Rorug05G0414700
WRKY Family

Methyltransferase FkbM domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000183
Physical Location & Seq
Forward (+)
57342158 .. 57430697
88540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0414700.1

Sequence Viewer

Length: 1830 bp
ATGAAGTTCCAAGTGGGAGTTTGCCTTGCTTGTATTATAAGTTTGATTTCGATTCAGCAAAGTCTCTGTGATGGGGTTTCCAATACTTCTGGTGTAACAGATTGGACGTGTAGATGTTCTATTCCGTTTCAAGGAAACCGGAGCTACACTCTAGAATCTAACTGTTCAGCATCCTGTAATTGCAGTCAGGATGATGTAAGTAATAGCAAATGGACATGTTTATGTGATGCCAATGGCCTTCCTAAAGTGGCAGCTGATGGTCATAATACTAGTTGCTTTACAGCCTGCAACTGCACTTCTGGATCTCTTGATGCAGCAGAATCTTCGAAAAAGCGCTCTTCAAGCAAAGTTGTTGTGATTGTTCTTTTACTATGTGTCATACTTACAACTTTCGCTTTTCTTGCCTCGGTGGCATGTTACTTCTATCGAAGGGACAAGTGCACTGTTCACCCACCAATATTTTCATCAGAAAAGGAAACAAGTTGCAACAGTGGTACCGACTTAATTAGCCATAGGAGTTCCTCAATGCTTGAGACCAAAATTTATATAAATTCCCCCATCAATCCAGGCATAGGCTGCTTTACCTCTTGCTTATTTGGAAGCAAAACAGGACCTTCACCTGGAGCAATTATTCAATTTTCATATTTGGAGCTGGAAAATGCAACCAATAAGTTTTCAGATTCCAATCTAATAGGACTTGGAGGAAGTAGTTATGTTTATCGCGGTCAACTCAAAGATGGAAGTATTCTGGCAGTTAAGCGCCTTAAGACTCAGAAAGGGCCTGATATGGATTCTGTCTTTTTAACTGAGATTGAACTGTTATCCAGACTTCATCATTGTCATGTGGTACCTTTGCTCGGCTACTGCTTCGAAACCCATGGAAAAAATACTGAGAGGCTATTGGTATTTGAGTACATGAATAATGGTAACCTGAGAGATTGTCTGGATGGGTCTGAAGGGAAGAACATGGATTGGAATACTCGAGTAGCAATTGCCATTGGAGCTGCAAGGGGTTTGGAGTATCTCCATGATGCAGCTGCTCCAAGAATACTGCATAGAGATGTCAAATCCACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCGAAACGCTTAAAAGCTGATGGTCTCCCTAGTGCATCTAGTTCTCCAGCAAGAATGCAAGGTACATTTGGTTATTTTGCACCGGAGTATGCAATTGTTGGAAGAGCATCTCTCAAGTCAGACGTTTTCAGTTTTGGGGTAGTTCTTCTTGAGCTTATCACTGGCAGGAAGCCCATTCACAGATCAACCAACAAGCTAGAAGAAAGCCTTGTCATTTGGGCTACCCCTCGATTACAGGATAGTAAGCGAGTAATCGCAGAGTTGCCTGATCCTGATTTGAATGGGAACTTCCCAGAAGAAGATATGCACATAATGGCTTACTTAGCAAAGGAATGCCTACTCTTGGACCCTGATTCTAGACCAACTATGAGTGAGGTTGTCCAAATCCTTTCGACTATTGCACCAGAGAGATCTAAAAGGAGAGGCATGCCTGTAAATTTGTTTCAGCACATGGGTCTTAAAGAAGCTGAGGAGCTAAGGCGAGACAAATCCGGAAAATGTTCACTTCGGTGTTCACTGCCACTAGATATTGACCGCAACCTCGGCGTTGAAAGAAGTGAAGATACCACTTCAGATAGATATATGGAAAGATTGATCCTCTTGACTTCAAACGCTAGGAGTTGGCGTGCCTCTGATGATGAAACAGTGGACTTGACTGAGCCCAGGTTCGAGTCATTTTCCATAGCAAATACTAAACCTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_11 Methyltransf_21

Protein Analysis

609

Amino Acids

67.13

Weight (kDa)

6.48

Isoelectric Point (pI)

