FvH4_3g40413

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000183
Physical Location & Seq
Forward (+)
34128797 .. 34132415
3619 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40413.t1

Sequence Viewer

Length: 1476 bp
ATGAAGCTAGTTGTCATTGGTGGAGTGGTTATTGGTGAAACTGATTCAATTGCAATAGTCACTCGATCTACTGGAGAAGTGGATTTTTTGGAATTGTTTGGAGATGGCAAAACAGGTCCCCAAGTAAATTTGGAGTTCAAGGCAGAAGGTCCCATTTGGAAAACTGGAAAAGTTTATAGGCTAGAGGCTGTTCAAGATGTTCATATACTGCAATTGTCATGGAAACTTCCATGCCTCTGTCAACACTATTTGAAAGGCCCAGAATTTTATTTACATCATCTCCTTGAGCTTGAGGGCAGGGGTTGTTTGCATTTCTACCTCAAAGGGAGAGGGTGGGTAACATATCTAGGTGCTTCGGTGAGCAGCTATCCTGTGGCCAATGTCTTTCGCATGATCATATACCTCACTGACTCTGGACTGGAGAAGATTTTTGAAATAATTGGGTTGGTGTATCAATACATTAAGTTGCTACATCAGGAGACACCAGAATGGATATTTCGGGACCTGCAGGATATAGGGAACATGTGCTGTAGATTTGCAGAGGAGGAGCCTTTCCAGGATGATTATGCTTCAAACCTTGCAGAAAATTTACAACGTTATGCAGCAGAGCATGTTATTTATGGGGACTATATGTTTGAGATATGGGATATGGTATTGATACAGAAAGTTCTTGGTTTCCTCTCTCCAGAAAACATGAGGATTGATGTGGTATCAAAGTCCCCATCTATGTCAGAAGGTACACTATATAGATTGCTGCCGAGTGGACATTGTAATATATTGCTATTGATCTACATTGAGGGCCTTTTCCATGGTAATTTGTCACAAGAAGAAGCAATTAGCCTTTCAAATTTGTTCAAGACAAACTTTTCTGTACAATCACTTCCGGTCAAATTGATGTTTAGAAATCATTGTATTTGTCTTCCTCCTAATGCTAATCTCATAAGAGATGCTACTTTGAAGAACAAGTCAGAAACAAACTCTGTGGCAGAGCTGTATTTTCAAATTGAATGGGCAGTTGGGAGTGAGTCCATGAGATGGAAAGTTCTGATAGATCTTTTGGGTGTAATTATAAAGGAACCACATTTTAATCAGCTAAGGACGAAGGAGCTGCTCGGGTATGGCGTTGAGTGTGGCCAGGATTTAAAATGGGGTGTTTTTGGCATCCTTTTCTCTGTTCAGTCATCGGATTACAACCCGGTCCATCTACAAGGAAGACTTGACAACTTTATAAATAGTCTGGAAGTGTTATTGGCAGCAGAAGAACTCAGAAGCATTCAGAAGGAGGATGTTATCATCTTTTACAAGACCTGTTTGCAACAATCATCTCCGAAGTGTCGAAGACTTGCAACTCATGTGTGGGGTTGCAACACTGACTTCAAAGAGGCAGATGTAGCACGGCCACAGTCTGTGCAAGTCCTTGAAGACGTTGCTGCGTTTAAGATGTCATCTAAGTTCTATGGTCCTGACATACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

492

Amino Acids

55.95

Weight (kDa)

