Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0013880

Physical Location & Seq

Genomic Coordinates Reverse (-)

6221469 .. 6226661

Gene Structure 5193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1076400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGCAATGGTGCTGTGGATTCGAGTCGTACTTCTGGTGGCGTGTTTGTGTTTTCCGGTATCCGTGGAATGCATGGTTCGACATTACAAGTTTAATGTGGTGCAGAAGAACATCTCAAGATTGTGTTCAAGCAAGCCCATTGTCACTGTCAATGGAAGGTATCCTGGTCCCACCATTTATGCTAGGGAAGATGATACAGTGCTAATCAAGGTGGTCAACCATGTCAAATACAATGTTAGCATCCACTGGCACGGGATTCGACAACTCCGGACGGGCTGGGCTGATGGGCCGGCATACATAACCCAGTGTCCAATTCAACCGGGCCAGCAATATGTATACAACTTCACCATCACTGGGCAAAGGGGCACACTTTGGTGGCATGCACACATTCTTTGGCTCAGGGCCACTGTCCATGGTGCCTTGGTCATCTTACCCAAGCATGGTGTCCCATACCCATTTCCTGCTCCCCGAAAGGAATTGGTTGTAATTTTAGGTGAATGGTGGAAATCAGATACGGAAGCTGTCATCAATGAGGCTTTAAAATCTGGTTTAGCCCCAAATATCTCTGACGCTCACACAATCAATGGTCATCCAGGGCCACTCTCAACTTGTCAATCACAAGGAGGGTTAAAATTACCAGTAAGACCTGGGAAGACATACATGCTAAGAATCATCAATGCTGCACTGAATGAAGAGCTCTTCTTTAAGATTGCTAACCACAAATTAACGGTAGTTGAAGTCGATGCTGTGTACACAAAACCCTTCAAAACTGACACCATTCTCATAGCCCCGGGGCAGACAACAAATGTTCTTGTAACAACAAACCTTGGCTCAGGCAAGTACTTGGTTGCAGCCTCGCCGTTCATGGACAATCCGACCATCGTTGTGGACAACAAGACCGCCACCGCTACATTGCACTATATAGGCACCCTTCAAAGCACGAAGACCATTCTCACAGCCCCACCTCCTCAAAATGCCACAACTGTGGCAACAAACTTTACAAACTCCCTCAGAAGTCTCAACTCAATCCGATTTCCAGCTAGGGTTCCGTTGAAAATTGACCACTCCCTTTTGTTCACTGTTGGTTTAGGGCTTCACACTTGCGCATCATGTACCAATGGTAACAGGGTGGTGGCAGATATCAACAATGTCACATTTGTGATGCCTGAAATTGCACTTCTTCAAGCACATTTCTTCAACATAAGTGGAGTTTTTACCGATGATTTTCCAGGAAACCCTCTGAATCCTTATAATTACACCGGGACACAGCCGACGAATTTGCAGACCAGGAAGGGGACTAGGCTTTATAGACTTGCTTACAACTCCACAGTGCAACTTGTGTTGCAAGACACTGGGATGATTGCCCCTGAAACCCATCCGGTGCATCTTCATGGGTTTAATTTCTTTGAGGTTGGGAGGGGACTGGGAAATTTCAACCCAATGAAGGATCCGAAAAAATTCAACCTCGTTGATCCTGTTGAGAGGAACACAATTGGAGTGCCATCAAATGGATGGACTGCTATCAGATTCAGGGCTGATAATCCAGGAGTTTGGTTTATGCATTGCCATCTTGAAGTGCACACAACATGGGGGCTGAAGATGGCATTTGTGGTGGACAATGGCAAAGGCCCAAATGAATCTGTTCTTCCACCTCCAAGTGACCTTCCCAAGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009832 GO:0009834 GO:0009987 GO:0016491 GO:0016722 GO:0019438 GO:0019748 GO:0042546 GO:0044085 GO:0044237 GO:0044249 GO:0044550 GO:0055114 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

559

Amino Acids

61.81

Weight (kDa)

9.32

Isoelectric Point (pI)

