F plasmid transfer operon protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Raffinose_syn | PF05691 | 7 - 748 | 0.0 | Raffinose synthase or seed imbibition protein Sip1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1395 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1174 |
| Acc65I | GGTACC | 1 cut(s) | 1766 |
| AccB1I | GGYRCC | 2 cut(s) | 137, 1766 |
| AccBSI | CCGCTC | 1 cut(s) | 403 |
| AccII | CGCG | 1 cut(s) | 691 |
| AciI | CCGC | 5 cut(s) | 144, 199, 403, 1463, 1744 |
| AclWI | GGATC | 6 cut(s) | 96, 109, 1349, 1362, 1579, 1735 |
| AcsI | RAATTY | 1 cut(s) | 812 |
| AcuI | CTGAAG | 1 cut(s) | 2195 |
| AcvI | CACGTG | 1 cut(s) | 1610 |
| AcyI | GRCGYC | 2 cut(s) | 138, 683 |
| AdeI | CACNNNGTG | 1 cut(s) | 889 |
| AfaI | GTAC | 5 cut(s) | 759, 926, 1152, 1768, 2182 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 104, 1259, 2225, 2260 |
| AflIII | ACRYGT | 3 cut(s) | 856, 1607, 2001 |
| AjnI | CCWGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1879, 1911 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 359, 391 |
| Alw21I | GWGCWC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| Alw26I | GTCTC | 7 cut(s) | 272, 293, 847, 997, 1160, 1622, 2192 |
| Alw44I | GTGCAC | 1 cut(s) | 604 |
| AlwI | GGATC | 6 cut(s) | 96, 109, 1349, 1362, 1579, 1735 |
| Ama87I | CYCGRG | 1 cut(s) | 425 |
| AoxI | GGCC | 5 cut(s) | 112, 370, 847, 1601, 1990 |
| ApaLI | GTGCAC | 1 cut(s) | 604 |
| ApeKI | GCWGC | 4 cut(s) | 877, 947, 1460, 1478 |
| ApoI | RAATTY | 1 cut(s) | 812 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1016, 1048 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1082 |
| Asp718I | GGTACC | 1 cut(s) | 1766 |
| AspLEI | GCGC | 1 cut(s) | 140 |
| AspS9I | GGNCC | 2 cut(s) | 370, 1558 |
| AsuHPI | GGTGA | 4 cut(s) | 326, 1208, 1835, 2110 |
| AvaI | CYCGRG | 1 cut(s) | 425 |
| AvaII | GGWCC | 1 cut(s) | 1558 |
| BaeGI | GKGCMC | 1 cut(s) | 608 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 916, 949 |
| BamHI | GGATCC | 2 cut(s) | 101, 1354 |
| BanI | GGYRCC | 2 cut(s) | 137, 1766 |
| BanII | GRGCYC | 1 cut(s) | 1935 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1919, 1951 |
| BbrPI | CACGTG | 1 cut(s) | 1610 |
| BbsI | GAAGAC | 1 cut(s) | 163 |
| Bbv12I | GWGCWC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| BbvCI | CCTCAGC | 1 cut(s) | 639 |
| BbvI | GCAGC | 4 cut(s) | 889, 934, 1472, 1490 |
| BceAI | ACGGC | 1 cut(s) | 2071 |
| BciT130I | CCWGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| BcoDI | GTCTC | 7 cut(s) | 272, 293, 847, 997, 1160, 1622, 2192 |
| BfaI | CTAG | 1 cut(s) | 2279 |
| BfmI | CTRYAG | 1 cut(s) | 528 |
| BfoI | RGCGCY | 1 cut(s) | 141 |
| BglII | AGATCT | 1 cut(s) | 2099 |
| BisI | GCNGC | 4 cut(s) | 878, 948, 1461, 1479 |
| BlsI | GCNGC | 4 cut(s) | 879, 949, 1462, 1480 |
