FvH4_3g39840

Methyltransferase FkbM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0015585
Physical Location & Seq
Reverse (-)
33759865 .. 33761690
1826 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g39840.t1

Sequence Viewer

Length: 1515 bp
ATGGATTCTCCGAAACTAAAACCCAACCAGCTAAGAACCTCCCTCGCCCGCCTCCTCACCTTCGCCGTCCTCGTCCTCGCCGTCCGCTTCGCCTACGTCATCACCCTCGCCGGCGAGTCCTGCGGCTACAACGACTTCTGCTTCTTCCCCGACACCTTCAGACTCCACAGCCGCGTAGTCCCACAAAACGCCGCCGTTTCGGGCGCCGTACTTCCACGTGTCCCCGACCTCTGGACGACCAAGAAGTGGCGCCGAACAGTGGATTACTACTCCGCAATCTTCCAAGAACTCATCGCCGAGGGCTTCCTCTCCCCCAATTCTCGGGCCCTCTGCGTGGGCACACGCGCCGGAGAGGACGTGCTCGCGCTTAAAGAAAACGGCGTCGTTTACTCGATTGGAATCTCCGCCAACACCGCTTCTCCGCCGTTGATCGTCCCCGGGGCCCCGCACCTCCAGCCGTTCGATGAAGCCACCTTCGACTTCGAATTCTCCGCCAACGGGTCACTGGACCGGTCGGGTCGACCCGCGGATTTCGCGGCCGAGGTCTGCCGGACCCTCAAACCGGGCGGGTTCTTCGTGGCCCAGATCTTCGCGAAAGACAACTACAGCTTCCATTCCCTTCTTGATTTGTTCAACTGCTGCCGCCTCATCCGCACCCGCGACGTCGACGGCGTCGATACGACGTCGGTTCGGGAAGTCGTGCTGAGAAAAAAGACGCAATTTCAAAACCCTAGAAATTTGGGGCTTAATGGCAATTCCAGTAAGAACTGTGAAATCCCGGGGTATAAACGGGAATTGGTGCAAAAAGCAGAGGCCTTGATAGAGCAGGAGCCACTGAAGCCGTGGGTTGCAAGGAAGAGAAGCTTGAAGAAGGTCAAGTACTTGACTTCAATGGCGGACATCAGCTTTAAGCAGAGGTATGTTTACATTGATGTTGGAGCTCGTGGATATGGGTCTAGTATAGGGAGCTGGTTCAAGAAGCAGTACCCAAAACAGGGCAAGAGCTTTGAGGTTTATGCAATGGAGGCTAATAGGGTTTTTCATGAGGAGTATAGAGATAAGGAAGGGGTTAGTCTTGTGCCTTATGCAGCTTGGGTGAGGAATGAGACGCTGTTCTTTGAGATTACGAGGGATTCGGGTTCGAAAGACGTGGAGGTGGCTGGAGGAGTTGGGAGGATTAATCACAATGTGAGAAGCTCTTCGAGTTATGGGGAGGAGGTGGATAAGATAAAGGGGATTGATTTTGTGGAGTGGTTGAAGAGGAGTGTTTCGGGGAGCGATTTAGTGGTGGTGAGGATAGATGTGGAAGGGAGTGAGTTTTATTTGGTTCCTAGGTTGATTGAGAGTGGAGCAATTTGCTTGATTGATGAGGTGTTTATGGAATGTCATTACAACAGGTGGCAGAGGTGCTGCCGCGGTCAGCGCAGTGCCAAGTTCAAGAGGAGTTATGATCAGTGCTTGGAGCTGTTCAATAAGCTCAGAGCGGCTGGAGTTCTTGTACATCAATGGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11 Methyltransf_21

Protein Analysis

505

Amino Acids

57.01

Weight (kDa)

9.03

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7870 PF25276 272 - 367 2.4e-10 Domain of unknown function (DUF7870)
DUF7870 PF25276 406 - 504 2.9e-19 Domain of unknown function (DUF7870)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015585)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g39840
malus_domestica MD11G1059300.v1.1
prunus_persica Prupe.6G047200_v2.0.a1