35.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	5e-43	Multicopper oxidase
Cu-oxidase	PF00394	159 - 309	3.8e-45	Multicopper oxidase
Cu-oxidase_2	PF07731	417 - 541	1.1e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58910 AT5G58910 AT5G58910
fragaria_vesca	FvH4_3g38140 FvH4_3g38140
malus_domestica	MD03G1076400.v1.1 MD11G1080900.v1.1
prunus_persica	Prupe.6G061300_v2.0.a1
pyrus_communis	pycom03g06060 pycom11g06900
rosa_chinensis	RchiOBHm_Chr5g0068571
rosa_laevigata	RLG00000035980
rosa_multiflora	Rmu_co8498395.1_g000001
rosa_roxburghii	Rroxscaffold_1G00012290
rosa_rugosa	Rorug05G0391500
rosa_samantha	Rh5DG480800
rosa_wichuraiana	Rw5G041940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1251
Acc16I	TGCGCA	1 cut(s)	1105
AccB1I	GGYRCC	2 cut(s)	416, 926
AccB7I	CCANNNNNTGG	1 cut(s)	1508
AccI	GTMKAC	1 cut(s)	336
AccIII	TCCGGA	1 cut(s)	267
AciI	CCGC	2 cut(s)	900, 906
AclWI	GGATC	3 cut(s)	1442, 1455, 1466
AcsI	RAATTY	3 cut(s)	1276, 1429, 1457
AcuI	CTGAAG	1 cut(s)	1616
AfaI	GTAC	4 cut(s)	30, 752, 842, 1114
AfiI	CCNNNNNNNGG	5 cut(s)	354, 440, 1293, 1444, 1508
AjnI	CCWGG	6 cut(s)	163, 592, 646, 1228, 1286, 1543
AleI	CACNNNNGTG	3 cut(s)	373, 983, 1157
AluBI	AGCT	3 cut(s)	521, 697, 1040
AluI	AGCT	3 cut(s)	521, 697, 1040
Alw21I	GWGCWC	2 cut(s)	699, 1581
Alw26I	GTCTC	1 cut(s)	1022
Alw44I	GTGCAC	1 cut(s)	1577
AlwI	GGATC	3 cut(s)	1442, 1455, 1466
Ama87I	CYCGRG	1 cut(s)	790
Aor13HI	TCCGGA	1 cut(s)	267
AoxI	GGCC	5 cut(s)	287, 322, 402, 596, 1627
ApaLI	GTGCAC	1 cut(s)	1577
ApeKI	GCWGC	2 cut(s)	680, 851
ApoI	RAATTY	3 cut(s)	1276, 1429, 1457
Asp700I	GAANNNNTTC	2 cut(s)	1457, 1641
AspLEI	GCGC	1 cut(s)	1106
AspS9I	GGNCC	6 cut(s)	167, 287, 322, 402, 596, 1628
AsuC2I	CCSGG	4 cut(s)	321, 791, 792, 1261
AsuHPI	GGTGA	2 cut(s)	337, 506
AvaI	CYCGRG	1 cut(s)	790
AvaII	GGWCC	1 cut(s)	167
BaeGI	GKGCMC	2 cut(s)	368, 1581
BamHI	GGATCC	1 cut(s)	1447
BanI	GGYRCC	2 cut(s)	416, 926
BanII	GRGCYC	1 cut(s)	699
BbsI	GAAGAC	2 cut(s)	659, 950
Bbv12I	GWGCWC	2 cut(s)	699, 1581
BbvI	GCAGC	2 cut(s)	667, 863
BccI	CCATC	8 cut(s)	278, 356, 887, 1383, 1506, 1510, 1575, 1594
BceAI	ACGGC	1 cut(s)	844
BcgI	CGANNNNNNTGC	4 cut(s)	239, 273, 1261, 1295
BciT130I	CCWGG	6 cut(s)	165, 594, 648, 1230, 1288, 1545
BciVI	GTATCC	2 cut(s)	70, 171
BcnI	CCSGG	4 cut(s)	321, 791, 792, 1261
BcoDI	GTCTC	1 cut(s)	1022
BfaI	CTAG	4 cut(s)	183, 1041, 1299, 1675