| Bme1390I | CCNGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| Bme18I | GGWCC | 1 cut(s) | 1558 |
| BmeT110I | CYCGRG | 1 cut(s) | 425 |
| BmgT120I | GGNCC | 2 cut(s) | 370, 1558 |
| BmiI | GGNNCC | 5 cut(s) | 103, 139, 1356, 1645, 1768 |
| BmrFI | CCNGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| BmrI | ACTGGG | 2 cut(s) | 937, 1441 |
| BmsI | GCATC | 7 cut(s) | 604, 889, 1078, 1253, 1744, 1755, 1766 |
| BmuI | ACTGGG | 2 cut(s) | 937, 1441 |
| BpiI | GAAGAC | 1 cut(s) | 163 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 827, 859 |
| BpmI | CTGGAG | 5 cut(s) | 81, 296, 386, 1943, 1996 |
| Bpu10I | CCTNAGC | 1 cut(s) | 639 |
| BpuEI | CTTGAG | 3 cut(s) | 1247, 1640, 1937 |
| BsaAI | YACGTR | 2 cut(s) | 478, 1610 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1745 |
| BsaHI | GRCGYC | 2 cut(s) | 138, 683 |
| BsaI | GGTCTC | 2 cut(s) | 272, 293 |
| BsaJI | CCNNGG | 4 cut(s) | 391, 738, 1349, 1408 |
| BsaWI | WCCGGW | 3 cut(s) | 68, 104, 216 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 25, 359, 389, 1128, 1158, 1830, 1860 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 104, 1259, 2225, 2260 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1745 |
| BseBI | CCWGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| BseDI | CCNNGG | 4 cut(s) | 391, 738, 1349, 1408 |
| BseJI | GATNNNNATC | 1 cut(s) | 1745 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 104, 1259, 2225, 2260 |
| BseMII | CTCAG | 4 cut(s) | 630, 858, 2101, 2177 |
| BseSI | GKGCMC | 1 cut(s) | 608 |
| BseXI | GCAGC | 4 cut(s) | 889, 934, 1472, 1490 |
| BseYI | CCCAGC | 2 cut(s) | 920, 1630 |
| BsgI | GTGCAG | 1 cut(s) | 1497 |
| Bsh1236I | CGCG | 1 cut(s) | 691 |
| BshFI | GGCC | 5 cut(s) | 114, 372, 849, 1603, 1992 |
| BshNI | GGYRCC | 2 cut(s) | 137, 1766 |
| BsiHKAI | GWGCWC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| BsiHKCI | CYCGRG | 1 cut(s) | 425 |
| BsiSI | CCGG | 4 cut(s) | 69, 77, 105, 217 |
| BslFI | GGGAC | 2 cut(s) | 694, 2154 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 104, 1259, 2225, 2260 |
| BsmAI | GTCTC | 7 cut(s) | 272, 293, 847, 997, 1160, 1622, 2192 |
| BsmBI | CGTCTC | 1 cut(s) | 2192 |
| BsmFI | GGGAC | 2 cut(s) | 694, 2154 |
| BsnI | GGCC | 5 cut(s) | 114, 372, 849, 1603, 1992 |
| Bso31I | GGTCTC | 2 cut(s) | 272, 293 |
| BsoBI | CYCGRG | 1 cut(s) | 425 |
| Bsp1286I | GDGCHC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| Bsp1407I | TGTACA | 1 cut(s) | 1150 |
| Bsp143I | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| BspACI | CCGC | 5 cut(s) | 144, 199, 403, 1463, 1744 |
| BspANI | GGCC | 5 cut(s) | 114, 372, 849, 1603, 1992 |
| BspCNI | CTCAG | 4 cut(s) | 631, 857, 2100, 2176 |
| BspFNI | CGCG | 1 cut(s) | 691 |
| BspLI | GGNNCC | 5 cut(s) | 103, 139, 1356, 1645, 1768 |
