Rh5BG498200

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
79451090 .. 79455574
4485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG498200.1

Sequence Viewer

Length: 1953 bp
ATGGACTGCTCTTCTGTGGCTTATATCTTTTGCATGGTCATATACCTCACTGACTCTGGATTGGAGAAGATTTTTGAAATAATTGGGTTCGTGTATCAATACATTGAGTTATTGCGTCAAATGTCGCCACAAGAATGGATATTTCGGGAACTTCAGGATATTGGGAACATGGACTTTAGATTTTCAGAGGAGCAGGATCAGGATGATTATGCTTCACAACTTGCAGAAAATTTACTATATTATGCAACAGAGCATGTTATTTATGGGGACTATGTGAACGAGAGTTGGGACCAGGAATTGATAGAATATATTCTTGGTTTCTTCAGACCAGAAAACATGAGGATTGATGTGATATCAAAGTCCTTGTTTAAGTCAGAAGATTTCCAGTGTGAGCCTTGGTTTGGGTCACATTATACTGAGGAAGATGTATCTCCATCTTTAATAAATTTATGGAAGAATCCTCAAGAAATTAGTGTTTCATTGCATCTGCCAGCAAAGAATGATTTCATTCCTCGTGATTTCTCCATCCGTTCTGATGTTTTGTGCATTGATACTGCAACGACATCTTGTCCGAGATGTATACTTGATGAACCATTGATGCAGTTTTGGTACAAGCTCGACAATACATTTAAACTTCCACATGTAAATACATATTTCCGCATCAATCTGAAGGGTGCATGTGATGATGTGAAGAGTTGTGTTTTGACTAGCTTATACCTTGACCTTCTCACAGATCAGCTGAATGAGATCCTCTATGAGGCCTGTGTTGCCAGCCTGGGAACTTCTTTTTCTCTGTCTCTGGACAAACTGCAGTTAGAGGTATGCGGTTTCAATGATAAGCTTCCAGCTCTGTTGTCAAAAATTTTGGAAACAGTAAAAAGTTTCTTGCCAACTGATGATCGTTTTGAGGTTTTTAAAGAAGACATGGAGCGAGCATATACGAACGCCAATATGGATCCTTGGAGTTACTCAACATACTTGAGAGATCAAGTTCTGTTGAAGAAATTCTACACCGTAGATGAGCAGTCACATGTTTTGAAGGGATTGTCTGTTTCTGATCTGAAGTCTTTCATTCCTGAGATTTTTTCCCAGCTATACATTGAGGGCCTTTTGCATGGAAACTTGTCAGAAGAAGAAGCTATTAGTCTTGCAAAATTATTTCAAACAAATTTTACTGTACCACCACTTCCTAGCGAGTTGGTGTATAGAGACAATTGTATCTGTCTTCCTCCAAATGCTAACCTCATTAGAGATGCTACTGTGAAGAACAAGTCAGAAACAAACTCTGTGACTGAGCTGTATTTTCAAATTGAGCAAGCAGTGAAGATTGAGTCCATCAGACTAAAAGTATTGATTGATCTTTTTCATGAAATTGTACAGGAACCACTTTTTAATCAACTAAGGACAAAGGAGCAGCTTGGGTATGTTGTTCTCTGTGGCCAGAATCATACATGCAATGTTTTTGGCTTCTATTTCTGTGTTCAGTCGTCCGAGTACAACCCGATCCACCTTCAAGGCAGACTGGACAACTTTATCGATGGTCTGGAAGAGTTGTTGGAAGGACTGGAAGATGATTCCTTTGAGAATTATAAAGGTGGACTAATGGCAAAGATTCTGGAGAAAGATGCATCCCTCACATGTGAAACCAATCGATTGTGGACTCAGATTCTTGCTAAATGGTACAAGTTTGACTATTCGAAAAAGGCTGCAGAACAACTCAGAAGCATTCAGAAGGAGGATGTTACCAAATTTTACAAGACCTATTTGCAACAATCATCTCCAAAGCGTCGAAGACTTGCAACTCGTGTTTGGGGTTGCAACACAGACTTGAAAGAAGCTGAAGGAGCGCGACCGGAGTCTGTGCAAGTCATTGAAGACCTTGCAGCCTTTAAGATGTCGTCCAAGTTTTATGATCGCAAAAGATGTCAAAAAGTGACTCCTCTAAATAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