BfuI	GTATCC	2 cut(s)	70, 171
BisI	GCNGC	2 cut(s)	681, 852
BlsI	GCNGC	2 cut(s)	682, 853
BmcAI	AGTACT	1 cut(s)	842
Bme18I	GGWCC	1 cut(s)	167
BmeT110I	CYCGRG	1 cut(s)	790
BmgT120I	GGNCC	6 cut(s)	167, 287, 322, 402, 596, 1628
BmiI	GGNNCC	5 cut(s)	169, 418, 928, 1047, 1449
BmrI	ACTGGG	4 cut(s)	298, 363, 1362, 1433
BmsI	GCATC	5 cut(s)	249, 733, 1115, 1152, 1393
BmuI	ACTGGG	4 cut(s)	298, 363, 1362, 1433
BpiI	GAAGAC	2 cut(s)	659, 950
Bpu10I	CCTNAGC	2 cut(s)	398, 832
BpuEI	CTTGAG	1 cut(s)	100
BpuMI	CCSGG	4 cut(s)	321, 791, 792, 1261
BsaJI	CCNNGG	9 cut(s)	63, 412, 420, 593, 647, 789, 790, 791, 826
BsaWI	WCCGGW	3 cut(s)	55, 267, 1378
Bsc4I	CCNNNNNNNGG	5 cut(s)	354, 440, 1293, 1444, 1508
Bse118I	RCCGGY	1 cut(s)	289
Bse1I	ACTGG	6 cut(s)	251, 304, 358, 638, 1357, 1428
Bse3DI	GCAATG	3 cut(s)	12, 911, 1561
BseAI	TCCGGA	1 cut(s)	267
BseBI	CCWGG	6 cut(s)	165, 594, 648, 1230, 1288, 1545
BseDI	CCNNGG	9 cut(s)	63, 412, 420, 593, 647, 789, 790, 791, 826
BseGI	GGATG	5 cut(s)	240, 589, 1362, 1375, 1517
BseLI	CCNNNNNNNGG	5 cut(s)	354, 440, 1293, 1444, 1508
BseMI	GCAATG	3 cut(s)	12, 911, 1561
BseMII	CTCAG	3 cut(s)	412, 846, 1024
BseNI	ACTGG	6 cut(s)	251, 304, 358, 638, 1357, 1428
BseRI	GAGGAG	1 cut(s)	957
BseSI	GKGCMC	2 cut(s)	368, 1581
BseXI	GCAGC	2 cut(s)	667, 863
BseYI	CCCAGC	1 cut(s)	276
BsgI	GTGCAG	2 cut(s)	122, 666
BshFI	GGCC	5 cut(s)	289, 324, 404, 598, 1629
BshNI	GGYRCC	2 cut(s)	416, 926
BsiHKAI	GWGCWC	2 cut(s)	699, 1581
BsiHKCI	CYCGRG	1 cut(s)	790
BsiSI	CCGG	7 cut(s)	56, 268, 290, 320, 791, 1260, 1379
BslFI	GGGAC	5 cut(s)	153, 431, 1276, 1309, 1434
BslI	CCNNNNNNNGG	5 cut(s)	354, 440, 1293, 1444, 1508
BsmAI	GTCTC	1 cut(s)	1022
BsmFI	GGGAC	5 cut(s)	153, 431, 1276, 1309, 1434
BsmI	GAATGC	1 cut(s)	74
BsnI	GGCC	5 cut(s)	289, 324, 404, 598, 1629
BsoBI	CYCGRG	1 cut(s)	790
Bsp1286I	GDGCHC	3 cut(s)	368, 699, 1581
Bsp13I	TCCGGA	1 cut(s)	267
Bsp1407I	TGTACA	1 cut(s)	750
Bsp143I	GATC	2 cut(s)	1447, 1471
Bsp19I	CCATGG	1 cut(s)	412
BspACI	CCGC	2 cut(s)	900, 906
BspANI	GGCC	5 cut(s)	289, 324, 404, 598, 1629
BspCNI	CTCAG	3 cut(s)	411, 845, 1023
BspEI	TCCGGA	1 cut(s)	267
BspLI	GGNNCC	5 cut(s)	169, 418, 928, 1047, 1449
BspPI	GGATC	3 cut(s)	1442, 1455, 1466
BspQI	GCTCTTC	2 cut(s)	687, 704
BspT107I	GGYRCC	2 cut(s)	416, 926
BsrDI	GCAATG	3 cut(s)	12, 911, 1561
BsrFI	RCCGGY	1 cut(s)	289
BsrGI	TGTACA	1 cut(s)	750
