Rorug05G0420800

Belongs to the peptidase M16 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000183
Physical Location & Seq
Forward (+)
58498063 .. 58499607
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0420800.1

Sequence Viewer

Length: 1545 bp
ATGCTCTGTTTATGGAGAAGAAAGAATATAATAGAAAGTCACCTTCAATCTGATAGTTTTGCAGCCTCCCAAAACCAACTTGTGACAGTCGAGTTTGACACCTTCTTAAATGACTGGGATCCACAGGAGACGCATGTCGGCATCAATATCAACACCATCTCCTCAGTTGTTCATTCCAGTTGGGATCCTATTCTTCACAGTGGTAAGGTGGGCAATGTCCCGATATCATACAAAGCTGCGACCACCAATTTTAGTGTGCGCTGGACATACGAGGGCAATGCTTCTTATATTTCGTACCTTATTGACCTACGAAAGGTTCTTCCCGAGTGGGTTACAGTTGGTTTTTCATCTGCTACTGGCATTTATAATGAGCGCCATATTATATACTCATGGGAGTTCAATTCAGATTTGGATTCAAGCGGCAAAAACAAGAAGAGAGGAATGTTATTCTTGATTAAGGTGGCTGCACTACCTTCTTTATTTGCTTTTATTCTTGGAGTTGGTGTAGCCATATGTTGTTTGGTGTCAAGCAAGCGAAAGAAGAGCAGTGGCGTAATTAGTAATGACCTTGAGAGACAAGCGTTACCAAAGCAGTTTAGTCCCGAAGAACTGCATGCTGCCACCAATGGCTTCGCACCGGATAGAAGGCTAGGCCGAGGAGGATCTGGACAAGTTTATAAAGGACAGCTACAAGGTCTAGGCCGTGAAGTAGCTATCAAGAAAATCTGCACAGGAACTGATCAGCGCTACGAGGAAATATTTATGAATGAAGTCAAAATAATAAGCCGTTTAATCCATCGAAATCTGGTGCCATTCATTGGATGGTGTCATGATCAAAAGCGCAACGAGTGCTTGGTTGTTTATGAATACATGCCAAATGGCAGCCTTGACCAGCACCTATTTGGCCATAGAAACAGCCTGCAATGGAATTCAAGGTACGAGATAGCTTTTGGCTTGGCCAGAGCCCTTCATTACCTACATGAAGATGCAGGGCGTTGTGTCTTTCACAGGGACATCAAGTCAGCTAACGTGTTGTTGGACAAGGATTTGATAACTAAACTTGGTGATTTTGGGATTTCTAAGCGATTGGATCCTCAGTTCCCAACTCAGACAACAGAAGTGGTTGGGACTGTGGGTTACATCGCCCCCGAATATGCTATTGAAGGGAAGGCTAGTAAAGAATCTGACATGTTTAGTTTTGGAGTTGTGGCCTTAGAAATTGCTTGTGGAAGGAAGAGTTACAATTTCAATGACAACTTGCTACTTTATGAGTGGGTTTGGAAATTTTACCTTGAAGGGCATCTTCTCGATGCAGCTGATGAAAGATTGGAAAGGGAATTTGAACAAGAAGAAATGAAATGCTTGTTAATTGTGGGATTATGGTGTACCCATCCCCATAATAAGGAAAGACCAAACGCAGGACAAGTGATGAAGGTACTTAAGCTTGAAGAACCATTGCCGGCATTGCCACTTGACATGCATCTTCAACAGCCTTTGCCTCAACCTCAACTACAATCTGGCTCAACTTCGGCTTCTCGCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005102 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005777 GO:0005782 GO:0005829 GO:0006508 GO:0006518 GO:0006605 GO:0006625 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007275 GO:0007568 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0008286 GO:0008340 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009893 GO:0009894 GO:0009896 GO:0009986 GO:0009987 GO:0010033 GO:0010243 GO:0010259 GO:0010604 GO:0010815 GO:0010992 GO:0015031 GO:0015833 GO:0016043 GO:0016787 GO:0017046 GO:0017076 