51.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 227 - 503 2.7e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 230 - 505 1.1e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 38
Acc65I GGTACC 2 cut(s) 494, 847
AccB1I GGYRCC 2 cut(s) 494, 847
AccII CGCG 1 cut(s) 723
AccIII TCCGGA 1 cut(s) 1616
AciI CCGC 2 cut(s) 723, 1660
AclWI GGATC 3 cut(s) 310, 1388, 1714
AcsI RAATTY 3 cut(s) 540, 550, 1561
AcuI CTGAAG 2 cut(s) 975, 1680
AfaI GTAC 4 cut(s) 496, 849, 914, 1189
AfeI AGCGCT 1 cut(s) 335
AfiI CCNNNNNNNGG 5 cut(s) 131, 572, 620, 857, 1468
AflII CTTAAG 1 cut(s) 764
AflIII ACRYGT 2 cut(s) 107, 215
AgsI TTSAA 7 cut(s) 131, 342, 635, 815, 1405, 1676, 1734
AhlI ACTAGT 1 cut(s) 269
AjiI CACGTC 1 cut(s) 108
AjnI CCWGG 3 cut(s) 565, 619, 1787
AleI CACNNNNGTG 1 cut(s) 1633
Alw21I GWGCWC 1 cut(s) 443
Alw26I GTCTC 4 cut(s) 68, 527, 1154, 1602
Alw44I GTGCAC 1 cut(s) 439
AlwI GGATC 3 cut(s) 310, 1388, 1714
Ama87I CYCGRG 1 cut(s) 981
Aor13HI TCCGGA 1 cut(s) 1616
Aor51HI AGCGCT 1 cut(s) 335
AoxI GGCC 2 cut(s) 235, 779
ApaLI GTGCAC 1 cut(s) 439
ApeKI GCWGC 6 cut(s) 251, 314, 576, 1004, 1034, 1037
ApoI RAATTY 3 cut(s) 540, 550, 1561
Asp700I GAANNNNTTC 1 cut(s) 1624
Asp718I GGTACC 2 cut(s) 494, 847
AspLEI GCGC 2 cut(s) 336, 762
AspS9I GGNCC 3 cut(s) 611, 779, 1471
AsuHPI GGTGA 2 cut(s) 440, 609
AsuII TTCGAA 2 cut(s) 326, 870
AvaI CYCGRG 1 cut(s) 981
AvaII GGWCC 2 cut(s) 611, 1471
BaeGI GKGCMC 1 cut(s) 443
BaeI ACNNNNGTAYC 2 cut(s) 478, 511
BanI GGYRCC 2 cut(s) 494, 847
BanII GRGCYC 1 cut(s) 1788
BarI GAAGNNNNNNTAC 2 cut(s) 1672, 1704
Bbv12I GWGCWC 1 cut(s) 443
BbvCI CCTCAGC 1 cut(s) 1593
BbvI GCAGC 6 cut(s) 263, 326, 563, 991, 1024, 1046
BccI CCATC 6 cut(s) 65, 251, 566, 731, 941, 1139
BcgI CGANNNNNNTGC 2 cut(s) 306, 340
BciT130I CCWGG 3 cut(s) 567, 621, 1789
BcoDI GTCTC 4 cut(s) 68, 527, 1154, 1602
BcuI ACTAGT 1 cut(s) 269
BfaI CTAG 8 cut(s) 152, 270, 1155, 1164, 1322, 1482, 1649, 1740
BfoI RGCGCY 2 cut(s) 337, 763
BfrI CTTAAG 1 cut(s) 764
BglI GCCNNNNNGGC 1 cut(s) 410
BglII AGATCT 1 cut(s) 1535
BisI GCNGC 6 cut(s) 252, 315, 577, 1005, 1035, 1038
BlsI GCNGC 6 cut(s) 253, 316, 578, 1006, 1036, 1039
Bme1390I CCNGG 3 cut(s) 567, 621, 1789
Bme18I GGWCC 2 cut(s) 611, 1471
BmeT110I CYCGRG 1 cut(s) 981
BmgBI CACGTC 1 cut(s) 108
BmgT120I GGNCC 3 cut(s) 611, 779, 1471
BmiI GGNNCC 3 cut(s) 496, 849, 1473
BmrFI CCNGG 3 cut(s) 567, 621, 1789
BmsI GCATC 6 cut(s) 179, 217, 301, 1021, 1169, 1241
BplI GAGNNNNNCTC 4 cut(s) 133, 165, 1221, 1253
