Rmu_sc0005592.1_g000032

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005592.1
OG0000183
Physical Location & Seq
Forward (+)
110604 .. 118340
7737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005592.1_g000032.1.cds

Sequence Viewer

Length: 3060 bp
atgggtgtgatgggttgctgcactttctcgtcggacgacattgtaataaagtctcctaatgacaaacgactctacagagtgattaagcttgagaatggccttactgcattgctcattcacgatcctcaggtctacccacaaggaccaccccaccactcctccgaccttgaacaacaacaacaagatagtgaagctgtagaagaagaagaagaaaaggaagaggaaggtgaagttaagaggaaggaagagggaggtgcttctgagactaagaaggcagcagcagcaatgtgtgtcggaataggcagcttctctgaccctctcgaggctcaggggcttgcacattttctagaacacatgctgttcatggggagtacaaagttcccagatgaaaatgagtatgctagttacttgtccaagcatggagggtcgtcaaatgcatatacaggagcagaacatacttgctactactttaatgtgaaacaagaatttcttatgggtgccttgaaaagattttctcagttctttgtttcacctctaatgaaaagtgaagccatggagagagaggtacaggctatagattcagagtttaaaacggttctgcaaaacgatttctgccgccttcgacaacttcagggccatacatcctcacctggtcacccatttaataaattctcttggggaaataagaagagcttggatgatgcaaaggaaaaagggataaaattgcaggaacgaatactaaaattgtacagagactattaccacggtggattaatgaagctagttgtcattggtggagaatctcttgatgtacttgaggactgggttttggaattgtttggagatgtcaaaaaaggtccccaagtaaatctggagttcaaggcagaaggtcctatttggaaagctggaaaactttacaggctagaggctgttgatgatgttcatatactccacctagcatggacacttccatgtcttcaagaacactatttgaagaaaccagaagattacttgagtcatctgcttgggcatgagggcaggggaagtttgcatttctacctgaaagctagagggtgggtaacatctttagatacttgtttgagcgggatggactgctcttctgtggcttatatcttttgcatggtcatatacctcactgactctggattggagaagatttttgaaataattgggttcgtgtatcaatacattgagttattgcgtcaaatgtcgccacaagaatggatatttcgggaacttcaggatattgggaacatggactttagattttcagaggagcaggatcaggatgattatgcttcacaacttgcagaaaatttactatattatgcaacagagcatgttatttatggggactatgtgaacgagagttgggaccaggaattgatagaatatattcttggtttcttcagaccagaaaacatgaggattgatgtgatatcaaagtccttgtttaagtcagaagatttccagtgtgagccttggtttgggtcacattatactgaggaatatgtatctccatctttaataaatttatggaagaatcctcaagaaattagtgtttcattgcatctgccagcaaagaatgatttcattcctcgtgatttctccatccgttctgatgttttgtgcattgatactgcaacgacatcttgtccgagatgtatacttgatgaaccattgatgcagttttggtacaagctcgacaatacatttaaacttccacatgtaaatacatatttccgcatcaatctgaagggtgcatgtgatgatgtgaagagttgtgttttgactagcttataccttgaccttctcacagatcagctgaatgagatcctctatgaggcctgtgttgccagcctgggaacttctttttctctgtctctggacaaactgcagttagaggtatgcggtttcaatgataagcttccagctctgttgtcaaaaattttggaaacagtaaaaagtttcttgccaactgatgatcgttttgaggtttttaaagaagacatggagcgagcatatacgaacgccaatatggatccttggagttactcaacatacttgagagatcaagttctgttgaagaaattctacaccgtagatgagcagtcacatgttttgaagggattgtctgtttctgatctgaagtctttcattcctgagattttttcccagctatacattgagggccttttgcatggaaacttgtcagaagaagaagctattagtcttgcaaaattatttcaaacaaattttactgtaccaccacttcctagcgagttggtgtatagagacaattgtatctgtcttcctccaaatgctaacctcattagagatgctactgtgaagaacaagtcagaaacaaactctgtgactgagctgtattttcaaattgagcaagcagtgaagattgagtccatcagactaaaagtattgattgatctttttcatgaaattgtacaggaaccactttttaatcaactaaggacaaaggagcagcttgggtatgttgttctctgtggccagaatcatacatgcaatgtttttggcttctatttctgtgttcagtcgtccgagtacaacccgatccaccttcaaggcagactggacaactttatcgatggtctggaagagttgttggaaggactggaagatgattcctttgagaattataaaggtggactaatggcaaagattctggagaaagatgcatccctcacatgtgaaaccaatcgattgtggactcagattcttgctaaatggtacaagtttgactattcgaaaaaggctgcagaacaactcagaagcattcagaaggaggatgttaccaaattttacaagacctatttgcaacaatcatctccaaagcgtcgaagacttgcaactcgtgtttggggttgcaacacagacttgaaagaagctgaagaagcgcgaccggagtctgtgcaagtcattgaagaccttgcagcctttaagatgtcgtccaagttttatgatcgcaaaagatgtcaaaaagtgactcctctaaatagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

1019

Amino Acids

117.3

Weight (kDa)

5.06

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2697
AccB1I GGYRCC 1 cut(s) 497
AccBSI CCGCTC 1 cut(s) 1104
AccI GTMKAC 2 cut(s) 132, 1687
AccII CGCG 1 cut(s) 2956
AciI CCGC 4 cut(s) 616, 1104, 1765, 1932
AclWI GGATC 6 cut(s) 116, 1311, 1849, 2057, 2070, 2605
AcoI YGGCCR 1 cut(s) 2545
AcsI RAATTY 8 cut(s) 485, 668, 1336, 1552, 1968, 2111, 2275, 2855
AcuI CTGAAG 6 cut(s) 614, 1244, 1414, 1796, 2189, 2967
AfaI GTAC 9 cut(s) 373, 567, 749, 813, 1718, 2286, 2484, 2603, 2789
AfiI CCNNNNNNNGG 3 cut(s) 322, 1508, 1864
AflIII ACRYGT 3 cut(s) 1747, 2137, 2744
AhdI GACNNNNNGTC 1 cut(s) 1674
AjnI CCWGG 3 cut(s) 649, 1398, 1881
AjuI GAANNNNNNNTTGG 2 cut(s) 1404, 1436
Alw26I GTCTC 5 cut(s) 57, 257, 747, 1908, 2310
AlwI GGATC 6 cut(s) 116, 1311, 1849, 2057, 2070, 2605
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 5 cut(s) 97, 634, 1866, 2212, 2545
ApeKI GCWGC 8 cut(s) 18, 275, 278, 281, 303, 2521, 2813, 2990
ApoI RAATTY 8 cut(s) 485, 668, 1336, 1552, 1968, 2111, 2275, 2855
AseI ATTAAT 1 cut(s) 773
Asp700I GAANNNNTTC 4 cut(s) 1416, 1610, 2111, 2174
AspLEI GCGC 1 cut(s) 2956
AspS9I GGNCC 6 cut(s) 143, 634, 857, 890, 1396, 2212
AsuHPI GGTGA 4 cut(s) 239, 522, 639, 647
AsuII TTCGAA 1 cut(s) 2804
AvaI CYCGRG 1 cut(s) 320