GO:0017144 GO:0019222 GO:0019538 GO:0019725 GO:0022607 GO:0023052 GO:0030163 GO:0030554 GO:0031334 GO:0031907 GO:0031974 GO:0032459 GO:0032461 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032868 GO:0032869 GO:0032870 GO:0033036 GO:0033218 GO:0033365 GO:0034613 GO:0034641 GO:0035639 GO:0036094 GO:0042176 GO:0042221 GO:0042277 GO:0042562 GO:0042579 GO:0042592 GO:0042737 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043434 GO:0043559 GO:0043574 GO:0043603 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045732 GO:0046872 GO:0046907 GO:0046914 GO:0046983 GO:0048518 GO:0048522 GO:0048856 GO:0050435 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051259 GO:0051260 GO:0051603 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0065003 GO:0065007 GO:0065008 GO:0070011 GO:0070013 GO:0070727 GO:0070887 GO:0071310 GO:0071375 GO:0071417 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0097159 GO:0097242 GO:0097367 GO:0140030 GO:0140035 GO:0140036 GO:0140096 GO:1901142 GO:1901143 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901652 GO:1901653 GO:1901698 GO:1901699 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M16 Peptidase_M16_C Peptidase_M16_M

Protein Analysis

514

Amino Acids

58.23

Weight (kDa)

6.79

Isoelectric Point (pI)

50.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 21 - 143 7.3e-34 Legume lectin domain
Pkinase PF00069 214 - 478 1.6e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 214 - 422 1.8e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000183)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G01440
fragaria_vesca FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40361 FvH4_3g40370 FvH4_3g40410 FvH4_3g40410 FvH4_3g40411 FvH4_3g40412 FvH4_3g40413 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310 FvH4_5g00310
rosa_chinensis RchiOBHm_Chr1g0321501 RchiOBHm_Chr1g0334011 RchiOBHm_Chr1g0334041 RchiOBHm_Chr1g0335131 RchiOBHm_Chr2g0145491 RchiOBHm_Chr3g0492731 RchiOBHm_Chr5g0072791 RchiOBHm_Chr5g0072891 RchiOBHm_Chr5g0072931 RchiOBHm_Chr5g0072951 RchiOBHm_Chr5g0073041 RchiOBHm_Chr5g0073051 RchiOBHm_Chr5g0073061 RchiOBHm_Chr5g0073071 RchiOBHm_Chr5g0074151 RchiOBHm_Chr5g0074161 RchiOBHm_Chr7g0202261
rosa_laevigata RLG00000014828 RLG00000036342 RLG00000036343 RLG00000036346 RLG00000036350 RLG00000036353 RLG00000036355 RLG00000036356