pyrus_communis pycom11g04920
rosa_chinensis RchiOBHm_Chr5g0071801
rosa_laevigata RLG00000036249
rosa_multiflora Rmu_co8341309.1_g000001 Rmu_sc0001113.1_g000014
rosa_roxburghii Rroxscaffold_1G00009360
rosa_rugosa Rorug05G0414700 Rorug05G0414700
rosa_samantha Rh5AG470800 Rh5BG490600 Rh5CG514600 Rh5DG501900
rosa_wichuraiana Rw5G043760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 666, 686
AccB1I GGYRCC 2 cut(s) 203, 249
AccB7I CCANNNNNTGG 1 cut(s) 246
AccBSI CCGCTC 1 cut(s) 1484
AccI GTMKAC 2 cut(s) 520, 666
AccII CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
AcoI YGGCCR 1 cut(s) 537
AcsI RAATTY 2 cut(s) 485, 736
AcuI CTGAAG 2 cut(s) 142, 857
AcvI CACGTG 1 cut(s) 218
AcyI GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
AdeI CACNNNGTG 1 cut(s) 1189
AfaI GTAC 4 cut(s) 210, 881, 986, 1500
AfiI CCNNNNNNNGG 9 cut(s) 231, 246, 259, 321, 334, 498, 562, 994, 995
AflIII ACRYGT 1 cut(s) 217
AgeI ACCGGT 1 cut(s) 510
AgsI TTSAA 8 cut(s) 634, 725, 868, 891, 976, 1258, 1438, 1471
AjiI CACGTC 2 cut(s) 358, 1150
Alw21I GWGCWC 2 cut(s) 363, 943
Alw26I GTCTC 1 cut(s) 1100
Ama87I CYCGRG 3 cut(s) 321, 437, 778
AoxI GGCC 5 cut(s) 324, 441, 537, 579, 813
ApaI GGGCCC 2 cut(s) 328, 445
ApeKI GCWGC 3 cut(s) 639, 1088, 1410
ApoI RAATTY 2 cut(s) 485, 736
AseI ATTAAT 1 cut(s) 1179
AsiGI ACCGGT 1 cut(s) 510
Asp700I GAANNNNTTC 1 cut(s) 1198
AspA2I CCTAGG 1 cut(s) 1331
AspLEI GCGC 5 cut(s) 206, 252, 347, 367, 1425
AspS9I GGNCC 7 cut(s) 324, 325, 441, 442, 508, 552, 580
AsuC2I CCSGG 5 cut(s) 438, 439, 564, 779, 780
AsuHPI GGTGA 4 cut(s) 49, 94, 1108, 1303
AsuII TTCGAA 2 cut(s) 483, 1142
AvaI CYCGRG 3 cut(s) 321, 437, 778
AvaII GGWCC 2 cut(s) 508, 552
AvrII CCTAGG 1 cut(s) 1331
BaeGI GKGCMC 3 cut(s) 328, 341, 445
BanI GGYRCC 2 cut(s) 203, 249
BanII GRGCYC 3 cut(s) 328, 445, 943
BarI GAAGNNNNNNTAC 2 cut(s) 863, 895
BauI CACGAG 1 cut(s) 942
BbrPI CACGTG 1 cut(s) 218
Bbv12I GWGCWC 2 cut(s) 363, 943
BbvI GCAGC 3 cut(s) 626, 1100, 1397
BceAI ACGGC 9 cut(s) 50, 65, 179, 191, 394, 409, 442, 685, 826
BclI TGATCA 1 cut(s) 1450
BcnI CCSGG 5 cut(s) 438, 439, 564, 779, 780
BcoDI GTCTC 1 cut(s) 1100
BfaI CTAG 3 cut(s) 732, 957, 1332
BfmI CTRYAG 1 cut(s) 604
BfoI RGCGCY 2 cut(s) 207, 253
BglII AGATCT 1 cut(s) 585
BlnI CCTAGG 1 cut(s) 1331
BmcAI AGTACT 1 cut(s) 881
