | 2195 |
| SspMI | CTAG | 5 cut(s) | 728, 1730, 2310, 2559, 4055 |
| SstI | GAGCTC | 1 cut(s) | 119 |
| StyD4I | CCNGG | 6 cut(s) | 820, 1284, 1827, 2127, 3399, 3663 |
| StyI | CCWWGG | 4 cut(s) | 1895, 2539, 2934, 3201 |
| TaiI | ACGT | 5 cut(s) | 197, 976, 2950, 3505, 3796 |
| TaqI | TCGA | 9 cut(s) | 81, 186, 1240, 1377, 1918, 2429, 2595, 3415, 3439 |
| TatI | WGTACW | 2 cut(s) | 1569, 4074 |
| TseFI | GTSAC | 7 cut(s) | 311, 645, 1539, 2008, 2345, 2577, 3989 |
| Tsp45I | GTSAC | 7 cut(s) | 311, 645, 1539, 2008, 2345, 2577, 3989 |
| TspGWI | ACGGA | 2 cut(s) | 1196, 3032 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3731 |
| VneI | GTGCAC | 2 cut(s) | 1315, 1404 |
| VpaK11BI | GGWCC | 2 cut(s) | 1580, 2053 |
| VspI | ATTAAT | 2 cut(s) | 2757, 3042 |
| XceI | RCATGY | 5 cut(s) | 531, 857, 1067, 1891, 2989 |
| XhoI | CTCGAG | 1 cut(s) | 2594 |
| XmiI | GTMKAC | 3 cut(s) | 1016, 1339, 3790 |
| XmnI | GAANNNNTTC | 5 cut(s) | 453, 756, 2107, 2632, 3294 |
| XspI | CTAG | 5 cut(s) | 728, 1730, 2310, 2559, 4055 |
| Zsp2I | ATGCAT | 1 cut(s) | 1162 |