rosa_multiflora Rmu_co8227831.1_g000001 Rmu_co8517625.1_g000001 Rmu_sc0001113.1_g000013 Rmu_sc0001394.1_g000005 Rmu_sc0002548.1_g000005 Rmu_sc0003160.1_g000003 Rmu_sc0003160.1_g000023 Rmu_sc0005069.1_g000004 Rmu_sc0005069.1_g000026 Rmu_sc0005592.1_g000031 Rmu_sc0005592.1_g000032 Rmu_sc0005592.1_g000033 Rmu_sc0007034.1_g000002 Rmu_sc0008926.1_g000001 Rmu_sc0008926.1_g000005 Rmu_sc0010523.1_g000004 Rmu_sc0010523.1_g000005 Rmu_sc0010900.1_g000006 Rmu_sc0010900.1_g000008 Rmu_sc0018267.1_g000001 Rmu_sc0040908.1_g000001
rosa_roxburghii Rroxscaffold_1G00008160 Rroxscaffold_1G00008170 Rroxscaffold_1G00008240 Rroxscaffold_1G00008250 Rroxscaffold_1G00008280 Rroxscaffold_1G00008290 Rroxscaffold_1G00008310 Rroxscaffold_1G00008340 Rroxscaffold_1G00008360 Rroxscaffold_2G00147720 Rroxscaffold_3G00254700 Rroxscaffold_5G00358330
rosa_rugosa Rorug01G0030700 Rorug03G0256700 Rorug03G0282500 Rorug04G0070500 Rorug05G0104700 Rorug05G0241200 Rorug05G0414700 Rorug05G0418900 Rorug05G0420400 Rorug05G0420500 Rorug05G0420500 Rorug05G0420700 Rorug05G0420800 Rorug05G0420900 Rorug06G0037800 Rorug07G0069500 Rorug07G0069600 Rorug07G0069600
rosa_samantha Rh2DG665200 Rh3AG306000 Rh3DG242400 Rh5AG458000 Rh5AG477100 Rh5AG477200 Rh5AG477400 Rh5AG477500 Rh5AG477600 Rh5AG487100 Rh5AG501000 Rh5BG497200 Rh5BG497400 Rh5BG497600 Rh5BG497700 Rh5BG498100 Rh5BG498200 Rh5BG498300 Rh5BG498400 Rh5CG521500 Rh5DG501800 Rh5DG509300 Rh5DG510000 Rh5DG510100 Rh5DG510400 Rh5DG520000 Rh6BG100200 Rh6BG523800 Rh6CG196600 Rh7AG255600 Rh7AG267200 Rh7DG203300
rosa_wichuraiana Rw1G031050 Rw5G044330 Rw5G044340 Rw5G044360 Rw5G044370 Rw5G046550 Rw7G017220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 366, 678
AccB1I GGYRCC 1 cut(s) 808
AccB7I CCANNNNNTGG 1 cut(s) 818
AciI CCGC 1 cut(s) 420
AclWI GGATC 7 cut(s) 113, 126, 179, 192, 670, 1085, 1098
AcoI YGGCCR 2 cut(s) 904, 957
AcsI RAATTY 3 cut(s) 928, 1283, 1337
AfaI GTAC 4 cut(s) 296, 938, 1387, 1437
AfeI AGCGCT 1 cut(s) 746
AfiI CCNNNNNNNGG 4 cut(s) 313, 818, 1402, 1418
AflII CTTAAG 1 cut(s) 1439
AflIII ACRYGT 2 cut(s) 1029, 1188
AhdI GACNNNNNGTC 1 cut(s) 1018
AloI GAACNNNNNNTCC 2 cut(s) 1082, 1114
AluBI AGCT 7 cut(s) 236, 688, 713, 947, 1025, 1316, 1444
AluI AGCT 7 cut(s) 236, 688, 713, 947, 1025, 1316, 1444
Alw26I GTCTC 2 cut(s) 122, 568
AlwI GGATC 7 cut(s) 113, 126, 179, 192, 670, 1085, 1098
AlwNI CAGNNNCTG 1 cut(s) 737
Ama87I CYCGRG 1 cut(s) 323