650

Amino Acids

75.5

Weight (kDa)

4.8

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16_M PF16187 59 - 342 2.4e-84 Middle or third domain of peptidase_M16
Peptidase_M16_C PF05193 349 - 532 1e-17 Peptidase M16 inactive domain
PqqF-like_C_4 PF22456 454 - 553 5.1e-24 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1590
AccI GTMKAC 1 cut(s) 580
AccII CGCG 1 cut(s) 1849
AciI CCGC 2 cut(s) 658, 825
AclWI GGATC 5 cut(s) 204, 742, 950, 963, 1498
AcoI YGGCCR 1 cut(s) 1438
AcsI RAATTY 6 cut(s) 229, 445, 861, 1004, 1168, 1748
AcuI CTGAAG 5 cut(s) 137, 307, 689, 1082, 1860
AfaI GTAC 5 cut(s) 611, 1179, 1377, 1496, 1682
AfiI CCNNNNNNNGG 2 cut(s) 401, 757
AflIII ACRYGT 3 cut(s) 640, 1030, 1637
AgsI TTSAA 9 cut(s) 77, 832, 1000, 1039, 1163, 1307, 1514, 1831, 1874
AhdI GACNNNNNGTC 1 cut(s) 567
AjnI CCWGG 2 cut(s) 291, 774
AjuI GAANNNNNNNTTGG 2 cut(s) 297, 329
Alw26I GTCTC 2 cut(s) 801, 1203
AlwI GGATC 5 cut(s) 204, 742, 950, 963, 1498
AoxI GGCC 3 cut(s) 759, 1105, 1438
ApeKI GCWGC 3 cut(s) 1414, 1706, 1883
ApoI RAATTY 6 cut(s) 229, 445, 861, 1004, 1168, 1748
Asp700I GAANNNNTTC 4 cut(s) 309, 503, 1004, 1067
AspLEI GCGC 1 cut(s) 1849
AspS9I GGNCC 2 cut(s) 289, 1105
AsuII TTCGAA 1 cut(s) 1697
AvaII GGWCC 1 cut(s) 289
BaeI ACNNNNGTAYC 2 cut(s) 1201, 1234
BalI TGGCCA 1 cut(s) 1440
BamHI GGATCC 1 cut(s) 955
BarI GAAGNNNNNNTAC 4 cut(s) 992, 1024, 1170, 1202
BauI CACGAG 2 cut(s) 513, 1803
BbsI GAAGAC 4 cut(s) 927, 1217, 1798, 1881
BbvI GCAGC 3 cut(s) 1426, 1693, 1895
BccI CCATC 4 cut(s) 442, 533, 1343, 1532
BciT130I CCWGG 2 cut(s) 293, 776
BcoDI GTCTC 2 cut(s) 801, 1203
BfaI CTAG 2 cut(s) 708, 1191
BfmI CTRYAG 2 cut(s) 809, 1707
BisI GCNGC 3 cut(s) 1415, 1707, 1884
BlsI GCNGC 3 cut(s) 1416, 1708, 1885
Bme1390I CCNGG 2 cut(s) 293, 776
Bme18I GGWCC 1 cut(s) 289
BmeRI GACNNNNNGTC 1 cut(s) 567
BmgT120I GGNCC 2 cut(s) 289, 1105
BmiI GGNNCC 3 cut(s) 290, 957, 1383
BmrFI CCNGG 2 cut(s) 293, 776
