Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0013880

Physical Location & Seq

Genomic Coordinates Forward (+)

32569757 .. 32573695

Gene Structure 3939 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGAGATGGTGCTGTGGTTTCGGGCATTGCTTTTGGTGGCTTGTATCAGTTGTTTGTTTCCGGCACCAGCCGAATGCCTGGAAAGACATTATAAGTTTAATGTGGTGCTGAAGAAAACCTCACGGCTGTGCTCAAGCAAGCCCATCGTCACCATCAACGGAAAGTACCCCGGACCCACCATATATGCCAGGGAAGATGACACCGTCCTCGTCAAGGTCGTCAACCACGTCAAGTACAACGTTAGCATCCATTGGCATGGGATCAGACAACTGAGAAATGGCTGGGCTGATGGACCTGCGTACATAACTCAGTGCCCAATTCAACCTGGACAACAGTACGTATACAACTTCACCGTCACCGGCCAGAGAGGCACACTGTGGTGGCATGCACACATCCTCTGGCTCAGGGCTACCGTCTATGGCGCCTTGGTCGTCTTACCCAAGCTGGGAGTCCCATATCCCTTTCCTGCACCCAAGAAAGAAGTTGTGGTTATTCTAGGTGAATGGTGGAAATCAGATGTGGAAGCTGTTATCAATGAGGCTCTGAAATCTGGAGCAGCCCCAAATGTTTCTGATGCTCACACAATTAATGGCCACCCAGGGCCTCTCTCACTCTGCTCCTCACAAGGAGGGTACAAATTACCAGTACAACCAGGCCACACATACTTACTAAGAATCATCAATGCTGCACTGAATGATGAGCTCTTCTTCAAGGTTGCCAACCACAAACTAACCGTAGTTGAAGTGGACGCCGTGTACACGAAACCCTTCGAAACCACCACCATTCTCATAGCCCCTGGTCAAACTACAAACGTCCTTCTAACAGCAGACCGTAGCACAGGCAAGTACTTGGTTGCTGCCTCGCCTTTCATGGACAATCCGACGGTAGCTGTAGACAACAAGACTGCAACTGCTACCTTGCACTATAGAGGCAGCCTTGCAAGCACCAACACCATTCTCACCGTCCCTCCTCCTCAAAACGCCACACGCCTAGCCACAAGCTTCACAAAGTCGCTTCGCAGCCTAAATTCGGATACCTATCCAGCTAAGGTGCCATTGAAAATTGATCACTCGTTGATGTTCACCGTAAGCCTTGGGCTTCAGACTTGTCCTAGTTGTGCCAATGGTAATAGAGTGGTGGCGGATCTTAACAATGTCACGTTTGTGATGCCAAAGATTTCACTCCTTCAAGCACATGTCTTCAACATAAGTGGAGTTTTCACTGATGATTTCCCCGGAAACCCTTTGATGCCTTATAACTATACCGGAGCGCAGCAGCCAACGAATATGCAGACCATGAAGGGCACTCGGCTTTACAGACTTGCTTACAACTCTACAGTGCAGCTAGTGCTACAAGACACTGGAATGATTGCCCCTGAAAACCATCCTGTGCATCTTCATGGGTTCAACTTCTTTGAGGTGGGGAGGGGATTGGGAAATTTCAACTCCAAGACTGATCCGAAAATATTCAACCTTATTGACCCTGTCGAGAGGAACACAGTTGGAGTGCCATCAGGTGGATGGACCGCTATCAGATTCAGGGCTGATAATCCAGGGGTATGGTTTATGCATTGTCATCTTGAGGTTCACACAACATGGGGGCTTAAGATGGCATTCGTGGTGGACAATGGCAAAGGCCCCAACGAGTCTGTTCTGCCGCCTCCAAGTGATCTTCCCAAATGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

562

Amino Acids

61.87

Weight (kDa)

9.05

Isoelectric Point (pI)

33.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	38 - 148	2.9e-43	Multicopper oxidase
Cu-oxidase	PF00394	161 - 312	3.4e-46	Multicopper oxidase
Cu-oxidase_2	PF07731	417 - 544	3.8e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58910 AT5G58910 AT5G58910
fragaria_vesca	FvH4_3g38140 FvH4_3g38140
malus_domestica	MD03G1076400.v1.1 MD11G1080900.v1.1
prunus_persica	Prupe.6G061300_v2.0.a1
pyrus_communis	pycom03g06060 pycom11g06900