BpmI CTGGAG 2 cut(s) 642, 1155
Bpu10I CCTNAGC 2 cut(s) 1593, 1601
Bpu14I TTCGAA 2 cut(s) 326, 870
BpuEI CTTGAG 3 cut(s) 551, 1223, 1295
BsaBI GATNNNNATC 1 cut(s) 684
BsaI GGTCTC 2 cut(s) 527, 1154
BsaJI CCNNGG 4 cut(s) 405, 877, 1666, 1787
BsaWI WCCGGW 3 cut(s) 138, 1207, 1616
BsaXI ACNNNNNCTCC 2 cut(s) 1735, 1765
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 572, 620, 857, 1468
Bse1I ACTGG 1 cut(s) 1291
Bse8I GATNNNNATC 1 cut(s) 684
BseAI TCCGGA 1 cut(s) 1616
BseBI CCWGG 3 cut(s) 567, 621, 1789
BseDI CCNNGG 4 cut(s) 405, 877, 1666, 1787
BseGI GGATG 4 cut(s) 170, 196, 952, 1093
BseJI GATNNNNATC 1 cut(s) 684
BseLI CCNNNNNNNGG 5 cut(s) 131, 572, 620, 857, 1468
BseMII CTCAG 6 cut(s) 785, 798, 882, 923, 1584, 1773
BseNI ACTGG 1 cut(s) 1291
BseRI GAGGAG 1 cut(s) 1610
BseSI GKGCMC 1 cut(s) 443
BseXI GCAGC 6 cut(s) 263, 326, 563, 991, 1024, 1046
BsgI GTGCAG 1 cut(s) 277
Bsh1236I CGCG 1 cut(s) 723
BshFI GGCC 2 cut(s) 237, 781
BshNI GGYRCC 2 cut(s) 494, 847
BsiHKAI GWGCWC 1 cut(s) 443
BsiHKCI CYCGRG 1 cut(s) 981
BsiSI CCGG 3 cut(s) 139, 1208, 1617
BslFI GGGAC 1 cut(s) 446
BslI CCNNNNNNNGG 5 cut(s) 131, 572, 620, 857, 1468
BsmAI GTCTC 4 cut(s) 68, 527, 1154, 1602
BsmFI GGGAC 1 cut(s) 446
BsmI GAATGC 2 cut(s) 1185, 1463
BsnI GGCC 2 cut(s) 237, 781
Bso31I GGTCTC 2 cut(s) 527, 1154
BsoBI CYCGRG 1 cut(s) 981
Bsp119I TTCGAA 2 cut(s) 326, 870
Bsp1286I GDGCHC 2 cut(s) 443, 1788
Bsp13I TCCGGA 1 cut(s) 1616
Bsp143I GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
Bsp19I CCATGG 1 cut(s) 877
BspACI CCGC 2 cut(s) 723, 1660
BspANI GGCC 2 cut(s) 237, 781
BspCNI CTCAG 6 cut(s) 784, 799, 883, 924, 1585, 1774
BspEI TCCGGA 1 cut(s) 1616
BspFNI CGCG 1 cut(s) 723
BspLI GGNNCC 3 cut(s) 496, 849, 1473
BspPI GGATC 3 cut(s) 310, 1388, 1714
BspQI GCTCTTC 2 cut(s) 343, 1222
BspT104I TTCGAA 2 cut(s) 326, 870
BspT107I GGYRCC 2 cut(s) 494, 847
BspTI CTTAAG 1 cut(s) 764
BspTNI GGTCTC 2 cut(s) 527, 1154
BsrI ACTGG 1 cut(s) 1291
BssECI CCNNGG 4 cut(s) 405, 877, 1666, 1787
BssMI GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
BssT1I CCWWGG 1 cut(s) 877
Bst2UI CCWGG 3 cut(s) 567, 621, 1789
Bst4CI ACNGT 5 cut(s) 164, 445, 491, 819, 1771
Bst6I CTCTTC 2 cut(s) 343, 1222
BstAFI CTTAAG 1 cut(s) 764
BstAPI GCANNNNNTGC 1 cut(s) 576
BstBI TTCGAA 2 cut(s) 326, 870
BstC8I GCNNGC 4 cut(s) 286, 1101, 1553, 1752
BstDEI CTNAG 8 cut(s) 771, 807, 891, 932, 1447, 1593, 1601, 1782
BstDSI CCRYGG 1 cut(s) 877
BstEII GGTNACC 1 cut(s) 926
BstF5I GGATG 4 cut(s) 170, 196, 952, 1093