AvaII GGWCC 4 cut(s) 143, 857, 890, 1396
AxyI CCTNAGG 1 cut(s) 126
BaeI ACNNNNGTAYC 2 cut(s) 2308, 2341
BalI TGGCCA 1 cut(s) 2547
BamHI GGATCC 1 cut(s) 2062
BanI GGYRCC 1 cut(s) 497
BarI GAAGNNNNNNTAC 4 cut(s) 2099, 2131, 2277, 2309
BauI CACGAG 2 cut(s) 1620, 2910
BbsI GAAGAC 5 cut(s) 968, 2034, 2324, 2905, 2988
BbvI GCAGC 8 cut(s) 5, 287, 290, 293, 315, 2533, 2800, 3002
BccI CCATC 6 cut(s) 4, 1102, 1549, 1640, 2450, 2639
BciT130I CCWGG 3 cut(s) 651, 1400, 1883
BcoDI GTCTC 5 cut(s) 57, 257, 747, 1908, 2310
BfaI CTAG 8 cut(s) 347, 402, 782, 923, 956, 1068, 1815, 2298
BfmI CTRYAG 5 cut(s) 73, 195, 573, 1916, 2814
BisI GCNGC 9 cut(s) 19, 276, 279, 282, 304, 616, 2522, 2814, 2991
BlsI GCNGC 9 cut(s) 20, 277, 280, 283, 305, 617, 2523, 2815, 2992
Bme1390I CCNGG 3 cut(s) 651, 1400, 1883
Bme18I GGWCC 4 cut(s) 143, 857, 890, 1396
BmeRI GACNNNNNGTC 1 cut(s) 1674
BmeT110I CYCGRG 1 cut(s) 320
BmgT120I GGNCC 6 cut(s) 143, 634, 857, 890, 1396, 2212
BmiI GGNNCC 5 cut(s) 499, 859, 1397, 2064, 2490
BmrFI CCNGG 3 cut(s) 651, 1400, 1883
BmrI ACTGGG 1 cut(s) 832
BmsI GCATC 7 cut(s) 691, 1600, 1695, 1776, 2350, 2722, 2744
BmuI ACTGGG 1 cut(s) 832
BoxI GACNNNNGTC 1 cut(s) 2962
BpiI GAAGAC 5 cut(s) 968, 2034, 2324, 2905, 2988
BpmI CTGGAG 2 cut(s) 893, 2744
Bpu10I CCTNAGC 1 cut(s) 327
Bpu14I TTCGAA 1 cut(s) 2804
BpuEI CTTGAG 5 cut(s) 110, 836, 1033, 1554, 2107
Bsa29I ATCGAT 2 cut(s) 2643, 2758
BsaJI CCNNGG 5 cut(s) 552, 763, 1502, 1882, 2066
BsaWI WCCGGW 1 cut(s) 2959
BsaXI ACNNNNNCTCC 2 cut(s) 143, 173
Bsc4I CCNNNNNNNGG 3 cut(s) 322, 1508, 1864
Bse1I ACTGG 4 cut(s) 827, 1492, 2634, 2676
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 4 cut(s) 107, 291, 1586, 2569
BseBI CCWGG 3 cut(s) 651, 1400, 1883
BseCI ATCGAT 2 cut(s) 2643, 2758
BseDI CCNNGG 5 cut(s) 552, 763, 1502, 1882, 2066
BseGI GGATG 7 cut(s) 641, 703, 1113, 1315, 1632, 2735, 2851
BseLI CCNNNNNNNGG 3 cut(s) 322, 1508, 1864
BseMI GCAATG 4 cut(s) 107, 291, 1586, 2569
BseMII CTCAG 9 cut(s) 140, 252, 341, 530, 1515, 2175, 2391, 2783, 2839
BseNI ACTGG 4 cut(s) 827, 1492, 2634, 2676
BseRI GAGGAG 3 cut(s) 148, 1310, 3036
BseXI GCAGC 8 cut(s) 5, 287, 290, 293, 315, 2533, 2800, 3002
BseYI CCCAGC 1 cut(s) 2196
BsgI GTGCAG 1 cut(s) 4
Bsh1236I CGCG 1 cut(s) 2956
Bsh1285I CGRYCG 1 cut(s) 2960
BshFI GGCC 5 cut(s) 99, 636, 1868, 2214, 2547
BshNI GGYRCC 1 cut(s) 497