rosa_chinensis	RchiOBHm_Chr5g0068571
rosa_laevigata	RLG00000035980
rosa_multiflora	Rmu_co8498395.1_g000001
rosa_roxburghii	Rroxscaffold_1G00012290
rosa_rugosa	Rorug05G0391500
rosa_samantha	Rh5DG480800
rosa_wichuraiana	Rw5G041940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	93, 1257
Acc36I	ACCTGC	1 cut(s)	304
AccB1I	GGYRCC	3 cut(s)	64, 422, 1051
AccB7I	CCANNNNNTGG	1 cut(s)	1517
AccI	GTMKAC	2 cut(s)	342, 894
AciI	CCGC	3 cut(s)	1142, 1527, 1658
AclI	AACGTT	1 cut(s)	240
AclWI	GGATC	3 cut(s)	269, 1152, 1451
AcoI	YGGCCR	2 cut(s)	361, 592
AcsI	RAATTY	2 cut(s)	1027, 1438
AcuI	CTGAAG	2 cut(s)	131, 1085
AcyI	GRCGYC	2 cut(s)	423, 750
AdeI	CACNNNGTG	1 cut(s)	378
AfaI	GTAC	8 cut(s)	167, 236, 302, 338, 635, 648, 758, 848
AfiI	CCNNNNNNNGG	4 cut(s)	214, 446, 1030, 1517
AflII	CTTAAG	1 cut(s)	1604
AflIII	ACRYGT	1 cut(s)	1195
AgsI	TTSAA	9 cut(s)	323, 712, 743, 1060, 1190, 1204, 1408, 1444, 1471
AjiI	CACGTC	1 cut(s)	229
AjnI	CCWGG	7 cut(s)	78, 188, 325, 598, 652, 796, 1552
AleI	CACNNNNGTG	3 cut(s)	127, 379, 1163
AluBI	AGCT	7 cut(s)	445, 527, 703, 890, 1002, 1046, 1345
AluI	AGCT	7 cut(s)	445, 527, 703, 890, 1002, 1046, 1345
Alw21I	GWGCWC	2 cut(s)	134, 705
AlwI	GGATC	3 cut(s)	269, 1152, 1451
AoxI	GGCC	5 cut(s)	361, 592, 602, 655, 1636
ApeKI	GCWGC	8 cut(s)	557, 686, 857, 933, 1020, 1273, 1276, 1342
ApoI	RAATTY	2 cut(s)	1027, 1438
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	2 cut(s)	767, 1466
AspLEI	GCGC	2 cut(s)	425, 1273
AspS9I	GGNCC	5 cut(s)	173, 293, 602, 1524, 1637
AsuC2I	CCSGG	2 cut(s)	171, 1236
AsuHPI	GGTGA	6 cut(s)	142, 343, 349, 512, 952, 1075
AsuII	TTCGAA	1 cut(s)	771
AvaII	GGWCC	3 cut(s)	173, 293, 1524
BaeGI	GKGCMC	2 cut(s)	317, 1307
BalI	TGGCCA	1 cut(s)	594
BanI	GGYRCC	3 cut(s)	64, 422, 1051
BanII	GRGCYC	1 cut(s)	705
BbsI	GAAGAC	1 cut(s)	1192
Bbv12I	GWGCWC	2 cut(s)	134, 705
BbvI	GCAGC	8 cut(s)	569, 673, 844, 945, 1032, 1285, 1288, 1354
BccI	CCATC	7 cut(s)	152, 161, 284, 1392, 1515, 1519, 1603
BceAI	ACGGC	2 cut(s)	140, 737
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciT130I	CCWGG	7 cut(s)	80, 190, 327, 600, 654, 798, 1554
BciVI	GTATCC	1 cut(s)	1027
BclI	TGATCA	1 cut(s)	1066
BcnI	CCSGG	2 cut(s)	171, 1236
BfaI	CTAG	4 cut(s)	497, 992, 1113, 1346
BfmI	CTRYAG	3 cut(s)	891, 925, 1335
BfoI	RGCGCY	1 cut(s)	426
BfrI	CTTAAG	1 cut(s)	1604
BfuAI	ACCTGC	1 cut(s)	304
BfuI	GTATCC	1 cut(s)	1027
BglI	GCCNNNNNGGC	1 cut(s)	369
BisI	GCNGC	9 cut(s)	558, 687, 858, 934, 1021, 1274, 1277, 1343, 1658