BstFNI CGCG 1 cut(s) 723
BstH2I RGCGCY 2 cut(s) 337, 763
BstHHI GCGC 2 cut(s) 336, 762
BstKTI GATC 6 cut(s) 305, 1117, 1310, 1396, 1538, 1722
BstMAI GTCTC 4 cut(s) 68, 527, 1154, 1602
BstMBI GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
BstMWI GCNNNNNNNGC 7 cut(s) 342, 401, 410, 576, 1001, 1448, 1668
BstNI CCWGG 3 cut(s) 567, 621, 1789
BstNSI RCATGY 3 cut(s) 219, 417, 1555
BstPI GGTNACC 1 cut(s) 926
BstSCI CCNGG 3 cut(s) 565, 619, 1787
BstSLI GKGCMC 1 cut(s) 443
BstUI CGCG 1 cut(s) 723
BstV1I GCAGC 6 cut(s) 263, 326, 563, 991, 1024, 1046
BstX2I RGATCY 2 cut(s) 302, 1535
BstYI RGATCY 2 cut(s) 302, 1535
BsuRI GGCC 2 cut(s) 237, 781
BtgI CCRYGG 1 cut(s) 877
BtrI CACGTC 1 cut(s) 108
BtsCI GGATG 4 cut(s) 170, 196, 952, 1093
BtsI GCAGTG 1 cut(s) 1640
BtsIMutI CAGTG 5 cut(s) 441, 496, 1284, 1640, 1776
Cac8I GCNNGC 4 cut(s) 286, 1101, 1553, 1752
CfoI GCGC 2 cut(s) 336, 762
Cfr13I GGNCC 3 cut(s) 611, 779, 1471
Csp6I GTAC 4 cut(s) 495, 848, 913, 1188
CviAII CATG 9 cut(s) 216, 414, 842, 878, 916, 967, 1028, 1552, 1576
CviQI GTAC 4 cut(s) 495, 848, 913, 1188
DdeI CTNAG 8 cut(s) 771, 807, 891, 932, 1447, 1593, 1601, 1782
DpnI GATC 6 cut(s) 304, 1116, 1309, 1395, 1537, 1721
DpnII GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
Eam1104I CTCTTC 2 cut(s) 343, 1222
EarI CTCTTC 2 cut(s) 343, 1222
Eco130I CCWWGG 1 cut(s) 877
Eco24I GRGCYC 1 cut(s) 1788
Eco31I GGTCTC 2 cut(s) 527, 1154
Eco47I GGWCC 2 cut(s) 611, 1471
Eco47III AGCGCT 1 cut(s) 335
Eco57I CTGAAG 2 cut(s) 975, 1680
Eco88I CYCGRG 1 cut(s) 981
Eco91I GGTNACC 1 cut(s) 926
EcoO109I RGGNCCY 2 cut(s) 611, 779
EcoO65I GGTNACC 1 cut(s) 926
EcoRII CCWGG 3 cut(s) 565, 619, 1787
EcoT14I CCWWGG 1 cut(s) 877
EcoT38I GRGCYC 1 cut(s) 1788
ErhI CCWWGG 1 cut(s) 877
FaeI CATG 9 cut(s) 219, 417, 845, 881, 919, 970, 1031, 1555, 1579
FalI AAGNNNNNCTT 2 cut(s) 1317, 1349
FaqI GGGAC 1 cut(s) 446
FatI CATG 9 cut(s) 215, 413, 841, 877, 915, 966, 1027, 1551, 1575
Fnu4HI GCNGC 6 cut(s) 252, 315, 577, 1005, 1035, 1038
FokI GGATG 4 cut(s) 157, 203, 959, 1100
FriOI GRGCYC 1 cut(s) 1788
Fsp4HI GCNGC 6 cut(s) 252, 315, 577, 1005, 1035, 1038
FspBI CTAG 8 cut(s) 152, 270, 1155, 1164, 1322, 1482, 1649, 1740
GlaI GCGC 2 cut(s) 335, 761
GluI GCNGC 6 cut(s) 252, 315, 577, 1005, 1035, 1038
GsuI CTGGAG 2 cut(s) 642, 1155
HaeII RGCGCY 2 cut(s) 337, 763
HaeIII GGCC 2 cut(s) 237, 781
HapII CCGG 3 cut(s) 139, 1208, 1617
HhaI GCGC 2 cut(s) 336, 762
Hin1II CATG 9 cut(s) 219, 417, 845, 881, 919, 970, 1031, 1555, 1579