5.47

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16_M PF16187 178 - 240 5.8e-14 Middle or third domain of peptidase_M16
Peptidase_M16_C PF05193 268 - 419 1.3e-09 Peptidase M16 inactive domain
PqqF-like_C_4 PF22456 352 - 423 2.3e-12 PQQ synthase PqqF-like, C-terminal lobe domain 4
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1070, 1229
Acc36I ACCTGC 1 cut(s) 513
AccB7I CCANNNNNTGG 1 cut(s) 1035
AclI AACGTT 1 cut(s) 595
AcoI YGGCCR 3 cut(s) 375, 1132, 1397
AcsI RAATTY 4 cut(s) 127, 263, 586, 847
AfaI GTAC 2 cut(s) 739, 873
AfiI CCNNNNNNNGG 1 cut(s) 1035
AflIII ACRYGT 1 cut(s) 522
AjnI CCWGG 2 cut(s) 555, 1134
AjuI GAANNNNNNNTTGG 2 cut(s) 999, 1031
AluBI AGCT 6 cut(s) 7, 289, 366, 991, 1093, 1108
AluI AGCT 6 cut(s) 7, 289, 366, 991, 1093, 1108
Alw26I GTCTC 1 cut(s) 473
Ama87I CYCGRG 1 cut(s) 1112
AoxI GGCC 5 cut(s) 256, 375, 799, 1132, 1397
ApeKI GCWGC 6 cut(s) 363, 602, 754, 1108, 1253, 1430
ApoI RAATTY 4 cut(s) 127, 263, 586, 847
ArsI GACNNNNNNTTYG 2 cut(s) 617, 649
AspS9I GGNCC 7 cut(s) 116, 149, 257, 502, 799, 1198, 1460
AsuC2I CCSGG 1 cut(s) 1196
AsuHPI GGTGA 2 cut(s) 47, 370
AvaI CYCGRG 1 cut(s) 1112
AvaII GGWCC 5 cut(s) 116, 149, 502, 1198, 1460
BalI TGGCCA 2 cut(s) 377, 1134
BarI GAAGNNNNNNTAC 2 cut(s) 864, 896
BbsI GAAGAC 4 cut(s) 911, 1219, 1345, 1428
BbvI GCAGC 6 cut(s) 375, 614, 741, 1095, 1265, 1417
BccI CCATC 4 cut(s) 98, 730, 1029, 1209
BceAI ACGGC 1 cut(s) 1412
BcgI CGANNNNNNTGC 2 cut(s) 1090, 1124
BciT130I CCWGG 2 cut(s) 557, 1136
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 1 cut(s) 1196
BcoDI GTCTC 1 cut(s) 473
BfaI CTAG 3 cut(s) 8, 182, 347
BfmI CTRYAG 2 cut(s) 506, 529
BfuAI ACCTGC 1 cut(s) 513
BglII AGATCT 1 cut(s) 1051
BisI GCNGC 6 cut(s) 364, 603, 755, 1109, 1254, 1431
BlsI GCNGC 6 cut(s) 365, 604, 756, 1110, 1255, 1432
Bme1390I CCNGG 3 cut(s) 557, 1136, 1196
Bme18I GGWCC 5 cut(s) 116, 149, 502, 1198, 1460
BmeT110I CYCGRG 1 cut(s) 1112
BmgT120I GGNCC 7 cut(s) 116, 149, 257, 502, 799, 1198, 1460
BmiI GGNNCC 5 cut(s) 118, 151, 503, 549, 1077
BmrFI CCNGG 3 cut(s) 557, 1136, 1196
BmsI GCATC 2 cut(s) 937, 1170
BpiI GAAGAC 4 cut(s) 911, 1219, 1345, 1428
BpmI CTGGAG 3 cut(s) 93, 440, 669
Bpu10I CCTNAGC 1 cut(s) 1094
BpuEI CTTGAG 2 cut(s) 305, 311
BpuMI CCSGG 1 cut(s) 1196
BsaJI CCNNGG 1 cut(s) 808
BsaWI WCCGGW 1 cut(s) 883
BsaXI ACNNNNNCTCC 2 cut(s) 264, 294
Bsc4I CCNNNNNNNGG 1 cut(s) 1035
Bse1I ACTGG 3 cut(s) 76, 169, 423
BseBI CCWGG 2 cut(s) 557, 1136
BseDI CCNNGG 1 cut(s) 808
BseGI GGATG 3 cut(s) 565, 1161, 1291
BseLI CCNNNNNNNGG 1 cut(s) 1035
BseMII CTCAG 1 cut(s) 1279
BseNI ACTGG 3 cut(s) 76, 169, 423
BseRI GAGGAG 2 cut(s) 557, 560
BseXI GCAGC 6 cut(s) 375, 614, 741, 1095, 1265, 1417
BshFI GGCC 5 cut(s) 258, 377, 801, 1134, 1399
BsiHKCI CYCGRG 1 cut(s) 1112
BsiSI CCGG 2 cut(s) 884, 1196
BslFI GGGAC 5 cut(s) 102, 135, 515, 638, 703
BslI CCNNNNNNNGG 1 cut(s) 1035
BsmAI GTCTC 1 cut(s) 473
BsmFI GGGAC 5 cut(s) 102, 135, 515, 638, 703
BsmI GAATGC 1 cut(s) 1272
BsnI GGCC 5 cut(s) 258, 377, 801, 1134, 1399
BsoBI CYCGRG 1 cut(s) 1112
Bsp1407I TGTACA 1 cut(s) 871
Bsp143I GATC 4 cut(s) 65, 393, 786, 1051
Bsp19I CCATGG 1 cut(s) 808
BspANI GGCC 5 cut(s) 258, 377, 801, 1134, 1399
BspCNI CTCAG 1 cut(s) 1278
BspLI GGNNCC 5 cut(s) 118, 151, 503, 549, 1077
BspMAI CTGCAG 1 cut(s) 510
BspMI ACCTGC 1 cut(s) 513
BsrGI TGTACA 1 cut(s) 871
BsrI ACTGG 3 cut(s) 76, 169, 423
BssECI CCNNGG 1 cut(s) 808
BssMI GATC 4 cut(s) 65, 393, 786, 1051
BssT1I CCWWGG 1 cut(s) 808
Bst2UI CCWGG 2 cut(s) 557, 1136
Bst4CI ACNGT 1 cut(s) 1404
BstAUI TGTACA 1 cut(s) 871
BstDEI CTNAG 3 cut(s) 1094, 1265, 1449
BstDSI CCRYGG 1 cut(s) 808
BstF5I GGATG 3 cut(s) 565, 1161, 1291
BstKTI GATC 4 cut(s) 68, 396, 789, 1054
BstMAI GTCTC 1 cut(s) 473
BstMBI GATC 4 cut(s) 65, 393, 786, 1051
BstMWI GCNNNNNNNGC 1 cut(s) 1391
BstNI CCWGG 2 cut(s) 557, 1136
BstNSI RCATGY 2 cut(s) 526, 614
BstSCI CCNGG 3 cut(s) 555, 1134, 1194
BstSFI CTRYAG 2 cut(s) 506, 529
BstV1I GCAGC 6 cut(s) 375, 614, 741, 1095, 1265, 1417
BstV2I GAAGAC 4 cut(s) 911, 1219, 1345, 1428
BstX2I RGATCY 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 1051
BsuRI GGCC 5 cut(s) 258, 377, 801, 1134, 1399
BtgI CCRYGG 1 cut(s) 808
BtsCI GGATG 3 cut(s) 565, 1161, 1291
BtsIMutI CAGTG 2 cut(s) 405, 1368
BveI ACCTGC 1 cut(s) 513
Cfr13I GGNCC 7 cut(s) 116, 149, 257, 502, 799, 1198, 1460
Csp6I GTAC 2 cut(s) 738, 872
CspCI CAANNNNNGTGG 2 cut(s) 963, 998
CviAII CATG 9 cut(s) 219, 231, 391, 523, 611, 694, 809, 1030, 1352
CviQI GTAC 2 cut(s) 738, 872
DdeI CTNAG 3 cut(s) 1094, 1265, 1449
DpnI GATC 4 cut(s) 67, 395, 788, 1053
DpnII GATC 4 cut(s) 65, 393, 786, 1051
DraI TTTAAA 1 cut(s) 1143
EaeI YGGCCR 3 cut(s) 375, 1132, 1397
Eco130I CCWWGG 1 cut(s) 808
Eco47I GGWCC 5 cut(s) 116, 149, 502, 1198, 1460