Bme1390I CCNGG 5 cut(s) 438, 439, 564, 779, 780
Bme18I GGWCC 2 cut(s) 508, 552
BmeT110I CYCGRG 3 cut(s) 321, 437, 778
BmgBI CACGTC 2 cut(s) 358, 1150
BmgT120I GGNCC 7 cut(s) 324, 325, 441, 442, 508, 552, 580
BmiI GGNNCC 9 cut(s) 205, 251, 326, 442, 443, 444, 554, 831, 1329
BmrFI CCNGG 5 cut(s) 438, 439, 564, 779, 780
BpmI CTGGAG 3 cut(s) 437, 1182, 1509
Bpu14I TTCGAA 2 cut(s) 483, 1142
BpuMI CCSGG 5 cut(s) 438, 439, 564, 779, 780
BsaAI YACGTR 1 cut(s) 218
BsaBI GATNNNNATC 1 cut(s) 398
BsaHI GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 6 cut(s) 342, 372, 403, 433, 1482, 1512
Bsc4I CCNNNNNNNGG 9 cut(s) 231, 246, 259, 321, 334, 498, 562, 994, 995
Bse118I RCCGGY 2 cut(s) 110, 510
Bse1I ACTGG 2 cut(s) 510, 759
Bse3DI GCAATG 1 cut(s) 1026
Bse8I GATNNNNATC 1 cut(s) 398
BseGI GGATG 1 cut(s) 648
BseJI GATNNNNATC 1 cut(s) 398
BseLI CCNNNNNNNGG 9 cut(s) 231, 246, 259, 321, 334, 498, 562, 994, 995
BseMI GCAATG 1 cut(s) 1026
BseMII CTCAG 2 cut(s) 695, 1492
BseNI ACTGG 2 cut(s) 510, 759
BseRI GAGGAG 6 cut(s) 44, 1061, 1179, 1229, 1276, 1456
BseSI GKGCMC 3 cut(s) 328, 341, 445
BseX3I CGGCCG 1 cut(s) 537
BseXI GCAGC 3 cut(s) 626, 1100, 1397
Bsh1236I CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
Bsh1285I CGRYCG 2 cut(s) 515, 540
BshFI GGCC 5 cut(s) 326, 443, 539, 581, 815
BshNI GGYRCC 2 cut(s) 203, 249
BshTI ACCGGT 1 cut(s) 510
BsiEI CGRYCG 2 cut(s) 515, 540
BsiHKAI GWGCWC 2 cut(s) 363, 943
BsiHKCI CYCGRG 3 cut(s) 321, 437, 778
BsiSI CCGG 7 cut(s) 111, 348, 438, 511, 550, 563, 779
BslFI GGGAC 3 cut(s) 164, 206, 419
BslI CCNNNNNNNGG 9 cut(s) 231, 246, 259, 321, 334, 498, 562, 994, 995
BsmAI GTCTC 1 cut(s) 1100
BsmBI CGTCTC 1 cut(s) 1100
BsmFI GGGAC 3 cut(s) 164, 206, 419
BsnI GGCC 5 cut(s) 326, 443, 539, 581, 815
BsoBI CYCGRG 3 cut(s) 321, 437, 778
Bsp119I TTCGAA 2 cut(s) 483, 1142
Bsp120I GGGCCC 2 cut(s) 324, 441
Bsp1286I GDGCHC 5 cut(s) 328, 341, 363, 445, 943
Bsp1407I TGTACA 1 cut(s) 1498
Bsp143I GATC 3 cut(s) 429, 585, 1450
Bsp68I TCGCGA 1 cut(s) 593
BspANI GGCC 5 cut(s) 326, 443, 539, 581, 815
BspCNI CTCAG 2 cut(s) 696, 1491
BspFNI CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
BspHI TCATGA 1 cut(s) 1042
BspLI GGNNCC 9 cut(s) 205, 251, 326, 442, 443, 444, 554, 831, 1329
BspQI GCTCTTC 1 cut(s) 1204
BspT104I TTCGAA 2 cut(s) 483, 1142