Aor51HI AGCGCT 1 cut(s) 746
AoxI GGCC 5 cut(s) 652, 700, 904, 957, 1209
ApeKI GCWGC 6 cut(s) 62, 236, 464, 617, 882, 1313
ApoI RAATTY 3 cut(s) 928, 1283, 1337
AspLEI GCGC 4 cut(s) 261, 375, 747, 843
AsuHPI GGTGA 2 cut(s) 32, 1076
AvaI CYCGRG 1 cut(s) 323
BalI TGGCCA 2 cut(s) 906, 959
BamHI GGATCC 3 cut(s) 118, 184, 1090
BanI GGYRCC 1 cut(s) 808
BanII GRGCYC 1 cut(s) 967
BbvI GCAGC 6 cut(s) 74, 223, 451, 604, 894, 1325
BccI CCATC 4 cut(s) 164, 804, 816, 1398
BceAI ACGGC 2 cut(s) 687, 771
BcgI CGANNNNNNTGC 2 cut(s) 260, 294
BclI TGATCA 2 cut(s) 739, 832
BcoDI GTCTC 2 cut(s) 122, 568
BfaI CTAG 3 cut(s) 650, 698, 1173
BfoI RGCGCY 2 cut(s) 376, 748
BfrI CTTAAG 1 cut(s) 1439
BisI GCNGC 7 cut(s) 63, 237, 421, 465, 618, 883, 1314
BlsI GCNGC 7 cut(s) 64, 238, 422, 466, 619, 884, 1315
BmeRI GACNNNNNGTC 1 cut(s) 1018
BmeT110I CYCGRG 1 cut(s) 323
BmiI GGNNCC 4 cut(s) 120, 186, 810, 1092
BmrI ACTGGG 1 cut(s) 124
BmsI GCATC 5 cut(s) 150, 976, 1300, 1309, 1489
BmuI ACTGGG 1 cut(s) 124
BoxI GACNNNNGTC 1 cut(s) 134
BpuEI CTTGAG 1 cut(s) 590
BsaJI CCNNGG 1 cut(s) 655
BsaWI WCCGGW 1 cut(s) 637
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 489, 519
Bsc4I CCNNNNNNNGG 4 cut(s) 313, 818, 1402, 1418
Bse118I RCCGGY 1 cut(s) 1459
Bse1I ACTGG 3 cut(s) 119, 177, 361
Bse3DI GCAATG 5 cut(s) 220, 283, 929, 1454, 1463
BseDI CCNNGG 1 cut(s) 655
BseGI GGATG 2 cut(s) 827, 1390
BseLI CCNNNNNNNGG 4 cut(s) 313, 818, 1402, 1418
BseMI GCAATG 5 cut(s) 220, 283, 929, 1454, 1463
BseMII CTCAG 3 cut(s) 177, 1109, 1121
BseNI ACTGG 3 cut(s) 119, 177, 361
BseRI GAGGAG 2 cut(s) 151, 672
BseXI GCAGC 6 cut(s) 74, 223, 451, 604, 894, 1325
BsgI GTGCAG 2 cut(s) 450, 712
BshFI GGCC 5 cut(s) 654, 702, 906, 959, 1211
BshNI GGYRCC 1 cut(s) 808
BsiHKCI CYCGRG 1 cut(s) 323
BsiSI CCGG 2 cut(s) 638, 1460
BslFI GGGAC 4 cut(s) 203, 585, 1025, 1141
BslI CCNNNNNNNGG 4 cut(s) 313, 818, 1402, 1418
BsmAI GTCTC 2 cut(s) 122, 568
BsmBI CGTCTC 1 cut(s) 122
BsmFI GGGAC 4 cut(s) 203, 585, 1025, 1141
BsnI GGCC 5 cut(s) 654, 702, 906, 959, 1211
BsoBI CYCGRG 1 cut(s) 323
Bsp1286I GDGCHC 1 cut(s) 967
Bsp143I GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
BspACI CCGC 1 cut(s) 420
BspANI GGCC 5 cut(s) 654, 702, 906, 959, 1211
BspCNI CTCAG 3 cut(s) 176, 1108, 1120
BspHI TCATGA 1 cut(s) 829
BspLI GGNNCC 4 cut(s) 120, 186, 810, 1092
BspPI GGATC 7 cut(s) 113, 126, 179, 192, 670, 1085, 1098