Hin6I GCGC 2 cut(s) 334, 760
HinP1I GCGC 2 cut(s) 334, 760
HincII GTYRAC 1 cut(s) 728
HindII GTYRAC 1 cut(s) 728
HinfI GANTC 8 cut(s) 52, 155, 320, 680, 769, 791, 1478, 1796
HpaII CCGG 3 cut(s) 139, 1208, 1617
HphI GGTGA 2 cut(s) 440, 609
Hpy166II GTNNAC 6 cut(s) 441, 448, 728, 1628, 1640, 1774
Hpy188I TCNGA 7 cut(s) 469, 679, 774, 955, 1246, 1699, 1759
Hpy8I GTNNAC 6 cut(s) 441, 448, 728, 1628, 1640, 1774
HpyAV CCTTC 4 cut(s) 248, 423, 624, 950
HpyCH4III ACNGT 5 cut(s) 164, 445, 491, 819, 1771
HpyCH4IV ACGT 2 cut(s) 107, 1248
HpyF10VI GCNNNNNNNGC 7 cut(s) 342, 401, 410, 576, 1001, 1448, 1668
HpyF3I CTNAG 8 cut(s) 771, 807, 891, 932, 1447, 1593, 1601, 1782
HpySE526I ACGT 2 cut(s) 107, 1248
Hsp92II CATG 9 cut(s) 219, 417, 845, 881, 919, 970, 1031, 1555, 1579
HspAI GCGC 2 cut(s) 334, 760
Kpn2I TCCGGA 1 cut(s) 1616
KpnI GGTACC 2 cut(s) 498, 851
Kzo9I GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
LguI GCTCTTC 2 cut(s) 343, 1222
LmnI GCTCC 6 cut(s) 141, 623, 649, 1001, 1045, 1597
Lsp1109I GCAGC 6 cut(s) 263, 326, 563, 991, 1024, 1046
LweI GCATC 6 cut(s) 179, 217, 301, 1021, 1169, 1241
MaeI CTAG 8 cut(s) 152, 270, 1155, 1164, 1322, 1482, 1649, 1740
MaeII ACGT 2 cut(s) 107, 1248
MaeIII GTNAC 3 cut(s) 94, 416, 926
MalI GATC 6 cut(s) 304, 1116, 1309, 1395, 1537, 1721
MboI GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
MfeI CAATTG 2 cut(s) 990, 1218
MflI RGATCY 2 cut(s) 302, 1535
MhlI GDGCHC 2 cut(s) 443, 1788
MlyI GAGTC 2 cut(s) 763, 1805
MmeI TCCRAC 1 cut(s) 1204
MroI TCCGGA 1 cut(s) 1616
MroXI GAANNNNTTC 1 cut(s) 1624
MseI TTAA 6 cut(s) 503, 756, 765, 803, 1136, 1584
MslI CAYNNNNRTG 4 cut(s) 220, 840, 1059, 1633
MspA1I CMGCKG 2 cut(s) 254, 1037
MspCI CTTAAG 1 cut(s) 764
MspI CCGG 3 cut(s) 139, 1208, 1617
MspR9I CCNGG 3 cut(s) 567, 621, 1789
MunI CAATTG 2 cut(s) 990, 1218
Mva1269I GAATGC 2 cut(s) 1185, 1463
MvaI CCWGG 3 cut(s) 567, 621, 1789
MvnI CGCG 1 cut(s) 723
MwoI GCNNNNNNNGC 7 cut(s) 342, 401, 410, 576, 1001, 1448, 1668
NcoI CCATGG 1 cut(s) 877
NdeII GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
NlaIII CATG 9 cut(s) 219, 417, 845, 881, 919, 970, 1031, 1555, 1579
NlaIV GGNNCC 3 cut(s) 496, 849, 1473
NmeAIII GCCGAG 2 cut(s) 837, 1647
NspI RCATGY 3 cut(s) 219, 417, 1555
NspV TTCGAA 2 cut(s) 326, 870
OliI CACNNNNGTG 1 cut(s) 1633
PaeI GCATGC 1 cut(s) 1555
PaeR7I CTCGAG 1 cut(s) 981
PciI ACATGT 1 cut(s) 215
PciSI GCTCTTC 2 cut(s) 343, 1222
PctI GAATGC 2 cut(s) 1185, 1463