BspT107I GGYRCC 2 cut(s) 203, 249
BsrBI CCGCTC 1 cut(s) 1484
BsrDI GCAATG 1 cut(s) 1026
BsrFI RCCGGY 2 cut(s) 110, 510
BsrGI TGTACA 1 cut(s) 1498
BsrI ACTGG 2 cut(s) 510, 759
BssAI RCCGGY 2 cut(s) 110, 510
BssMI GATC 3 cut(s) 429, 585, 1450
BssNI GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
BssSI CACGAG 1 cut(s) 942
BssT1I CCWWGG 1 cut(s) 1331
Bst2BI CACGAG 1 cut(s) 942
Bst4CI ACNGT 2 cut(s) 259, 770
Bst6I CTCTTC 3 cut(s) 851, 1204, 1253
BstACI GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
BstAUI TGTACA 1 cut(s) 1498
BstBAI YACGTR 1 cut(s) 218
BstBI TTCGAA 2 cut(s) 483, 1142
BstC8I GCNNGC 3 cut(s) 49, 112, 363
BstDEI CTNAG 3 cut(s) 32, 704, 1478
BstDSI CCRYGG 3 cut(s) 525, 842, 1414
BstF5I GGATG 1 cut(s) 648
BstFNI CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
BstH2I RGCGCY 2 cut(s) 207, 253
BstHHI GCGC 5 cut(s) 206, 252, 347, 367, 1425
BstKTI GATC 3 cut(s) 432, 588, 1453
BstMAI GTCTC 1 cut(s) 1100
BstMBI GATC 3 cut(s) 429, 585, 1450
BstMCI CGRYCG 2 cut(s) 515, 540
BstMWI GCNNNNNNNGC 8 cut(s) 120, 413, 454, 533, 651, 838, 1025, 1422
BstSCI CCNGG 5 cut(s) 436, 437, 562, 777, 778
BstSFI CTRYAG 1 cut(s) 604
BstSLI GKGCMC 3 cut(s) 328, 341, 445
BstUI CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
BstV1I GCAGC 3 cut(s) 626, 1100, 1397
BstX2I RGATCY 1 cut(s) 585
BstYI RGATCY 1 cut(s) 585
BstZI CGGCCG 1 cut(s) 537
BsuRI GGCC 5 cut(s) 326, 443, 539, 581, 815
BtgI CCRYGG 3 cut(s) 525, 842, 1414
BtgZI GCGATG 1 cut(s) 277
BtrI CACGTC 2 cut(s) 358, 1150
BtsCI GGATG 1 cut(s) 648
BtsI GCAGTG 1 cut(s) 1432
BtsIMutI CAGTG 5 cut(s) 264, 503, 833, 1432, 1460
BtuMI TCGCGA 1 cut(s) 593
Cac8I GCNNGC 3 cut(s) 49, 112, 363
CciI TCATGA 1 cut(s) 1042
CfoI GCGC 5 cut(s) 206, 252, 347, 367, 1425
Cfr10I RCCGGY 2 cut(s) 110, 510
Cfr13I GGNCC 7 cut(s) 324, 325, 441, 442, 508, 552, 580
Cfr42I CCGCGG 2 cut(s) 528, 1417
Cfr9I CCCGGG 2 cut(s) 437, 778
CseI GACGC 4 cut(s) 370, 661, 724, 1117
Csp6I GTAC 4 cut(s) 209, 880, 985, 1499
CspAI ACCGGT 1 cut(s) 510
CviAII CATG 1 cut(s) 1043
CviQI GTAC 4 cut(s) 209, 880, 985, 1499
DdeI CTNAG 3 cut(s) 32, 704, 1478
DinI GGCGCC 2 cut(s) 205, 251
DpnI GATC 3 cut(s) 431, 587, 1452
DpnII GATC 3 cut(s) 429, 585, 1450
DraIII CACNNNGTG 1 cut(s) 1189
EaeI YGGCCR 1 cut(s) 537
EagI CGGCCG 1 cut(s) 537