BsrI	ACTGG	6 cut(s)	251, 304, 358, 638, 1357, 1428
BssAI	RCCGGY	1 cut(s)	289
BssECI	CCNNGG	9 cut(s)	63, 412, 420, 593, 647, 789, 790, 791, 826
BssMI	GATC	2 cut(s)	1447, 1471
BssNAI	GTATAC	1 cut(s)	337
BssT1I	CCWWGG	3 cut(s)	412, 420, 826
Bst1107I	GTATAC	1 cut(s)	337
Bst2UI	CCWGG	6 cut(s)	165, 594, 648, 1230, 1288, 1545
Bst4CI	ACNGT	7 cut(s)	148, 199, 409, 730, 985, 1081, 1330
Bst6I	CTCTTC	2 cut(s)	687, 704
BstAUI	TGTACA	1 cut(s)	750
BstC8I	GCNNGC	4 cut(s)	134, 291, 326, 381
BstDEI	CTNAG	4 cut(s)	398, 665, 832, 1010
BstDSI	CCRYGG	2 cut(s)	63, 412
BstF5I	GGATG	5 cut(s)	240, 589, 1362, 1375, 1517
BstHHI	GCGC	1 cut(s)	1106
BstKTI	GATC	2 cut(s)	1450, 1474
BstMAI	GTCTC	1 cut(s)	1022
BstMBI	GATC	2 cut(s)	1447, 1471
BstNI	CCWGG	6 cut(s)	165, 594, 648, 1230, 1288, 1545
BstNSI	RCATGY	2 cut(s)	383, 664
BstSLI	GKGCMC	2 cut(s)	368, 1581
BstV1I	GCAGC	2 cut(s)	667, 863
BstV2I	GAAGAC	2 cut(s)	659, 950
BstX2I	RGATCY	1 cut(s)	1447
BstXI	CCANNNNNNTGG	3 cut(s)	886, 985, 1551
BstYI	RGATCY	1 cut(s)	1447
BstZ17I	GTATAC	1 cut(s)	337
BsuI	GTATCC	2 cut(s)	70, 171
BsuRI	GGCC	5 cut(s)	289, 324, 404, 598, 1629
BtgI	CCRYGG	2 cut(s)	63, 412
BtsCI	GGATG	5 cut(s)	240, 589, 1362, 1375, 1517
Cac8I	GCNNGC	4 cut(s)	134, 291, 326, 381
CfoI	GCGC	1 cut(s)	1106
Cfr10I	RCCGGY	1 cut(s)	289
Cfr13I	GGNCC	6 cut(s)	167, 287, 322, 402, 596, 1628
Cfr9I	CCCGGG	1 cut(s)	790
CseI	GACGC	1 cut(s)	578
Csp6I	GTAC	4 cut(s)	29, 751, 841, 1113
CspCI	CAANNNNNGTGG	2 cut(s)	1186, 1221
CviQI	GTAC	4 cut(s)	29, 751, 841, 1113
DdeI	CTNAG	4 cut(s)	398, 665, 832, 1010
DpnI	GATC	2 cut(s)	1449, 1473
DpnII	GATC	2 cut(s)	1447, 1471
DraI	TTTAAA	1 cut(s)	540
Eam1104I	CTCTTC	2 cut(s)	687, 704
EarI	CTCTTC	2 cut(s)	687, 704
Ecl136II	GAGCTC	1 cut(s)	697
Eco130I	CCWWGG	3 cut(s)	412, 420, 826
Eco24I	GRGCYC	1 cut(s)	699
Eco32I	GATATC	1 cut(s)	1141
Eco47I	GGWCC	1 cut(s)	167
Eco53kI	GAGCTC	1 cut(s)	697
Eco57I	CTGAAG	1 cut(s)	1616
Eco88I	CYCGRG	1 cut(s)	790
EcoICRI	GAGCTC	1 cut(s)	697
EcoRII	CCWGG	6 cut(s)	163, 592, 646, 1228, 1286, 1543
EcoRV	GATATC	1 cut(s)	1141
EcoT14I	CCWWGG	3 cut(s)	412, 420, 826
EcoT22I	ATGCAT	2 cut(s)	74, 1563
EcoT38I	GRGCYC	1 cut(s)	699
ErhI	CCWWGG	3 cut(s)	412, 420, 826
FaqI	GGGAC	5 cut(s)	153, 431, 1276, 1309, 1434
FblI	GTMKAC	1 cut(s)	336
Fnu4HI	GCNGC	2 cut(s)	681, 852
FokI	GGATG	5 cut(s)	227, 576, 1362, 1369, 1524
FriOI	GRGCYC	1 cut(s)	699