BlsI	GCNGC	9 cut(s)	559, 688, 859, 935, 1022, 1275, 1278, 1344, 1659
BmcAI	AGTACT	1 cut(s)	848
Bme1390I	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
Bme18I	GGWCC	3 cut(s)	173, 293, 1524
BmgBI	CACGTC	1 cut(s)	229
BmgT120I	GGNCC	5 cut(s)	173, 293, 602, 1524, 1637
BmiI	GGNNCC	5 cut(s)	66, 175, 424, 1053, 1639
BmrFI	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
BmsI	GCATC	5 cut(s)	255, 565, 1158, 1239, 1402
BpiI	GAAGAC	1 cut(s)	1192
BpmI	CTGGAG	1 cut(s)	573
Bpu10I	CCTNAGC	2 cut(s)	404, 1047
Bpu14I	TTCGAA	1 cut(s)	771
BpuEI	CTTGAG	2 cut(s)	118, 1601
BpuMI	CCSGG	2 cut(s)	171, 1236
BsaAI	YACGTR	1 cut(s)	340
BsaBI	GATNNNNATC	1 cut(s)	1038
BsaHI	GRCGYC	2 cut(s)	423, 750
BsaJI	CCNNGG	9 cut(s)	169, 189, 426, 598, 599, 796, 1093, 1234, 1553
BsaWI	WCCGGW	1 cut(s)	1265
BsaXI	ACNNNNNCTCC	2 cut(s)	952, 982
Bsc4I	CCNNNNNNNGG	4 cut(s)	214, 446, 1030, 1517
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	2 cut(s)	644, 1366
Bse3DI	GCAATG	1 cut(s)	26
Bse8I	GATNNNNATC	1 cut(s)	1038
BseBI	CCWGG	7 cut(s)	80, 190, 327, 600, 654, 798, 1554
BseDI	CCNNGG	9 cut(s)	169, 189, 426, 598, 599, 796, 1093, 1234, 1553
BseGI	GGATG	4 cut(s)	246, 393, 1384, 1526
BseJI	GATNNNNATC	1 cut(s)	1038
BseLI	CCNNNNNNNGG	4 cut(s)	214, 446, 1030, 1517
BseMI	GCAATG	1 cut(s)	26
BseMII	CTCAG	3 cut(s)	263, 323, 418
BseNI	ACTGG	2 cut(s)	644, 1366
BseRI	GAGGAG	3 cut(s)	610, 960, 963
BseSI	GKGCMC	2 cut(s)	317, 1307
BseXI	GCAGC	8 cut(s)	569, 673, 844, 945, 1032, 1285, 1288, 1354
BseYI	CCCAGC	2 cut(s)	282, 445
BsgI	GTGCAG	3 cut(s)	453, 672, 1361
BshFI	GGCC	5 cut(s)	363, 594, 604, 657, 1638
BshNI	GGYRCC	3 cut(s)	64, 422, 1051
BsiHKAI	GWGCWC	2 cut(s)	134, 705
BsiSI	CCGG	5 cut(s)	62, 171, 360, 1236, 1266
BslFI	GGGAC	2 cut(s)	437, 950
BslI	CCNNNNNNNGG	4 cut(s)	214, 446, 1030, 1517
BsmFI	GGGAC	2 cut(s)	437, 950
BsmI	GAATGC	2 cut(s)	80, 1613
BsnI	GGCC	5 cut(s)	363, 594, 604, 657, 1638
Bsp119I	TTCGAA	1 cut(s)	771
Bsp1286I	GDGCHC	4 cut(s)	134, 317, 705, 1307
Bsp1407I	TGTACA	1 cut(s)	756
Bsp143I	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
BspACI	CCGC	3 cut(s)	1142, 1527, 1658
BspANI	GGCC	5 cut(s)	363, 594, 604, 657, 1638
BspCNI	CTCAG	3 cut(s)	264, 322, 417
BspLI	GGNNCC	5 cut(s)	66, 175, 424, 1053, 1639
BspMI	ACCTGC	1 cut(s)	304
BspPI	GGATC	3 cut(s)	269, 1152, 1451
BspQI	GCTCTTC	1 cut(s)	710
BspT104I	TTCGAA	1 cut(s)	771
BspT107I	GGYRCC	3 cut(s)	64, 422, 1051
BspTI	CTTAAG	1 cut(s)	1604
BsrDI	GCAATG	1 cut(s)	26
BsrFI	RCCGGY	1 cut(s)	359