Eco88I CYCGRG 1 cut(s) 1112
EcoO109I RGGNCCY 4 cut(s) 116, 149, 502, 799
EcoRII CCWGG 2 cut(s) 555, 1134
EcoT14I CCWWGG 1 cut(s) 808
ErhI CCWWGG 1 cut(s) 808
FaeI CATG 9 cut(s) 222, 234, 394, 526, 614, 697, 812, 1033, 1355
FalI AAGNNNNNCTT 4 cut(s) 848, 880, 1200, 1232
FaqI GGGAC 5 cut(s) 102, 135, 515, 638, 703
FatI CATG 9 cut(s) 218, 230, 390, 522, 610, 693, 808, 1029, 1351
FbaI TGATCA 1 cut(s) 393
Fnu4HI GCNGC 6 cut(s) 364, 603, 755, 1109, 1254, 1431
FokI GGATG 3 cut(s) 572, 1148, 1298
Fsp4HI GCNGC 6 cut(s) 364, 603, 755, 1109, 1254, 1431
FspBI CTAG 3 cut(s) 8, 182, 347
GluI GCNGC 6 cut(s) 364, 603, 755, 1109, 1254, 1431
GsuI CTGGAG 3 cut(s) 93, 440, 669
HaeIII GGCC 5 cut(s) 258, 377, 801, 1134, 1399
HapII CCGG 2 cut(s) 884, 1196
Hin1II CATG 9 cut(s) 222, 234, 394, 526, 614, 697, 812, 1033, 1355
HincII GTYRAC 1 cut(s) 242
HindII GTYRAC 1 cut(s) 242
HinfI GANTC 3 cut(s) 44, 410, 1025
HpaII CCGG 2 cut(s) 884, 1196
HphI GGTGA 2 cut(s) 47, 370
Hpy166II GTNNAC 3 cut(s) 242, 740, 764
Hpy188I TCNGA 7 cut(s) 733, 970, 1047, 1186, 1268, 1278, 1329
Hpy188III TCNNGA 8 cut(s) 194, 414, 476, 500, 686, 856, 1238, 1463
Hpy8I GTNNAC 3 cut(s) 242, 740, 764
HpyAV CCTTC 4 cut(s) 140, 728, 1096, 1273
HpyCH4III ACNGT 1 cut(s) 1404
HpyCH4IV ACGT 2 cut(s) 595, 1425
HpyF10VI GCNNNNNNNGC 1 cut(s) 1391
HpyF3I CTNAG 3 cut(s) 1094, 1265, 1449
HpySE526I ACGT 2 cut(s) 595, 1425
Hsp92II CATG 9 cut(s) 222, 234, 394, 526, 614, 697, 812, 1033, 1355
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 4 cut(s) 65, 393, 786, 1051
LmnI GCTCC 2 cut(s) 547, 1105
Lsp1109I GCAGC 6 cut(s) 375, 614, 741, 1095, 1265, 1417
LweI GCATC 2 cut(s) 937, 1170
MaeI CTAG 3 cut(s) 8, 182, 347
MaeII ACGT 2 cut(s) 595, 1425
MaeIII GTNAC 3 cut(s) 58, 337, 819
MalI GATC 4 cut(s) 67, 395, 788, 1053
MboI GATC 4 cut(s) 65, 393, 786, 1051
MboII GAAGA 8 cut(s) 436, 839, 911, 970, 1224, 1271, 1350, 1433
MfeI CAATTG 2 cut(s) 48, 212
MflI RGATCY 1 cut(s) 1051
MlsI TGGCCA 2 cut(s) 377, 1134
MluNI TGGCCA 2 cut(s) 377, 1134
MlyI GAGTC 2 cut(s) 404, 1034
Mox20I TGGCCA 2 cut(s) 377, 1134
MscI TGGCCA 2 cut(s) 377, 1134
MseI TTAA 4 cut(s) 462, 1086, 1142, 1437
MslI CAYNNNNRTG 1 cut(s) 487
Msp20I TGGCCA 2 cut(s) 377, 1134
MspI CCGG 2 cut(s) 884, 1196
MspR9I CCNGG 3 cut(s) 557, 1136, 1196
MunI CAATTG 2 cut(s) 48, 212
Mva1269I GAATGC 1 cut(s) 1272
MvaI CCWGG 2 cut(s) 557, 1136
MwoI GCNNNNNNNGC 1 cut(s) 1391