Fsp4HI	GCNGC	2 cut(s)	681, 852
FspBI	CTAG	4 cut(s)	183, 1041, 1299, 1675
FspI	TGCGCA	1 cut(s)	1105
GlaI	GCGC	1 cut(s)	1105
GluI	GCNGC	2 cut(s)	681, 852
GsaI	CCCAGC	1 cut(s)	280
HaeIII	GGCC	5 cut(s)	289, 324, 404, 598, 1629
HapII	CCGG	7 cut(s)	56, 268, 290, 320, 791, 1260, 1379
HgaI	GACGC	1 cut(s)	578
HhaI	GCGC	1 cut(s)	1106
Hin6I	GCGC	1 cut(s)	1104
HinP1I	GCGC	1 cut(s)	1104
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HinfI	GANTC	7 cut(s)	19, 24, 256, 669, 1243, 1527, 1637
HpaII	CCGG	7 cut(s)	56, 268, 290, 320, 791, 1260, 1379
HphI	GGTGA	2 cut(s)	337, 506
Hpy166II	GTNNAC	8 cut(s)	217, 337, 751, 753, 889, 1077, 1579, 1615
Hpy188I	TCNGA	8 cut(s)	511, 568, 876, 1013, 1031, 1242, 1452, 1526
Hpy188III	TCNNGA	3 cut(s)	117, 268, 1571
Hpy8I	GTNNAC	8 cut(s)	217, 337, 751, 753, 889, 1077, 1579, 1615
Hpy99I	CGWCG	1 cut(s)	1276
HpyAV	CCTTC	6 cut(s)	150, 772, 941, 1285, 1438, 1673
HpyCH4III	ACNGT	7 cut(s)	148, 199, 409, 730, 985, 1081, 1330
HpyF3I	CTNAG	4 cut(s)	398, 665, 832, 1010
HspAI	GCGC	1 cut(s)	1104
Kpn2I	TCCGGA	1 cut(s)	267
KroI	GCCGGC	1 cut(s)	289
KroNI	GCCGGC	1 cut(s)	291
Kzo9I	GATC	2 cut(s)	1447, 1471
LguI	GCTCTTC	2 cut(s)	687, 704
LmnI	GCTCC	1 cut(s)	469
Lsp1109I	GCAGC	2 cut(s)	667, 863
LweI	GCATC	5 cut(s)	249, 733, 1115, 1152, 1393
MaeI	CTAG	4 cut(s)	183, 1041, 1299, 1675
MaeIII	GTNAC	5 cut(s)	142, 814, 1121, 1150, 1658
MalI	GATC	2 cut(s)	1449, 1473
MboI	GATC	2 cut(s)	1447, 1471
MfeI	CAATTG	1 cut(s)	1491
MflI	RGATCY	1 cut(s)	1447
MhlI	GDGCHC	3 cut(s)	368, 699, 1581
MlyI	GAGTC	1 cut(s)	33
MmeI	TCCRAC	1 cut(s)	899
Mph1103I	ATGCAT	2 cut(s)	74, 1563
MroI	TCCGGA	1 cut(s)	267
MroNI	GCCGGC	1 cut(s)	289
MroXI	GAANNNNTTC	2 cut(s)	1457, 1641
MseI	TTAA	6 cut(s)	93, 539, 629, 705, 725, 1398
MslI	CAYNNNNRTG	6 cut(s)	373, 884, 983, 1157, 1355, 1389
MspI	CCGG	7 cut(s)	56, 268, 290, 320, 791, 1260, 1379
MunI	CAATTG	1 cut(s)	1491
Mva1269I	GAATGC	1 cut(s)	74
MvaI	CCWGG	6 cut(s)	165, 594, 648, 1230, 1288, 1545
NaeI	GCCGGC	1 cut(s)	291
NciI	CCSGG	4 cut(s)	321, 791, 792, 1261
NcoI	CCATGG	1 cut(s)	412
NdeII	GATC	2 cut(s)	1447, 1471
NgoMIV	GCCGGC	1 cut(s)	289
NlaIV	GGNNCC	5 cut(s)	169, 418, 928, 1047, 1449
NmuCI	GTSAC	3 cut(s)	142, 1150, 1658
NsbI	TGCGCA	1 cut(s)	1105
NsiI	ATGCAT	2 cut(s)	74, 1563
NspI	RCATGY	2 cut(s)	383, 664
OliI	CACNNNNGTG	3 cut(s)	373, 983, 1157
PaeI	GCATGC	1 cut(s)	383
PciSI	GCTCTTC	2 cut(s)	687, 704