Eam1104I CTCTTC 3 cut(s) 851, 1204, 1253
EarI CTCTTC 3 cut(s) 851, 1204, 1253
EciI GGCGGA 4 cut(s) 394, 411, 481, 911
Ecl136II GAGCTC 1 cut(s) 941
EclXI CGGCCG 1 cut(s) 537
Eco130I CCWWGG 1 cut(s) 1331
Eco147I AGGCCT 1 cut(s) 815
Eco24I GRGCYC 3 cut(s) 328, 445, 943
Eco47I GGWCC 2 cut(s) 508, 552
Eco52I CGGCCG 1 cut(s) 537
Eco53kI GAGCTC 1 cut(s) 941
Eco57I CTGAAG 2 cut(s) 142, 857
Eco72I CACGTG 1 cut(s) 218
Eco88I CYCGRG 3 cut(s) 321, 437, 778
EcoICRI GAGCTC 1 cut(s) 941
EcoO109I RGGNCCY 3 cut(s) 325, 441, 442
EcoRI GAATTC 1 cut(s) 485
EcoT14I CCWWGG 1 cut(s) 1331
EcoT38I GRGCYC 3 cut(s) 328, 445, 943
EgeI GGCGCC 2 cut(s) 205, 251
EheI GGCGCC 2 cut(s) 205, 251
ErhI CCWWGG 1 cut(s) 1331
Esp3I CGTCTC 1 cut(s) 1100
FaeI CATG 1 cut(s) 1046
FalI AAGNNNNNCTT 2 cut(s) 848, 880
FaqI GGGAC 3 cut(s) 164, 206, 419
FatI CATG 1 cut(s) 1042
FauI CCCGC 5 cut(s) 56, 453, 532, 560, 665
FbaI TGATCA 1 cut(s) 1450
FblI GTMKAC 2 cut(s) 520, 666
FokI GGATG 1 cut(s) 635
FriOI GRGCYC 3 cut(s) 328, 445, 943
FspBI CTAG 3 cut(s) 732, 957, 1332
GlaI GCGC 5 cut(s) 205, 251, 346, 366, 1424
GsuI CTGGAG 3 cut(s) 437, 1182, 1509
HaeII RGCGCY 2 cut(s) 207, 253
HaeIII GGCC 5 cut(s) 326, 443, 539, 581, 815
HapII CCGG 7 cut(s) 111, 348, 438, 511, 550, 563, 779
HgaI GACGC 4 cut(s) 370, 661, 724, 1117
HhaI GCGC 5 cut(s) 206, 252, 347, 367, 1425
Hin1I GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
Hin1II CATG 1 cut(s) 1046
Hin6I GCGC 5 cut(s) 204, 250, 345, 365, 1423
HinP1I GCGC 5 cut(s) 204, 250, 345, 365, 1423
HincII GTYRAC 2 cut(s) 521, 667
HindII GTYRAC 2 cut(s) 521, 667
HindIII AAGCTT 1 cut(s) 862
HinfI GANTC 5 cut(s) 5, 116, 162, 399, 1133
HpaII CCGG 7 cut(s) 111, 348, 438, 511, 550, 563, 779
HphI GGTGA 4 cut(s) 49, 94, 1108, 1303
Hpy166II GTNNAC 4 cut(s) 388, 521, 667, 925
Hpy188I TCNGA 3 cut(s) 12, 161, 1481
Hpy188III TCNNGA 7 cut(s) 232, 592, 623, 692, 976, 1043, 1438
Hpy8I GTNNAC 4 cut(s) 388, 521, 667, 925
Hpy99I CGWCG 7 cut(s) 386, 665, 668, 671, 677, 685, 688
HpyAV CCTTC 7 cut(s) 70, 166, 484, 629, 865, 1058, 1301
HpyCH4III ACNGT 2 cut(s) 259, 770
HpyCH4IV ACGT 6 cut(s) 96, 217, 357, 663, 683, 1149
HpyCH4V TGCA 4 cut(s) 802, 851, 1019, 1088
HpyF10VI GCNNNNNNNGC 8 cut(s) 120, 413, 454, 533, 651, 838, 1025, 1422
HpyF3I CTNAG 3 cut(s) 32, 704, 1478