BmsI GCATC 6 cut(s) 493, 588, 669, 1243, 1615, 1637
BoxI GACNNNNGTC 1 cut(s) 1855
BpiI GAAGAC 4 cut(s) 927, 1217, 1798, 1881
BpmI CTGGAG 1 cut(s) 1637
Bpu14I TTCGAA 1 cut(s) 1697
BpuEI CTTGAG 2 cut(s) 447, 1000
Bsa29I ATCGAT 2 cut(s) 1536, 1651
BsaJI CCNNGG 3 cut(s) 395, 775, 959
BsaWI WCCGGW 1 cut(s) 1852
Bsc4I CCNNNNNNNGG 2 cut(s) 401, 757
Bse1I ACTGG 3 cut(s) 385, 1527, 1569
Bse3DI GCAATG 2 cut(s) 479, 1462
BseBI CCWGG 2 cut(s) 293, 776
BseCI ATCGAT 2 cut(s) 1536, 1651
BseDI CCNNGG 3 cut(s) 395, 775, 959
BseGI GGATG 4 cut(s) 208, 525, 1628, 1744
BseLI CCNNNNNNNGG 2 cut(s) 401, 757
BseMI GCAATG 2 cut(s) 479, 1462
BseMII CTCAG 5 cut(s) 408, 1068, 1284, 1676, 1732
BseNI ACTGG 3 cut(s) 385, 1527, 1569
BseRI GAGGAG 2 cut(s) 203, 1929
BseXI GCAGC 3 cut(s) 1426, 1693, 1895
BseYI CCCAGC 1 cut(s) 1089
Bsh1236I CGCG 1 cut(s) 1849
Bsh1285I CGRYCG 1 cut(s) 1853
BshFI GGCC 3 cut(s) 761, 1107, 1440
BshVI ATCGAT 2 cut(s) 1536, 1651
BsiEI CGRYCG 1 cut(s) 1853
BsiSI CCGG 1 cut(s) 1853
BslFI GGGAC 2 cut(s) 281, 302
BslI CCNNNNNNNGG 2 cut(s) 401, 757
BsmAI GTCTC 2 cut(s) 801, 1203
BsmFI GGGAC 2 cut(s) 281, 302
BsmI GAATGC 1 cut(s) 1725
BsnI GGCC 3 cut(s) 761, 1107, 1440
Bsp119I TTCGAA 1 cut(s) 1697
Bsp1407I TGTACA 1 cut(s) 1375
BspACI CCGC 2 cut(s) 658, 825
BspANI GGCC 3 cut(s) 761, 1107, 1440
BspCNI CTCAG 5 cut(s) 409, 1069, 1285, 1675, 1731
BspDI ATCGAT 2 cut(s) 1536, 1651
BspFNI CGCG 1 cut(s) 1849
BspHI TCATGA 1 cut(s) 1366
BspLI GGNNCC 3 cut(s) 290, 957, 1383
BspMAI CTGCAG 2 cut(s) 813, 1711
BspPI GGATC 5 cut(s) 204, 742, 950, 963, 1498
BspQI GCTCTTC 1 cut(s) 16
BspT104I TTCGAA 1 cut(s) 1697
BsrDI GCAATG 2 cut(s) 479, 1462
BsrGI TGTACA 1 cut(s) 1375
BsrI ACTGG 3 cut(s) 385, 1527, 1569
BssECI CCNNGG 3 cut(s) 395, 775, 959
BssNAI GTATAC 1 cut(s) 581
BssSI CACGAG 2 cut(s) 513, 1803
BssT1I CCWWGG 2 cut(s) 395, 959
Bst1107I GTATAC 1 cut(s) 581
Bst2BI CACGAG 2 cut(s) 513, 1803
Bst2UI CCWGG 2 cut(s) 293, 776
Bst4CI ACNGT 4 cut(s) 874, 1015, 1177, 1261
Bst6I CTCTTC 3 cut(s) 16, 686, 1542
BstAUI TGTACA 1 cut(s) 1375
BstBI TTCGAA 1 cut(s) 1697