BshVI ATCGAT 2 cut(s) 2643, 2758
BsiEI CGRYCG 1 cut(s) 2960
BsiHKCI CYCGRG 1 cut(s) 320
BsiSI CCGG 1 cut(s) 2960
BslFI GGGAC 3 cut(s) 843, 1388, 1409
BslI CCNNNNNNNGG 3 cut(s) 322, 1508, 1864
BsmAI GTCTC 5 cut(s) 57, 257, 747, 1908, 2310
BsmFI GGGAC 3 cut(s) 843, 1388, 1409
BsmI GAATGC 1 cut(s) 2832
BsnI GGCC 5 cut(s) 99, 636, 1868, 2214, 2547
BsoBI CYCGRG 1 cut(s) 320
Bsp119I TTCGAA 1 cut(s) 2804
Bsp1407I TGTACA 2 cut(s) 747, 2482
Bsp19I CCATGG 1 cut(s) 552
BspACI CCGC 4 cut(s) 616, 1104, 1765, 1932
BspANI GGCC 5 cut(s) 99, 636, 1868, 2214, 2547
BspCNI CTCAG 9 cut(s) 139, 253, 340, 529, 1516, 2176, 2392, 2782, 2838
BspDI ATCGAT 2 cut(s) 2643, 2758
BspFNI CGCG 1 cut(s) 2956
BspHI TCATGA 1 cut(s) 2473
BspLI GGNNCC 5 cut(s) 499, 859, 1397, 2064, 2490
BspMAI CTGCAG 2 cut(s) 1920, 2818
BspPI GGATC 6 cut(s) 116, 1311, 1849, 2057, 2070, 2605
BspQI GCTCTTC 2 cut(s) 683, 1123
BspT104I TTCGAA 1 cut(s) 2804
BspT107I GGYRCC 1 cut(s) 497
BsrBI CCGCTC 1 cut(s) 1104
BsrDI GCAATG 4 cut(s) 107, 291, 1586, 2569
BsrGI TGTACA 2 cut(s) 747, 2482
BsrI ACTGG 4 cut(s) 827, 1492, 2634, 2676
BssECI CCNNGG 5 cut(s) 552, 763, 1502, 1882, 2066
BssNAI GTATAC 1 cut(s) 1688
BssSI CACGAG 2 cut(s) 1620, 2910
BssT1I CCWWGG 3 cut(s) 552, 1502, 2066
Bst1107I GTATAC 1 cut(s) 1688
Bst2BI CACGAG 2 cut(s) 1620, 2910
Bst2UI CCWGG 3 cut(s) 651, 1400, 1883
Bst4CI ACNGT 6 cut(s) 595, 767, 1981, 2122, 2284, 2368
Bst6I CTCTTC 6 cut(s) 213, 240, 683, 1123, 1793, 2649
BstAUI TGTACA 2 cut(s) 747, 2482
BstBI TTCGAA 1 cut(s) 2804
BstC8I GCNNGC 5 cut(s) 336, 1599, 1879, 2040, 2424
BstDSI CCRYGG 2 cut(s) 552, 763
BstEII GGTNACC 1 cut(s) 653
BstENI CCTNNNNNAGG 1 cut(s) 1862
BstF5I GGATG 7 cut(s) 641, 703, 1113, 1315, 1632, 2735, 2851
BstFNI CGCG 1 cut(s) 2956
BstHHI GCGC 1 cut(s) 2956
BstMAI GTCTC 5 cut(s) 57, 257, 747, 1908, 2310
BstMCI CGRYCG 1 cut(s) 2960
BstMWI GCNNNNNNNGC 3 cut(s) 281, 1874, 2951
BstNI CCWGG 3 cut(s) 651, 1400, 1883
BstNSI RCATGY 7 cut(s) 358, 1364, 1751, 1788, 2141, 2562, 2748
BstPAI GACNNNNGTC 1 cut(s) 2962
BstPI GGTNACC 1 cut(s) 653
BstSCI CCNGG 3 cut(s) 649, 1398, 1881
BstSFI CTRYAG 5 cut(s) 73, 195, 573, 1916, 2814
BstUI CGCG 1 cut(s) 2956
BstV1I GCAGC 8 cut(s) 5, 287, 290, 293, 315, 2533, 2800, 3002
BstV2I GAAGAC 5 cut(s) 968, 2034, 2324, 2905, 2988
BstX2I RGATCY 2 cut(s) 1854, 2062
BstXI CCANNNNNNTGG 1 cut(s) 1242