HpySE526I ACGT 6 cut(s) 96, 217, 357, 663, 683, 1149
Hsp92I GRCGYC 6 cut(s) 204, 250, 381, 663, 672, 683
Hsp92II CATG 1 cut(s) 1046
HspAI GCGC 5 cut(s) 204, 250, 345, 365, 1423
KasI GGCGCC 2 cut(s) 203, 249
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 1 cut(s) 1450
KspI CCGCGG 2 cut(s) 528, 1417
Kzo9I GATC 3 cut(s) 429, 585, 1450
LguI GCTCTTC 1 cut(s) 1204
LmnI GCTCC 6 cut(s) 829, 938, 966, 1275, 1349, 1462
Lsp1109I GCAGC 3 cut(s) 626, 1100, 1397
MaeI CTAG 3 cut(s) 732, 957, 1332
MaeII ACGT 6 cut(s) 96, 217, 357, 663, 683, 1149
MaeIII GTNAC 1 cut(s) 501
MalI GATC 3 cut(s) 431, 587, 1452
MbiI CCGCTC 1 cut(s) 1484
MboI GATC 3 cut(s) 429, 585, 1450
MboII GAAGA 8 cut(s) 136, 271, 565, 580, 868, 880, 1191, 1270
MflI RGATCY 1 cut(s) 585
MhlI GDGCHC 5 cut(s) 328, 341, 363, 445, 943
MluCI AATT 7 cut(s) 316, 485, 719, 736, 754, 794, 1353
Mly113I GGCGCC 2 cut(s) 204, 250
MlyI GAGTC 2 cut(s) 125, 156
MmeI TCCRAC 1 cut(s) 916
MreI CGCCGGCG 1 cut(s) 110
MroNI GCCGGC 1 cut(s) 110
MroXI GAANNNNTTC 1 cut(s) 1198
MseI TTAA 4 cut(s) 369, 747, 909, 1179
MspA1I CMGCKG 2 cut(s) 527, 1416
MspI CCGG 7 cut(s) 111, 348, 438, 511, 550, 563, 779
MspR9I CCNGG 5 cut(s) 438, 439, 564, 779, 780
MvnI CGCG 8 cut(s) 174, 345, 365, 527, 536, 593, 660, 1416
MwoI GCNNNNNNNGC 8 cut(s) 120, 413, 454, 533, 651, 838, 1025, 1422
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 2 cut(s) 204, 250
NciI CCSGG 5 cut(s) 438, 439, 564, 779, 780
NdeII GATC 3 cut(s) 429, 585, 1450
NgoMIV GCCGGC 1 cut(s) 110
NlaIII CATG 1 cut(s) 1046
NlaIV GGNNCC 9 cut(s) 205, 251, 326, 442, 443, 444, 554, 831, 1329
NmeAIII GCCGAG 2 cut(s) 322, 565
NmuCI GTSAC 1 cut(s) 501
NruI TCGCGA 1 cut(s) 593
NspV TTCGAA 2 cut(s) 483, 1142
PagI TCATGA 1 cut(s) 1042
PceI AGGCCT 1 cut(s) 815
PciSI GCTCTTC 1 cut(s) 1204
PcsI WCGNNNNNNNCGW 4 cut(s) 69, 78, 669, 672
PdiI GCCGGC 1 cut(s) 112
PdmI GAANNNNTTC 1 cut(s) 1198
PfeI GAWTC 3 cut(s) 5, 399, 1133
PflFI GACNNNGTC 1 cut(s) 671
PflMI CCANNNNNTGG 1 cut(s) 246
PinAI ACCGGT 1 cut(s) 510
PleI GAGTC 2 cut(s) 124, 156
PluTI GGCGCC 2 cut(s) 207, 253
PmaCI CACGTG 1 cut(s) 218
PmlI CACGTG 1 cut(s) 218
PpsI GAGTC 2 cut(s) 124, 156
Ppu21I YACGTR 1 cut(s) 218
PshBI ATTAAT 1 cut(s) 1179
Psp124BI GAGCTC 1 cut(s) 943
PspCI CACGTG 1 cut(s) 218
PspN4I GGNNCC 9 cut(s) 205, 251, 326, 442, 443, 444, 554, 831, 1329