PctI	GAATGC	1 cut(s)	74
PdiI	GCCGGC	1 cut(s)	291
PdmI	GAANNNNTTC	2 cut(s)	1457, 1641
PfeI	GAWTC	6 cut(s)	19, 256, 669, 1243, 1527, 1637
PflMI	CCANNNNNTGG	1 cut(s)	1508
PfoI	TCCNGGA	2 cut(s)	1228, 1543
PkrI	GCNGC	2 cut(s)	682, 853
PleI	GAGTC	1 cut(s)	32
PpsI	GAGTC	1 cut(s)	32
PsiI	TTATAA	1 cut(s)	1251
Psp124BI	GAGCTC	1 cut(s)	699
Psp6I	CCWGG	6 cut(s)	163, 592, 646, 1228, 1286, 1543
PspFI	CCCAGC	1 cut(s)	276
PspGI	CCWGG	6 cut(s)	163, 592, 646, 1228, 1286, 1543
PspN4I	GGNNCC	5 cut(s)	169, 418, 928, 1047, 1449
PspPI	GGNCC	6 cut(s)	167, 287, 322, 402, 596, 1628
PsuI	RGATCY	1 cut(s)	1447
RsaI	GTAC	4 cut(s)	30, 752, 842, 1114
RsaNI	GTAC	4 cut(s)	29, 751, 841, 1113
RseI	CAYNNNNRTG	6 cut(s)	373, 884, 983, 1157, 1355, 1389
SacI	GAGCTC	1 cut(s)	699
SapI	GCTCTTC	2 cut(s)	687, 704
SaqAI	TTAA	6 cut(s)	93, 539, 629, 705, 725, 1398
SatI	GCNGC	2 cut(s)	681, 852
Sau3AI	GATC	2 cut(s)	1447, 1471
Sau96I	GGNCC	6 cut(s)	167, 287, 322, 402, 596, 1628
ScaI	AGTACT	1 cut(s)	842
SchI	GAGTC	1 cut(s)	33
SduI	GDGCHC	3 cut(s)	368, 699, 1581
SfaNI	GCATC	5 cut(s)	249, 733, 1115, 1152, 1393
SinI	GGWCC	1 cut(s)	167
SmaI	CCCGGG	1 cut(s)	792
SmiMI	CAYNNNNRTG	6 cut(s)	373, 884, 983, 1157, 1355, 1389
SmlI	CTYRAG	1 cut(s)	115
SmoI	CTYRAG	1 cut(s)	115
SphI	GCATGC	1 cut(s)	383
SsiI	CCGC	2 cut(s)	900, 906
SspMI	CTAG	4 cut(s)	183, 1041, 1299, 1675
SstI	GAGCTC	1 cut(s)	699
StyI	CCWWGG	3 cut(s)	412, 420, 826
TaaI	ACNGT	7 cut(s)	148, 199, 409, 730, 985, 1081, 1330
TaqI	TCGA	4 cut(s)	22, 79, 259, 741
TatI	WGTACW	2 cut(s)	750, 840
TfiI	GAWTC	6 cut(s)	19, 256, 669, 1243, 1527, 1637
Tru1I	TTAA	6 cut(s)	93, 539, 629, 705, 725, 1398
Tru9I	TTAA	6 cut(s)	93, 539, 629, 705, 725, 1398
TseFI	GTSAC	3 cut(s)	142, 1150, 1658
TseI	GCWGC	2 cut(s)	680, 851
Tsp45I	GTSAC	3 cut(s)	142, 1150, 1658
TspDTI	ATGAA	5 cut(s)	705, 853, 1379, 1457, 1650
TspGWI	ACGGA	3 cut(s)	52, 530, 1038
TspMI	CCCGGG	1 cut(s)	790
Van91I	CCANNNNNTGG	1 cut(s)	1508
VneI	GTGCAC	1 cut(s)	1577
VpaK11BI	GGWCC	1 cut(s)	167
XapI	RAATTY	3 cut(s)	1276, 1429, 1457
XceI	RCATGY	2 cut(s)	383, 664
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1509
XmaI	CCCGGG	1 cut(s)	790
XmiI	GTMKAC	1 cut(s)	336
XmnI	GAANNNNTTC	2 cut(s)	1457, 1641
XspI	CTAG	4 cut(s)	183, 1041, 1299, 1675
ZrmI	AGTACT	1 cut(s)	842
Zsp2I	ATGCAT	2 cut(s)	74, 1563

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.