BstYI RGATCY 2 cut(s) 1854, 2062
BstZ17I GTATAC 1 cut(s) 1688
Bsu15I ATCGAT 2 cut(s) 2643, 2758
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 5 cut(s) 99, 636, 1868, 2214, 2547
BsuTUI ATCGAT 2 cut(s) 2643, 2758
BtgI CCRYGG 2 cut(s) 552, 763
BtsCI GGATG 7 cut(s) 641, 703, 1113, 1315, 1632, 2735, 2851
BtsI GCAGTG 1 cut(s) 2433
BtsIMutI CAGTG 3 cut(s) 1155, 1499, 2433
Cac8I GCNNGC 5 cut(s) 336, 1599, 1879, 2040, 2424
CciI TCATGA 1 cut(s) 2473
CfoI GCGC 1 cut(s) 2956
Cfr13I GGNCC 6 cut(s) 143, 634, 857, 890, 1396, 2212
ClaI ATCGAT 2 cut(s) 2643, 2758
CseI GACGC 2 cut(s) 1211, 2882
CsiI ACCWGGT 1 cut(s) 649
Csp6I GTAC 9 cut(s) 372, 566, 748, 812, 1717, 2285, 2483, 2602, 2788
CviQI GTAC 9 cut(s) 372, 566, 748, 812, 1717, 2285, 2483, 2602, 2788
DraI TTTAAA 3 cut(s) 589, 1738, 2023
DriI GACNNNNNGTC 1 cut(s) 1674
EaeI YGGCCR 1 cut(s) 2545
Eam1104I CTCTTC 6 cut(s) 213, 240, 683, 1123, 1793, 2649
Eam1105I GACNNNNNGTC 1 cut(s) 1674
EarI CTCTTC 6 cut(s) 213, 240, 683, 1123, 1793, 2649
Eco130I CCWWGG 3 cut(s) 552, 1502, 2066
Eco147I AGGCCT 1 cut(s) 1868
Eco32I GATATC 1 cut(s) 1461
Eco47I GGWCC 4 cut(s) 143, 857, 890, 1396
Eco57I CTGAAG 6 cut(s) 614, 1244, 1414, 1796, 2189, 2967
Eco81I CCTNAGG 1 cut(s) 126
Eco88I CYCGRG 1 cut(s) 320
Eco91I GGTNACC 1 cut(s) 653
EcoNI CCTNNNNNAGG 1 cut(s) 1862
EcoO109I RGGNCCY 3 cut(s) 857, 890, 2212
EcoO65I GGTNACC 1 cut(s) 653
EcoRII CCWGG 3 cut(s) 649, 1398, 1881
EcoRV GATATC 1 cut(s) 1461
EcoT14I CCWWGG 3 cut(s) 552, 1502, 2066
EcoT22I ATGCAT 2 cut(s) 439, 2737
ErhI CCWWGG 3 cut(s) 552, 1502, 2066
FalI AAGNNNNNCTT 4 cut(s) 474, 506, 677, 709
FaqI GGGAC 3 cut(s) 843, 1388, 1409
FauI CCCGC 1 cut(s) 1097
FblI GTMKAC 2 cut(s) 132, 1687
Fnu4HI GCNGC 9 cut(s) 19, 276, 279, 282, 304, 616, 2522, 2814, 2991
FokI GGATG 7 cut(s) 628, 710, 1120, 1322, 1619, 2722, 2858
Fsp4HI GCNGC 9 cut(s) 19, 276, 279, 282, 304, 616, 2522, 2814, 2991
FspBI CTAG 8 cut(s) 347, 402, 782, 923, 956, 1068, 1815, 2298
GlaI GCGC 1 cut(s) 2955
GluI GCNGC 9 cut(s) 19, 276, 279, 282, 304, 616, 2522, 2814, 2991
GsaI CCCAGC 1 cut(s) 2200
GsuI CTGGAG 2 cut(s) 893, 2744
HaeIII GGCC 5 cut(s) 99, 636, 1868, 2214, 2547
HapII CCGG 1 cut(s) 2960
HgaI GACGC 2 cut(s) 1211, 2882
HhaI GCGC 1 cut(s) 2956
Hin6I GCGC 1 cut(s) 2954
HinP1I GCGC 1 cut(s) 2954
HindIII AAGCTT 2 cut(s) 86, 1946