BsrGI	TGTACA	1 cut(s)	756
BsrI	ACTGG	2 cut(s)	644, 1366
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	9 cut(s)	169, 189, 426, 598, 599, 796, 1093, 1234, 1553
BssMI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
BssNAI	GTATAC	1 cut(s)	343
BssNI	GRCGYC	2 cut(s)	423, 750
BssT1I	CCWWGG	2 cut(s)	426, 1093
Bst1107I	GTATAC	1 cut(s)	343
Bst2UI	CCWGG	7 cut(s)	80, 190, 327, 600, 654, 798, 1554
Bst6I	CTCTTC	1 cut(s)	710
BstACI	GRCGYC	2 cut(s)	423, 750
BstAFI	CTTAAG	1 cut(s)	1604
BstAPI	GCANNNNNTGC	1 cut(s)	1348
BstAUI	TGTACA	1 cut(s)	756
BstBAI	YACGTR	1 cut(s)	340
BstBI	TTCGAA	1 cut(s)	771
BstC8I	GCNNGC	3 cut(s)	140, 387, 943
BstDEI	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
BstENI	CCTNNNNNAGG	1 cut(s)	212
BstF5I	GGATG	4 cut(s)	246, 393, 1384, 1526
BstH2I	RGCGCY	1 cut(s)	426
BstHHI	GCGC	2 cut(s)	425, 1273
BstKTI	GATC	5 cut(s)	264, 1069, 1147, 1459, 1672
BstMBI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
BstMWI	GCNNNNNNNGC	3 cut(s)	369, 942, 1348
BstNI	CCWGG	7 cut(s)	80, 190, 327, 600, 654, 798, 1554
BstNSI	RCATGY	2 cut(s)	389, 1199
BstSCI	CCNGG	9 cut(s)	78, 169, 188, 325, 598, 652, 796, 1234, 1552
BstSFI	CTRYAG	3 cut(s)	891, 925, 1335
BstSLI	GKGCMC	2 cut(s)	317, 1307
BstSNI	TACGTA	1 cut(s)	340
BstV1I	GCAGC	8 cut(s)	569, 673, 844, 945, 1032, 1285, 1288, 1354
BstV2I	GAAGAC	1 cut(s)	1192
BstX2I	RGATCY	1 cut(s)	1144
BstXI	CCANNNNNNTGG	2 cut(s)	257, 1560
BstYI	RGATCY	1 cut(s)	1144
BstZ17I	GTATAC	1 cut(s)	343
BsuI	GTATCC	1 cut(s)	1027
BsuRI	GGCC	5 cut(s)	363, 594, 604, 657, 1638
BtrI	CACGTC	1 cut(s)	229
BtsCI	GGATG	4 cut(s)	246, 393, 1384, 1526
BtsIMutI	CAGTG	6 cut(s)	317, 374, 689, 1221, 1344, 1359
BveI	ACCTGC	1 cut(s)	304
Cac8I	GCNNGC	3 cut(s)	140, 387, 943
CfoI	GCGC	2 cut(s)	425, 1273
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	5 cut(s)	173, 293, 602, 1524, 1637
CseI	GACGC	1 cut(s)	758
Csp6I	GTAC	8 cut(s)	166, 235, 301, 337, 634, 647, 757, 847
CspCI	CAANNNNNGTGG	2 cut(s)	1192, 1227
CviAII	CATG	7 cut(s)	257, 386, 871, 1196, 1297, 1400, 1596
CviQI	GTAC	8 cut(s)	166, 235, 301, 337, 634, 647, 757, 847
DdeI	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
DinI	GGCGCC	1 cut(s)	424
DpnI	GATC	5 cut(s)	263, 1068, 1146, 1458, 1671
DpnII	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
DraIII	CACNNNGTG	1 cut(s)	378
EaeI	YGGCCR	2 cut(s)	361, 592
Eam1104I	CTCTTC	1 cut(s)	710
EarI	CTCTTC	1 cut(s)	710
EciI	GGCGGA	1 cut(s)	1157
Ecl136II	GAGCTC	1 cut(s)	703
Eco105I	TACGTA	1 cut(s)	340