BstC8I GCNNGC 4 cut(s) 492, 772, 933, 1317
BstDEI CTNAG 6 cut(s) 417, 1077, 1293, 1400, 1662, 1718
BstENI CCTNNNNNAGG 1 cut(s) 755
BstF5I GGATG 4 cut(s) 208, 525, 1628, 1744
BstFNI CGCG 1 cut(s) 1849
BstHHI GCGC 1 cut(s) 1849
BstMAI GTCTC 2 cut(s) 801, 1203
BstMCI CGRYCG 1 cut(s) 1853
BstMWI GCNNNNNNNGC 2 cut(s) 767, 1844
BstNI CCWGG 2 cut(s) 293, 776
BstNSI RCATGY 6 cut(s) 257, 644, 681, 1034, 1455, 1641
BstPAI GACNNNNGTC 1 cut(s) 1855
BstSCI CCNGG 2 cut(s) 291, 774
BstSFI CTRYAG 2 cut(s) 809, 1707
BstUI CGCG 1 cut(s) 1849
BstV1I GCAGC 3 cut(s) 1426, 1693, 1895
BstV2I GAAGAC 4 cut(s) 927, 1217, 1798, 1881
BstX2I RGATCY 2 cut(s) 747, 955
BstXI CCANNNNNNTGG 1 cut(s) 135
BstYI RGATCY 2 cut(s) 747, 955
BstZ17I GTATAC 1 cut(s) 581
Bsu15I ATCGAT 2 cut(s) 1536, 1651
BsuRI GGCC 3 cut(s) 761, 1107, 1440
BsuTUI ATCGAT 2 cut(s) 1536, 1651
BtsCI GGATG 4 cut(s) 208, 525, 1628, 1744
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 3 cut(s) 48, 392, 1326
Cac8I GCNNGC 4 cut(s) 492, 772, 933, 1317
CciI TCATGA 1 cut(s) 1366
CfoI GCGC 1 cut(s) 1849
Cfr13I GGNCC 2 cut(s) 289, 1105
ClaI ATCGAT 2 cut(s) 1536, 1651
CseI GACGC 2 cut(s) 104, 1775
Csp6I GTAC 5 cut(s) 610, 1178, 1376, 1495, 1681
CviQI GTAC 5 cut(s) 610, 1178, 1376, 1495, 1681
DdeI CTNAG 6 cut(s) 417, 1077, 1293, 1400, 1662, 1718
DraI TTTAAA 2 cut(s) 631, 916
DriI GACNNNNNGTC 1 cut(s) 567
EaeI YGGCCR 1 cut(s) 1438
Eam1104I CTCTTC 3 cut(s) 16, 686, 1542
Eam1105I GACNNNNNGTC 1 cut(s) 567
EarI CTCTTC 3 cut(s) 16, 686, 1542
Eco130I CCWWGG 2 cut(s) 395, 959
Eco147I AGGCCT 1 cut(s) 761
Eco32I GATATC 1 cut(s) 354
Eco47I GGWCC 1 cut(s) 289
Eco57I CTGAAG 5 cut(s) 137, 307, 689, 1082, 1860
EcoNI CCTNNNNNAGG 1 cut(s) 755
EcoO109I RGGNCCY 1 cut(s) 1105
EcoRII CCWGG 2 cut(s) 291, 774
EcoRV GATATC 1 cut(s) 354
EcoT14I CCWWGG 2 cut(s) 395, 959
EcoT22I ATGCAT 1 cut(s) 1630
ErhI CCWWGG 2 cut(s) 395, 959
FaqI GGGAC 2 cut(s) 281, 302
FblI GTMKAC 1 cut(s) 580
Fnu4HI GCNGC 3 cut(s) 1415, 1707, 1884
FokI GGATG 4 cut(s) 215, 512, 1615, 1751
Fsp4HI GCNGC 3 cut(s) 1415, 1707, 1884
FspBI CTAG 2 cut(s) 708, 1191