HpaII CCGG 1 cut(s) 2960
HphI GGTGA 4 cut(s) 239, 522, 639, 647
Hpy166II GTNNAC 5 cut(s) 133, 1384, 1688, 2705, 2766
Hpy8I GTNNAC 5 cut(s) 133, 1384, 1688, 2705, 2766
Hpy99I CGWCG 2 cut(s) 34, 2898
HpyCH4III ACNGT 6 cut(s) 595, 767, 1981, 2122, 2284, 2368
HpyF10VI GCNNNNNNNGC 3 cut(s) 281, 1874, 2951
HspAI GCGC 1 cut(s) 2954
LguI GCTCTTC 2 cut(s) 683, 1123
LmnI GCTCC 4 cut(s) 446, 1297, 2035, 2518
Lsp1109I GCAGC 8 cut(s) 5, 287, 290, 293, 315, 2533, 2800, 3002
LweI GCATC 7 cut(s) 691, 1600, 1695, 1776, 2350, 2722, 2744
MabI ACCWGGT 1 cut(s) 649
MaeI CTAG 8 cut(s) 347, 402, 782, 923, 956, 1068, 1815, 2298
MaeIII GTNAC 9 cut(s) 404, 653, 1078, 1512, 2072, 2133, 2395, 2848, 3040
MbiI CCGCTC 1 cut(s) 1104
MfeI CAATTG 1 cut(s) 2320
MflI RGATCY 2 cut(s) 1854, 2062
MlsI TGGCCA 1 cut(s) 2547
MluNI TGGCCA 1 cut(s) 2547
MlyI GAGTC 7 cut(s) 63, 1024, 1154, 2447, 2761, 2972, 3037
MmeI TCCRAC 4 cut(s) 12, 186, 274, 2643
Mox20I TGGCCA 1 cut(s) 2547
Mph1103I ATGCAT 2 cut(s) 439, 2737
MroXI GAANNNNTTC 4 cut(s) 1416, 1610, 2111, 2174
MscI TGGCCA 1 cut(s) 2547
MslI CAYNNNNRTG 2 cut(s) 970, 1240
Msp20I TGGCCA 1 cut(s) 2547
MspA1I CMGCKG 1 cut(s) 1846
MspI CCGG 1 cut(s) 2960
MspR9I CCNGG 3 cut(s) 651, 1400, 1883
MunI CAATTG 1 cut(s) 2320
Mva1269I GAATGC 1 cut(s) 2832
MvaI CCWGG 3 cut(s) 651, 1400, 1883
MvnI CGCG 1 cut(s) 2956
MwoI GCNNNNNNNGC 3 cut(s) 281, 1874, 2951
NcoI CCATGG 1 cut(s) 552
NlaIV GGNNCC 5 cut(s) 499, 859, 1397, 2064, 2490
NmuCI GTSAC 5 cut(s) 653, 1512, 2133, 2395, 3040
NsiI ATGCAT 2 cut(s) 439, 2737
NspI RCATGY 7 cut(s) 358, 1364, 1751, 1788, 2141, 2562, 2748
NspV TTCGAA 1 cut(s) 2804
PaeR7I CTCGAG 1 cut(s) 320
PagI TCATGA 1 cut(s) 2473
PceI AGGCCT 1 cut(s) 1868
PciI ACATGT 3 cut(s) 1747, 2137, 2744
PciSI GCTCTTC 2 cut(s) 683, 1123
PctI GAATGC 1 cut(s) 2832
PdmI GAANNNNTTC 4 cut(s) 1416, 1610, 2111, 2174
PfeI GAWTC 7 cut(s) 578, 800, 1564, 2551, 2681, 2719, 2773
PkrI GCNGC 9 cut(s) 20, 277, 280, 283, 305, 617, 2523, 2815, 2992
PleI GAGTC 7 cut(s) 63, 1023, 1154, 2446, 2761, 2971, 3037
PpsI GAGTC 7 cut(s) 63, 1023, 1154, 2446, 2761, 2971, 3037
PpuMI RGGWCCY 2 cut(s) 857, 890
PscI ACATGT 3 cut(s) 1747, 2137, 2744
PshAI GACNNNNGTC 1 cut(s) 2962
PshBI ATTAAT 1 cut(s) 773
PsiI TTATAA 1 cut(s) 2697
Psp5II RGGWCCY 2 cut(s) 857, 890
Psp6I CCWGG 3 cut(s) 649, 1398, 1881
PspEI GGTNACC 1 cut(s) 653