Eco130I	CCWWGG	2 cut(s)	426, 1093
Eco24I	GRGCYC	1 cut(s)	705
Eco47I	GGWCC	3 cut(s)	173, 293, 1524
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	2 cut(s)	131, 1085
EcoICRI	GAGCTC	1 cut(s)	703
EcoNI	CCTNNNNNAGG	1 cut(s)	212
EcoO109I	RGGNCCY	2 cut(s)	602, 1637
EcoRII	CCWGG	7 cut(s)	78, 188, 325, 598, 652, 796, 1552
EcoT14I	CCWWGG	2 cut(s)	426, 1093
EcoT22I	ATGCAT	1 cut(s)	1572
EcoT38I	GRGCYC	1 cut(s)	705
EgeI	GGCGCC	1 cut(s)	424
EheI	GGCGCC	1 cut(s)	424
ErhI	CCWWGG	2 cut(s)	426, 1093
FaeI	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1599
FaqI	GGGAC	2 cut(s)	437, 950
FatI	CATG	7 cut(s)	256, 385, 870, 1195, 1296, 1399, 1595
FbaI	TGATCA	1 cut(s)	1066
FblI	GTMKAC	2 cut(s)	342, 894
Fnu4HI	GCNGC	9 cut(s)	558, 687, 858, 934, 1021, 1274, 1277, 1343, 1658
FokI	GGATG	4 cut(s)	233, 380, 1371, 1533
FriOI	GRGCYC	1 cut(s)	705
Fsp4HI	GCNGC	9 cut(s)	558, 687, 858, 934, 1021, 1274, 1277, 1343, 1658
FspBI	CTAG	4 cut(s)	497, 992, 1113, 1346
GlaI	GCGC	2 cut(s)	424, 1272
GluI	GCNGC	9 cut(s)	558, 687, 858, 934, 1021, 1274, 1277, 1343, 1658
GsaI	CCCAGC	2 cut(s)	286, 449
GsuI	CTGGAG	1 cut(s)	573
HaeII	RGCGCY	1 cut(s)	426
HaeIII	GGCC	5 cut(s)	363, 594, 604, 657, 1638
HapII	CCGG	5 cut(s)	62, 171, 360, 1236, 1266
HgaI	GACGC	1 cut(s)	758
HhaI	GCGC	2 cut(s)	425, 1273
Hin1I	GRCGYC	2 cut(s)	423, 750
Hin1II	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1599
Hin6I	GCGC	2 cut(s)	423, 1271
HinP1I	GCGC	2 cut(s)	423, 1271
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HindIII	AAGCTT	1 cut(s)	1000
HinfI	GANTC	4 cut(s)	450, 675, 1536, 1646
HpaII	CCGG	5 cut(s)	62, 171, 360, 1236, 1266
HphI	GGTGA	6 cut(s)	142, 343, 349, 512, 952, 1075
Hpy166II	GTNNAC	9 cut(s)	223, 343, 748, 757, 759, 895, 1083, 1588, 1624
Hpy188I	TCNGA	9 cut(s)	266, 517, 546, 574, 882, 1033, 1104, 1461, 1535
Hpy188III	TCNNGA	3 cut(s)	552, 1489, 1580
Hpy8I	GTNNAC	9 cut(s)	223, 343, 748, 757, 759, 895, 1083, 1588, 1624
Hpy99I	CGWCG	1 cut(s)	886
HpyAV	CCTTC	4 cut(s)	778, 827, 1196, 1294
HpyCH4IV	ACGT	5 cut(s)	228, 240, 339, 813, 1160
HpyF10VI	GCNNNNNNNGC	3 cut(s)	369, 942, 1348
HpyF3I	CTNAG	5 cut(s)	272, 309, 404, 671, 1047
HpySE526I	ACGT	5 cut(s)	228, 240, 339, 813, 1160
Hsp92I	GRCGYC	2 cut(s)	423, 750
Hsp92II	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1599
HspAI	GCGC	2 cut(s)	423, 1271
KasI	GGCGCC	1 cut(s)	422
Ksp22I	TGATCA	1 cut(s)	1066
Kzo9I	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
LguI	GCTCTTC	1 cut(s)	710