GlaI GCGC 1 cut(s) 1848
GluI GCNGC 3 cut(s) 1415, 1707, 1884
GsaI CCCAGC 1 cut(s) 1093
GsuI CTGGAG 1 cut(s) 1637
HaeIII GGCC 3 cut(s) 761, 1107, 1440
HapII CCGG 1 cut(s) 1853
HgaI GACGC 2 cut(s) 104, 1775
HhaI GCGC 1 cut(s) 1849
Hin6I GCGC 1 cut(s) 1847
HinP1I GCGC 1 cut(s) 1847
HindIII AAGCTT 1 cut(s) 839
HpaII CCGG 1 cut(s) 1853
Hpy166II GTNNAC 4 cut(s) 277, 581, 1598, 1659
Hpy8I GTNNAC 4 cut(s) 277, 581, 1598, 1659
Hpy99I CGWCG 1 cut(s) 1791
HpyAV CCTTC 7 cut(s) 664, 734, 1033, 1520, 1553, 1726, 1835
HpyCH4III ACNGT 4 cut(s) 874, 1015, 1177, 1261
HpyF10VI GCNNNNNNNGC 2 cut(s) 767, 1844
HpyF3I CTNAG 6 cut(s) 417, 1077, 1293, 1400, 1662, 1718
HspAI GCGC 1 cut(s) 1847
LguI GCTCTTC 1 cut(s) 16
LmnI GCTCC 4 cut(s) 190, 928, 1411, 1844
Lsp1109I GCAGC 3 cut(s) 1426, 1693, 1895
LweI GCATC 6 cut(s) 493, 588, 669, 1243, 1615, 1637
MaeI CTAG 2 cut(s) 708, 1191
MaeIII GTNAC 6 cut(s) 405, 965, 1026, 1288, 1741, 1933
MfeI CAATTG 1 cut(s) 1213
MflI RGATCY 2 cut(s) 747, 955
MlsI TGGCCA 1 cut(s) 1440
MluNI TGGCCA 1 cut(s) 1440
MlyI GAGTC 5 cut(s) 47, 1340, 1654, 1865, 1930
MmeI TCCRAC 1 cut(s) 1536
Mox20I TGGCCA 1 cut(s) 1440
Mph1103I ATGCAT 1 cut(s) 1630
MroXI GAANNNNTTC 4 cut(s) 309, 503, 1004, 1067
MscI TGGCCA 1 cut(s) 1440
MseI TTAA 6 cut(s) 369, 440, 630, 915, 1392, 1890
MslI CAYNNNNRTG 1 cut(s) 133
Msp20I TGGCCA 1 cut(s) 1440
MspA1I CMGCKG 1 cut(s) 739
MspI CCGG 1 cut(s) 1853
MspR9I CCNGG 2 cut(s) 293, 776
MunI CAATTG 1 cut(s) 1213
Mva1269I GAATGC 1 cut(s) 1725
MvaI CCWGG 2 cut(s) 293, 776
MvnI CGCG 1 cut(s) 1849
MwoI GCNNNNNNNGC 2 cut(s) 767, 1844
NlaIV GGNNCC 3 cut(s) 290, 957, 1383
NmuCI GTSAC 4 cut(s) 405, 1026, 1288, 1933
NsiI ATGCAT 1 cut(s) 1630
NspI RCATGY 6 cut(s) 257, 644, 681, 1034, 1455, 1641
NspV TTCGAA 1 cut(s) 1697
PagI TCATGA 1 cut(s) 1366
PceI AGGCCT 1 cut(s) 761
PciI ACATGT 3 cut(s) 640, 1030, 1637
PciSI GCTCTTC 1 cut(s) 16
PctI GAATGC 1 cut(s) 1725
PdmI GAANNNNTTC 4 cut(s) 309, 503, 1004, 1067
PfeI GAWTC 5 cut(s) 457, 1444, 1574, 1612, 1666
PkrI GCNGC 3 cut(s) 1416, 1708, 1885