PdmI GAANNNNTTC 1 cut(s) 1624
PfeI GAWTC 6 cut(s) 52, 155, 320, 680, 791, 1478
PkrI GCNGC 6 cut(s) 253, 316, 578, 1006, 1036, 1039
PleI GAGTC 2 cut(s) 763, 1804
PpsI GAGTC 2 cut(s) 763, 1804
PpuMI RGGWCCY 1 cut(s) 611
PscI ACATGT 1 cut(s) 215
PsiI TTATAA 1 cut(s) 38
Psp5II RGGWCCY 1 cut(s) 611
Psp6I CCWGG 3 cut(s) 565, 619, 1787
PspEI GGTNACC 1 cut(s) 926
PspGI CCWGG 3 cut(s) 565, 619, 1787
PspN4I GGNNCC 3 cut(s) 496, 849, 1473
PspPI GGNCC 3 cut(s) 611, 779, 1471
PspPPI RGGWCCY 1 cut(s) 611
PspXI VCTCGAGB 1 cut(s) 981
PsuI RGATCY 2 cut(s) 302, 1535
PvuII CAGCTG 2 cut(s) 254, 1037
RsaI GTAC 4 cut(s) 496, 849, 914, 1189
RsaNI GTAC 4 cut(s) 495, 848, 913, 1188
RseI CAYNNNNRTG 4 cut(s) 220, 840, 1059, 1633
SapI GCTCTTC 2 cut(s) 343, 1222
SaqAI TTAA 6 cut(s) 503, 756, 765, 803, 1136, 1584
SatI GCNGC 6 cut(s) 252, 315, 577, 1005, 1035, 1038
Sau3AI GATC 6 cut(s) 302, 1114, 1307, 1393, 1535, 1719
Sau96I GGNCC 3 cut(s) 611, 779, 1471
SchI GAGTC 2 cut(s) 763, 1805
ScrFI CCNGG 3 cut(s) 567, 621, 1789
SduI GDGCHC 2 cut(s) 443, 1788
SfaNI GCATC 6 cut(s) 179, 217, 301, 1021, 1169, 1241
Sfr274I CTCGAG 1 cut(s) 981
SfuI TTCGAA 2 cut(s) 326, 870
SinI GGWCC 2 cut(s) 611, 1471
SlaI CTCGAG 1 cut(s) 981
SmiMI CAYNNNNRTG 4 cut(s) 220, 840, 1059, 1633
SmlI CTYRAG 5 cut(s) 530, 764, 981, 1238, 1274
SmoI CTYRAG 5 cut(s) 530, 764, 981, 1238, 1274
SpeI ACTAGT 1 cut(s) 269
SphI GCATGC 1 cut(s) 1555
SsiI CCGC 2 cut(s) 723, 1660
SspI AATATT 1 cut(s) 459
SspMI CTAG 8 cut(s) 152, 270, 1155, 1164, 1322, 1482, 1649, 1740
StyD4I CCNGG 3 cut(s) 565, 619, 1787
StyI CCWWGG 1 cut(s) 877
TaaI ACNGT 5 cut(s) 164, 445, 491, 819, 1771
TaiI ACGT 2 cut(s) 110, 1251
TaqI TCGA 8 cut(s) 50, 326, 427, 870, 982, 1354, 1517, 1794
TatI WGTACW 1 cut(s) 912
TfiI GAWTC 6 cut(s) 52, 155, 320, 680, 791, 1478
Tru1I TTAA 6 cut(s) 503, 756, 765, 803, 1136, 1584
Tru9I TTAA 6 cut(s) 503, 756, 765, 803, 1136, 1584
TscAI CASTG 5 cut(s) 448, 496, 1291, 1647, 1776
TseI GCWGC 6 cut(s) 251, 314, 576, 1004, 1034, 1037
TspDTI ATGAA 7 cut(s) 17, 453, 630, 821, 932, 1104, 1779
TspGWI ACGGA 1 cut(s) 114
TspRI CASTG 5 cut(s) 448, 496, 1291, 1647, 1776
Vha464I CTTAAG 1 cut(s) 764
VneI GTGCAC 1 cut(s) 439
VpaK11BI GGWCC 2 cut(s) 611, 1471
XapI RAATTY 3 cut(s) 540, 550, 1561
XbaI TCTAGA 2 cut(s) 151, 1481
XceI RCATGY 3 cut(s) 219, 417, 1555
XhoI CTCGAG 1 cut(s) 981
XmnI GAANNNNTTC 1 cut(s) 1624
XspI CTAG 8 cut(s) 152, 270, 1155, 1164, 1322, 1482, 1649, 1740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.