PspOMI GGGCCC 2 cut(s) 324, 441
PspPI GGNCC 7 cut(s) 324, 325, 441, 442, 508, 552, 580
PsuI RGATCY 1 cut(s) 585
PsyI GACNNNGTC 1 cut(s) 671
RruI TCGCGA 1 cut(s) 593
RsaI GTAC 4 cut(s) 210, 881, 986, 1500
RsaNI GTAC 4 cut(s) 209, 880, 985, 1499
SacI GAGCTC 1 cut(s) 943
SacII CCGCGG 2 cut(s) 528, 1417
SalI GTCGAC 2 cut(s) 519, 665
SapI GCTCTTC 1 cut(s) 1204
SaqAI TTAA 4 cut(s) 369, 747, 909, 1179
Sau3AI GATC 3 cut(s) 429, 585, 1450
Sau96I GGNCC 7 cut(s) 324, 325, 441, 442, 508, 552, 580
ScaI AGTACT 1 cut(s) 881
SchI GAGTC 2 cut(s) 125, 156
ScrFI CCNGG 5 cut(s) 438, 439, 564, 779, 780
SduI GDGCHC 5 cut(s) 328, 341, 363, 445, 943
SfcI CTRYAG 1 cut(s) 604
SfoI GGCGCC 2 cut(s) 205, 251
Sfr303I CCGCGG 2 cut(s) 528, 1417
SfuI TTCGAA 2 cut(s) 483, 1142
SgrAI CRCCGGYG 1 cut(s) 110
SgrBI CCGCGG 2 cut(s) 528, 1417
SgrDI CGTCGACG 1 cut(s) 665
SinI GGWCC 2 cut(s) 508, 552
SmaI CCCGGG 2 cut(s) 439, 780
Sse9I AATT 7 cut(s) 316, 485, 719, 736, 754, 794, 1353
SseBI AGGCCT 1 cut(s) 815
SspDI GGCGCC 2 cut(s) 203, 249
SspMI CTAG 3 cut(s) 732, 957, 1332
SstI GAGCTC 1 cut(s) 943
StuI AGGCCT 1 cut(s) 815
StyD4I CCNGG 5 cut(s) 436, 437, 562, 777, 778
StyI CCWWGG 1 cut(s) 1331
TaaI ACNGT 2 cut(s) 259, 770
TaiI ACGT 6 cut(s) 99, 220, 360, 666, 686, 1152
TaqI TCGA 9 cut(s) 392, 462, 477, 483, 520, 666, 675, 1142, 1202
TasI AATT 7 cut(s) 316, 485, 719, 736, 754, 794, 1353
TatI WGTACW 2 cut(s) 879, 1498
TauI GCSGC 7 cut(s) 126, 174, 194, 539, 645, 1416, 1487
TfiI GAWTC 3 cut(s) 5, 399, 1133
Tru1I TTAA 4 cut(s) 369, 747, 909, 1179
Tru9I TTAA 4 cut(s) 369, 747, 909, 1179
TscAI CASTG 5 cut(s) 264, 510, 840, 1432, 1460
TseFI GTSAC 1 cut(s) 501
TseI GCWGC 3 cut(s) 639, 1088, 1410
Tsp45I GTSAC 1 cut(s) 501
TspDTI ATGAA 2 cut(s) 480, 1031
TspMI CCCGGG 2 cut(s) 437, 778
TspRI CASTG 5 cut(s) 264, 510, 840, 1432, 1460
Tth111I GACNNNGTC 1 cut(s) 671
Van91I CCANNNNNTGG 1 cut(s) 246
VpaK11BI GGWCC 2 cut(s) 508, 552
VspI ATTAAT 1 cut(s) 1179
XapI RAATTY 2 cut(s) 485, 736
XcmI CCANNNNNNNNNTGG 2 cut(s) 502, 840
XmaI CCCGGG 2 cut(s) 437, 778
XmaJI CCTAGG 1 cut(s) 1331
XmiI GTMKAC 2 cut(s) 520, 666
XmnI GAANNNNTTC 1 cut(s) 1198
XspI CTAG 3 cut(s) 732, 957, 1332
ZraI GACGTC 2 cut(s) 664, 684
ZrmI AGTACT 1 cut(s) 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.