PleI GAGTC 5 cut(s) 47, 1339, 1654, 1864, 1930
PpsI GAGTC 5 cut(s) 47, 1339, 1654, 1864, 1930
PscI ACATGT 3 cut(s) 640, 1030, 1637
PshAI GACNNNNGTC 1 cut(s) 1855
PsiI TTATAA 1 cut(s) 1590
Psp6I CCWGG 2 cut(s) 291, 774
PspFI CCCAGC 1 cut(s) 1089
PspGI CCWGG 2 cut(s) 291, 774
PspN4I GGNNCC 3 cut(s) 290, 957, 1383
PspPI GGNCC 2 cut(s) 289, 1105
PstI CTGCAG 2 cut(s) 813, 1711
PsuI RGATCY 2 cut(s) 747, 955
PvuII CAGCTG 1 cut(s) 739
RsaI GTAC 5 cut(s) 611, 1179, 1377, 1496, 1682
RsaNI GTAC 5 cut(s) 610, 1178, 1376, 1495, 1681
RseI CAYNNNNRTG 1 cut(s) 133
SapI GCTCTTC 1 cut(s) 16
SaqAI TTAA 6 cut(s) 369, 440, 630, 915, 1392, 1890
SatI GCNGC 3 cut(s) 1415, 1707, 1884
Sau96I GGNCC 2 cut(s) 289, 1105
SchI GAGTC 5 cut(s) 47, 1340, 1654, 1865, 1930
ScrFI CCNGG 2 cut(s) 293, 776
SfaNI GCATC 6 cut(s) 493, 588, 669, 1243, 1615, 1637
SfcI CTRYAG 2 cut(s) 809, 1707
SfuI TTCGAA 1 cut(s) 1697
SinI GGWCC 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 133
SmlI CTYRAG 2 cut(s) 462, 979
SmoI CTYRAG 2 cut(s) 462, 979
SseBI AGGCCT 1 cut(s) 761
SsiI CCGC 2 cut(s) 658, 825
SspMI CTAG 2 cut(s) 708, 1191
StuI AGGCCT 1 cut(s) 761
StyD4I CCNGG 2 cut(s) 291, 774
StyI CCWWGG 2 cut(s) 395, 959
TaaI ACNGT 4 cut(s) 874, 1015, 1177, 1261
TaqI TCGA 5 cut(s) 618, 1536, 1651, 1697, 1789
TatI WGTACW 2 cut(s) 1375, 1494
TfiI GAWTC 5 cut(s) 457, 1444, 1574, 1612, 1666
Tru1I TTAA 6 cut(s) 369, 440, 630, 915, 1392, 1890
Tru9I TTAA 6 cut(s) 369, 440, 630, 915, 1392, 1890
TscAI CASTG 3 cut(s) 55, 392, 1326
TseFI GTSAC 4 cut(s) 405, 1026, 1288, 1933
TseI GCWGC 3 cut(s) 1414, 1706, 1883
Tsp45I GTSAC 4 cut(s) 405, 1026, 1288, 1933
TspDTI ATGAA 6 cut(s) 468, 496, 603, 1060, 1355, 1383
TspGWI ACGGA 1 cut(s) 518
TspRI CASTG 3 cut(s) 55, 392, 1326
VpaK11BI GGWCC 1 cut(s) 289
XagI CCTNNNNNAGG 1 cut(s) 755
XapI RAATTY 6 cut(s) 229, 445, 861, 1004, 1168, 1748
XceI RCATGY 6 cut(s) 257, 644, 681, 1034, 1455, 1641
XmiI GTMKAC 1 cut(s) 580
XmnI GAANNNNTTC 4 cut(s) 309, 503, 1004, 1067
XspI CTAG 2 cut(s) 708, 1191
Zsp2I ATGCAT 1 cut(s) 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.