BspQI GCTCTTC 1 cut(s) 536
BspT107I GGYRCC 1 cut(s) 808
BspTI CTTAAG 1 cut(s) 1439
BsrDI GCAATG 5 cut(s) 220, 283, 929, 1454, 1463
BsrFI RCCGGY 1 cut(s) 1459
BsrI ACTGG 3 cut(s) 119, 177, 361
BssAI RCCGGY 1 cut(s) 1459
BssECI CCNNGG 1 cut(s) 655
BssMI GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
Bst4CI ACNGT 4 cut(s) 88, 200, 337, 1132
Bst6I CTCTTC 3 cut(s) 428, 536, 1229
BstAFI CTTAAG 1 cut(s) 1439
BstAPI GCANNNNNTGC 1 cut(s) 849
BstC8I GCNNGC 4 cut(s) 533, 615, 920, 1461
BstDEI CTNAG 5 cut(s) 163, 1080, 1095, 1107, 1213
BstENI CCTNNNNNAGG 1 cut(s) 311
BstF5I GGATG 2 cut(s) 827, 1390
BstH2I RGCGCY 2 cut(s) 376, 748
BstHHI GCGC 4 cut(s) 261, 375, 747, 843
BstKTI GATC 6 cut(s) 121, 187, 665, 742, 835, 1093
BstMAI GTCTC 2 cut(s) 122, 568
BstMBI GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
BstMWI GCNNNNNNNGC 2 cut(s) 849, 1465
BstNSI RCATGY 5 cut(s) 137, 617, 874, 1192, 1480
BstPAI GACNNNNGTC 1 cut(s) 134
BstV1I GCAGC 6 cut(s) 74, 223, 451, 604, 894, 1325
BstX2I RGATCY 4 cut(s) 118, 184, 662, 1090
BstYI RGATCY 4 cut(s) 118, 184, 662, 1090
BsuRI GGCC 5 cut(s) 654, 702, 906, 959, 1211
BtgZI GCGATG 1 cut(s) 1126
BtsCI GGATG 2 cut(s) 827, 1390
BtsI GCAGTG 1 cut(s) 553
BtsIMutI CAGTG 2 cut(s) 205, 553
Cac8I GCNNGC 4 cut(s) 533, 615, 920, 1461
CaiI CAGNNNCTG 1 cut(s) 737
CciI TCATGA 1 cut(s) 829
CfoI GCGC 4 cut(s) 261, 375, 747, 843
Cfr10I RCCGGY 1 cut(s) 1459
CseI GACGC 1 cut(s) 139
Csp6I GTAC 4 cut(s) 295, 937, 1386, 1436
CspCI CAANNNNNGTGG 2 cut(s) 1101, 1136
CviAII CATG 8 cut(s) 134, 390, 614, 830, 871, 980, 1189, 1477
CviQI GTAC 4 cut(s) 295, 937, 1386, 1436
DdeI CTNAG 5 cut(s) 163, 1080, 1095, 1107, 1213
DpnI GATC 6 cut(s) 120, 186, 664, 741, 834, 1092
DpnII GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
DriI GACNNNNNGTC 1 cut(s) 1018
EaeI YGGCCR 2 cut(s) 904, 957
Eam1104I CTCTTC 3 cut(s) 428, 536, 1229
Eam1105I GACNNNNNGTC 1 cut(s) 1018
EarI CTCTTC 3 cut(s) 428, 536, 1229
Eco24I GRGCYC 1 cut(s) 967
Eco32I GATATC 1 cut(s) 225
Eco47III AGCGCT 1 cut(s) 746
Eco88I CYCGRG 1 cut(s) 323
EcoNI CCTNNNNNAGG 1 cut(s) 311
EcoRI GAATTC 1 cut(s) 928
EcoRV GATATC 1 cut(s) 225
EcoT22I ATGCAT 1 cut(s) 1482
EcoT38I GRGCYC 1 cut(s) 967
Esp3I CGTCTC 1 cut(s) 122
FaeI CATG 8 cut(s) 137, 393, 617, 833, 874, 983, 1192, 1480
FalI AAGNNNNNCTT 2 cut(s) 1287, 1319
FaqI GGGAC 4 cut(s) 203, 585, 1025, 1141