| BspPI | GGATC | 6 cut(s) | 96, 109, 1349, 1362, 1579, 1735 |
| BspQI | GCTCTTC | 1 cut(s) | 1940 |
| BspT107I | GGYRCC | 2 cut(s) | 137, 1766 |
| BspTNI | GGTCTC | 2 cut(s) | 272, 293 |
| BsrBI | CCGCTC | 1 cut(s) | 403 |
| BsrGI | TGTACA | 1 cut(s) | 1150 |
| BssECI | CCNNGG | 4 cut(s) | 391, 738, 1349, 1408 |
| BssMI | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| BssNI | GRCGYC | 2 cut(s) | 138, 683 |
| BssT1I | CCWWGG | 3 cut(s) | 391, 738, 1408 |
| Bst2UI | CCWGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| Bst4CI | ACNGT | 7 cut(s) | 7, 349, 774, 1055, 1706, 1846, 2185 |
| Bst6I | CTCTTC | 2 cut(s) | 1940, 2164 |
| BstACI | GRCGYC | 2 cut(s) | 138, 683 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 776, 1272 |
| BstAUI | TGTACA | 1 cut(s) | 1150 |
| BstBAI | YACGTR | 2 cut(s) | 478, 1610 |
| BstC8I | GCNNGC | 4 cut(s) | 483, 912, 1652, 1994 |
| BstDEI | CTNAG | 4 cut(s) | 639, 844, 2087, 2163 |
| BstDSI | CCRYGG | 1 cut(s) | 1349 |
| BstFNI | CGCG | 1 cut(s) | 691 |
| BstH2I | RGCGCY | 1 cut(s) | 141 |
| BstHHI | GCGC | 1 cut(s) | 140 |
| BstKTI | GATC | 6 cut(s) | 104, 1357, 1543, 1574, 1743, 2102 |
| BstMAI | GTCTC | 7 cut(s) | 272, 293, 847, 997, 1160, 1622, 2192 |
| BstMBI | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 524, 776, 1115, 1229, 1238, 1272, 1561, 1631, 1817 |
| BstNI | CCWGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| BstNSI | RCATGY | 7 cut(s) | 485, 544, 860, 914, 1279, 2005, 2033 |
| BstSCI | CCNGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| BstSFI | CTRYAG | 1 cut(s) | 528 |
| BstSLI | GKGCMC | 1 cut(s) | 608 |
| BstUI | CGCG | 1 cut(s) | 691 |
| BstV1I | GCAGC | 4 cut(s) | 889, 934, 1472, 1490 |
| BstV2I | GAAGAC | 1 cut(s) | 163 |
| BstX2I | RGATCY | 5 cut(s) | 101, 1354, 1571, 1740, 2099 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 824, 1820 |
| BstYI | RGATCY | 5 cut(s) | 101, 1354, 1571, 1740, 2099 |
| BsuRI | GGCC | 5 cut(s) | 114, 372, 849, 1603, 1992 |
| BtgI | CCRYGG | 1 cut(s) | 1349 |
| BtsI | GCAGTG | 1 cut(s) | 972 |
| BtsIMutI | CAGTG | 9 cut(s) | 272, 972, 1287, 1519, 1773, 1905, 1911, 2020, 2095 |
| Cac8I | GCNNGC | 4 cut(s) | 483, 912, 1652, 1994 |
| CfoI | GCGC | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 2 cut(s) | 370, 1558 |
| CseI | GACGC | 3 cut(s) | 247, 691, 2156 |
| CsiI | ACCWGGT | 2 cut(s) | 39, 1594 |
| Csp6I | GTAC | 5 cut(s) | 758, 925, 1151, 1767, 2181 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1996, 2031 |
| CviQI | GTAC | 5 cut(s) | 758, 925, 1151, 1767, 2181 |
| DdeI | CTNAG | 4 cut(s) | 639, 844, 2087, 2163 |
| DinI | GGCGCC | 1 cut(s) | 139 |
| DpnI | GATC | 6 cut(s) | 103, 1356, 1542, 1573, 1742, 2101 |
| DpnII | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| DraIII | CACNNNGTG | 1 cut(s) | 889 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1174 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1174 |