PspFI CCCAGC 1 cut(s) 2196
PspGI CCWGG 3 cut(s) 649, 1398, 1881
PspN4I GGNNCC 5 cut(s) 499, 859, 1397, 2064, 2490
PspPI GGNCC 6 cut(s) 143, 634, 857, 890, 1396, 2212
PspPPI RGGWCCY 2 cut(s) 857, 890
PstI CTGCAG 2 cut(s) 1920, 2818
PsuI RGATCY 2 cut(s) 1854, 2062
PvuII CAGCTG 1 cut(s) 1846
RsaI GTAC 9 cut(s) 373, 567, 749, 813, 1718, 2286, 2484, 2603, 2789
RsaNI GTAC 9 cut(s) 372, 566, 748, 812, 1717, 2285, 2483, 2602, 2788
RseI CAYNNNNRTG 2 cut(s) 970, 1240
SapI GCTCTTC 2 cut(s) 683, 1123
SatI GCNGC 9 cut(s) 19, 276, 279, 282, 304, 616, 2522, 2814, 2991
Sau96I GGNCC 6 cut(s) 143, 634, 857, 890, 1396, 2212
SchI GAGTC 7 cut(s) 63, 1024, 1154, 2447, 2761, 2972, 3037
ScrFI CCNGG 3 cut(s) 651, 1400, 1883
SexAI ACCWGGT 1 cut(s) 649
SfaNI GCATC 7 cut(s) 691, 1600, 1695, 1776, 2350, 2722, 2744
SfcI CTRYAG 5 cut(s) 73, 195, 573, 1916, 2814
Sfr274I CTCGAG 1 cut(s) 320
SfuI TTCGAA 1 cut(s) 2804
SinI GGWCC 4 cut(s) 143, 857, 890, 1396
SlaI CTCGAG 1 cut(s) 320
SmiMI CAYNNNNRTG 2 cut(s) 970, 1240
SmlI CTYRAG 6 cut(s) 89, 320, 815, 1012, 1569, 2086
SmoI CTYRAG 6 cut(s) 89, 320, 815, 1012, 1569, 2086
SseBI AGGCCT 1 cut(s) 1868
SsiI CCGC 4 cut(s) 616, 1104, 1765, 1932
SspMI CTAG 8 cut(s) 347, 402, 782, 923, 956, 1068, 1815, 2298
StuI AGGCCT 1 cut(s) 1868
StyD4I CCNGG 3 cut(s) 649, 1398, 1881
StyI CCWWGG 3 cut(s) 552, 1502, 2066
TaaI ACNGT 6 cut(s) 595, 767, 1981, 2122, 2284, 2368
TaqI TCGA 7 cut(s) 321, 622, 1725, 2643, 2758, 2804, 2896
TatI WGTACW 5 cut(s) 371, 747, 811, 2482, 2601
TauI GCSGC 1 cut(s) 618
TfiI GAWTC 7 cut(s) 578, 800, 1564, 2551, 2681, 2719, 2773
TscAI CASTG 3 cut(s) 1162, 1499, 2433
TseFI GTSAC 5 cut(s) 653, 1512, 2133, 2395, 3040
TseI GCWGC 8 cut(s) 18, 275, 278, 281, 303, 2521, 2813, 2990
Tsp45I GTSAC 5 cut(s) 653, 1512, 2133, 2395, 3040
TspGWI ACGGA 1 cut(s) 1625
TspRI CASTG 3 cut(s) 1162, 1499, 2433
VpaK11BI GGWCC 4 cut(s) 143, 857, 890, 1396
VspI ATTAAT 1 cut(s) 773
XagI CCTNNNNNAGG 1 cut(s) 1862
XapI RAATTY 8 cut(s) 485, 668, 1336, 1552, 1968, 2111, 2275, 2855
XbaI TCTAGA 1 cut(s) 346
XceI RCATGY 7 cut(s) 358, 1364, 1751, 1788, 2141, 2562, 2748
XhoI CTCGAG 1 cut(s) 320
XmiI GTMKAC 2 cut(s) 132, 1687
XmnI GAANNNNTTC 4 cut(s) 1416, 1610, 2111, 2174
XspI CTAG 8 cut(s) 347, 402, 782, 923, 956, 1068, 1815, 2298
Zsp2I ATGCAT 2 cut(s) 439, 2737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.