FatI CATG 8 cut(s) 133, 389, 613, 829, 870, 979, 1188, 1476
FauNDI CATATG 1 cut(s) 512
FbaI TGATCA 2 cut(s) 739, 832
Fnu4HI GCNGC 7 cut(s) 63, 237, 421, 465, 618, 883, 1314
FokI GGATG 2 cut(s) 834, 1377
FriOI GRGCYC 1 cut(s) 967
Fsp4HI GCNGC 7 cut(s) 63, 237, 421, 465, 618, 883, 1314
FspBI CTAG 3 cut(s) 650, 698, 1173
GlaI GCGC 4 cut(s) 260, 374, 746, 842
GluI GCNGC 7 cut(s) 63, 237, 421, 465, 618, 883, 1314
HaeII RGCGCY 2 cut(s) 376, 748
HaeIII GGCC 5 cut(s) 654, 702, 906, 959, 1211
HapII CCGG 2 cut(s) 638, 1460
HgaI GACGC 1 cut(s) 139
HhaI GCGC 4 cut(s) 261, 375, 747, 843
Hin1II CATG 8 cut(s) 137, 393, 617, 833, 874, 983, 1192, 1480
Hin6I GCGC 4 cut(s) 259, 373, 745, 841
HinP1I GCGC 4 cut(s) 259, 373, 745, 841
HindIII AAGCTT 1 cut(s) 1442
HinfI GANTC 2 cut(s) 413, 1181
HpaII CCGG 2 cut(s) 638, 1460
HphI GGTGA 2 cut(s) 32, 1076
Hpy166II GTNNAC 1 cut(s) 1386
Hpy188I TCNGA 4 cut(s) 52, 406, 1110, 1186
Hpy188III TCNNGA 8 cut(s) 220, 323, 451, 602, 666, 718, 830, 1307
Hpy8I GTNNAC 1 cut(s) 1386
HpyCH4III ACNGT 4 cut(s) 88, 200, 337, 1132
HpyCH4IV ACGT 1 cut(s) 1029
HpyCH4V TGCA 8 cut(s) 62, 467, 613, 729, 922, 989, 1313, 1480
HpyF10VI GCNNNNNNNGC 2 cut(s) 849, 1465
HpyF3I CTNAG 5 cut(s) 163, 1080, 1095, 1107, 1213
HpySE526I ACGT 1 cut(s) 1029
Hsp92II CATG 8 cut(s) 137, 393, 617, 833, 874, 983, 1192, 1480
HspAI GCGC 4 cut(s) 259, 373, 745, 841
KroI GCCGGC 1 cut(s) 1459
KroNI GCCGGC 1 cut(s) 1461
Ksp22I TGATCA 2 cut(s) 739, 832
Kzo9I GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
LguI GCTCTTC 1 cut(s) 536
Lsp1109I GCAGC 6 cut(s) 74, 223, 451, 604, 894, 1325
LweI GCATC 5 cut(s) 150, 976, 1300, 1309, 1489
MaeI CTAG 3 cut(s) 650, 698, 1173
MaeII ACGT 1 cut(s) 1029
MaeIII GTNAC 6 cut(s) 38, 82, 331, 582, 1136, 1238
MalI GATC 6 cut(s) 120, 186, 664, 741, 834, 1092
MboI GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
MflI RGATCY 4 cut(s) 118, 184, 662, 1090
MhlI GDGCHC 1 cut(s) 967
MlsI TGGCCA 2 cut(s) 906, 959
MluCI AATT 9 cut(s) 247, 400, 555, 928, 1218, 1243, 1283, 1337, 1368
MluNI TGGCCA 2 cut(s) 906, 959
MmeI TCCRAC 1 cut(s) 1017
Mox20I TGGCCA 2 cut(s) 906, 959
Mph1103I ATGCAT 1 cut(s) 1482
MroNI GCCGGC 1 cut(s) 1459
MscI TGGCCA 2 cut(s) 906, 959
MseI TTAA 6 cut(s) 107, 456, 791, 1367, 1440, 1543
MslI CAYNNNNRTG 1 cut(s) 984
Msp20I TGGCCA 2 cut(s) 906, 959
MspA1I CMGCKG 1 cut(s) 1316
MspCI CTTAAG 1 cut(s) 1439