| Eam1104I | CTCTTC | 2 cut(s) | 1940, 2164 |
| EarI | CTCTTC | 2 cut(s) | 1940, 2164 |
| Ecl136II | GAGCTC | 1 cut(s) | 1933 |
| Eco130I | CCWWGG | 3 cut(s) | 391, 738, 1408 |
| Eco147I | AGGCCT | 2 cut(s) | 849, 1992 |
| Eco24I | GRGCYC | 1 cut(s) | 1935 |
| Eco31I | GGTCTC | 2 cut(s) | 272, 293 |
| Eco47I | GGWCC | 1 cut(s) | 1558 |
| Eco53kI | GAGCTC | 1 cut(s) | 1933 |
| Eco57I | CTGAAG | 1 cut(s) | 2195 |
| Eco72I | CACGTG | 1 cut(s) | 1610 |
| Eco88I | CYCGRG | 1 cut(s) | 425 |
| EcoICRI | GAGCTC | 1 cut(s) | 1933 |
| EcoRII | CCWGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| EcoT14I | CCWWGG | 3 cut(s) | 391, 738, 1408 |
| EcoT22I | ATGCAT | 2 cut(s) | 1268, 1759 |
| EcoT38I | GRGCYC | 1 cut(s) | 1935 |
| EgeI | GGCGCC | 1 cut(s) | 139 |
| EheI | GGCGCC | 1 cut(s) | 139 |
| ErhI | CCWWGG | 3 cut(s) | 391, 738, 1408 |
| Esp3I | CGTCTC | 1 cut(s) | 2192 |
| FaqI | GGGAC | 2 cut(s) | 694, 2154 |
| Fnu4HI | GCNGC | 4 cut(s) | 878, 948, 1461, 1479 |
| FriOI | GRGCYC | 1 cut(s) | 1935 |
| Fsp4HI | GCNGC | 4 cut(s) | 878, 948, 1461, 1479 |
| FspBI | CTAG | 1 cut(s) | 2279 |
| GlaI | GCGC | 1 cut(s) | 139 |
| GluI | GCNGC | 4 cut(s) | 878, 948, 1461, 1479 |
| GsaI | CCCAGC | 2 cut(s) | 924, 1634 |
| GsuI | CTGGAG | 5 cut(s) | 81, 296, 386, 1943, 1996 |
| HaeII | RGCGCY | 1 cut(s) | 141 |
| HaeIII | GGCC | 5 cut(s) | 114, 372, 849, 1603, 1992 |
| HapII | CCGG | 4 cut(s) | 69, 77, 105, 217 |
| HgaI | GACGC | 3 cut(s) | 247, 691, 2156 |
| HhaI | GCGC | 1 cut(s) | 140 |
| Hin1I | GRCGYC | 2 cut(s) | 138, 683 |
| Hin6I | GCGC | 1 cut(s) | 138 |
| HinP1I | GCGC | 1 cut(s) | 138 |
| HindIII | AAGCTT | 1 cut(s) | 664 |
| HinfI | GANTC | 4 cut(s) | 329, 437, 1168, 1372 |
| HpaII | CCGG | 4 cut(s) | 69, 77, 105, 217 |
| HphI | GGTGA | 4 cut(s) | 326, 1208, 1835, 2110 |
| Hpy166II | GTNNAC | 8 cut(s) | 49, 475, 606, 734, 1051, 1451, 1672, 2181 |
| Hpy188I | TCNGA | 6 cut(s) | 442, 1203, 1245, 1336, 2053, 2071 |
| Hpy188III | TCNNGA | 5 cut(s) | 427, 560, 1253, 1657, 1866 |
| Hpy8I | GTNNAC | 8 cut(s) | 49, 475, 606, 734, 1051, 1451, 1672, 2181 |
| HpyAV | CCTTC | 5 cut(s) | 311, 365, 588, 758, 2136 |
| HpyCH4III | ACNGT | 7 cut(s) | 7, 349, 774, 1055, 1706, 1846, 2185 |
| HpyCH4IV | ACGT | 2 cut(s) | 477, 1609 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 524, 776, 1115, 1229, 1238, 1272, 1561, 1631, 1817 |
| HpyF3I | CTNAG | 4 cut(s) | 639, 844, 2087, 2163 |
| HpySE526I | ACGT | 2 cut(s) | 477, 1609 |
| Hsp92I | GRCGYC | 2 cut(s) | 138, 683 |
| HspAI | GCGC | 1 cut(s) | 138 |
| KasI | GGCGCC | 1 cut(s) | 137 |
| KpnI | GGTACC | 1 cut(s) | 1770 |
| Kzo9I | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| LguI | GCTCTTC | 1 cut(s) | 1940 |
| LmnI | GCTCC | 6 cut(s) | 767, 961, 1987, 2026, 2071, 2150 |