NciI CCSGG 1 cut(s) 1196
NcoI CCATGG 1 cut(s) 808
NdeII GATC 4 cut(s) 65, 393, 786, 1051
NlaIII CATG 9 cut(s) 222, 234, 394, 526, 614, 697, 812, 1033, 1355
NlaIV GGNNCC 5 cut(s) 118, 151, 503, 549, 1077
NmeAIII GCCGAG 1 cut(s) 783
NmuCI GTSAC 2 cut(s) 58, 819
NspI RCATGY 2 cut(s) 526, 614
PciI ACATGT 1 cut(s) 522
PcsI WCGNNNNNNNCGW 1 cut(s) 1119
PctI GAATGC 1 cut(s) 1272
PfeI GAWTC 1 cut(s) 44
PflMI CCANNNNNTGG 1 cut(s) 1035
PfoI TCCNGGA 1 cut(s) 555
PkrI GCNGC 6 cut(s) 365, 604, 756, 1110, 1255, 1432
PleI GAGTC 2 cut(s) 404, 1033
PpsI GAGTC 2 cut(s) 404, 1033
PpuMI RGGWCCY 3 cut(s) 116, 149, 502
PscI ACATGT 1 cut(s) 522
PsiI TTATAA 2 cut(s) 1070, 1229
Psp1406I AACGTT 1 cut(s) 595
Psp5II RGGWCCY 3 cut(s) 116, 149, 502
Psp6I CCWGG 2 cut(s) 555, 1134
PspGI CCWGG 2 cut(s) 555, 1134
PspN4I GGNNCC 5 cut(s) 118, 151, 503, 549, 1077
PspPI GGNCC 7 cut(s) 116, 149, 257, 502, 799, 1198, 1460
PspPPI RGGWCCY 3 cut(s) 116, 149, 502
PstI CTGCAG 1 cut(s) 510
PsuI RGATCY 1 cut(s) 1051
RsaI GTAC 2 cut(s) 739, 873
RsaNI GTAC 2 cut(s) 738, 872
RseI CAYNNNNRTG 1 cut(s) 487
SaqAI TTAA 4 cut(s) 462, 1086, 1142, 1437
SatI GCNGC 6 cut(s) 364, 603, 755, 1109, 1254, 1431
Sau3AI GATC 4 cut(s) 65, 393, 786, 1051
Sau96I GGNCC 7 cut(s) 116, 149, 257, 502, 799, 1198, 1460
SbfI CCTGCAGG 1 cut(s) 510
SchI GAGTC 2 cut(s) 404, 1034
ScrFI CCNGG 3 cut(s) 557, 1136, 1196
SdaI CCTGCAGG 1 cut(s) 510
SfaNI GCATC 2 cut(s) 937, 1170
SfcI CTRYAG 2 cut(s) 506, 529
SinI GGWCC 5 cut(s) 116, 149, 502, 1198, 1460
SmiMI CAYNNNNRTG 1 cut(s) 487
SmlI CTYRAG 2 cut(s) 284, 290
SmoI CTYRAG 2 cut(s) 284, 290
Sse8387I CCTGCAGG 1 cut(s) 510
SspMI CTAG 3 cut(s) 8, 182, 347
StyD4I CCNGG 3 cut(s) 555, 1134, 1194
StyI CCWWGG 1 cut(s) 808
TaaI ACNGT 1 cut(s) 1404
TaiI ACGT 2 cut(s) 598, 1428
TaqI TCGA 2 cut(s) 64, 1336
TatI WGTACW 1 cut(s) 871
TfiI GAWTC 1 cut(s) 44
Tru1I TTAA 4 cut(s) 462, 1086, 1142, 1437
Tru9I TTAA 4 cut(s) 462, 1086, 1142, 1437
TscAI CASTG 2 cut(s) 412, 1375
TseFI GTSAC 2 cut(s) 58, 819
TseI GCWGC 6 cut(s) 363, 602, 754, 1108, 1253, 1430
Tsp45I GTSAC 2 cut(s) 58, 819
TspDTI ATGAA 2 cut(s) 17, 191
TspRI CASTG 2 cut(s) 412, 1375
Van91I CCANNNNNTGG 1 cut(s) 1035
VpaK11BI GGWCC 5 cut(s) 116, 149, 502, 1198, 1460
XapI RAATTY 4 cut(s) 127, 263, 586, 847
XceI RCATGY 2 cut(s) 526, 614
XspI CTAG 3 cut(s) 8, 182, 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.