MspI CCGG 2 cut(s) 638, 1460
MwoI GCNNNNNNNGC 2 cut(s) 849, 1465
NaeI GCCGGC 1 cut(s) 1461
NdeI CATATG 1 cut(s) 512
NdeII GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
NgoMIV GCCGGC 1 cut(s) 1459
NlaIII CATG 8 cut(s) 137, 393, 617, 833, 874, 983, 1192, 1480
NlaIV GGNNCC 4 cut(s) 120, 186, 810, 1092
NmeAIII GCCGAG 1 cut(s) 680
NmuCI GTSAC 2 cut(s) 38, 82
NsiI ATGCAT 1 cut(s) 1482
NspI RCATGY 5 cut(s) 137, 617, 874, 1192, 1480
PaeI GCATGC 1 cut(s) 617
PagI TCATGA 1 cut(s) 829
PciI ACATGT 1 cut(s) 1188
PciSI GCTCTTC 1 cut(s) 536
PdiI GCCGGC 1 cut(s) 1461
PfeI GAWTC 2 cut(s) 413, 1181
PflMI CCANNNNNTGG 1 cut(s) 818
PkrI GCNGC 7 cut(s) 64, 238, 422, 466, 619, 884, 1315
PscI ACATGT 1 cut(s) 1188
PshAI GACNNNNGTC 1 cut(s) 134
PsiI TTATAA 2 cut(s) 366, 678
PspN4I GGNNCC 4 cut(s) 120, 186, 810, 1092
PstNI CAGNNNCTG 1 cut(s) 737
PsuI RGATCY 4 cut(s) 118, 184, 662, 1090
PvuII CAGCTG 1 cut(s) 1316
RsaI GTAC 4 cut(s) 296, 938, 1387, 1437
RsaNI GTAC 4 cut(s) 295, 937, 1386, 1436
RseI CAYNNNNRTG 1 cut(s) 984
SapI GCTCTTC 1 cut(s) 536
SaqAI TTAA 6 cut(s) 107, 456, 791, 1367, 1440, 1543
SatI GCNGC 7 cut(s) 63, 237, 421, 465, 618, 883, 1314
Sau3AI GATC 6 cut(s) 118, 184, 662, 739, 832, 1090
SduI GDGCHC 1 cut(s) 967
SfaNI GCATC 5 cut(s) 150, 976, 1300, 1309, 1489
SmiMI CAYNNNNRTG 1 cut(s) 984
SmlI CTYRAG 2 cut(s) 569, 1439
SmoI CTYRAG 2 cut(s) 569, 1439
SphI GCATGC 1 cut(s) 617
Sse9I AATT 9 cut(s) 247, 400, 555, 928, 1218, 1243, 1283, 1337, 1368
SsiI CCGC 1 cut(s) 420
SspI AATATT 1 cut(s) 759
SspMI CTAG 3 cut(s) 650, 698, 1173
TaaI ACNGT 4 cut(s) 88, 200, 337, 1132
TaiI ACGT 1 cut(s) 1032
TaqI TCGA 3 cut(s) 90, 799, 1308
TasI AATT 9 cut(s) 247, 400, 555, 928, 1218, 1243, 1283, 1337, 1368
TauI GCSGC 1 cut(s) 423
TfiI GAWTC 2 cut(s) 413, 1181
Tru1I TTAA 6 cut(s) 107, 456, 791, 1367, 1440, 1543
Tru9I TTAA 6 cut(s) 107, 456, 791, 1367, 1440, 1543
TscAI CASTG 2 cut(s) 205, 553
TseFI GTSAC 2 cut(s) 38, 82
TseI GCWGC 6 cut(s) 62, 236, 464, 617, 882, 1313
Tsp45I GTSAC 2 cut(s) 38, 82
TspRI CASTG 2 cut(s) 205, 553
Van91I CCANNNNNTGG 1 cut(s) 818
Vha464I CTTAAG 1 cut(s) 1439
XagI CCTNNNNNAGG 1 cut(s) 311
XapI RAATTY 3 cut(s) 928, 1283, 1337
XceI RCATGY 5 cut(s) 137, 617, 874, 1192, 1480
XcmI CCANNNNNNNNNTGG 3 cut(s) 517, 819, 899
XspI CTAG 3 cut(s) 650, 698, 1173
Zsp2I ATGCAT 1 cut(s) 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.