| Lsp1109I | GCAGC | 4 cut(s) | 889, 934, 1472, 1490 |
| LweI | GCATC | 7 cut(s) | 604, 889, 1078, 1253, 1744, 1755, 1766 |
| MabI | ACCWGGT | 2 cut(s) | 39, 1594 |
| MaeI | CTAG | 1 cut(s) | 2279 |
| MaeII | ACGT | 2 cut(s) | 477, 1609 |
| MaeIII | GTNAC | 4 cut(s) | 7, 631, 1906, 1960 |
| MalI | GATC | 6 cut(s) | 103, 1356, 1542, 1573, 1742, 2101 |
| MbiI | CCGCTC | 1 cut(s) | 403 |
| MboI | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| MboII | GAAGA | 9 cut(s) | 163, 338, 577, 1374, 1750, 1927, 2058, 2094, 2151 |
| MflI | RGATCY | 5 cut(s) | 101, 1354, 1571, 1740, 2099 |
| MhlI | GDGCHC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| MluCI | AATT | 6 cut(s) | 284, 723, 812, 1087, 1589, 1815 |
| Mly113I | GGCGCC | 1 cut(s) | 138 |
| MlyI | GAGTC | 1 cut(s) | 1162 |
| Mph1103I | ATGCAT | 2 cut(s) | 1268, 1759 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1082 |
| MseI | TTAA | 5 cut(s) | 222, 660, 1140, 1914, 2296 |
| MslI | CAYNNNNRTG | 2 cut(s) | 293, 885 |
| MspA1I | CMGCKG | 4 cut(s) | 199, 638, 947, 1463 |
| MspI | CCGG | 4 cut(s) | 69, 77, 105, 217 |
| MspR9I | CCNGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| MvaI | CCWGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| MvnI | CGCG | 1 cut(s) | 691 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 524, 776, 1115, 1229, 1238, 1272, 1561, 1631, 1817 |
| NarI | GGCGCC | 1 cut(s) | 138 |
| NdeII | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| NlaIV | GGNNCC | 5 cut(s) | 103, 139, 1356, 1645, 1768 |
| NmuCI | GTSAC | 3 cut(s) | 7, 631, 1906 |
| NsiI | ATGCAT | 2 cut(s) | 1268, 1759 |
| NspI | RCATGY | 7 cut(s) | 485, 544, 860, 914, 1279, 2005, 2033 |
| PaeI | GCATGC | 2 cut(s) | 485, 914 |
| PaeR7I | CTCGAG | 1 cut(s) | 425 |
| PceI | AGGCCT | 2 cut(s) | 849, 1992 |
| PciI | ACATGT | 2 cut(s) | 856, 2001 |
| PciSI | GCTCTTC | 1 cut(s) | 1940 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1082 |
| PfeI | GAWTC | 3 cut(s) | 329, 437, 1372 |
| PfoI | TCCNGGA | 2 cut(s) | 97, 1920 |
| PkrI | GCNGC | 4 cut(s) | 879, 949, 1462, 1480 |
| PleI | GAGTC | 1 cut(s) | 1162 |
| PluTI | GGCGCC | 1 cut(s) | 141 |
| PmaCI | CACGTG | 1 cut(s) | 1610 |
| PmlI | CACGTG | 1 cut(s) | 1610 |
| PpsI | GAGTC | 1 cut(s) | 1162 |
| Ppu21I | YACGTR | 2 cut(s) | 478, 1610 |
| PscI | ACATGT | 2 cut(s) | 856, 2001 |
| PsiI | TTATAA | 1 cut(s) | 1395 |
| Psp124BI | GAGCTC | 1 cut(s) | 1935 |
| Psp6I | CCWGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| PspCI | CACGTG | 1 cut(s) | 1610 |
| PspFI | CCCAGC | 2 cut(s) | 920, 1630 |
| PspGI | CCWGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| PspN4I | GGNNCC | 5 cut(s) | 103, 139, 1356, 1645, 1768 |
| PspPI | GGNCC | 2 cut(s) | 370, 1558 |
| PsuI | RGATCY | 5 cut(s) | 101, 1354, 1571, 1740, 2099 |
| PvuII | CAGCTG | 2 cut(s) | 638, 947 |