LmnI	GCTCC	3 cut(s)	554, 623, 1268
Lsp1109I	GCAGC	8 cut(s)	569, 673, 844, 945, 1032, 1285, 1288, 1354
LweI	GCATC	5 cut(s)	255, 565, 1158, 1239, 1402
MaeI	CTAG	4 cut(s)	497, 992, 1113, 1346
MaeII	ACGT	5 cut(s)	228, 240, 339, 813, 1160
MaeIII	GTNAC	3 cut(s)	148, 355, 1156
MalI	GATC	5 cut(s)	263, 1068, 1146, 1458, 1671
MboI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
MboII	GAAGA	7 cut(s)	124, 206, 697, 700, 1192, 1388, 1664
MflI	RGATCY	1 cut(s)	1144
MhlI	GDGCHC	4 cut(s)	134, 317, 705, 1307
MlsI	TGGCCA	1 cut(s)	594
MluCI	AATT	6 cut(s)	318, 585, 638, 1027, 1062, 1438
MluNI	TGGCCA	1 cut(s)	594
Mly113I	GGCGCC	1 cut(s)	423
MlyI	GAGTC	2 cut(s)	459, 1655
MmeI	TCCRAC	2 cut(s)	905, 1483
Mox20I	TGGCCA	1 cut(s)	594
Mph1103I	ATGCAT	1 cut(s)	1572
MroXI	GAANNNNTTC	2 cut(s)	767, 1466
MscI	TGGCCA	1 cut(s)	594
MseI	TTAA	4 cut(s)	99, 588, 1149, 1605
MslI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
Msp20I	TGGCCA	1 cut(s)	594
MspCI	CTTAAG	1 cut(s)	1604
MspI	CCGG	5 cut(s)	62, 171, 360, 1236, 1266
MspR9I	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
Mva1269I	GAATGC	2 cut(s)	80, 1613
MvaI	CCWGG	7 cut(s)	80, 190, 327, 600, 654, 798, 1554
MwoI	GCNNNNNNNGC	3 cut(s)	369, 942, 1348
NarI	GGCGCC	1 cut(s)	423
NciI	CCSGG	2 cut(s)	171, 1236
NdeII	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
NlaIII	CATG	7 cut(s)	260, 389, 874, 1199, 1300, 1403, 1599
NlaIV	GGNNCC	5 cut(s)	66, 175, 424, 1053, 1639
NmeAIII	GCCGAG	1 cut(s)	1288
NmuCI	GTSAC	3 cut(s)	148, 355, 1156
NsiI	ATGCAT	1 cut(s)	1572
NspI	RCATGY	2 cut(s)	389, 1199
NspV	TTCGAA	1 cut(s)	771
OliI	CACNNNNGTG	3 cut(s)	127, 379, 1163
PaeI	GCATGC	1 cut(s)	389
PasI	CCCWGGG	1 cut(s)	599
PciI	ACATGT	1 cut(s)	1195
PciSI	GCTCTTC	1 cut(s)	710
PcsI	WCGNNNNNNNCGW	2 cut(s)	216, 225
PctI	GAATGC	2 cut(s)	80, 1613
PdmI	GAANNNNTTC	2 cut(s)	767, 1466
PfeI	GAWTC	2 cut(s)	675, 1536
PflFI	GACNNNGTC	2 cut(s)	203, 1484
PflMI	CCANNNNNTGG	1 cut(s)	1517
PkrI	GCNGC	9 cut(s)	559, 688, 859, 935, 1022, 1275, 1278, 1344, 1659
PleI	GAGTC	2 cut(s)	458, 1654
PluTI	GGCGCC	1 cut(s)	426
PpsI	GAGTC	2 cut(s)	458, 1654
Ppu21I	YACGTR	1 cut(s)	340
PscI	ACATGT	1 cut(s)	1195
PshBI	ATTAAT	1 cut(s)	588
PsiI	TTATAA	2 cut(s)	93, 1257
Psp124BI	GAGCTC	1 cut(s)	705
Psp1406I	AACGTT	1 cut(s)	240
Psp6I	CCWGG	7 cut(s)	78, 188, 325, 598, 652, 796, 1552
PspFI	CCCAGC	2 cut(s)	282, 445
PspGI	CCWGG	7 cut(s)	78, 188, 325, 598, 652, 796, 1552
PspN4I	GGNNCC	5 cut(s)	66, 175, 424, 1053, 1639
PspPI	GGNCC	5 cut(s)	173, 293, 602, 1524, 1637