| RsaI | GTAC | 5 cut(s) | 759, 926, 1152, 1768, 2182 |
| RsaNI | GTAC | 5 cut(s) | 758, 925, 1151, 1767, 2181 |
| RseI | CAYNNNNRTG | 2 cut(s) | 293, 885 |
| SacI | GAGCTC | 1 cut(s) | 1935 |
| SapI | GCTCTTC | 1 cut(s) | 1940 |
| SaqAI | TTAA | 5 cut(s) | 222, 660, 1140, 1914, 2296 |
| SatI | GCNGC | 4 cut(s) | 878, 948, 1461, 1479 |
| Sau3AI | GATC | 6 cut(s) | 101, 1354, 1540, 1571, 1740, 2099 |
| Sau96I | GGNCC | 2 cut(s) | 370, 1558 |
| SchI | GAGTC | 1 cut(s) | 1162 |
| ScrFI | CCNGG | 9 cut(s) | 41, 99, 515, 1002, 1220, 1524, 1596, 1764, 1922 |
| SduI | GDGCHC | 6 cut(s) | 93, 608, 772, 1588, 1682, 1935 |
| SexAI | ACCWGGT | 2 cut(s) | 39, 1594 |
| SfaNI | GCATC | 7 cut(s) | 604, 889, 1078, 1253, 1744, 1755, 1766 |
| SfcI | CTRYAG | 1 cut(s) | 528 |
| SfoI | GGCGCC | 1 cut(s) | 139 |
| Sfr274I | CTCGAG | 1 cut(s) | 425 |
| SinI | GGWCC | 1 cut(s) | 1558 |
| SlaI | CTCGAG | 1 cut(s) | 425 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 293, 885 |
| SmlI | CTYRAG | 4 cut(s) | 425, 1226, 1655, 1952 |
| SmoI | CTYRAG | 4 cut(s) | 425, 1226, 1655, 1952 |
| SphI | GCATGC | 2 cut(s) | 485, 914 |
| Sse9I | AATT | 6 cut(s) | 284, 723, 812, 1087, 1589, 1815 |
| SseBI | AGGCCT | 2 cut(s) | 849, 1992 |
| SsiI | CCGC | 5 cut(s) | 144, 199, 403, 1463, 1744 |
| SspDI | GGCGCC | 1 cut(s) | 137 |
| SspMI | CTAG | 1 cut(s) | 2279 |
| SstI | GAGCTC | 1 cut(s) | 1935 |
| StuI | AGGCCT | 2 cut(s) | 849, 1992 |
| StyD4I | CCNGG | 9 cut(s) | 39, 97, 513, 1000, 1218, 1522, 1594, 1762, 1920 |
| StyI | CCWWGG | 3 cut(s) | 391, 738, 1408 |
| TaaI | ACNGT | 7 cut(s) | 7, 349, 774, 1055, 1706, 1846, 2185 |
| TaiI | ACGT | 2 cut(s) | 480, 1612 |
| TaqI | TCGA | 3 cut(s) | 426, 588, 1539 |
| TasI | AATT | 6 cut(s) | 284, 723, 812, 1087, 1589, 1815 |
| TatI | WGTACW | 2 cut(s) | 757, 1150 |
| TfiI | GAWTC | 3 cut(s) | 329, 437, 1372 |
| Tru1I | TTAA | 5 cut(s) | 222, 660, 1140, 1914, 2296 |
| Tru9I | TTAA | 5 cut(s) | 222, 660, 1140, 1914, 2296 |
| TscAI | CASTG | 9 cut(s) | 279, 979, 1294, 1519, 1780, 1905, 1911, 2020, 2095 |
| TseFI | GTSAC | 3 cut(s) | 7, 631, 1906 |
| TseI | GCWGC | 4 cut(s) | 877, 947, 1460, 1478 |
| Tsp45I | GTSAC | 3 cut(s) | 7, 631, 1906 |
| TspDTI | ATGAA | 9 cut(s) | 121, 193, 277, 423, 822, 882, 1094, 1364, 1433 |
| TspGWI | ACGGA | 5 cut(s) | 66, 368, 1275, 1571, 2216 |
| TspRI | CASTG | 9 cut(s) | 279, 979, 1294, 1519, 1780, 1905, 1911, 2020, 2095 |
| VneI | GTGCAC | 1 cut(s) | 604 |
| VpaK11BI | GGWCC | 1 cut(s) | 1558 |
| XapI | RAATTY | 1 cut(s) | 812 |
| XceI | RCATGY | 7 cut(s) | 485, 544, 860, 914, 1279, 2005, 2033 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2020 |
| XhoI | CTCGAG | 1 cut(s) | 425 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1082 |
| XspI | CTAG | 1 cut(s) | 2279 |
| Zsp2I | ATGCAT | 2 cut(s) | 1268, 1759 |