PsuI	RGATCY	1 cut(s)	1144
PsyI	GACNNNGTC	2 cut(s)	203, 1484
RsaI	GTAC	8 cut(s)	167, 236, 302, 338, 635, 648, 758, 848
RsaNI	GTAC	8 cut(s)	166, 235, 301, 337, 634, 647, 757, 847
RseI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
SacI	GAGCTC	1 cut(s)	705
SapI	GCTCTTC	1 cut(s)	710
SaqAI	TTAA	4 cut(s)	99, 588, 1149, 1605
SatI	GCNGC	9 cut(s)	558, 687, 858, 934, 1021, 1274, 1277, 1343, 1658
Sau3AI	GATC	5 cut(s)	261, 1066, 1144, 1456, 1669
Sau96I	GGNCC	5 cut(s)	173, 293, 602, 1524, 1637
ScaI	AGTACT	1 cut(s)	848
SchI	GAGTC	2 cut(s)	459, 1655
ScrFI	CCNGG	9 cut(s)	80, 171, 190, 327, 600, 654, 798, 1236, 1554
SduI	GDGCHC	4 cut(s)	134, 317, 705, 1307
SfaNI	GCATC	5 cut(s)	255, 565, 1158, 1239, 1402
SfcI	CTRYAG	3 cut(s)	891, 925, 1335
SfoI	GGCGCC	1 cut(s)	424
SfuI	TTCGAA	1 cut(s)	771
SinI	GGWCC	3 cut(s)	173, 293, 1524
SmiMI	CAYNNNNRTG	6 cut(s)	127, 255, 379, 1163, 1364, 1398
SmlI	CTYRAG	3 cut(s)	133, 1580, 1604
SmoI	CTYRAG	3 cut(s)	133, 1580, 1604
SnaBI	TACGTA	1 cut(s)	340
SphI	GCATGC	1 cut(s)	389
Sse9I	AATT	6 cut(s)	318, 585, 638, 1027, 1062, 1438
SsiI	CCGC	3 cut(s)	1142, 1527, 1658
SspDI	GGCGCC	1 cut(s)	422
SspI	AATATT	1 cut(s)	1467
SspMI	CTAG	4 cut(s)	497, 992, 1113, 1346
SstI	GAGCTC	1 cut(s)	705
StyD4I	CCNGG	9 cut(s)	78, 169, 188, 325, 598, 652, 796, 1234, 1552
StyI	CCWWGG	2 cut(s)	426, 1093
TaiI	ACGT	5 cut(s)	231, 243, 342, 816, 1163
TaqI	TCGA	2 cut(s)	771, 1488
TasI	AATT	6 cut(s)	318, 585, 638, 1027, 1062, 1438
TatI	WGTACW	4 cut(s)	234, 646, 756, 846
TauI	GCSGC	1 cut(s)	1660
TfiI	GAWTC	2 cut(s)	675, 1536
Tru1I	TTAA	4 cut(s)	99, 588, 1149, 1605
Tru9I	TTAA	4 cut(s)	99, 588, 1149, 1605
TscAI	CASTG	6 cut(s)	317, 381, 696, 1228, 1344, 1366
TseFI	GTSAC	3 cut(s)	148, 355, 1156
TseI	GCWGC	8 cut(s)	557, 686, 857, 933, 1020, 1273, 1276, 1342
Tsp45I	GTSAC	3 cut(s)	148, 355, 1156
TspDTI	ATGAA	3 cut(s)	859, 1313, 1388
TspGWI	ACGGA	1 cut(s)	174
TspRI	CASTG	6 cut(s)	317, 381, 696, 1228, 1344, 1366
Tth111I	GACNNNGTC	2 cut(s)	203, 1484
Van91I	CCANNNNNTGG	1 cut(s)	1517
Vha464I	CTTAAG	1 cut(s)	1604
VpaK11BI	GGWCC	3 cut(s)	173, 293, 1524
VspI	ATTAAT	1 cut(s)	588
XagI	CCTNNNNNAGG	1 cut(s)	212
XapI	RAATTY	2 cut(s)	1027, 1438
XceI	RCATGY	2 cut(s)	389, 1199
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1518
XmiI	GTMKAC	2 cut(s)	342, 894
XmnI	GAANNNNTTC	2 cut(s)	767, 1466
XspI	CTAG	4 cut(s)	497, 992, 1113, 1346
ZrmI	AGTACT	1 cut(s)	848
Zsp2I	ATGCAT	1 cut(s)	1572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.